WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= A11B03_CONSENSUS (713 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 4 Sequences : less than 4 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 1080 237 |=========================================================== 6310 843 126 |=============================== 3980 717 184 |============================================== 2510 533 137 |================================== 1580 396 106 |========================== 1000 290 62 |=============== 631 228 38 |========= 398 190 39 |========= 251 151 27 |====== 158 124 17 |==== 100 107 16 |==== 63.1 91 14 |=== 39.8 77 9 |== 25.1 68 2 |: 15.8 66 5 |= >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 61 <<<<<<<<<<<<<<<<< 10.0 61 1 |: 6.31 60 4 |= 3.98 56 3 |: 2.51 53 1 |: 1.58 52 1 |: 1.00 51 1 |: 0.63 50 0 | 0.40 50 2 |: 0.25 48 1 |: 0.16 47 2 |: 0.10 45 1 |: 0.063 44 0 | 0.040 44 0 | 0.025 44 0 | 0.016 44 2 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|10945254|dbj|BAB16915.1|(AP002863) 1-deoxy-d-xylul... +1 756 5.8e-74 1 gi|9801280|emb|CAC03581.1|(AJ297566) putative 1-deoxy... +1 754 9.4e-74 1 gi|4886307|emb|CAB43344.1|(AJ242588) 1-deoxy-d-xylulo... +1 741 2.2e-72 1 gi|12644032|sp|Q9XFS9|DXR_ARATH1-DEOXY-D-XYLULOSE 5-P... +1 741 2.2e-72 1 gi|7621710|gb|AAF65154.1|AF250235_1(AF250235) 1-deoxy... +1 739 3.7e-72 1 gi|9800656|gb|AAD56391.2|AF182287_1(AF182287) 1-deoxy... +1 727 6.8e-71 1 gi|8134417|sp|Q9XES0|DXR_MENPI1-DEOXY-D-XYLULOSE 5-PH... +1 713 2.1e-69 1 gi|2496789|sp|Q55663|DXR_SYNY31-DEOXY-D-XYLULOSE 5-PH... +1 549 5.0e-52 1 gi|6689330|emb|CAB65435.1|(AJ250721) deoxyxylulose 5-... +1 523 2.8e-49 1 gi|10175041|dbj|BAB06140.1|(AP001515) 1-deoxy-d-xylul... +1 363 2.6e-32 1 gi|7801266|emb|CAB91130.1|(AL355913) 1-deoxy-D-xylulo... +1 325 2.7e-28 1 gi|8134413|sp|O84074|DXR_CHLTR1-DEOXY-D-XYLULOSE 5-PH... +1 312 6.5e-27 1 gi|8134416|sp|Q9X5F2|DXR_ZYMMO1-DEOXY-D-XYLULOSE 5-PH... +1 311 8.3e-27 1 gi|6434139|emb|CAB60758.1|(AJ250714) 1-deoxy-D-xylulo... +1 311 8.3e-27 1 gi|11279940|pir||G817121-deoxy-D-xylulose 5-phosphate... +1 311 8.3e-27 1 gi|12722428|gb|AAK04072.1|(AE006235) Dxr [Pasteurella... +1 307 2.2e-26 1 gi|2506592|sp|P45568|DXR_ECOLI1-DEOXY-D-XYLULOSE 5-PH... +1 302 7.4e-26 1 gi|4902914|dbj|BAA77848.1|(D83536) Hypothetical prote... +1 302 7.4e-26 1 gi|12512898|gb|AAG54475.1|AE005193_5(AE005193) putati... +1 302 7.4e-26 1 gi|3913544|sp|O31753|DXR_BACSU1-DEOXY-D-XYLULOSE 5-PH... +1 297 2.5e-25 1 gi|1175511|sp|P44055|DXR_HAEIN1-DEOXY-D-XYLULOSE 5-PH... +1 296 3.2e-25 1 gi|11131983|sp|P57329|DXR_BUCAI1-DEOXY-D-XYLULOSE 5-P... +1 287 2.9e-24 1 gi|11279938|pir||D820991-deoxy-D-xylulose 5-phosphate... +1 285 4.7e-24 1 gi|11347257|pir||E831881-deoxy-d-xylulose 5-phosphate... +1 279 2.0e-23 1 gi|7470980|pir||F753881-deoxy-D-xylulose-5-phosphate ... +1 273 8.8e-23 1 gi|11279943|pir||A812291-deoxy-D-xylulose 5-phosphate... +1 262 1.5e-21 1 gi|11279941|pir||B820001-deoxy-D-xylulose 5-phosphate... +1 262 1.5e-21 1 gi|11279937|pir||H827281-deoxy-D-xylulose 5-phosphate... +1 260 2.7e-21 1 gi|12230984|sp|Q10798|DXR_MYCTU1-DEOXY-D-XYLULOSE 5-P... +1 257 8.4e-21 1 gi|7449536|pir||A70923hypothetical protein Rv2870c - ... +1 257 1.1e-20 1 gi|8134419|sp|Q9Z8J8|DXR_CHLPN1-DEOXY-D-XYLULOSE 5-PH... +1 251 2.2e-20 1 gi|11279939|pir||C815781-deoxy-D-xylulose 5-phosphate... +1 251 2.2e-20 1 gi|8978717|dbj|BAA98553.1|(AP002546) CT071 hypothetic... +1 246 8.6e-20 1 gi|4139260|gb|AAD03739.1|(AF111813) 1-deoxy-D-xylulos... +1 237 2.9e-18 1 gi|11279942|pir||G81278probable 1-deoxy-D-xylulose 5-... +1 223 2.8e-17 1 gi|8134420|sp|Q9ZML6|DXR_HELPJ1-DEOXY-D-XYLULOSE 5-PH... +1 211 7.9e-16 1 gi|8134414|sp|Q9WZZ1|DXR_THEMA1-DEOXY-D-XYLULOSE 5-PH... +1 208 1.9e-15 1 gi|2495695|sp|P56139|DXR_HELPY1-DEOXY-D-XYLULOSE 5-PH... +1 204 4.9e-15 1 gi|3913547|sp|O66722|DXR_AQUAE1-DEOXY-D-XYLULOSE 5-PH... +1 196 4.3e-14 1 gi|11967840|emb|CAC19426.1|(AJ292312) DXP reductoisom... +1 170 7.2e-12 1 gi|8134412|sp|O83610|DXR_TREPA1-DEOXY-D-XYLULOSE 5-PH... +1 162 2.1e-09 1 gi|7449532|pir||C71304conserved hypothetical protein ... +1 162 2.2e-09 1 gi|3341600|emb|CAA13144.1|(AJ231102) z44f [Vibrio cho... +1 88 0.011 1 gi|106253|pir||S18946ultra high-sulfur keratin 1 - hu... +3 71 0.013 2 gi|11250976|pir||E81106probable homoserine dehydrogen... +1 102 0.089 1 gi|7188828|gb|AAF37892.1|(AF238478) histone H3 [Gibbe... -1 79 0.11 1 gi|12736003ref|XP_011969.1| UHS KerB [Homo sapiens] +3 77 0.12 2 gi|5031835ref|NP_005544.1| keratin, cuticle, ultrahig... +3 68 0.18 2 gi|3688513|emb|CAA06655.1|(AJ005663) touB [Pseudomona... +1 75 0.27 1 gi|10567824ref|NP_066384.1| UHS KerB [Homo sapiens] >... +3 77 0.30 2 Locally-aligned regions (HSPs) with respect to query sequence: Locus_ID Frame 3 Hits gi|106253 | ________ _______________ gi|12736003 | __________ ______________ gi|5031835 | ________ _______________ gi|10567824 | __________ _______________ __________________________________________________ Query sequence: | | | | | | 238 0 50 100 150 200 Locus_ID Frame 1 Hits gi|10945254 | _____________________________________ gi|9801280 | _____________________________________ gi|4886307 | _____________________________________ gi|12644032 | _____________________________________ gi|7621710 | _____________________________________ gi|9800656 | _____________________________________ gi|8134417 | _____________________________________ gi|2496789 | _____________________________________ gi|6689330 | _____________________________________ gi|10175041 | ____________________________________ gi|7801266 | ____________________________________ gi|8134413 | ____________________________________ gi|8134416 | ____________________________________ gi|6434139 | ____________________________________ gi|11279940 | ____________________________________ gi|12722428 | _____________________________________ gi|2506592 | ____________________________________ gi|4902914 | ____________________________________ gi|12512898 | ____________________________________ gi|3913544 | ____________________________________ gi|1175511 | _____________________________________ gi|11131983 | ___________________________________ gi|11279938 | ____________________________________ gi|11347257 | _____________________________________ gi|7470980 | _____________________________________ gi|11279943 | ___________________________________ gi|11279941 | ___________________________________ gi|11279937 | ____________________________________ gi|12230984 | ____________________________________ gi|7449536 | ____________________________________ gi|8134419 | ___________________________________ gi|11279939 | ___________________________________ gi|8978717 | ___________________________________ gi|4139260 | ____________________________ gi|11279942 | _________________________________ gi|8134420 | ___________________________________ gi|8134414 | ____________________________________ gi|2495695 | ___________________________________ gi|3913547 | ____________________________________ gi|11967840 | _____________________ gi|8134412 | ____________________ gi|7449532 | ____________________ gi|3341600 | _______________ gi|11250976 | _______________________________ gi|3688513 | ________________ Prosite Hits: _______ __________________________________________________ Query sequence: | | | | | | 238 0 50 100 150 200 __________________ Prosite hits: LEUCINE_ZIPPER Leucine zipper pattern. 36..57 LEUCINE_ZIPPER Leucine zipper pattern. 43..64 __________________ Locus_ID Frame -1 Hits gi|7188828 | Prosite Hits: ____ __________________________________________________ Query sequence: | | | | | | 238 0 50 100 150 200 __________________ Prosite hits: PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid a 158..168 __________________
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WARNING: Descriptions of 11 database sequences were not reported due to the limiting value of parameter V = 50. >gi|10945254|dbj|BAB16915.1| (AP002863) 1-deoxy-d-xylulose-5-phosphate reductoisomerase [Oryza sativa] Length = 473 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 473 0 150 300 450 Plus Strand HSPs: Score = 756 (266.1 bits), Expect = 5.8e-74, P = 5.8e-74 Identities = 152/170 (89%), Positives = 159/170 (93%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD +VVALAAGSNVTLLADQVK FKP+LVAVRNESL+ ELKEAL D + KP Sbjct: 92 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKP 151 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 152 EIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 211 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLAQKH VKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR WPVD Sbjct: 212 PLAQKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVD 261 >gi|9801280|emb|CAC03581.1| (AJ297566) putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Zea mays] Length = 472 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 472 0 150 300 450 Plus Strand HSPs: Score = 754 (265.4 bits), Expect = 9.4e-74, P = 9.4e-74 Identities = 152/170 (89%), Positives = 158/170 (92%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD +VVALAAGSNVTLLADQVK FKP+LVAVRNESL+ ELKEAL D EEKP Sbjct: 91 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCEEKP 150 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 151 EIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 210 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA KH VKILPADSEHSAIFQCIQGL EGAL+R ILTASGGAFR WPVD Sbjct: 211 PLAHKHKVKILPADSEHSAIFQCIQGLSEGALRRIILTASGGAFRDWPVD 260 >gi|4886307|emb|CAB43344.1| (AJ242588) 1-deoxy-d-xylulose-5-phosphate reductoisomerase [Arabidopsis thaliana] Length = 406 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 406 0 150 300 Plus Strand HSPs: Score = 741 (260.8 bits), Expect = 2.2e-72, P = 2.2e-72 Identities = 149/170 (87%), Positives = 159/170 (93%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD +VVALAAGSNVTLLADQV+RFKP LVAVRNESLI ELKEAL D++ K Sbjct: 25 TLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKL 84 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG+IEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 85 EIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 144 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA KHNVKILPADSEHSAIFQCIQGLPEGAL++ ILTASGGAFR WPV+ Sbjct: 145 PLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVE 194 >gi|12644032|sp|Q9XFS9|DXR_ARATH 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, CHLOROPLAST PRECURSOR (DXP REDUCTOISOMERASE) >gi|8131928|gb|AAF73140.1|AF148852_1 (AF148852) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Arabidopsis thaliana] >gi|10177457|dbj|BAB10848.1| (AB009053) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Arabidopsis thaliana] Length = 477 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 477 0 150 300 450 Plus Strand HSPs: Score = 741 (260.8 bits), Expect = 2.2e-72, P = 2.2e-72 Identities = 149/170 (87%), Positives = 159/170 (93%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD +VVALAAGSNVTLLADQV+RFKP LVAVRNESLI ELKEAL D++ K Sbjct: 96 TLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKL 155 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG+IEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 156 EIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 215 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA KHNVKILPADSEHSAIFQCIQGLPEGAL++ ILTASGGAFR WPV+ Sbjct: 216 PLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVE 265 >gi|7621710|gb|AAF65154.1|AF250235_1 (AF250235) 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Catharanthus roseus] Length = 474 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 474 0 150 300 450 Plus Strand HSPs: Score = 739 (260.1 bits), Expect = 3.7e-72, P = 3.7e-72 Identities = 147/170 (86%), Positives = 157/170 (92%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD +VVALAAGSNVTLLADQVK FKPQLV+VRNESL+ ELKEAL DV++KP Sbjct: 93 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPQLVSVRNESLVNELKEALSDVDDKP 152 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG++EV RH DAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAG PFVL Sbjct: 153 EIIPGEQGVVEVVRHSDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGXPFVL 212 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA KH VKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR WPV+ Sbjct: 213 PLAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE 262 >gi|9800656|gb|AAD56391.2|AF182287_1 (AF182287) 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Artemisia annua] Length = 472 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 472 0 150 300 450 Plus Strand HSPs: Score = 727 (255.9 bits), Expect = 6.8e-71, P = 6.8e-71 Identities = 142/170 (83%), Positives = 156/170 (91%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD KVVALAAGSNVTLLA+Q+K FKPQLV+++NESL+AELKEAL + P Sbjct: 90 TLDIVAENPDKFKVVALAAGSNVTLLAEQIKAFKPQLVSIKNESLVAELKEALAGSDYMP 149 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPG++G++EVARHPD V+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 150 EIIPGDEGVVEVARHPDCVTVVTGIVGCAGLKPTVAAIEAGKNIALANKETLIAGGPFVL 209 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA KHNVKILPADSEHSAIFQCIQG PEGAL+R ILTASGGAFR WPV+ Sbjct: 210 PLAHKHNVKILPADSEHSAIFQCIQGFPEGALRRIILTASGGAFRDWPVE 259 >gi|8134417|sp|Q9XES0|DXR_MENPI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, CHLOROPLAST PRECURSOR (DXP REDUCTOISOMERASE) >gi|4581856|gb|AAD24768.1|AF116825_1 (AF116825) 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Mentha x piperita] Length = 475 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 475 0 150 300 450 Plus Strand HSPs: Score = 713 (251.0 bits), Expect = 2.1e-69, P = 2.1e-69 Identities = 145/170 (85%), Positives = 158/170 (92%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDIVAENPD ++VALAAGSNVTLLADQ K FKP+LV+V++ESLI+ELKEAL E+ P Sbjct: 95 TLDIVAENPDKFRIVALAAGSNVTLLADQ-KAFKPKLVSVKDESLISELKEALAGFEDMP 153 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL Sbjct: 154 EIIPGEQGMIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 213 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 PLA+KHNVKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR PV+ Sbjct: 214 PLAKKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVE 263 >gi|2496789|sp|Q55663|DXR_SYNY3 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449527|pir||S76331 hypothetical protein - Synechocystis sp. (strain PCC 6803) >gi|1001556|dbj|BAA10183.1| (D64000) hypothetical protein [Synechocystis sp.] Length = 394 Frame 1 hits (HSPs): ______________________ Annotated Domains: _________ ______________________________________ __________________________________________________ Database sequence: | | | | 394 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 8..15 PRODOM PD186282: DXR(7) 2..66 PRODOM PD010039: DXR(7) 80..379 __________________ Plus Strand HSPs: Score = 549 (193.3 bits), Expect = 5.0e-52, P = 5.0e-52 Identities = 110/171 (64%), Positives = 135/171 (78%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEE-K 228 TLDIV +PD +VV LAAG NV LLA QV F+P++VA+R + +LK A+ ++ + + Sbjct: 18 TLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQ 77 Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408 P + GE+G++EVAR+ DA SVVTGIVGCAGL PT+AAI AGK IALANKETLIAG P V Sbjct: 78 PMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVV 137 Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 LPL +K VK+LPADSEHSAIFQC+QG+PEG L+R ILTASGGAFR PV+ Sbjct: 138 LPLVEKMGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDLPVE 188 >gi|6689330|emb|CAB65435.1| (AJ250721) deoxyxylulose 5-phosphate reductoisomerase [Synechococcus leopoliensis] Length = 402 Frame 1 hits (HSPs): ________________________ __________________________________________________ Database sequence: | | | | 402 0 150 300 Plus Strand HSPs: Score = 523 (184.1 bits), Expect = 2.8e-49, P = 2.8e-49 Identities = 108/180 (60%), Positives = 136/180 (75%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLDI+ + PD ++V LAAG NV LL++Q++R +P++VA+++ + ++EL+ A+ D++ P Sbjct: 17 TLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPP 76 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 I+ GE G+ EVAR+ DA VVTGIVGCAGL PT+AAIEAGK IALANKETLIA GP VL Sbjct: 77 LILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVL 136 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGA----------LKRXILTASGGAFRXWPVD 561 PL QKH V I PADSEHSAIFQCIQGL A L+R +LTASGGAFR WPV+ Sbjct: 137 PLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVE 196 >gi|10175041|dbj|BAB06140.1| (AP001515) 1-deoxy-d-xylulose-5-phosphate reductoisomerase [Bacillus halodurans] Length = 365 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 365 0 150 300 Plus Strand HSPs: Score = 363 (127.8 bits), Expect = 2.6e-32, P = 2.6e-32 Identities = 77/164 (46%), Positives = 107/164 (65%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234 +D++A + D ++VA++ G N+TL +Q+ +FKP LV+V + + K V E Sbjct: 1 MDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSVMTDE---DRKTLASKVPEGTR 57 Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414 ++ GE+G+IEVA A +V ++G GL PT+AAIEA K IALANKETL+ G V Sbjct: 58 VVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTAGHLVTE 117 Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 A++H VK+LP DSEHSAIFQ +QG L R I+TASGG+FR Sbjct: 118 KAREHGVKLLPVDSEHSAIFQALQGERMDRLHRIIITASGGSFR 161 >gi|7801266|emb|CAB91130.1| (AL355913) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Streptomyces coelicolor A3(2)] Length = 418 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 418 0 150 300 Plus Strand HSPs: Score = 325 (114.4 bits), Expect = 2.7e-28, P = 2.7e-28 Identities = 75/166 (45%), Positives = 106/166 (63%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDV---- 219 +D+V NPD +V AL+A G V LLA+Q R K + VAV E ++ L+EAL Sbjct: 40 IDLVLRNPDRFRVTALSANGGRVALLAEQAYRLKARTVAVAREDVVPALREALTAQYGTG 99 Query: 220 EEKPEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGG 399 E PEI+ G + ++A D +V+ GI G GL PT+AA+EAG+ +ALANKE+LI GG Sbjct: 100 EPLPEILAGPEAATQLAAS-DCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGG 158 Query: 400 PFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 P V LA+ +I+P DSEH+A+FQ + +++ ++TASGG FR Sbjct: 159 PLVKALAKPG--QIIPVDSEHAALFQALAAGTRADVRKLVVTASGGPFR 205 >gi|8134413|sp|O84074|DXR_CHLTR 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449535|pir||A71562 hypothetical protein CT071 - Chlamydia trachomatis (serotype D, strain UW3/Cx) >gi|3328465|gb|AAC67662.1| (AE001281) hypothetical protein [Chlamydia trachomatis] Length = 379 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 379 0 150 300 Plus Strand HSPs: Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27 Identities = 68/164 (41%), Positives = 97/164 (59%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 L +V PD + LAA G N L Q++ F P++VAVR E+ EL++ +E Sbjct: 18 LQVVRSIPDTFIIETLAAYGRNQEALISQIREFNPRVVAVREETTYKELRKLFPHIE--- 74 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 I+ GE+G++ VA P + G L +AAI K IALANKE+L+A G V Sbjct: 75 -ILLGEEGLVSVATEPSVTMTIVASSGIDALPAVIAAIRQKKTIALANKESLVAAGELVT 133 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 LA+++ V+ILP DSEH+A+FQC++G +K+ +LTASGG R Sbjct: 134 TLARENGVQILPIDSEHNALFQCLEGRDSSTIKKLLLTASGGPLR 178 >gi|8134416|sp|Q9X5F2|DXR_ZYMMO 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|4768865|gb|AAD29659.1|AF124757_19 (AF124757) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Zymomonas mobilis] Length = 388 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 388 0 150 300 Plus Strand HSPs: Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27 Identities = 70/165 (42%), Positives = 96/165 (58%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD++ N D +V+AL A NV LAD KR + + + SL +LKEAL Sbjct: 20 TLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEAL--AGSSV 77 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E G ++E A A + I+GCAGLK T+AAI GK +ALANKE+L++ G ++ Sbjct: 78 EAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMI 136 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 ++H +LP DSEH+AIFQC ++R I+TASGG FR Sbjct: 137 DAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFR 181 >gi|6434139|emb|CAB60758.1| (AJ250714) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Zymomonas mobilis] Length = 388 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 388 0 150 300 Plus Strand HSPs: Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27 Identities = 70/165 (42%), Positives = 96/165 (58%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD++ N D +V+AL A NV LAD KR + + + SL +LKEAL Sbjct: 20 TLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEAL--AGSSV 77 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E G ++E A A + I+GCAGLK T+AAI GK +ALANKE+L++ G ++ Sbjct: 78 EAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMI 136 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 ++H +LP DSEH+AIFQC ++R I+TASGG FR Sbjct: 137 DAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFR 181 >gi|11279940|pir||G81712 1-deoxy-D-xylulose 5-phosphate reductoisomerase TC0343 [imported] - Chlamydia muridarum (strain Nigg) >gi|7190384|gb|AAF39204.1| (AE002301) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Chlamydia muridarum] Length = 379 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 379 0 150 300 Plus Strand HSPs: Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27 Identities = 75/164 (45%), Positives = 106/164 (64%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 L ++ E PD + LAA G N L Q++ F P++VAVR+E+ EL++ +E Sbjct: 18 LQVIREIPDAFVIETLAAYGRNRESLISQIREFSPRVVAVRDETTYKELRKLFPHIE--- 74 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLK--PTV-AAIEAGKYIALANKETLIAGGP 402 I+ GE+G+I VA A SV IV +G+ P V A+I+ K IALANKE+L+A G Sbjct: 75 -ILSGEEGLIAVAT---AASVDMTIVASSGIDALPAVMASIQERKTIALANKESLVAAGE 130 Query: 403 FVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 V LA+K++V+ILP DSEH+A+FQC++G +K+ ILTASGG R Sbjct: 131 LVTTLAKKNHVQILPIDSEHNALFQCLEGRDPSTIKKLILTASGGPLR 178 >gi|12722428|gb|AAK04072.1| (AE006235) Dxr [Pasteurella multocida] Length = 405 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | 405 0 150 300 Plus Strand HSPs: Score = 307 (108.1 bits), Expect = 2.2e-26, P = 2.2e-26 Identities = 68/180 (37%), Positives = 102/180 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TL ++ NPD +V AL G NV L+ Q F+P A+ ++ L E L + + Sbjct: 23 TLSVITHNPDKYQVFALVGGRNVELMFQQCLTFQPSFAALDDDVAAKMLAEKLKAHQSQT 82 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 ++ G+Q I E+A HP+A V+ IVG AGL PT++A++AGK + LANKE L+ G + Sbjct: 83 TVLAGQQAICELAAHPEADMVMAAIVGAAGLLPTLSAVKAGKRVLLANKEALVTCGQLFI 142 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ-------G---LPEGALKRXILTASGGAFRXWPVD 561 ++ ++LP DSEH+AIFQ + G L E + + +LT SGG FR P++ Sbjct: 143 DAVRESQAQLLPVDSEHNAIFQSLPPEAQRQIGFCPLSELGISKIVLTGSGGPFRYTPLE 202 >gi|2506592|sp|P45568|DXR_ECOLI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449526|pir||E64741 yaeM protein - Escherichia coli >gi|1552750|gb|AAB08602.1| (U70214) hypothetical [Escherichia coli] >gi|1786369|gb|AAC73284.1| (AE000126) putative ATP-binding component of a transport system [Escherichia coli K12] >gi|3434984|dbj|BAA32426.1| (AB013300) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Escherichia coli] Length = 398 Frame 1 hits (HSPs): _______________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 398 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 7..14 PRODOM PD186282: DXR(7) 1..82 PRODOM PD010039: DXR(7) 88..386 PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 112..119 __________________ Plus Strand HSPs: Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26 Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L + Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G + Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136 Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558 ++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+ Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195 >gi|4902914|dbj|BAA77848.1| (D83536) Hypothetical protein in frr 3'region . [Escherichia coli] Length = 398 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | 398 0 150 300 Plus Strand HSPs: Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26 Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L + Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G + Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136 Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558 ++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+ Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195 >gi|12512898|gb|AAG54475.1|AE005193_5 (AE005193) putative ATP-binding component of a transport system [Escherichia coli O157:H7] Length = 398 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | 398 0 150 300 Plus Strand HSPs: Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26 Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L + Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G + Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136 Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558 ++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+ Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195 >gi|3913544|sp|O31753|DXR_BACSU 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449530|pir||B69881 conserved hypothetical protein yluB - Bacillus subtilis >gi|2634027|emb|CAB13528.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis] Length = 388 Frame 1 hits (HSPs): _____________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 388 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 7..14 PRODOM PD186282: DXR(7) 1..67 PRODOM PD010039: DXR(7) 75..355 PRODOM PD136509: DXR_BACSU 357..387 __________________ Plus Strand HSPs: Score = 297 (104.5 bits), Expect = 2.5e-25, P = 2.5e-25 Identities = 68/165 (41%), Positives = 102/165 (61%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD++ + D ++V+++ G N+ ++ F+P+ V+V + +LK+ E Sbjct: 17 TLDVLRAHQDQFQLVSMSFGRNIDKAVPMIEVFQPKFVSVGDLDTYHKLKQMSFSFE--C 74 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 +I GE+G+IE A + VV ++G GL PT+ AIE K IALANKETL+ G V Sbjct: 75 QIGLGEEGLIEAAVMEEVDIVVNALLGSVGLIPTLKAIEQKKTIALANKETLVTAGHIVK 134 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 A+K++V +LP DSEHSAIFQ +QG ++R I+TASGG+FR Sbjct: 135 EHAKKYDVPLLPVDSEHSAIFQALQGEQAKNIERLIITASGGSFR 179 >gi|1175511|sp|P44055|DXR_HAEIN 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|1074518|pir||A64014 conserved hypothetical protein HI0807 - Haemophilus influenzae (strain Rd KW20) >gi|1573819|gb|AAC22466.1| (U32763) conserved hypothetical protein [Haemophilus influenzae Rd] Length = 397 Frame 1 hits (HSPs): _______________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 397 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 9..16 PRODOM PD186282: DXR(7) 4..84 PRODOM PD010039: DXR(7) 86..388 __________________ Plus Strand HSPs: Score = 296 (104.2 bits), Expect = 3.2e-25, P = 3.2e-25 Identities = 67/180 (37%), Positives = 100/180 (55%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TL ++ NP AL G NV + +Q +F+P A+ + + L+E L Sbjct: 19 TLSVIENNPQKYHAFALVGGKNVEAMFEQCIKFRPHFAALDDVNAAKILREKLIAHHIPT 78 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E++ G + I E+A HPDA ++ IVG AGL PT++A++AGK + LANKE+L+ G + Sbjct: 79 EVLAGRRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGKRVLLANKESLVTCGQLFI 138 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ-------G---LPEGALKRXILTASGGAFRXWPVD 561 + + K+LP DSEH+AIFQ + G L E + + ILT SGG FR P++ Sbjct: 139 DAVKNYGSKLLPVDSEHNAIFQSLPPEAQEKIGFCPLSELGVSKIILTGSGGPFRYTPLE 198 >gi|11131983|sp|P57329|DXR_BUCAI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|10038915|dbj|BAB12950.1| (AP001118) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Buchnera sp. APS] Length = 398 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 398 0 150 300 Plus Strand HSPs: Score = 287 (101.0 bits), Expect = 2.9e-24, P = 2.9e-24 Identities = 70/173 (40%), Positives = 100/173 (57%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234 L I+ +NPD KV+AL A N +++ Q + F P VA+R+E L++ L + + Sbjct: 18 LSIIQKNPDLFKVIALVANKNFSIMLRQCELFSPDWVAMRDEKSAHILRKKLKHSKINTQ 77 Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414 ++ GE+ I +A + V++ IVG AGL PT++AI AGK I LANKE+LI G F + Sbjct: 78 VLTGEKDICALAALEETDHVISAIVGMAGLLPTLSAIHAGKTILLANKESLITSGYFFMK 137 Query: 415 LAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAF 543 KI+P DSEH+AIFQ IQ G L + ++K +LT SGG F Sbjct: 138 ALSSSGAKIIPIDSEHNAIFQVLPLEIQKNLGKTTLEKNSIKHLVLTGSGGPF 190 >gi|11279938|pir||D82099 1-deoxy-D-xylulose 5-phosphate reductoisomerase VC2254 [imported] - Vibrio cholerae (group O1 strain N16961) >gi|9656815|gb|AAF95398.1| (AE004297) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Vibrio cholerae] Length = 402 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | 402 0 150 300 Plus Strand HSPs: Score = 285 (100.3 bits), Expect = 4.7e-24, P = 4.7e-24 Identities = 65/175 (37%), Positives = 100/175 (57%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TL ++A+NP +VAL AG NV + ++++P+ + S +EL+ L + Sbjct: 17 TLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASAASELQGLLKNQAMAT 76 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 E++ GE+ + +VA D +V+ IVG AGL PT+AA++AGK + LANKE L+ G + Sbjct: 77 EVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVLLANKEALVMSGQLFI 136 Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFR 546 + +++P DSEH+AIFQC IQ G L + + +LT SGG FR Sbjct: 137 DAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHILLTGSGGPFR 191 >gi|11347257|pir||E83188 1-deoxy-d-xylulose 5-phosphate reductoisomerase PA3650 [imported] - Pseudomonas aeruginosa (strain PAO1) >gi|9664863|gb|AAF97241.1|AF282879_1 (AF282879) 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Dxp reductoisomerase; Dxr [Pseudomonas aeruginosa] >gi|9949811|gb|AAG07038.1|AE004785_2 (AE004785) 1-deoxy-d-xylulose 5-phosphate reductoisomerase [Pseudomonas aeruginosa] Length = 396 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | 396 0 150 300 Plus Strand HSPs: Score = 279 (98.2 bits), Expect = 2.0e-23, P = 2.0e-23 Identities = 65/175 (37%), Positives = 95/175 (54%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V +PD + AL S + L R +P V ++ L+ +L + Sbjct: 20 TLDVVQRHPDRYEAFALTGFSRLAELEALCLRHRPVYAVVPEQAAAIALQGSLAAAGIRT 79 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 ++ GEQ + EVA P+ V+ IVG AGL T+AA+EAGK + LANKE L+ G + Sbjct: 80 RVLFGEQALCEVASAPEVDMVMAAIVGAAGLPSTLAAVEAGKRVLLANKEALVMSGALFM 139 Query: 412 PLAQKHNVKILPADSEHSAIFQCI-----QGLPEGALKRXILTASGGAFRXWPVD 561 ++ +LP DSEH+AIFQ + GL ++R +LTASGG FR P++ Sbjct: 140 QAVKRSGAVLLPIDSEHNAIFQSLPRNYADGLERVGVRRILLTASGGPFRETPLE 194 >gi|7470980|pir||F75388 1-deoxy-D-xylulose-5-phosphate reductoisomerase - Deinococcus radiodurans (strain R1) >gi|6459269|gb|AAF11074.1|AE001994_10 (AE001994) 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Deinococcus radiodurans] Length = 396 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 396 0 150 300 Plus Strand HSPs: Score = 273 (96.1 bits), Expect = 8.8e-23, P = 8.8e-23 Identities = 67/170 (39%), Positives = 96/170 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+ + G V LAAG N+ LLA+QV+ F+P LV+V + S++AE +E L V Sbjct: 19 TLDVARQR--GYTVGTLAAGRNLDLLAEQVREFRPALVSV-DGSILAEARERLSGVRVIA 75 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 + P E + + D V V + G GL PT AA+EAG+ +ALA KE ++ + Sbjct: 76 D--PSEAAVAQA----DVV--VNAMSGLIGLPPTRAALEAGQAVALATKEAMVTSAHLMW 127 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 A +++P DSEH+ ++QC+ G G + ILTASGG FR P D Sbjct: 128 EAAAAGGGRVVPVDSEHTGVYQCLTGEDMGDVAELILTASGGPFRDGPAD 177 >gi|11279943|pir||A81229 1-deoxy-D-xylulose 5-phosphate reductoisomerase NMB0184 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7225403|gb|AAF40641.1| (AE002375) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Neisseria meningitidis MC58] Length = 394 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 394 0 150 300 Plus Strand HSPs: Score = 262 (92.2 bits), Expect = 1.5e-21, P = 1.5e-21 Identities = 63/169 (37%), Positives = 91/169 (53%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V+ +P+ +V ALA V LA Q + F P+ V + A L+ L Sbjct: 19 TLDVVSRHPEKFRVFALAGHKQVEKLAAQCQTFHPEYAVVADAEHAARLEALLKRDGTAT 78 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 +++ G Q +++VA + V+ IVG GL +AA + GK I LANKETL+ G + Sbjct: 79 QVLHGAQALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFM 138 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ----G-LPEGALKRXILTASGGAF 543 A+ + +LP DSEH+A+FQ + G L E + ILTASGG F Sbjct: 139 ETARANGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPF 187 >gi|11279941|pir||B82000 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.-) NMA0083 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7378856|emb|CAB83399.1| (AL162752) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Neisseria meningitidis Z2491] Length = 394 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 394 0 150 300 Plus Strand HSPs: Score = 262 (92.2 bits), Expect = 1.5e-21, P = 1.5e-21 Identities = 63/169 (37%), Positives = 91/169 (53%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD+V+ +P+ +V ALA V LA Q + F P+ V + A L+ L Sbjct: 19 TLDVVSRHPEKFRVFALAGHKQVEKLAAQCQTFHPEYAVVADAEHAARLEALLKRDGTAT 78 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 +++ G Q +++VA + V+ IVG GL +AA + GK I LANKETL+ G + Sbjct: 79 QVLHGAQALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFM 138 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ----G-LPEGALKRXILTASGGAF 543 A+ + +LP DSEH+A+FQ + G L E + ILTASGG F Sbjct: 139 ETARANGAAVLPVDSEHNAVFQVLPRDYTGRLNEHGIASIILTASGGPF 187 >gi|11279937|pir||H82728 1-deoxy-D-xylulose 5-phosphate reductoisomerase XF1048 [imported] - Xylella fastidiosa (strain 9a5c) >gi|9105992|gb|AAF83858.1|AE003942_2 (AE003942) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Xylella fastidiosa] Length = 396 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 396 0 150 300 Plus Strand HSPs: Score = 260 (91.5 bits), Expect = 2.7e-21, P = 2.7e-21 Identities = 60/164 (36%), Positives = 87/164 (53%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234 LD++A +P V LAAG V L ++P + + +L L++ L+ + Sbjct: 22 LDVLARHPRQFHVSLLAAGQRVDALLALCHTYRPDHAVIGDATLYTTLRDGLNAAGLATK 81 Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414 GE + E+ +VV IVG AGL T+AA AGK + LANKE+L+ G ++ Sbjct: 82 AYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLMR 141 Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 A +I+P DSEH+AIFQC++ + R LTASGG FR Sbjct: 142 EASISGAEIIPIDSEHNAIFQCLRSRTTDGVHRITLTASGGPFR 185 >gi|12230984|sp|Q10798|DXR_MYCTU 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) Length = 413 Frame 1 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | 413 0 150 300 Plus Strand HSPs: Score = 257 (90.5 bits), Expect = 8.4e-21, P = 8.4e-21 Identities = 66/166 (39%), Positives = 95/166 (57%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234 L ++A+NPD +VV LAAG L D + R + Q V N ++ E A V + P Sbjct: 29 LQVIADNPDRFEVVGLAAGG-AHL--DTLLRQRAQ-TGVTNIAVADE--HAAQRVGDIP- 81 Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414 G + +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL Sbjct: 82 -YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLR 140 Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXW 552 A+ +I+P DSEHSA+ QC++G + + +LTASGG FR W Sbjct: 141 AARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGW 184 >gi|7449536|pir||A70923 hypothetical protein Rv2870c - Mycobacterium tuberculosis (strain H37RV) >gi|3250701|emb|CAA98375.1| (Z74024) hypothetical protein Rv2870c [Mycobacterium tuberculosis] Length = 436 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | 436 0 150 300 Plus Strand HSPs: Score = 257 (90.5 bits), Expect = 1.1e-20, P = 1.1e-20 Identities = 66/166 (39%), Positives = 95/166 (57%), Frame = +1 Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234 L ++A+NPD +VV LAAG L D + R + Q V N ++ E A V + P Sbjct: 52 LQVIADNPDRFEVVGLAAGG-AHL--DTLLRQRAQ-TGVTNIAVADE--HAAQRVGDIP- 104 Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414 G + +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL Sbjct: 105 -YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLR 163 Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXW 552 A+ +I+P DSEHSA+ QC++G + + +LTASGG FR W Sbjct: 164 AARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGW 207 >gi|8134419|sp|Q9Z8J8|DXR_CHLPN 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449534|pir||B72091 ct071 hypothetical protein - Chlamydophila pneumoniae (strain CWL029) >gi|4376619|gb|AAD18489.1| (AE001618) CT071 hypothetical protein [Chlamydophila pneumoniae CWL029] Length = 379 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 379 0 150 300 Plus Strand HSPs: Score = 251 (88.4 bits), Expect = 2.2e-20, P = 2.2e-20 Identities = 55/162 (33%), Positives = 93/162 (57%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228 TL+IV P K++++A+ G+N+ L Q++ F P AV NE + E + ++ Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQQLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74 Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408 G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132 Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537 A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175 >gi|11279939|pir||C81578 1-deoxy-D-xylulose 5-phosphate reductoisomerase CP0415 [imported] - Chlamydophila pneumoniae (strain AR39) >gi|7189340|gb|AAF38259.1| (AE002203) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Chlamydophila pneumoniae AR39] Length = 379 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 379 0 150 300 Plus Strand HSPs: Score = 251 (88.4 bits), Expect = 2.2e-20, P = 2.2e-20 Identities = 55/162 (33%), Positives = 93/162 (57%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228 TL+IV P K++++A+ G+N+ L Q++ F P AV NE + E + ++ Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQQLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74 Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408 G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132 Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537 A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175 >gi|8978717|dbj|BAA98553.1| (AP002546) CT071 hypothetical protein [Chlamydophila pneumoniae J138] Length = 379 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 379 0 150 300 Plus Strand HSPs: Score = 246 (86.6 bits), Expect = 8.6e-20, P = 8.6e-20 Identities = 54/162 (33%), Positives = 92/162 (56%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228 TL+IV P K++++A+ G+N+ L ++ F P AV NE + E + ++ Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQHLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74 Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408 G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132 Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537 A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175 >gi|4139260|gb|AAD03739.1| (AF111813) 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Plasmodium falciparum] Length = 488 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | | 488 0 150 300 450 Plus Strand HSPs: Score = 237 (83.4 bits), Expect = 2.9e-18, P = 2.9e-18 Identities = 52/133 (39%), Positives = 81/133 (60%), Frame = +1 Query: 91 VVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEE-KPEIIPGEQGIIEV 267 V AL +V L +Q + F P+ + + ++S+ ELKE + ++++ KP I+ G++G+ E+ Sbjct: 109 VKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEI 168 Query: 268 ARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKH-NVKIL 444 +V GI GL T+ AI K +ALANKE++++ G F+ L H N KI+ Sbjct: 169 CSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKII 228 Query: 445 PADSEHSAIFQCI 483 P DSEHSAIFQC+ Sbjct: 229 PVDSEHSAIFQCL 241 >gi|11279942|pir||G81278 probable 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.-) Cj1346c [imported] - Campylobacter jejuni (strain NCTC 11168) >gi|6968780|emb|CAB73773.1| (AL139078) putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Campylobacter jejuni] Length = 356 Frame 1 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | 356 0 150 300 Plus Strand HSPs: Score = 223 (78.5 bits), Expect = 2.8e-17, P = 2.8e-17 Identities = 56/156 (35%), Positives = 87/156 (55%), Frame = +1 Query: 91 VVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGIIEVA 270 + ALA G N+ LL +Q+ RFKP+ V++++ +K HD + G++G+ ++ Sbjct: 25 ISALACGDNIALLNEQIARFKPKFVSIKDSKNKHLVK---HD-----RVFIGQEGLEQIL 76 Query: 271 RHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPA 450 ++ IVG AGLK T+ A E GK IALANKE+L+ G F+ K LP Sbjct: 77 TECQDKLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL------KGAKFLPV 130 Query: 451 DSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPV 558 DSEH+A+ ++G + + +TASGGAF + + Sbjct: 131 DSEHAALKFLLEGKKN--IAKLYITASGGAFYRYKI 164 >gi|8134420|sp|Q9ZML6|DXR_HELPJ 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449528|pir||G71961 hypothetical protein jhp0202 - Helicobacter pylori (strain J99) >gi|4154714|gb|AAD05777.1| (AE001458) putative [Helicobacter pylori J99] Length = 368 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 368 0 150 300 Plus Strand HSPs: Score = 211 (74.3 bits), Expect = 7.9e-16, P = 7.9e-16 Identities = 58/160 (36%), Positives = 90/160 (56%), Frame = +1 Query: 82 GGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGII 261 G K+ AL+ G N+ L+ +Q+K FKP+ VA+ + + + L E L E+ G GI Sbjct: 22 GVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNL-EPLG-----AEVFVGLDGID 75 Query: 262 EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKI 441 + + V+ IVG AGLK + +++ K +ALANKE+L++ G +L ++Q I Sbjct: 76 AMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-HLLDISQ-----I 129 Query: 442 LPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 P DSEH ++ +Q K I++ASGGAFR P+D Sbjct: 130 TPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLD 168 >gi|8134414|sp|Q9WZZ1|DXR_THEMA 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449533|pir||B72321 conserved hypothetical protein - Thermotoga maritima (strain MSB8) >gi|4981424|gb|AAD35970.1|AE001754_7 (AE001754) conserved hypothetical protein [Thermotoga maritima] Length = 376 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | 376 0 150 300 Plus Strand HSPs: Score = 208 (73.2 bits), Expect = 1.9e-15, P = 1.9e-15 Identities = 55/169 (32%), Positives = 97/169 (57%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TLD++ + G +++ ++ SN+ L VK F + VA+ + E +++ +V + Sbjct: 19 TLDVL-KKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGD---VEFEDSSINVWKGS 74 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 I + ++E + PD V + G +GL+ +A++E K + LANKE+L+ GG V Sbjct: 75 HSI---EEMLEALK-PDITMVA--VSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVK 128 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPV 558 ++ +++P DSEHSAIFQ ++ PE +++ +LTASGGA R W + Sbjct: 129 KKLKEKGTELIPVDSEHSAIFQVME--PE--VEKVVLTASGGALRDWKI 173 >gi|2495695|sp|P56139|DXR_HELPY 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449529|pir||H64546 conserved hypothetical protein HP0216 - Helicobacter pylori (strain 26695) >gi|2313306|gb|AAD07284.1| (AE000541) conserved hypothetical protein [Helicobacter pylori 26695] Length = 368 Frame 1 hits (HSPs): _____________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 368 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 4..11 PRODOM PD186282: DXR(7) 2..62 PRODOM PD010039: DXR(7) 64..367 __________________ Plus Strand HSPs: Score = 204 (71.8 bits), Expect = 4.9e-15, P = 4.9e-15 Identities = 56/160 (35%), Positives = 92/160 (57%), Frame = +1 Query: 82 GGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGII 261 G ++ AL+ G N+ L+ +Q++ FKP+ VA+ + S + +L E L E+ G +GI Sbjct: 22 GIEIEALSCGKNIALINEQIQVFKPKKVAILDPSDLNDL-EPLG-----AEVFVGLEGID 75 Query: 262 EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKI 441 + + V+ IVG AGLK + +++ K +ALANKE+L++ G +L ++Q I Sbjct: 76 AMIEECTSNLVLNAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-HLLDISQ-----I 129 Query: 442 LPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561 P DSEH ++ +Q K I++ASGGAFR P++ Sbjct: 130 TPIDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLE 168 >gi|3913547|sp|O66722|DXR_AQUAE 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) >gi|7449531|pir||F70336 conserved hypothetical protein aq_404 - Aquifex aeolicus >gi|2983081|gb|AAC06688.1| (AE000688) hypothetical protein [Aquifex aeolicus] Length = 380 Frame 1 hits (HSPs): ______________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 380 0 150 300 __________________ Annotated Domains: Entrez np-binding site: NADPH (POTENTIAL). 6..13 PRODOM PD186282: DXR(7) 1..66 PRODOM PD010039: DXR(7) 70..370 __________________ Plus Strand HSPs: Score = 196 (69.0 bits), Expect = 4.3e-14, P = 4.3e-14 Identities = 48/165 (29%), Positives = 84/165 (50%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TL + D ++V + A L Q K++KP+ V E KE L + E Sbjct: 16 TLQVYENFRDEIELVGILANRASEKLLQQAKKYKPKYVVSYQEPA----KEWLESLPEGV 71 Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411 + + G++G+ + + + + I G G+KP I+AGK + +NKE+++ G + Sbjct: 72 KYLKGDEGLKAIIEESERL--MNAISGIYGIKPAYEVIKAGKTLLASNKESILCLGEII- 128 Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546 +K+ +++P DSEH+A+FQ + + +K LTASGG F+ Sbjct: 129 ---RKNRERVIPVDSEHNALFQLLSSVKREEVKHVYLTASGGPFK 170 >gi|11967840|emb|CAC19426.1| (AJ292312) DXP reductoisomerase [Klebsiella pneumoniae] Length = 115 Frame 1 hits (HSPs): ____________________________________________ __________________________________________________ Database sequence: | | | | 115 0 50 100 Plus Strand HSPs: Score = 170 (59.8 bits), Expect = 7.2e-12, P = 7.2e-12 Identities = 41/98 (41%), Positives = 57/98 (58%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAE-LKEALHDVEEK 228 TLD+V NP V AL AG NV + +Q F P+ AV +++ AE L+ LH+ + Sbjct: 17 TLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRY-AVMDDAQSAERLRTRLHEHGSR 75 Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAI 345 E++ G+Q EVA + V+ IVG AGL PT+AAI Sbjct: 76 TEVLSGQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAI 114 >gi|8134412|sp|O83610|DXR_TREPA 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXP REDUCTOISOMERASE) Length = 376 Frame 1 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | 376 0 150 300 Plus Strand HSPs: Score = 162 (57.0 bits), Expect = 2.1e-09, P = 2.1e-09 Identities = 36/91 (39%), Positives = 54/91 (59%), Frame = +1 Query: 280 DAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPADSE 459 +A VV GI G AGL ++ ++ +ALANKE+++ + A++ I+P DSE Sbjct: 79 EAEVVVNGIAGAAGLFASLEVLKTRCTLALANKESVVLAASLLHAAARESGATIVPVDSE 138 Query: 460 HSAIFQCIQGLPEGALKRXILTASGGAFRXW 552 H+AIFQ I A+ + +LTASGG FR + Sbjct: 139 HAAIFQLIAAHGAHAVAQVVLTASGGPFRTF 169 >gi|7449532|pir||C71304 conserved hypothetical protein TP0601 - syphilis spirochete >gi|3322895|gb|AAC65574.1| (AE001235) conserved hypothetical protein [Treponema pallidum] Length = 383 Frame 1 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 383 0 150 300 Plus Strand HSPs: Score = 162 (57.0 bits), Expect = 2.2e-09, P = 2.2e-09 Identities = 36/91 (39%), Positives = 54/91 (59%), Frame = +1 Query: 280 DAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPADSE 459 +A VV GI G AGL ++ ++ +ALANKE+++ + A++ I+P DSE Sbjct: 86 EAEVVVNGIAGAAGLFASLEVLKTRCTLALANKESVVLAASLLHAAARESGATIVPVDSE 145 Query: 460 HSAIFQCIQGLPEGALKRXILTASGGAFRXW 552 H+AIFQ I A+ + +LTASGG FR + Sbjct: 146 HAAIFQLIAAHGAHAVAQVVLTASGGPFRTF 176 >gi|3341600|emb|CAA13144.1| (AJ231102) z44f [Vibrio cholerae] Length = 94 Frame 1 hits (HSPs): ____________________________________ __________________________________________________ Database sequence: | | | | | | 94 0 20 40 60 80 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.012, P = 0.011 Identities = 19/67 (28%), Positives = 37/67 (55%), Frame = +1 Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231 TL ++A+NP +VAL AG NV + ++++P+ + S +EL+ L + Sbjct: 17 TLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASAASELQGLLKNQAMAT 76 Query: 232 EIIPGEQ 252 E++ G++ Sbjct: 77 ELLYGKK 83 >gi|106253|pir||S18946 ultra high-sulfur keratin 1 - human >gi|32472|emb|CAA45283.1| (X63755) high-sulpher keratin [Homo sapiens] Length = 169 Frame 3 hits (HSPs): _____________ ____________________________ Annotated Domains: ________________ ______________ __________________________________________________ Database sequence: | | | | | 169 0 50 100 150 __________________ Annotated Domains: PROSITE VWFC: VWFC domain signature. 106..150 PROSITE VWFC: VWFC domain signature. 36..86 PROSITE VWFC: VWFC domain signature. 36..88 __________________ Plus Strand HSPs: Score = 71 (25.0 bits), Expect = 0.013, Sum P(2) = 0.013 Identities = 17/39 (43%), Positives = 17/39 (43%), Frame = +3 Query: 63 CGRESRWGESCGTC--SWFKCYSSCRP-GKKI*ASTCCC 170 CG G SCG C S C S CR G A CCC Sbjct: 4 CGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVCCC 42 Score = 68 (23.9 bits), Expect = 0.013, Sum P(2) = 0.013 Identities = 20/65 (30%), Positives = 27/65 (41%), Frame = +3 Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431 G+ GC S CSQCS C + S C + + Q C + CSSS + Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ--CSCCKPCCSSSGRGSS 124 Query: 432 CKNTS 446 C +S Sbjct: 125 CCQSS 129 Score = 67 (23.6 bits), Expect = 0.017, Sum P(2) = 0.017 Identities = 20/59 (33%), Positives = 25/59 (42%), Frame = +3 Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRS--REIHSFSQQRDIDCWRSFCSSSCSEA*C 434 C P CSQCS C + +SCC S + S S C S C CS++ C Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRC 159 Score = 65 (22.9 bits), Expect = 0.027, Sum P(2) = 0.026 Identities = 20/59 (33%), Positives = 24/59 (40%), Frame = +3 Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA*CKN 440 C P CSQCS C + +SCC S S C S C SSC + C Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSS---GCGSSCCQSSCCKPCCSQ 156 Query: 441 T 443 + Sbjct: 157 S 157 >gi|11250976|pir||E81106 probable homoserine dehydrogenase (EC 1.1.1.3) NMA1395 [imported] - Neisseria meningitidis (group B strain MD58, group A strain Z2491) >gi|7226467|gb|AAF41609.1| (AE002471) homoserine dehydrogenase [Neisseria meningitidis MC58] >gi|7380055|emb|CAB84636.1| (AL162755) putative homoserine dehydrogenase [Neisseria meningitidis Z2491] Length = 435 Frame 1 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | 435 0 150 300 Plus Strand HSPs: Score = 102 (35.9 bits), Expect = 0.093, P = 0.089 Identities = 42/142 (29%), Positives = 64/142 (45%), Frame = +1 Query: 109 GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGI---IEVARHP 279 G +L D + +L S + +L E E+ + P + E+ Sbjct: 16 GGTAAVLRDNAEEISRRLGREIRISAVCDLSE-----EKARQTCPSAAFVKDPFELVARE 70 Query: 280 DAVSVVTGIVGCAGL-KPTVA-AIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPAD 453 D V VV + G G+ K V AIE GK+I ANK+ L G + PLA+K NV I+ + Sbjct: 71 D-VDVVVELFGGTGIAKDAVLKAIENGKHIVTANKKLLAEYGNEIFPLAEKQNV-IVQFE 128 Query: 454 SEHSAIFQCIQGLPEGALKRXILTASG 534 + + I+ L EG I + +G Sbjct: 129 AAVAGGIPIIKALREGLAANRIKSIAG 155 >gi|7188828|gb|AAF37892.1| (AF238478) histone H3 [Gibberella circinata] Length = 105 Frame -1 hits (HSPs): _________________________________________ __________________________________________________ Database sequence: | | | | | | | 105 0 20 40 60 80 100 Minus Strand HSPs: Score = 79 (27.8 bits), Expect = 0.12, P = 0.11 Identities = 27/86 (31%), Positives = 39/86 (45%), Frame = -1 Query: 254 PCSPGMISGFSSTSCKASLSSAIRD--SFLTATS*GLNLFTWSARRVTFEPAASATTFPP 81 P P + ++TS SLS D S L+++S WSAR SA++ PP Sbjct: 18 PHPPEVSRSLTATSLVPSLSVRFDDTRSRLSSSSESSPSSAWSARLPRTSSPISASSLPP 77 Query: 80 SGFSATISSVYKSIQARAEFLQPGDP 3 S S ++SS+ S +R P P Sbjct: 78 SVLSRSLSSLTSSPSSRIPTSVPSTP 103 >gi|12736003 ref|XP_011969.1| UHS KerB [Homo sapiens] Length = 187 Frame 3 hits (HSPs): ____________ __________________ __________________________________________________ Database sequence: | | | | | 187 0 50 100 150 Plus Strand HSPs: Score = 77 (27.1 bits), Expect = 0.12, Sum P(2) = 0.12 Identities = 20/64 (31%), Positives = 27/64 (42%), Frame = +3 Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431 G+ GC S CSQCS C + S C +S Q C CSS C + Sbjct: 75 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSC-CKPCSCSSGCGSSC 133 Query: 432 CKNT 443 C+++ Sbjct: 134 CQSS 137 Score = 53 (18.7 bits), Expect = 0.12, Sum P(2) = 0.12 Identities = 16/43 (37%), Positives = 16/43 (37%), Frame = +3 Query: 63 CGRESRWGESCGTCS--WFKCYSSCRPGKKI*ASTCCC*K*VPNC 191 CG G CG C C SSC CCC VP C Sbjct: 4 CGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCC---VPAC 45 >gi|5031835 ref|NP_005544.1| keratin, cuticle, ultrahigh sulphur 1; Keratin, hair cuticle, ultrahigh-sulfur, 1 [Homo sapiens] >gi|12736001 ref|XP_011968.1| keratin, cuticle, ultrahigh sulphur 1 [Homo sapiens] >gi|125681|sp|P26371|KRUA_HUMAN KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN A (UHS KERATIN A) (UHS KERA) >gi|108020|pir||B36686 ultra-high-sulfur keratin - human >gi|34079|emb|CAA39005.1| (X55293) ultra high-sulphur keratin protein [Homo sapiens] >gi|3228239|emb|CAA07189.1| (AJ006693) ultra high sulfer keratin [Homo sapiens] >gi|227473|prf||1704255A Cys rich protein [Homo sapiens] Length = 169 Frame 3 hits (HSPs): _____________ ____________________________ __________________________________________________ Database sequence: | | | | | 169 0 50 100 150 Plus Strand HSPs: Score = 68 (23.9 bits), Expect = 0.20, Sum P(2) = 0.18 Identities = 20/65 (30%), Positives = 27/65 (41%), Frame = +3 Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431 G+ GC S CSQCS C + S C + + Q C + CSSS + Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ--CSCCKPCCSSSGRGSS 124 Query: 432 CKNTS 446 C +S Sbjct: 125 CCQSS 129 Score = 67 (23.6 bits), Expect = 0.27, Sum P(2) = 0.24 Identities = 20/59 (33%), Positives = 25/59 (42%), Frame = +3 Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRS--REIHSFSQQRDIDCWRSFCSSSCSEA*C 434 C P CSQCS C + +SCC S + S S C S C CS++ C Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRC 159 Score = 65 (22.9 bits), Expect = 0.47, Sum P(2) = 0.37 Identities = 20/59 (33%), Positives = 24/59 (40%), Frame = +3 Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA*CKN 440 C P CSQCS C + +SCC S S C S C SSC + C Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSS---GCGSSCCQSSCCKPCCSQ 156 Query: 441 T 443 + Sbjct: 157 S 157 Score = 60 (21.1 bits), Expect = 0.20, Sum P(2) = 0.18 Identities = 16/39 (41%), Positives = 16/39 (41%), Frame = +3 Query: 63 CGRESRWGESCGTC--SWFKCYSSCRP-GKKI*ASTCCC 170 CG G SCG C S C S CR G A CC Sbjct: 4 CGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCC 42 >gi|3688513|emb|CAA06655.1| (AJ005663) touB [Pseudomonas stutzeri] Length = 86 Frame 1 hits (HSPs): __________________________________________ __________________________________________________ Database sequence: | | | | | | 86 0 20 40 60 80 Plus Strand HSPs: Score = 75 (26.4 bits), Expect = 0.32, P = 0.27 Identities = 23/71 (32%), Positives = 37/71 (52%), Frame = +1 Query: 124 LLADQVKRFKPQLVAVRNESLIAELKE--ALHDVEEKPEIIPGEQGIIEVARHPDAVSVV 297 ++++ + F QLV V E + ++ E A H + + + P + I+ V RH D Sbjct: 6 IMSNFERDFVIQLVPVDTEDTMDQVAEKCAYHSINRR--VHPQPEKILRVRRHEDGTLFP 63 Query: 298 TG-IVGCAGLKPT 333 G IV AGL+PT Sbjct: 64 RGMIVSDAGLRPT 76 >gi|10567824 ref|NP_066384.1| UHS KerB [Homo sapiens] >gi|10720064|sp|O75690|KRUB_HUMAN KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN B (UHS KERATIN B) (UHS KERB) >gi|3228237|emb|CAA07188.1| (AJ006692) ultra high sulfer keratin [Homo sapiens] Length = 194 Frame 3 hits (HSPs): ______________ ____________________ __________________________________________________ Database sequence: | | | | | 194 0 50 100 150 Plus Strand HSPs: Score = 77 (27.1 bits), Expect = 0.36, Sum P(2) = 0.30 Identities = 20/64 (31%), Positives = 27/64 (42%), Frame = +3 Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431 G+ GC S CSQCS C + S C +S Q C CSS C + Sbjct: 82 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSC-CKPCSCSSGCGSSC 140 Query: 432 CKNT 443 C+++ Sbjct: 141 CQSS 144 Score = 73 (25.7 bits), Expect = 1.1, Sum P(2) = 0.68 Identities = 24/73 (32%), Positives = 29/73 (39%), Frame = +3 Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEA-NSCCDRSREIHSFSQQR-------DIDCWRSFC 407 G+ GC S CSQCS C + +SCC S SQ C S C Sbjct: 82 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCC 141 Query: 408 SSSCSEA*CKNTS 446 SSC + C +S Sbjct: 142 QSSCCKPCCSQSS 154 Score = 49 (17.2 bits), Expect = 0.36, Sum P(2) = 0.30 Identities = 13/36 (36%), Positives = 15/36 (41%), Frame = +3 Query: 84 GESCGTCSWFKCYS--SCRPGKKI*ASTCCC*K*VPNC 191 G CG C +C C+P CCC VP C Sbjct: 25 GSGCGGCGSSRCVPICCCKP-------VCCC---VPAC 52 Score = 48 (16.9 bits), Expect = 0.46, Sum P(2) = 0.37 Identities = 13/39 (33%), Positives = 13/39 (33%), Frame = +3 Query: 63 CGRESRWGESCGTCS--WFKCYSSCRP-GKKI*ASTCCC 170 CG G CG C C S C G CCC Sbjct: 4 CGCSGGCGSGCGGCGSGCGGCGSGCGGCGSSRCVPICCC 42 WARNING: HSPs involving 11 database sequences were not reported due to the limiting value of parameter B = 50. Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.98 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.354 0.152 0.634 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.366 0.167 0.574 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.329 0.143 0.456 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.336 0.142 0.459 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.150 0.495 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.145 0.530 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 237 229 10. 78 3 12 22 0.11 35 32 0.12 38 +2 0 237 229 10. 78 3 12 22 0.11 35 32 0.12 38 +1 0 237 229 10. 78 3 12 22 0.11 35 32 0.12 38 -1 0 237 230 10. 78 3 12 22 0.11 35 32 0.097 39 -2 0 237 229 10. 78 3 12 22 0.11 35 32 0.12 38 -3 0 237 229 10. 78 3 12 22 0.11 35 32 0.12 38 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 61 No. of states in DFA: 599 (59 KB) Total size of DFA: 250 KB (256 KB) Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 228.62u 1.16s 229.78t Elapsed: 00:00:39 Total cpu time: 228.68u 1.20s 229.88t Elapsed: 00:00:39 Start: Mon Oct 1 23:35:27 2001 End: Mon Oct 1 23:36:06 2001 WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000