| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 201334 | hypothetical | YPO0421 | putative multi-drug efflux protein Similar to Vibrio cholerae transporter, AcrB/D/F family Vc1757 TR:Q9KR85 (EMBL:AE004253) (1016 aa) fasta scores: E(): 4.3e-157, 40.766% id in 1018 aa, and to Xylella fastidiosa cation efflux system protein Xf2083 TR:Q9PBQ7 (EMBL:AE004023) (1020 aa) fasta scores: E(): 2.1e-106, 30.731% id in 999 aa | genbank | 16120754 | NP_404067.1 | 1028 | 439231 | 442317 | |
| 201335 | hypothetical | YPO0422 | hypothetical protein No significant database hits | genbank | 16120755 | NP_404068.1 | 110 | 442678 | 443010 | |
| 201336 | hypothetical | YPO0423 | hypothetical protein Similar to the C-terminal region of Schizosaccharomyces pombe hypothetical protein C23E6.01 in chromosome II SPBC23E6.01 TR:O60176 (EMBL:AL023287) (240 aa) fasta scores: E(): 4, 32.258% id in 93 aa | genbank | 16120756 | NP_404069.1 | 115 | 443157 | 443504 | |
| 201337 | hypothetical | YPO0424 | putative pectinesterase Similar to Erwinia chrysanthemi pectinesterase A PemA SW:PMEA_ERWCH (P07863) (366 aa) fasta scores: E(): 4.6e-79, 55.249% id in 362 aa, and to Burkholderia solanacearum pectinesterase Pme SW:PME_BURSO (P24791) (396 aa) fasta scores: E(): 9.3e-16, 30.321% id in 343 aa | genbank | 16120757 | NP_404070.1 | 361 | 443813 | 444898 | |
| 201338 | hmsT | hypothetical | YPO0425 | HmsT protein Identical to the previously sequenced Yersinia pestis HmsT protein TR:Q9X5X6 (EMBL:AF129277) (390 aa) fasta scores: E(): 4.6e-148, 100.000% id in 390 aa. HmsT has been shown to be essential for the expression of the hemin storage (Hms+) phenotype | genbank | 16120758 | NP_404071.1 | 390 | 445439 | 446611 |
| 201339 | hypothetical | YPO0426 | hypothetical protein Similar to Escherichia coli hypothetical 8.7 kDa protein in fhuF-leuV intergenic region YjjZ or B4367.1 SW:YJJZ_ECOLI (P55914) (78 aa) fasta scores: E(): 1.5e-11, 49.333% id in 75 aa | genbank | 16120759 | NP_404072.1 | 79 | 446953 | 447192 | |
| 201340 | rsmC | hypothetical | YPO0427 | 16S ribosomal RNA m2G1207 methyltransferase 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit | genbank | 16120760 | NP_404073.1 | 347 | 447705 | 448748 |
| 201341 | holD | hypothetical | YPO0428 | DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB | genbank | 16120761 | NP_404074.1 | 145 | 448861 | 449298 |
| 201342 | rimI | hypothetical | YPO0429 | ribosomal-protein-alanine N-acetyltransferase alanine acetyltransferase that specifically acetylates ribosomal protein S18 | genbank | 16120762 | NP_404075.1 | 147 | 449243 | 449686 |
| 201343 | prfC | hypothetical | YPO0430 | peptide chain release factor 3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2 | genbank | 16120763 | NP_404076.1 | 529 | 449865 | 451454 |
| 201344 | osmY | hypothetical | YPO0431 | osmotically inducible protein Y Similar to Escherichia coli osmotically inducible protein Y OsmY SW:OSMY_ECOLI (P27291) (201 aa) fasta scores: E(): 0, 64.0% id in 203 aa | genbank | 16120764 | NP_404077.1 | 204 | 451781 | 452395 |
| 201345 | hypothetical | YPO0432 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein Pa5482 TR:AAG08867 (EMBL:AE004961) (53 aa) fasta scores: E(): 1.6e-08, 55.8% id in 52 aa | genbank | 16120765 | NP_404078.1 | 53 | 452562 | 452723 | |
| 201346 | hypothetical | YPO0433 | hypothetical protein Similar to Escherichia coli hypothetical protein YjjU SW:YJJU_ECOLI (P39407) (357 aa) fasta scores: E(): 0, 63.5% id in 348 aa, and to Vibrio cholerae hypothetical protein VC2009 TR:Q9KQI9 (EMBL:AE004275) (389 aa) fasta scores: E(): 7.2e-26, 33.3% id in 363 aa | genbank | 16120766 | NP_404079.1 | 423 | 452797 | 454068 | |
| 201347 | hypothetical | YPO0434 | putative metalloenzyme Similar to Escherichia coli putative deoxyribonuclease YjjV SW:YJJV_ECOLI (P39408) (259 aa) fasta scores: E(): 6.7e-67, 64.314% id in 255 aa, and to Pasteurella multocida hypothetical protein PM0942 TR:Q9CM93 (EMBL:AE006134) (263 aa) fasta scores: E(): 7.7e-42, 48.302% id in 265 aa | genbank | 16120767 | NP_404080.1 | 262 | 454105 | 454893 | |
| 201348 | hypothetical | YPO0435 | putative Na+ dependent nucleoside transporter-family protein Similar to Vibrio cholerae NupC family protein Vc2352 TR:Q9KPL5 (EMBL:AE004305) (418 aa) fasta scores: E(): 2.1e-119, 72.340% id in 423 aa, and to Helicobacter pylori J99 putative nucleoside transporter Jhp1106 TR:Q9ZK36 (EMBL:AE001538) (418 aa) fasta scores: E(): 2.7e-74, 57.346% id in 422 aa | genbank | 16120768 | NP_404081.1 | 423 | 455428 | 456699 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201349 | deoC | hypothetical | YPO0436 | deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate | genbank | 16120769 | NP_404082.1 | 265 | 457275 | 458072 |
| 201350 | deoB | hypothetical | YPO0439 | phosphopentomutase catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose | genbank | 16120770 | NP_404083.1 | 407 | 459643 | 460866 |
| 201351 | deoD | hypothetical | YPO0440 | purine nucleoside phosphorylase Catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate | genbank | 16120771 | NP_404084.1 | 239 | 460991 | 461710 |
| 201352 | smp | hypothetical | YPO0441 | hypothetical protein Similar to Escherichia coli hypothetical protein Smp SW:SMP_ECOLI (P18838) (214 aa) fasta scores: E(): 0, 65.7% id in 213 aa | genbank | 16120772 | NP_404085.1 | 233 | 461822 | 462523 |
| 201353 | serB | hypothetical | YPO0442 | phosphoserine phosphatase Similar to Escherichia coli phosphoserine phosphatase SerB SW:SERB_ECOLI (P06862) (322 aa) fasta scores: E(): 0, 75.0% id in 320 aa, and to Haemophilus influenzae phosphoserine phosphatase SerB SW:SERB_HAEIN (P44997) (314 aa) fasta scores: E(): 0, 51.0% id in 304 aa | genbank | 16120773 | NP_404086.1 | 326 | 462755 | 463735 |
| 201354 | radA | hypothetical | YPO0443 | DNA repair protein RadA Similar to Escherichia coli DNA repair protein RadA SW:RADA_ECOLI (P24554) (460 aa) fasta scores: E(): 0, 91.1% id in 460 aa, and to Haemophilus influenzae DNA repair protein RadA SW:RADA_HAEIN (P45266) (458 aa) fasta scores: E(): 0, 79.6% id in 460 aa | genbank | 16120774 | NP_404087.1 | 460 | 463823 | 465205 |
| 201355 | nadR | hypothetical | YPO0444 | nicotinamide-nucleotide adenylyltransferase catalyzes the formation of NAD(+) from nicotinamide ribonucleotide | genbank | 16120775 | NP_404088.1 | 423 | 465364 | 466635 |
| 201356 | hypothetical | YPO0445 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0574 TR:AAG03963 (EMBL:AE004493) (373 aa) fasta scores: E(): 0, 57.0% id in 372 aa, and to Sphingomonas aromaticivorans hypothetical protein TR:O85863 (EMBL:AF079317) (379 aa) fasta scores: E(): 0, 37.0% id in 373 aa | genbank | 16120776 | NP_404089.1 | 376 | 466792 | 467922 | |
| 201357 | hypothetical | YPO0448 | putative lipoprotein Similar to Escherichia coli putative lipoprotein YfiB SW:YFIB_ECOLI (P07021) (160 aa) fasta scores: E(): 2.9e-22, 46.1% id in 154 aa, and to Pseudomonas aeruginosa probable outer membrane lipoprotein Pa1119 TR:AAG04508 (EMBL:AE004542) (168 aa) fasta scores: E(): 4.9e-26, 49.4% id in 168 aa | genbank | 16120777 | NP_404090.1 | 168 | 469914 | 470420 | |
| 201358 | hypothetical | YPO0449 | hypothetical protein Similar to Escherichia coli hypothetical 46.0 kDa protein in aroF-rplS intergenic region YfiN SW:YFIN_ECOLI (P46139) (408 aa) fasta scores: E(): 3.1e-52, 36.524% id in 397 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1120 TR:Q9I4L5 (EMBL:AE004542) (435 aa) fasta scores: E(): 2.6e-86, 55.639% id in 399 aa | genbank | 16120778 | NP_404091.1 | 425 | 470426 | 471703 | |
| 201359 | hypothetical | YPO0450 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein Pa1121 TR:AAG04510 (EMBL:AE004542) (190 aa) fasta scores: E(): 2e-25, 43.2% id in 148 aa, and to Escherichia coli hypothetical 19.0 kDa protein in aroF-rplS intergenic region precursor YfiR SW:YFIR_ECOLI (P76597) (172 aa) fasta scores: E(): 4.8e-16, 36.0% id in 178 aa | genbank | 16120779 | NP_404092.1 | 207 | 471724 | 472347 | |
| 201360 | hypothetical | YPO0451 | putative cation-transporting P-type ATPase Similar to Pseudomonas aeruginosa probable cation-transporting P-type ATPase Pa1429 TR:AAG04818 (EMBL:AE004572) (902 aa) fasta scores: E(): 0, 44.4% id in 899 aa, and to Synechocystis sp cation-transporting ATPase Pma1 SW:ATA1_SYNY3 (P37367) (905 aa) fasta scores: E(): 0, 41.5% id in 867 aa | genbank | 16120780 | NP_404093.1 | 908 | 472722 | 475448 | |
| 201361 | hypothetical | YPO0452 | putative soluble lytic murein transglycosylase Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt SW:SLT_ECOLI (P03810) (645 aa) fasta scores: E(): 0, 63.7% id in 637 aa, and to Vibrio cholerae soluble lytic murein transglycosylase VC0700 TR:Q9KU29 (EMBL:AE004156) (648 aa) fasta scores: E(): 0, 35.1% id in 639 aa | genbank | 16120781 | NP_404094.1 | 639 | 476018 | 477937 | |
| 201362 | trpR | hypothetical | YPO0453 | Trp operon repressor When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription | genbank | 16120782 | NP_404095.1 | 125 | 478188 | 478565 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201363 | hypothetical | YPO0454 | hypothetical protein Similar to Escherichia coli hypothetical protein YjjX SW:YJJX_ECOLI (P39411) (173 aa) fasta scores: E(): 0, 57.6% id in 170 aa, and to Vibrio cholerae hypothetical protein VC0702 TR:Q9KU27 (EMBL:AE004156) (183 aa) fasta scores: E(): 0, 53.9% id in 167 aa | genbank | 16120783 | NP_404096.1 | 180 | 478562 | 479104 | |
| 201364 | gpmB | hypothetical | YPO0455 | phosphoglycerate mutase Catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate | genbank | 16120784 | NP_404097.1 | 215 | 479198 | 479845 |
| 201365 | hypothetical | YPO0456 | putative right origin-binding protein Similar to Escherichia coli right origin-binding protein Rob SW:ROB_ECOLI (P27292) (289 aa) fasta scores: E(): 0, 68.2% id in 289 aa, and to Bacillus halodurans possible transcriptional regulator BH3634 TR:Q9K6U1 (EMBL:AP001519) (300 aa) fasta scores: E(): 1.7e-19, 30.5% id in 311 aa | genbank | 16120785 | NP_404098.1 | 288 | 479842 | 480708 | |
| 201366 | hypothetical | YPO0457 | hypothetical protein Similar to Escherichia coli hypothetical protein CreA SW:CREA_ECOLI (P08367) (157 aa) fasta scores: E(): 0, 78.2% id in 156 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4564 TR:AAG07952 (EMBL:AE004870) (154 aa) fasta scores: E(): 0, 63.9% id in 155 aa | genbank | 16120786 | NP_404099.1 | 155 | 480934 | 481401 | |
| 201367 | arcA | hypothetical | YPO0458 | aerobic respiration control protein Similar to Escherichia coli aerobic respiration control protein ArcA SW:ARCA_ECOLI (P03026) (238 aa) fasta scores: E(): 0, 92.9% id in 238 aa, and to Vibrio cholerae aerobic respiration control protein FexA TR:Q9KPJ9 (EMBL:AE004307) (238 aa) fasta scores: E(): 0, 85.3% id in 238 aa | genbank | 16120787 | NP_404100.1 | 238 | 481575 | 482291 |
| 201368 | thrA | hypothetical | YPO0459 | bifunctional aspartokinase I/homeserine dehydrogenase I multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways | genbank | 16120788 | NP_404101.1 | 819 | 483395 | 485854 |
| 201369 | thrB | hypothetical | YPO0460 | homoserine kinase catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate | genbank | 16120789 | NP_404102.1 | 309 | 485857 | 486786 |
| 201370 | thrC | hypothetical | YPO0461 | threonine synthase catalyzes the formation of L-threonine fromO-phospho-L-homoserine | genbank | 16120790 | NP_404103.1 | 429 | 486790 | 488079 |
| 201371 | hypothetical | YPO0462 | hypothetical protein Similar to Escherichia coli protein YaaA SW:YAAA_ECOLI (P11288) (258 aa) fasta scores: E(): 0, 78.6% id in 257 aa, and to Vibrio cholerae hypothetical protein VC2355 TR:Q9KPL2 (EMBL:AE004305) (257 aa) fasta scores: E(): 0, 65.0% id in 257 aa | genbank | 16120791 | NP_404104.1 | 258 | 488896 | 489672 | |
| 201372 | talB | hypothetical | YPO0463 | transaldolase Maintains the balance of metabolites in the pentose-phosphate pathway | genbank | 16120792 | NP_404105.1 | 317 | 490204 | 491157 |
| 201373 | mogA | hypothetical | YPO0464 | molybdenum cofactor biosynthesis protein forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis | genbank | 16120793 | NP_404106.1 | 195 | 491445 | 492032 |
| 201374 | hypothetical | YPO0465 | putative transport protein Similar to Pseudomonas aeruginosa probable MFS transporter Pa5370 TR:AAG08755 (EMBL:AE004949) (438 aa) fasta scores: E(): 0, 69.2% id in 412 aa, and to Campylobacter jejuni putative transmembrane transport protein Cj0250C TR:Q9PIP5 (EMBL:AL139074) (436 aa) fasta scores: E(): 0, 45.1% id in 419 aa | genbank | 16120794 | NP_404107.1 | 462 | 492160 | 493548 | |
| 201375 | hypothetical | YPO0466 | hypothetical protein No significant database matches. CDS DNA contains low GC content, 35.33% | genbank | 16120795 | NP_404108.1 | 815 | 493618 | 496065 | |
| 201376 | hypothetical | YPO0467 | hypothetical protein Similar to Escherichia coli hypothetical 20.1 kDa protein in mog-htgA intergenic region YaaH or B0010 SW:YAAH_ECOLI (P28695) (188 aa) fasta scores: E(): 0, 73.7% id in 186 aa, and to Vibrio cholerae hypothetical protein Vc0770 TR:Q9KTW0 (EMBL:AE004162) (197 aa) fasta scores: E(): 0, 66.8% id in 184 aa | genbank | 16120796 | NP_404109.1 | 203 | 496354 | 496965 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201377 | dnaK | hypothetical | YPO0468 | molecular chaperone DnaK heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria | genbank | 16120797 | NP_404110.1 | 636 | 497339 | 499249 |
| 201378 | dnaJ | hypothetical | YPO0469 | chaperone protein DnaJ Similar to Escherichia coli chaperone protein DnaJ SW:DNAJ_ECOLI (P08622) (375 aa) fasta scores: E(): 0, 86.5% id in 378 aa, and to Salmonella typhimurium chaperone protein DnaJ SW:DNAJ_SALTY (Q60004) (378 aa) fasta scores: E(): 0, 87.6% id in 379 aa | genbank | 16120798 | NP_404111.1 | 379 | 499361 | 500500 |
| 201379 | nhaA | hypothetical | YPO0470 | sodium-proton antiporter Similar to Escherichia coli sodium-proton antiporter 1 NhaA SW:NHAA_ECOLI (P13738) (388 aa) fasta scores: E(): 0, 65.9% id in 381 aa, and to Vibrio cholerae sodium-proton antiporter affecting protein NhaA TR:O85187 (EMBL:AF051158) (382 aa) fasta scores: E(): 0, 64.3% id in 389 aa | genbank | 16120799 | NP_404112.1 | 394 | 500743 | 501927 |
| 201380 | nhaR | hypothetical | YPO0471 | transcriptional activator protein NhaR Similar to Escherichia coli transcriptional activator protein NhaR SW:NHAR_ECOLI (P10087) (301 aa) fasta scores: E(): 0, 78.5% id in 298 aa, and to Vibrio cholerae transcriptional activator protein NhaR SW:NHAR_VIBCH (P52692) (296 aa) fasta scores: E(): 0, 67.2% id in 296 aa | genbank | 16120800 | NP_404113.1 | 299 | 502057 | 502956 |
| 201381 | rpsT | hypothetical | YPO0472 | 30S ribosomal protein S20 binds directly to the 16S ribosomal RNA | genbank | 16120801 | NP_404114.1 | 87 | 503087 | 503350 |
| 201382 | hypothetical | YPO0473 | hypothetical protein Doubtful CDS. No significant database hits | genbank | 16120802 | NP_404115.1 | 58 | 503372 | 503548 | |
| 201383 | ribF | hypothetical | YPO0474 | hypothetical protein Similar to Escherichia coli riboflavin biosynthesis protein RibF SW:RIBF_ECOLI (P08391) (313 aa) fasta scores: E(): 0, 75.3% id in 312 aa, and to Vibrio cholerae riboflavin kinase/FMN adenylyltransferase VC0681 TR:Q9KU48 (EMBL:AE004154) (322 aa) fasta scores: E(): 0, 64.7% id in 306 aa | genbank | 16120803 | NP_404116.1 | 312 | 503765 | 504703 |
| 201384 | ileS | hypothetical | YPO0475 | isoleucyl-tRNA synthetase catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile) | genbank | 16120804 | NP_404117.1 | 938 | 504735 | 507551 |
| 201385 | lspA | hypothetical | YPO0476 | signal peptidase II lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis | genbank | 16120805 | NP_404118.1 | 169 | 507551 | 508060 |
| 201386 | fkpB | hypothetical | YPO0476a | FKBP-type peptidyl-prolyl cis-trans isomerase Similar to Escherichia coli FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase FkpB SW:FKBX_ECOLI (P22563) (148 aa) fasta scores: E(): 0, 68.8% id in 144 aa, and to Klebsiella pneumoniae FKBP-type peptidyl-propyl cis-trans isomerase SlpA TR:Q9RF46 (EMBL:AF201388) (149 aa) fasta scores: E(): 0, 70.1% id in 144 aa | genbank | 16120806 | NP_404119.1 | 152 | 508128 | 508586 |
| 201387 | lytB | hypothetical | YPO0477 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalzes the conversion 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate | genbank | 16120807 | NP_404120.1 | 317 | 508567 | 509520 |
| 201388 | hypothetical | YPO0478 | hypothetical protein No significant database hits | genbank | 16120808 | NP_404121.1 | 54 | 509549 | 509713 | |
| 201389 | tnp | hypothetical | YPO0479 | transposase for the IS1541 insertion element Similar to Salmonella typhimurium, and Salmonella typhi transposase for insertion sequence IS200 TnpA SW:T200_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 94.1% id in 152 aa. Identical to the Yersinia pseudotuberculosis IS1541 element transposase Tnp TR:Q9X9F5 (EMBL:AJ238014) (152 aa) fasta scores: E(): 0, 100.0% id in 152 aa | genbank | 16120809 | NP_404122.1 | 152 | 509902 | 510360 |
| 201390 | dapB | hypothetical | YPO0480 | dihydrodipicolinate reductase catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis | genbank | 16120810 | NP_404123.1 | 273 | 510813 | 511634 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201391 | carA | hypothetical | YPO0481 | carbamoyl-phosphate synthase small subunit Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate | genbank | 16120811 | NP_404124.1 | 391 | 512107 | 513282 |
| 201392 | carB | hypothetical | YPO0482 | carbamoyl-phosphate synthase large subunit composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate; binds manganese; involved in pyrimidine synthesis | genbank | 16120812 | NP_404125.1 | 1077 | 513298 | 516531 |
| 201393 | hypothetical | YPO0483 | putative LysE type translocator Similar to Escherichia coli threonine efflux protein RhtC SW:RHTC_ECOLI (P27846) (206 aa) fasta scores: E(): 2.9e-17, 31.6% id in 206 aa, and to Bacillus subtilis hypothetical 23.4 kDa protein in aapA-sigV intergenic region YrhP SW:YRHP_BACSU (O05406) (210 aa) fasta scores: E(): 1.2e-19, 34.1% id in 211 aa | genbank | 16120813 | NP_404126.1 | 204 | 516759 | 517373 | |
| 201394 | hypothetical | YPO0484 | hypothetical protein Similar to Escherichia coli hypothetical 30.5 kDa protein in dnaT-bglJ intergenic region YjjP SW:YJJP_ECOLI (P39402) (277 aa) fasta scores: E(): 0, 74.1% id in 251 aa, and to Vibrio cholerae hypothetical protein Vc0438 TR:Q9KUS7 (EMBL:AE004131) (289 aa) fasta scores: E(): 0, 49.4% id in 253 aa | genbank | 16120814 | NP_404127.1 | 266 | 517697 | 518497 | |
| 201395 | hypothetical | YPO0485 | hypothetical protein Similar to Vibrio cholerae hypothetical protein Vc0439 TR:Q9KUS6 (EMBL:AE004131) (161 aa) fasta scores: E(): 0, 60.7% id in 150 aa, and to Escherichia coli protein YjjB SW:YJJB_ECOLI (P18389) (128 aa) fasta scores: E(): 2.6e-26, 73.1% id in 104 aa | genbank | 16120815 | NP_404128.1 | 151 | 518494 | 518949 | |
| 201396 | folA | hypothetical | YPO0486 | dihydrofolate reductase Similar to Escherichia coli dihydrofolate reductase FolA SW:DYR_ECOLI (P00379) (159 aa) fasta scores: E(): 0, 80.5% id in 159 aa, and to Enterobacter aerogenes dihydrofolate reductase FolA SW:DYR_ENTAE (P31074) (159 aa) fasta scores: E(): 0, 80.5% id in 159 aa | genbank | 16120816 | NP_404129.1 | 160 | 519099 | 519581 |
| 201397 | tnp | hypothetical | YPO0487 | transposase for the IS1541 insertion element Similar to Salmonella typhimurium, and Salmonella typhi transposase for insertion sequence IS200 TnpA SW:T200_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 94.1% id in 152 aa. Identical to the Yersinia pseudotuberculosis IS1541 element transposase Tnp TR:Q9X9F5 (EMBL:AJ238014) (152 aa) fasta scores: E(): 0, 100.0% id in 152 aa | genbank | 16120817 | NP_404130.1 | 152 | 519793 | 520251 |
| 201398 | hypothetical | YPO0488 | hypothetical protein No significant database hits | genbank | 16120818 | NP_404131.1 | 73 | 520786 | 521007 | |
| 201399 | hypothetical | YPO0489 | hypothetical protein No significant database matches | genbank | 16120819 | NP_404132.1 | 154 | 521134 | 521598 | |
| 201400 | apaH | hypothetical | YPO0490 | diadenosinetetraphosphatase hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP | genbank | 16120820 | NP_404133.1 | 289 | 521688 | 522557 |
| 201401 | apaG | hypothetical | YPO0491 | hypothetical protein Similar to Salmonella typhimurium ApaG protein SW:APAG_SALTY (Q56017) (125 aa) fasta scores: E(): 0, 72.0% id in 125 aa, and to Escherichia coli ApaG protein SW:APAG_ECOLI (P05636) (125 aa) fasta scores: E(): 0, 72.8% id in 125 aa. The function of ApaG is unknown, however, mutations in apaG/corD give a phenotype of low-level Co2+ resistance. They also decrease Mg2+ efflux but not influx via the CorA Mg2+ transport system | genbank | 16120821 | NP_404134.1 | 125 | 522574 | 522951 |
| 201402 | ksgA | hypothetical | YPO0492 | dimethyladenosine transferase Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'end of 16S rRNA in the 30S particle. Its inactivation leads to kasugamycin resistance | genbank | 16120822 | NP_404135.1 | 272 | 522965 | 523783 |
| 201403 | pdxA | hypothetical | YPO0493 | 4-hydroxythreonine-4-phosphate dehydrogenase Catalyzes the NAD-dependent oxidation of 4-(phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which spontaneously decarboxylate to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) | genbank | 16120823 | NP_404136.1 | 331 | 523776 | 524771 |
| 201404 | surA | hypothetical | YPO0494 | survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) Similar to Escherichia coli survival protein SurA SW:SURA_ECOLI (P21202) (428 aa) fasta scores: E(): 0, 75.4% id in 426 aa, and to Vibrio cholerae survival protein SurA TR:Q9KUS0 (EMBL:AE004131) (431 aa) fasta scores: E(): 0, 45.9% id in 436 aa | genbank | 16120824 | NP_404137.1 | 434 | 524755 | 526059 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201405 | imp | hypothetical | YPO0495 | organic solvent tolerance protein precursor determines N-hexane tolerance and is involved in outer membrane permeability | genbank | 16120825 | NP_404138.1 | 780 | 526127 | 528469 |
| 201406 | djlA | hypothetical | YPO0496 | Dna-J like membrane chaperone protein functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid m | genbank | 16120826 | NP_404139.1 | 277 | 528654 | 529487 |
| 201407 | rluA | hypothetical | YPO0497 | ribosomal large subunit pseudouridine synthase A Similar to Escherichia coli ribosomal large subunit pseudouridine synthase A RluA SW:RLUA_ECOLI (P39219) (218 aa) fasta scores: E(): 0, 77.2% id in 206 aa, and to Haemophilus influenzae ribosomal large subunit pseudouridine synthase A RluA SW:RLUA_HAEIN (P44782) (219 aa) fasta scores: E(): 0, 62.3% id in 204 aa | genbank | 16120827 | NP_404140.1 | 206 | 529785 | 530405 |
| 201408 | hypothetical | YPO0498 | hypothetical protein No significant database hits | genbank | 16120828 | NP_404141.1 | 247 | 531628 | 532371 | |
| 201409 | hypothetical | YPO0499 | hypothetical protein Weakly similar to Pseudomonas aeruginosa hypothetical protein PA0082 TR:AAG03472 (EMBL:AE004447) (344 aa) fasta scores: E(): 0.00022, 22.9% id in 341 aa | genbank | 16120829 | NP_404142.1 | 337 | 532701 | 533714 | |
| 201410 | hypothetical | YPO0500 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0083 TR:AAG03473 (EMBL:AE004447) (172 aa) fasta scores: E(): 0, 59.9% id in 162 aa, and to Edwardsiella ictaluri putative protein EIP20 TR:O52407 (EMBL:AF037441) (170 aa) fasta scores: E(): 2.1e-20, 41.1% id in 163 aa. Similar to YPO2939 (59.3% identity in 162 aa overlap) | genbank | 16120830 | NP_404143.1 | 186 | 533725 | 534285 | |
| 201411 | hypothetical | YPO0501 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0084 TR:AAG03474 (EMBL:AE004447) (498 aa) fasta scores: E(): 0, 63.9% id in 479 aa, and to Edwardsiella ictaluri hypothetical protein EIP55 TR:O52406 (EMBL:AF037441) (495 aa) fasta scores: E(): 0, 46.6% id in 494 aa. Similar to YPO2938 (61.4% identity in 479 aa overlap). | genbank | 16120831 | NP_404144.1 | 503 | 534285 | 535796 | |
| 201412 | hypothetical | YPO0502 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0085 TR:AAG03475 (EMBL:AE004447) (162 aa) fasta scores: E(): 1.5e-15, 38.9% id in 167 aa | genbank | 16120832 | NP_404145.1 | 172 | 535959 | 536477 | |
| 201413 | hypothetical | YPO0503 | hypothetical protein Similar to Edwardsiella ictaluri hypothetical protein eip19 TR:O52404 (EMBL:AF037441) (158 aa) fasta scores: E(): 9.1e-07, 33.6% id in 128 aa, and to Pseudomonas aeruginosa hypothetical protein PA0087 TR:AAG03477 (EMBL:AE004447) (169 aa) fasta scores: E(): 0.0041, 29.9% id in 127 aa | genbank | 16120833 | NP_404146.1 | 147 | 536551 | 536994 | |
| 201414 | hypothetical | YPO0504 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0088 TR:AAG03478 (EMBL:AE004447) (619 aa) fasta scores: E(): 0, 29.0% id in 617 aa | genbank | 16120834 | NP_404147.1 | 614 | 537027 | 538871 | |
| 201415 | hypothetical | YPO0505 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0089 TR:AAG03479 (EMBL:AE004447) (348 aa) fasta scores: E(): 1.2e-22, 28.8% id in 316 aa, and to Pseudomonas aeruginosa hypothetical protein PA2370 TR:AAG05758 (EMBL:AE004663) (338 aa) fasta scores: E(): 3.1e-11, 27.6% id in 301 aa | genbank | 16120835 | NP_404148.1 | 327 | 538864 | 539847 | |
| 201416 | clpB | hypothetical | YPO0506 | putative Clp ATPase Similar to Escherichia coli ClpB protein, which is thought to form part of a multi-chaperone system supressing protein aggregation, SW:CLPB_ECOLI (P03815) (857 aa) fasta scores: E(): 0, 35.1% identity in 883 aa overlap. Also similar to Yersinia enterocolitica Clp protease-associated protein ClpB TR:AAG00524 (EMBL:AF285784) (890 aa) fasta scores: E(): 0, 44.2% id in 866 aa. Contains small internal deletions relative to orthologues. | genbank | 16120836 | NP_404149.1 | 867 | 539850 | 542453 |
| 201417 | hypothetical | YPO0507 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0095 TR:AAG03485 (EMBL:AE004448) (741 aa) fasta scores: E(): 0, 31.5% id in 728 aa, and to Pseudomonas aeruginosa hypothetical protein PA0091 TR:AAG03481 (EMBL:AE004447) (643 aa) fasta scores: E(): 0, 32.7% id in 646 aa | genbank | 16120837 | NP_404150.1 | 782 | 542557 | 544905 | |
| 201418 | hypothetical | YPO0508 | hypothetical protein No significant database hits | genbank | 16120838 | NP_404151.1 | 190 | 544918 | 545490 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201419 | hypothetical | YPO0509 | hypothetical protein Internal region weakly similar to Rickettsia prowazekii hypothetical protein RP563 TR:Q9ZCY8 (EMBL:AJ235272) (588 aa) fasta scores: E(): 0.00013, 21.8% id in 316 aa | genbank | 16120839 | NP_404152.1 | 540 | 545515 | 547137 | |
| 201420 | hypothetical | YPO0510 | hypothetical protein No significant database hits to the full length CDS. Similar to the internal regions of Synechocystis sp hypothetical protein SLR1819 SW:YI19_SYNY3 (P73709) (331 aa) fasta scores: E(): 4.5e-08, 24.1% id in 266 aa, and to Arabidopsis thaliana FH protein interacting protein FIP2 TR:Q9SE95 (EMBL:AF174429) (298 aa) fasta scores: E(): 1e-07, 29.7% id in 155 aa | genbank | 16120840 | NP_404153.1 | 367 | 547163 | 548266 | |
| 201421 | hypothetical | YPO0511 | hypothetical protein No significant database hits | genbank | 16120841 | NP_404154.1 | 205 | 548259 | 548876 | |
| 201422 | hypothetical | YPO0511a | hypothetical protein No significant database hits to the full length CDS. Weakly similar to internal regions of Tetrahymena vorax SUBTRN TR:O00946 (EMBL:AF003090) (258 aa) fasta scores: E(): 3, 28.4% id in 116 aa, and to Xenopus laevis maternal transcription factor OCT-1 TR:Q91809 (EMBL:X57165) (758 aa) fasta scores: E(): 6.1, 24.8% id in 125 aa | genbank | 16120842 | NP_404155.1 | 121 | 548882 | 549247 | |
| 201423 | hypothetical | YPO0512 | putative lipoprotein Similar to N-terminal regions of Pseudomonas aureofaciens copper-containing nitrite reductase precursor NirK SW:NIR_PSEAR (Q06006) (363 aa) fasta scores: E(): 5.2, 25.8% id in 155 aa, and to Pseudomonas aeruginosa hypothetical protein PA0080 TR:AAG03470 (EMBL:AE004447) (154 aa) fasta scores: E(): 0.0001, 30.8% id in 120 aa. Putative N-terminal lipoprotein attachment site. | genbank | 16120843 | NP_404156.1 | 163 | 549240 | 549731 | |
| 201424 | hypothetical | YPO0513 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0079 TR:AAG03469 (EMBL:AE004447) (444 aa) fasta scores: E(): 0, 35.3% id in 445 aa, and to Pseudomonas aeruginosa hypothetical protein PA1667 TR:AAG05056 (EMBL:AE004594) (443 aa) fasta scores: E(): 0, 32.0% id in 450 aa | genbank | 16120844 | NP_404157.1 | 451 | 549851 | 551206 | |
| 201425 | hypothetical | YPO0514 | hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0078 TR:AAG03468 (EMBL:AE004447) (449 aa) fasta scores: E(): 4.5e-09, 28.2% id in 457 aa | genbank | 16120845 | NP_404158.1 | 536 | 551203 | 552813 | |
| 201426 | hypothetical | YPO0515 | hypothetical protein Similar to Legionella pneumophila IcmF protein TR:O54529 (EMBL:Y15044) (973 aa) fasta scores: E(): 8.3e-11, 21.0% id in 1008 aa, and to Pseudomonas aeruginosa hypothetical protein PA0077 TR:AAG03467 (EMBL:AE004446) (1101 aa) fasta scores: E(): 0, 25.5% id in 1114 aa. In Legionella pneumophila, mutations in icmF resulted in a reduction in conjugation frequency. | genbank | 16120846 | NP_404159.1 | 1150 | 552863 | 556315 | |
| 201427 | hypothetical | YPO0516 | hypothetical protein No significant database hits | genbank | 16120847 | NP_404160.1 | 117 | 556337 | 556690 | |
| 201428 | hypothetical | YPO0517 | ATP-dependent helicase HepA Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on | genbank | 16120848 | NP_404161.1 | 968 | 556946 | 559852 | |
| 201429 | hypothetical | YPO0518 | DNA polymerase II has polymerase, DNA-binding and 3'-5' exonuclease activities | genbank | 16120849 | NP_404162.1 | 789 | 560313 | 562682 | |
| 201430 | hypothetical | YPO0519 | putative DedA-family membrane protein Similar to Escherichia coli hypothetical protein YabI SW:YABI_ECOLI (P30149) (254 aa) fasta scores: E(): 0, 58.5% id in 253 aa, and to Buchnera aphidicola (subsp. Acyrthosiphon pisum) hypothetical protein BU139 TR:BAB12857 (EMBL:AP001118) (256 aa) fasta scores: E(): 0, 50.2% id in 255 aa | genbank | 16120850 | NP_404163.1 | 255 | 562878 | 563645 | |
| 201431 | thiQ | hypothetical | YPO0520 | thiamine transport ATP-binding protein Similar to Escherichia coli thiamine ABC transporter, ATP-binding protein ThiQ SW:THIQ_ECOLI (P31548) (232 aa) fasta scores: E(): 0, 62.9% id in 221 aa, and to Vibrio cholerae putative thiamine ABC transporter, ATP-binding protein VC2537 TR:Q9KP42 (EMBL:AE004323) (244 aa) fasta scores: E(): 0, 58.0% id in 207 aa | genbank | 16120851 | NP_404164.1 | 227 | 563714 | 564397 |
| 201432 | thiP | hypothetical | YPO0521 | thiamin ABC transporter membrane component functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine | genbank | 16120852 | NP_404165.1 | 519 | 564411 | 565970 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201433 | hypothetical | YPO0522 | thiamine-binding periplasmic protein Similar to Escherichia coli thiamine ABC transpoter, periplasmic binding protein protein TbpA SW:TBPA_ECOLI (P31550) (327 aa) fasta scores: E(): 0, 72.4% id in 323 aa, and to Vibrio cholerae thiamine ABC transporter, periplasmic thiamin-binding protein VC2539 TR:Q9KP40 (EMBL:AE004323) (330 aa) fasta scores: E(): 0, 68.0% id in 319 aa | genbank | 16120853 | NP_404166.1 | 330 | 565994 | 566986 |