R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 11 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|10945254|dbj|BAB16915.1| (AP002863) 1-deoxy-d-xylulose-5-phosphate
reductoisomerase [Oryza sativa]
Length = 473
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 473
0 150 300 450
Plus Strand HSPs:
Score = 756 (266.1 bits), Expect = 5.8e-74, P = 5.8e-74
Identities = 152/170 (89%), Positives = 159/170 (93%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD +VVALAAGSNVTLLADQVK FKP+LVAVRNESL+ ELKEAL D + KP
Sbjct: 92 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKP 151
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 152 EIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 211
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLAQKH VKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR WPVD
Sbjct: 212 PLAQKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVD 261
>gi|9801280|emb|CAC03581.1| (AJ297566) putative 1-deoxy-D-xylulose 5-phosphate
reductoisomerase [Zea mays]
Length = 472
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 472
0 150 300 450
Plus Strand HSPs:
Score = 754 (265.4 bits), Expect = 9.4e-74, P = 9.4e-74
Identities = 152/170 (89%), Positives = 158/170 (92%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD +VVALAAGSNVTLLADQVK FKP+LVAVRNESL+ ELKEAL D EEKP
Sbjct: 91 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCEEKP 150
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 151 EIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 210
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA KH VKILPADSEHSAIFQCIQGL EGAL+R ILTASGGAFR WPVD
Sbjct: 211 PLAHKHKVKILPADSEHSAIFQCIQGLSEGALRRIILTASGGAFRDWPVD 260
>gi|4886307|emb|CAB43344.1| (AJ242588) 1-deoxy-d-xylulose-5-phosphate
reductoisomerase [Arabidopsis thaliana]
Length = 406
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 406
0 150 300
Plus Strand HSPs:
Score = 741 (260.8 bits), Expect = 2.2e-72, P = 2.2e-72
Identities = 149/170 (87%), Positives = 159/170 (93%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD +VVALAAGSNVTLLADQV+RFKP LVAVRNESLI ELKEAL D++ K
Sbjct: 25 TLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKL 84
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG+IEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 85 EIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 144
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA KHNVKILPADSEHSAIFQCIQGLPEGAL++ ILTASGGAFR WPV+
Sbjct: 145 PLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVE 194
>gi|12644032|sp|Q9XFS9|DXR_ARATH 1-DEOXY-D-XYLULOSE 5-PHOSPHATE
REDUCTOISOMERASE, CHLOROPLAST PRECURSOR (DXP REDUCTOISOMERASE)
>gi|8131928|gb|AAF73140.1|AF148852_1 (AF148852) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Arabidopsis thaliana]
>gi|10177457|dbj|BAB10848.1| (AB009053) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Arabidopsis thaliana]
Length = 477
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 477
0 150 300 450
Plus Strand HSPs:
Score = 741 (260.8 bits), Expect = 2.2e-72, P = 2.2e-72
Identities = 149/170 (87%), Positives = 159/170 (93%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD +VVALAAGSNVTLLADQV+RFKP LVAVRNESLI ELKEAL D++ K
Sbjct: 96 TLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKL 155
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG+IEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 156 EIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 215
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA KHNVKILPADSEHSAIFQCIQGLPEGAL++ ILTASGGAFR WPV+
Sbjct: 216 PLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVE 265
>gi|7621710|gb|AAF65154.1|AF250235_1 (AF250235) 1-deoxy-D-xylulose-5-phosphate
reductoisomerase [Catharanthus roseus]
Length = 474
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 474
0 150 300 450
Plus Strand HSPs:
Score = 739 (260.1 bits), Expect = 3.7e-72, P = 3.7e-72
Identities = 147/170 (86%), Positives = 157/170 (92%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD +VVALAAGSNVTLLADQVK FKPQLV+VRNESL+ ELKEAL DV++KP
Sbjct: 93 TLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPQLVSVRNESLVNELKEALSDVDDKP 152
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG++EV RH DAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAG PFVL
Sbjct: 153 EIIPGEQGVVEVVRHSDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGXPFVL 212
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA KH VKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR WPV+
Sbjct: 213 PLAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE 262
>gi|9800656|gb|AAD56391.2|AF182287_1 (AF182287) 1-deoxy-D-xylulose-5-phosphate
reductoisomerase [Artemisia annua]
Length = 472
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 472
0 150 300 450
Plus Strand HSPs:
Score = 727 (255.9 bits), Expect = 6.8e-71, P = 6.8e-71
Identities = 142/170 (83%), Positives = 156/170 (91%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD KVVALAAGSNVTLLA+Q+K FKPQLV+++NESL+AELKEAL + P
Sbjct: 90 TLDIVAENPDKFKVVALAAGSNVTLLAEQIKAFKPQLVSIKNESLVAELKEALAGSDYMP 149
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPG++G++EVARHPD V+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 150 EIIPGDEGVVEVARHPDCVTVVTGIVGCAGLKPTVAAIEAGKNIALANKETLIAGGPFVL 209
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA KHNVKILPADSEHSAIFQCIQG PEGAL+R ILTASGGAFR WPV+
Sbjct: 210 PLAHKHNVKILPADSEHSAIFQCIQGFPEGALRRIILTASGGAFRDWPVE 259
>gi|8134417|sp|Q9XES0|DXR_MENPI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE
REDUCTOISOMERASE, CHLOROPLAST PRECURSOR (DXP REDUCTOISOMERASE)
>gi|4581856|gb|AAD24768.1|AF116825_1 (AF116825)
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Mentha x piperita]
Length = 475
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 475
0 150 300 450
Plus Strand HSPs:
Score = 713 (251.0 bits), Expect = 2.1e-69, P = 2.1e-69
Identities = 145/170 (85%), Positives = 158/170 (92%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDIVAENPD ++VALAAGSNVTLLADQ K FKP+LV+V++ESLI+ELKEAL E+ P
Sbjct: 95 TLDIVAENPDKFRIVALAAGSNVTLLADQ-KAFKPKLVSVKDESLISELKEALAGFEDMP 153
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
EIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGK IALANKETLIAGGPFVL
Sbjct: 154 EIIPGEQGMIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 213
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
PLA+KHNVKILPADSEHSAIFQCIQGLPEGAL+R ILTASGGAFR PV+
Sbjct: 214 PLAKKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVE 263
>gi|2496789|sp|Q55663|DXR_SYNY3 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449527|pir||S76331 hypothetical protein
- Synechocystis sp. (strain PCC 6803) >gi|1001556|dbj|BAA10183.1|
(D64000) hypothetical protein [Synechocystis sp.]
Length = 394
Frame 1 hits (HSPs): ______________________
Annotated Domains: _________ ______________________________________
__________________________________________________
Database sequence: | | | | 394
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 8..15
PRODOM PD186282: DXR(7) 2..66
PRODOM PD010039: DXR(7) 80..379
__________________
Plus Strand HSPs:
Score = 549 (193.3 bits), Expect = 5.0e-52, P = 5.0e-52
Identities = 110/171 (64%), Positives = 135/171 (78%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEE-K 228
TLDIV +PD +VV LAAG NV LLA QV F+P++VA+R + +LK A+ ++ + +
Sbjct: 18 TLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQ 77
Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408
P + GE+G++EVAR+ DA SVVTGIVGCAGL PT+AAI AGK IALANKETLIAG P V
Sbjct: 78 PMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVV 137
Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
LPL +K VK+LPADSEHSAIFQC+QG+PEG L+R ILTASGGAFR PV+
Sbjct: 138 LPLVEKMGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDLPVE 188
>gi|6689330|emb|CAB65435.1| (AJ250721) deoxyxylulose 5-phosphate
reductoisomerase [Synechococcus leopoliensis]
Length = 402
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 402
0 150 300
Plus Strand HSPs:
Score = 523 (184.1 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 108/180 (60%), Positives = 136/180 (75%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLDI+ + PD ++V LAAG NV LL++Q++R +P++VA+++ + ++EL+ A+ D++ P
Sbjct: 17 TLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPP 76
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
I+ GE G+ EVAR+ DA VVTGIVGCAGL PT+AAIEAGK IALANKETLIA GP VL
Sbjct: 77 LILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVL 136
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGA----------LKRXILTASGGAFRXWPVD 561
PL QKH V I PADSEHSAIFQCIQGL A L+R +LTASGGAFR WPV+
Sbjct: 137 PLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVE 196
>gi|10175041|dbj|BAB06140.1| (AP001515) 1-deoxy-d-xylulose-5-phosphate
reductoisomerase [Bacillus halodurans]
Length = 365
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 365
0 150 300
Plus Strand HSPs:
Score = 363 (127.8 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 77/164 (46%), Positives = 107/164 (65%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234
+D++A + D ++VA++ G N+TL +Q+ +FKP LV+V + + K V E
Sbjct: 1 MDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSVMTDE---DRKTLASKVPEGTR 57
Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414
++ GE+G+IEVA A +V ++G GL PT+AAIEA K IALANKETL+ G V
Sbjct: 58 VVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTAGHLVTE 117
Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
A++H VK+LP DSEHSAIFQ +QG L R I+TASGG+FR
Sbjct: 118 KAREHGVKLLPVDSEHSAIFQALQGERMDRLHRIIITASGGSFR 161
>gi|7801266|emb|CAB91130.1| (AL355913) 1-deoxy-D-xylulose 5-phosphate
reductoisomerase [Streptomyces coelicolor A3(2)]
Length = 418
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 418
0 150 300
Plus Strand HSPs:
Score = 325 (114.4 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 75/166 (45%), Positives = 106/166 (63%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDV---- 219
+D+V NPD +V AL+A G V LLA+Q R K + VAV E ++ L+EAL
Sbjct: 40 IDLVLRNPDRFRVTALSANGGRVALLAEQAYRLKARTVAVAREDVVPALREALTAQYGTG 99
Query: 220 EEKPEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGG 399
E PEI+ G + ++A D +V+ GI G GL PT+AA+EAG+ +ALANKE+LI GG
Sbjct: 100 EPLPEILAGPEAATQLAAS-DCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGG 158
Query: 400 PFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
P V LA+ +I+P DSEH+A+FQ + +++ ++TASGG FR
Sbjct: 159 PLVKALAKPG--QIIPVDSEHAALFQALAAGTRADVRKLVVTASGGPFR 205
>gi|8134413|sp|O84074|DXR_CHLTR 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449535|pir||A71562 hypothetical protein
CT071 - Chlamydia trachomatis (serotype D, strain UW3/Cx)
>gi|3328465|gb|AAC67662.1| (AE001281) hypothetical protein
[Chlamydia trachomatis]
Length = 379
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 379
0 150 300
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 68/164 (41%), Positives = 97/164 (59%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
L +V PD + LAA G N L Q++ F P++VAVR E+ EL++ +E
Sbjct: 18 LQVVRSIPDTFIIETLAAYGRNQEALISQIREFNPRVVAVREETTYKELRKLFPHIE--- 74
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
I+ GE+G++ VA P + G L +AAI K IALANKE+L+A G V
Sbjct: 75 -ILLGEEGLVSVATEPSVTMTIVASSGIDALPAVIAAIRQKKTIALANKESLVAAGELVT 133
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
LA+++ V+ILP DSEH+A+FQC++G +K+ +LTASGG R
Sbjct: 134 TLARENGVQILPIDSEHNALFQCLEGRDSSTIKKLLLTASGGPLR 178
>gi|8134416|sp|Q9X5F2|DXR_ZYMMO 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|4768865|gb|AAD29659.1|AF124757_19
(AF124757) 1-deoxy-D-xylulose 5-phosphate reductoisomerase
[Zymomonas mobilis]
Length = 388
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 388
0 150 300
Plus Strand HSPs:
Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 70/165 (42%), Positives = 96/165 (58%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD++ N D +V+AL A NV LAD KR + + + SL +LKEAL
Sbjct: 20 TLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEAL--AGSSV 77
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E G ++E A A + I+GCAGLK T+AAI GK +ALANKE+L++ G ++
Sbjct: 78 EAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMI 136
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
++H +LP DSEH+AIFQC ++R I+TASGG FR
Sbjct: 137 DAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFR 181
>gi|6434139|emb|CAB60758.1| (AJ250714) 1-deoxy-D-xylulose 5-phosphate
reductoisomerase [Zymomonas mobilis]
Length = 388
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 388
0 150 300
Plus Strand HSPs:
Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 70/165 (42%), Positives = 96/165 (58%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD++ N D +V+AL A NV LAD KR + + + SL +LKEAL
Sbjct: 20 TLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEAL--AGSSV 77
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E G ++E A A + I+GCAGLK T+AAI GK +ALANKE+L++ G ++
Sbjct: 78 EAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMI 136
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
++H +LP DSEH+AIFQC ++R I+TASGG FR
Sbjct: 137 DAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFR 181
>gi|11279940|pir||G81712 1-deoxy-D-xylulose 5-phosphate reductoisomerase TC0343
[imported] - Chlamydia muridarum (strain Nigg)
>gi|7190384|gb|AAF39204.1| (AE002301) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Chlamydia muridarum]
Length = 379
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 379
0 150 300
Plus Strand HSPs:
Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 75/164 (45%), Positives = 106/164 (64%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
L ++ E PD + LAA G N L Q++ F P++VAVR+E+ EL++ +E
Sbjct: 18 LQVIREIPDAFVIETLAAYGRNRESLISQIREFSPRVVAVRDETTYKELRKLFPHIE--- 74
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLK--PTV-AAIEAGKYIALANKETLIAGGP 402
I+ GE+G+I VA A SV IV +G+ P V A+I+ K IALANKE+L+A G
Sbjct: 75 -ILSGEEGLIAVAT---AASVDMTIVASSGIDALPAVMASIQERKTIALANKESLVAAGE 130
Query: 403 FVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
V LA+K++V+ILP DSEH+A+FQC++G +K+ ILTASGG R
Sbjct: 131 LVTTLAKKNHVQILPIDSEHNALFQCLEGRDPSTIKKLILTASGGPLR 178
>gi|12722428|gb|AAK04072.1| (AE006235) Dxr [Pasteurella multocida]
Length = 405
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 307 (108.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 68/180 (37%), Positives = 102/180 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TL ++ NPD +V AL G NV L+ Q F+P A+ ++ L E L + +
Sbjct: 23 TLSVITHNPDKYQVFALVGGRNVELMFQQCLTFQPSFAALDDDVAAKMLAEKLKAHQSQT 82
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
++ G+Q I E+A HP+A V+ IVG AGL PT++A++AGK + LANKE L+ G +
Sbjct: 83 TVLAGQQAICELAAHPEADMVMAAIVGAAGLLPTLSAVKAGKRVLLANKEALVTCGQLFI 142
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ-------G---LPEGALKRXILTASGGAFRXWPVD 561
++ ++LP DSEH+AIFQ + G L E + + +LT SGG FR P++
Sbjct: 143 DAVRESQAQLLPVDSEHNAIFQSLPPEAQRQIGFCPLSELGISKIVLTGSGGPFRYTPLE 202
>gi|2506592|sp|P45568|DXR_ECOLI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449526|pir||E64741 yaeM protein -
Escherichia coli >gi|1552750|gb|AAB08602.1| (U70214) hypothetical
[Escherichia coli] >gi|1786369|gb|AAC73284.1| (AE000126) putative
ATP-binding component of a transport system [Escherichia coli K12]
>gi|3434984|dbj|BAA32426.1| (AB013300) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Escherichia coli]
Length = 398
Frame 1 hits (HSPs): _______________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 398
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 7..14
PRODOM PD186282: DXR(7) 1..82
PRODOM PD010039: DXR(7) 88..386
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 112..119
__________________
Plus Strand HSPs:
Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L +
Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G +
Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136
Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558
++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+
Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195
>gi|4902914|dbj|BAA77848.1| (D83536) Hypothetical protein in frr 3'region .
[Escherichia coli]
Length = 398
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 398
0 150 300
Plus Strand HSPs:
Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L +
Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G +
Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136
Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558
++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+
Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195
>gi|12512898|gb|AAG54475.1|AE005193_5 (AE005193) putative ATP-binding component
of a transport system [Escherichia coli O157:H7]
Length = 398
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 398
0 150 300
Plus Strand HSPs:
Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 72/179 (40%), Positives = 101/179 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V NP+ +VVAL AG NVT + +Q F P+ + +E+ LK L +
Sbjct: 17 TLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRT 76
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E++ G+Q ++A D V+ IVG AGL PT+AAI AGK I LANKE+L+ G +
Sbjct: 77 EVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFM 136
Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFRXWPV 558
++ ++LP DSEH+AIFQ IQ G L + + +LT SGG FR P+
Sbjct: 137 DAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPL 195
>gi|3913544|sp|O31753|DXR_BACSU 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449530|pir||B69881 conserved
hypothetical protein yluB - Bacillus subtilis
>gi|2634027|emb|CAB13528.1| (Z99112) similar to hypothetical
proteins [Bacillus subtilis]
Length = 388
Frame 1 hits (HSPs): _____________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 388
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 7..14
PRODOM PD186282: DXR(7) 1..67
PRODOM PD010039: DXR(7) 75..355
PRODOM PD136509: DXR_BACSU 357..387
__________________
Plus Strand HSPs:
Score = 297 (104.5 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 68/165 (41%), Positives = 102/165 (61%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD++ + D ++V+++ G N+ ++ F+P+ V+V + +LK+ E
Sbjct: 17 TLDVLRAHQDQFQLVSMSFGRNIDKAVPMIEVFQPKFVSVGDLDTYHKLKQMSFSFE--C 74
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
+I GE+G+IE A + VV ++G GL PT+ AIE K IALANKETL+ G V
Sbjct: 75 QIGLGEEGLIEAAVMEEVDIVVNALLGSVGLIPTLKAIEQKKTIALANKETLVTAGHIVK 134
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
A+K++V +LP DSEHSAIFQ +QG ++R I+TASGG+FR
Sbjct: 135 EHAKKYDVPLLPVDSEHSAIFQALQGEQAKNIERLIITASGGSFR 179
>gi|1175511|sp|P44055|DXR_HAEIN 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|1074518|pir||A64014 conserved
hypothetical protein HI0807 - Haemophilus influenzae (strain Rd
KW20) >gi|1573819|gb|AAC22466.1| (U32763) conserved hypothetical
protein [Haemophilus influenzae Rd]
Length = 397
Frame 1 hits (HSPs): _______________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 397
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 9..16
PRODOM PD186282: DXR(7) 4..84
PRODOM PD010039: DXR(7) 86..388
__________________
Plus Strand HSPs:
Score = 296 (104.2 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 67/180 (37%), Positives = 100/180 (55%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TL ++ NP AL G NV + +Q +F+P A+ + + L+E L
Sbjct: 19 TLSVIENNPQKYHAFALVGGKNVEAMFEQCIKFRPHFAALDDVNAAKILREKLIAHHIPT 78
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E++ G + I E+A HPDA ++ IVG AGL PT++A++AGK + LANKE+L+ G +
Sbjct: 79 EVLAGRRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGKRVLLANKESLVTCGQLFI 138
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ-------G---LPEGALKRXILTASGGAFRXWPVD 561
+ + K+LP DSEH+AIFQ + G L E + + ILT SGG FR P++
Sbjct: 139 DAVKNYGSKLLPVDSEHNAIFQSLPPEAQEKIGFCPLSELGVSKIILTGSGGPFRYTPLE 198
>gi|11131983|sp|P57329|DXR_BUCAI 1-DEOXY-D-XYLULOSE 5-PHOSPHATE
REDUCTOISOMERASE (DXP REDUCTOISOMERASE)
>gi|10038915|dbj|BAB12950.1| (AP001118) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Buchnera sp. APS]
Length = 398
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 398
0 150 300
Plus Strand HSPs:
Score = 287 (101.0 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 70/173 (40%), Positives = 100/173 (57%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234
L I+ +NPD KV+AL A N +++ Q + F P VA+R+E L++ L + +
Sbjct: 18 LSIIQKNPDLFKVIALVANKNFSIMLRQCELFSPDWVAMRDEKSAHILRKKLKHSKINTQ 77
Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414
++ GE+ I +A + V++ IVG AGL PT++AI AGK I LANKE+LI G F +
Sbjct: 78 VLTGEKDICALAALEETDHVISAIVGMAGLLPTLSAIHAGKTILLANKESLITSGYFFMK 137
Query: 415 LAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAF 543
KI+P DSEH+AIFQ IQ G L + ++K +LT SGG F
Sbjct: 138 ALSSSGAKIIPIDSEHNAIFQVLPLEIQKNLGKTTLEKNSIKHLVLTGSGGPF 190
>gi|11279938|pir||D82099 1-deoxy-D-xylulose 5-phosphate reductoisomerase VC2254
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656815|gb|AAF95398.1| (AE004297) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Vibrio cholerae]
Length = 402
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 402
0 150 300
Plus Strand HSPs:
Score = 285 (100.3 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 65/175 (37%), Positives = 100/175 (57%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TL ++A+NP +VAL AG NV + ++++P+ + S +EL+ L +
Sbjct: 17 TLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASAASELQGLLKNQAMAT 76
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
E++ GE+ + +VA D +V+ IVG AGL PT+AA++AGK + LANKE L+ G +
Sbjct: 77 EVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVLLANKEALVMSGQLFI 136
Query: 412 PLAQKHNVKILPADSEHSAIFQC----IQ---G---LPEGALKRXILTASGGAFR 546
+ +++P DSEH+AIFQC IQ G L + + +LT SGG FR
Sbjct: 137 DAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHILLTGSGGPFR 191
>gi|11347257|pir||E83188 1-deoxy-d-xylulose 5-phosphate reductoisomerase PA3650
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9664863|gb|AAF97241.1|AF282879_1 (AF282879) 1-deoxy-D-xylulose
5-phosphate reductoisomerase; Dxp reductoisomerase; Dxr
[Pseudomonas aeruginosa] >gi|9949811|gb|AAG07038.1|AE004785_2
(AE004785) 1-deoxy-d-xylulose 5-phosphate reductoisomerase
[Pseudomonas aeruginosa]
Length = 396
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 65/175 (37%), Positives = 95/175 (54%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V +PD + AL S + L R +P V ++ L+ +L +
Sbjct: 20 TLDVVQRHPDRYEAFALTGFSRLAELEALCLRHRPVYAVVPEQAAAIALQGSLAAAGIRT 79
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
++ GEQ + EVA P+ V+ IVG AGL T+AA+EAGK + LANKE L+ G +
Sbjct: 80 RVLFGEQALCEVASAPEVDMVMAAIVGAAGLPSTLAAVEAGKRVLLANKEALVMSGALFM 139
Query: 412 PLAQKHNVKILPADSEHSAIFQCI-----QGLPEGALKRXILTASGGAFRXWPVD 561
++ +LP DSEH+AIFQ + GL ++R +LTASGG FR P++
Sbjct: 140 QAVKRSGAVLLPIDSEHNAIFQSLPRNYADGLERVGVRRILLTASGGPFRETPLE 194
>gi|7470980|pir||F75388 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
Deinococcus radiodurans (strain R1)
>gi|6459269|gb|AAF11074.1|AE001994_10 (AE001994)
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Deinococcus
radiodurans]
Length = 396
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 273 (96.1 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 67/170 (39%), Positives = 96/170 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+ + G V LAAG N+ LLA+QV+ F+P LV+V + S++AE +E L V
Sbjct: 19 TLDVARQR--GYTVGTLAAGRNLDLLAEQVREFRPALVSV-DGSILAEARERLSGVRVIA 75
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
+ P E + + D V V + G GL PT AA+EAG+ +ALA KE ++ +
Sbjct: 76 D--PSEAAVAQA----DVV--VNAMSGLIGLPPTRAALEAGQAVALATKEAMVTSAHLMW 127
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
A +++P DSEH+ ++QC+ G G + ILTASGG FR P D
Sbjct: 128 EAAAAGGGRVVPVDSEHTGVYQCLTGEDMGDVAELILTASGGPFRDGPAD 177
>gi|11279943|pir||A81229 1-deoxy-D-xylulose 5-phosphate reductoisomerase
NMB0184 [imported] - Neisseria meningitidis (group B strain MD58)
>gi|7225403|gb|AAF40641.1| (AE002375) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Neisseria meningitidis MC58]
Length = 394
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 394
0 150 300
Plus Strand HSPs:
Score = 262 (92.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/169 (37%), Positives = 91/169 (53%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V+ +P+ +V ALA V LA Q + F P+ V + A L+ L
Sbjct: 19 TLDVVSRHPEKFRVFALAGHKQVEKLAAQCQTFHPEYAVVADAEHAARLEALLKRDGTAT 78
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
+++ G Q +++VA + V+ IVG GL +AA + GK I LANKETL+ G +
Sbjct: 79 QVLHGAQALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFM 138
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ----G-LPEGALKRXILTASGGAF 543
A+ + +LP DSEH+A+FQ + G L E + ILTASGG F
Sbjct: 139 ETARANGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPF 187
>gi|11279941|pir||B82000 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC
1.1.1.-) NMA0083 [imported] - Neisseria meningitidis (group A
strain Z2491) >gi|7378856|emb|CAB83399.1| (AL162752)
1-deoxy-D-xylulose 5-phosphate reductoisomerase [Neisseria
meningitidis Z2491]
Length = 394
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 394
0 150 300
Plus Strand HSPs:
Score = 262 (92.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/169 (37%), Positives = 91/169 (53%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD+V+ +P+ +V ALA V LA Q + F P+ V + A L+ L
Sbjct: 19 TLDVVSRHPEKFRVFALAGHKQVEKLAAQCQTFHPEYAVVADAEHAARLEALLKRDGTAT 78
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
+++ G Q +++VA + V+ IVG GL +AA + GK I LANKETL+ G +
Sbjct: 79 QVLHGAQALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFM 138
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQ----G-LPEGALKRXILTASGGAF 543
A+ + +LP DSEH+A+FQ + G L E + ILTASGG F
Sbjct: 139 ETARANGAAVLPVDSEHNAVFQVLPRDYTGRLNEHGIASIILTASGGPF 187
>gi|11279937|pir||H82728 1-deoxy-D-xylulose 5-phosphate reductoisomerase XF1048
[imported] - Xylella fastidiosa (strain 9a5c)
>gi|9105992|gb|AAF83858.1|AE003942_2 (AE003942) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Xylella fastidiosa]
Length = 396
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 260 (91.5 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 60/164 (36%), Positives = 87/164 (53%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234
LD++A +P V LAAG V L ++P + + +L L++ L+ +
Sbjct: 22 LDVLARHPRQFHVSLLAAGQRVDALLALCHTYRPDHAVIGDATLYTTLRDGLNAAGLATK 81
Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414
GE + E+ +VV IVG AGL T+AA AGK + LANKE+L+ G ++
Sbjct: 82 AYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLMR 141
Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
A +I+P DSEH+AIFQC++ + R LTASGG FR
Sbjct: 142 EASISGAEIIPIDSEHNAIFQCLRSRTTDGVHRITLTASGGPFR 185
>gi|12230984|sp|Q10798|DXR_MYCTU 1-DEOXY-D-XYLULOSE 5-PHOSPHATE
REDUCTOISOMERASE (DXP REDUCTOISOMERASE)
Length = 413
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 413
0 150 300
Plus Strand HSPs:
Score = 257 (90.5 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 66/166 (39%), Positives = 95/166 (57%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234
L ++A+NPD +VV LAAG L D + R + Q V N ++ E A V + P
Sbjct: 29 LQVIADNPDRFEVVGLAAGG-AHL--DTLLRQRAQ-TGVTNIAVADE--HAAQRVGDIP- 81
Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414
G + +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL
Sbjct: 82 -YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLR 140
Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXW 552
A+ +I+P DSEHSA+ QC++G + + +LTASGG FR W
Sbjct: 141 AARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGW 184
>gi|7449536|pir||A70923 hypothetical protein Rv2870c - Mycobacterium
tuberculosis (strain H37RV) >gi|3250701|emb|CAA98375.1| (Z74024)
hypothetical protein Rv2870c [Mycobacterium tuberculosis]
Length = 436
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 436
0 150 300
Plus Strand HSPs:
Score = 257 (90.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 66/166 (39%), Positives = 95/166 (57%), Frame = +1
Query: 55 LDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPE 234
L ++A+NPD +VV LAAG L D + R + Q V N ++ E A V + P
Sbjct: 52 LQVIADNPDRFEVVGLAAGG-AHL--DTLLRQRAQ-TGVTNIAVADE--HAAQRVGDIP- 104
Query: 235 IIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLP 414
G + +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL
Sbjct: 105 -YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLR 163
Query: 415 LAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXW 552
A+ +I+P DSEHSA+ QC++G + + +LTASGG FR W
Sbjct: 164 AARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGW 207
>gi|8134419|sp|Q9Z8J8|DXR_CHLPN 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449534|pir||B72091 ct071 hypothetical
protein - Chlamydophila pneumoniae (strain CWL029)
>gi|4376619|gb|AAD18489.1| (AE001618) CT071 hypothetical protein
[Chlamydophila pneumoniae CWL029]
Length = 379
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 379
0 150 300
Plus Strand HSPs:
Score = 251 (88.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 55/162 (33%), Positives = 93/162 (57%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228
TL+IV P K++++A+ G+N+ L Q++ F P AV NE + E + ++
Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQQLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74
Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408
G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V
Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132
Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537
A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG
Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175
>gi|11279939|pir||C81578 1-deoxy-D-xylulose 5-phosphate reductoisomerase CP0415
[imported] - Chlamydophila pneumoniae (strain AR39)
>gi|7189340|gb|AAF38259.1| (AE002203) 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Chlamydophila pneumoniae AR39]
Length = 379
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 379
0 150 300
Plus Strand HSPs:
Score = 251 (88.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 55/162 (33%), Positives = 93/162 (57%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228
TL+IV P K++++A+ G+N+ L Q++ F P AV NE + E + ++
Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQQLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74
Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408
G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V
Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132
Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537
A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG
Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175
>gi|8978717|dbj|BAA98553.1| (AP002546) CT071 hypothetical protein
[Chlamydophila pneumoniae J138]
Length = 379
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 379
0 150 300
Plus Strand HSPs:
Score = 246 (86.6 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 54/162 (33%), Positives = 92/162 (56%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAA-GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEK 228
TL+IV P K++++A+ G+N+ L ++ F P AV NE + E + ++
Sbjct: 17 TLEIVRRYPSEFKIISMASYGNNLRLFFQHLEEFAPLAAAVYNEEVYNEACQRFPHMQ-- 74
Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFV 408
G++G+ ++ +VV G L + +++ GK +ALANKE L+ G V
Sbjct: 75 --FFLGQEGLTQLCIMDTVTTVVAASSGIEALPAILESMKKGKALALANKEILVCAGELV 132
Query: 409 LPLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGG 537
A+++ +K+LP DSEH+A++QC++G +K+ ILTASGG
Sbjct: 133 SKTAKENGIKVLPIDSEHNALYQCLEGRTIEGIKKLILTASGG 175
>gi|4139260|gb|AAD03739.1| (AF111813) 1-deoxy-D-xylulose 5-phosphate
reductoisomerase [Plasmodium falciparum]
Length = 488
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | 488
0 150 300 450
Plus Strand HSPs:
Score = 237 (83.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 52/133 (39%), Positives = 81/133 (60%), Frame = +1
Query: 91 VVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEE-KPEIIPGEQGIIEV 267
V AL +V L +Q + F P+ + + ++S+ ELKE + ++++ KP I+ G++G+ E+
Sbjct: 109 VKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEI 168
Query: 268 ARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKH-NVKIL 444
+V GI GL T+ AI K +ALANKE++++ G F+ L H N KI+
Sbjct: 169 CSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKII 228
Query: 445 PADSEHSAIFQCI 483
P DSEHSAIFQC+
Sbjct: 229 PVDSEHSAIFQCL 241
>gi|11279942|pir||G81278 probable 1-deoxy-D-xylulose 5-phosphate
reductoisomerase (EC 1.1.1.-) Cj1346c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968780|emb|CAB73773.1| (AL139078)
putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase
[Campylobacter jejuni]
Length = 356
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 223 (78.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 56/156 (35%), Positives = 87/156 (55%), Frame = +1
Query: 91 VVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGIIEVA 270
+ ALA G N+ LL +Q+ RFKP+ V++++ +K HD + G++G+ ++
Sbjct: 25 ISALACGDNIALLNEQIARFKPKFVSIKDSKNKHLVK---HD-----RVFIGQEGLEQIL 76
Query: 271 RHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPA 450
++ IVG AGLK T+ A E GK IALANKE+L+ G F+ K LP
Sbjct: 77 TECQDKLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL------KGAKFLPV 130
Query: 451 DSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPV 558
DSEH+A+ ++G + + +TASGGAF + +
Sbjct: 131 DSEHAALKFLLEGKKN--IAKLYITASGGAFYRYKI 164
>gi|8134420|sp|Q9ZML6|DXR_HELPJ 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449528|pir||G71961 hypothetical protein
jhp0202 - Helicobacter pylori (strain J99)
>gi|4154714|gb|AAD05777.1| (AE001458) putative [Helicobacter pylori
J99]
Length = 368
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 368
0 150 300
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 58/160 (36%), Positives = 90/160 (56%), Frame = +1
Query: 82 GGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGII 261
G K+ AL+ G N+ L+ +Q+K FKP+ VA+ + + + L E L E+ G GI
Sbjct: 22 GVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNL-EPLG-----AEVFVGLDGID 75
Query: 262 EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKI 441
+ + V+ IVG AGLK + +++ K +ALANKE+L++ G +L ++Q I
Sbjct: 76 AMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-HLLDISQ-----I 129
Query: 442 LPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
P DSEH ++ +Q K I++ASGGAFR P+D
Sbjct: 130 TPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLD 168
>gi|8134414|sp|Q9WZZ1|DXR_THEMA 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449533|pir||B72321 conserved
hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981424|gb|AAD35970.1|AE001754_7 (AE001754) conserved
hypothetical protein [Thermotoga maritima]
Length = 376
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 376
0 150 300
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 55/169 (32%), Positives = 97/169 (57%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TLD++ + G +++ ++ SN+ L VK F + VA+ + E +++ +V +
Sbjct: 19 TLDVL-KKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGD---VEFEDSSINVWKGS 74
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
I + ++E + PD V + G +GL+ +A++E K + LANKE+L+ GG V
Sbjct: 75 HSI---EEMLEALK-PDITMVA--VSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVK 128
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPV 558
++ +++P DSEHSAIFQ ++ PE +++ +LTASGGA R W +
Sbjct: 129 KKLKEKGTELIPVDSEHSAIFQVME--PE--VEKVVLTASGGALRDWKI 173
>gi|2495695|sp|P56139|DXR_HELPY 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449529|pir||H64546 conserved
hypothetical protein HP0216 - Helicobacter pylori (strain 26695)
>gi|2313306|gb|AAD07284.1| (AE000541) conserved hypothetical
protein [Helicobacter pylori 26695]
Length = 368
Frame 1 hits (HSPs): _____________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 368
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 4..11
PRODOM PD186282: DXR(7) 2..62
PRODOM PD010039: DXR(7) 64..367
__________________
Plus Strand HSPs:
Score = 204 (71.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 56/160 (35%), Positives = 92/160 (57%), Frame = +1
Query: 82 GGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGII 261
G ++ AL+ G N+ L+ +Q++ FKP+ VA+ + S + +L E L E+ G +GI
Sbjct: 22 GIEIEALSCGKNIALINEQIQVFKPKKVAILDPSDLNDL-EPLG-----AEVFVGLEGID 75
Query: 262 EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKI 441
+ + V+ IVG AGLK + +++ K +ALANKE+L++ G +L ++Q I
Sbjct: 76 AMIEECTSNLVLNAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-HLLDISQ-----I 129
Query: 442 LPADSEHSAIFQCIQGLPEGALKRXILTASGGAFRXWPVD 561
P DSEH ++ +Q K I++ASGGAFR P++
Sbjct: 130 TPIDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLE 168
>gi|3913547|sp|O66722|DXR_AQUAE 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE) >gi|7449531|pir||F70336 conserved
hypothetical protein aq_404 - Aquifex aeolicus
>gi|2983081|gb|AAC06688.1| (AE000688) hypothetical protein [Aquifex
aeolicus]
Length = 380
Frame 1 hits (HSPs): ______________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 380
0 150 300
__________________
Annotated Domains:
Entrez np-binding site: NADPH (POTENTIAL). 6..13
PRODOM PD186282: DXR(7) 1..66
PRODOM PD010039: DXR(7) 70..370
__________________
Plus Strand HSPs:
Score = 196 (69.0 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 48/165 (29%), Positives = 84/165 (50%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TL + D ++V + A L Q K++KP+ V E KE L + E
Sbjct: 16 TLQVYENFRDEIELVGILANRASEKLLQQAKKYKPKYVVSYQEPA----KEWLESLPEGV 71
Query: 232 EIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVL 411
+ + G++G+ + + + + I G G+KP I+AGK + +NKE+++ G +
Sbjct: 72 KYLKGDEGLKAIIEESERL--MNAISGIYGIKPAYEVIKAGKTLLASNKESILCLGEII- 128
Query: 412 PLAQKHNVKILPADSEHSAIFQCIQGLPEGALKRXILTASGGAFR 546
+K+ +++P DSEH+A+FQ + + +K LTASGG F+
Sbjct: 129 ---RKNRERVIPVDSEHNALFQLLSSVKREEVKHVYLTASGGPFK 170
>gi|11967840|emb|CAC19426.1| (AJ292312) DXP reductoisomerase [Klebsiella
pneumoniae]
Length = 115
Frame 1 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | 115
0 50 100
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 41/98 (41%), Positives = 57/98 (58%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAE-LKEALHDVEEK 228
TLD+V NP V AL AG NV + +Q F P+ AV +++ AE L+ LH+ +
Sbjct: 17 TLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRY-AVMDDAQSAERLRTRLHEHGSR 75
Query: 229 PEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAI 345
E++ G+Q EVA + V+ IVG AGL PT+AAI
Sbjct: 76 TEVLSGQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAI 114
>gi|8134412|sp|O83610|DXR_TREPA 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
(DXP REDUCTOISOMERASE)
Length = 376
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 376
0 150 300
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 36/91 (39%), Positives = 54/91 (59%), Frame = +1
Query: 280 DAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPADSE 459
+A VV GI G AGL ++ ++ +ALANKE+++ + A++ I+P DSE
Sbjct: 79 EAEVVVNGIAGAAGLFASLEVLKTRCTLALANKESVVLAASLLHAAARESGATIVPVDSE 138
Query: 460 HSAIFQCIQGLPEGALKRXILTASGGAFRXW 552
H+AIFQ I A+ + +LTASGG FR +
Sbjct: 139 HAAIFQLIAAHGAHAVAQVVLTASGGPFRTF 169
>gi|7449532|pir||C71304 conserved hypothetical protein TP0601 - syphilis
spirochete >gi|3322895|gb|AAC65574.1| (AE001235) conserved
hypothetical protein [Treponema pallidum]
Length = 383
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 383
0 150 300
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/91 (39%), Positives = 54/91 (59%), Frame = +1
Query: 280 DAVSVVTGIVGCAGLKPTVAAIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPADSE 459
+A VV GI G AGL ++ ++ +ALANKE+++ + A++ I+P DSE
Sbjct: 86 EAEVVVNGIAGAAGLFASLEVLKTRCTLALANKESVVLAASLLHAAARESGATIVPVDSE 145
Query: 460 HSAIFQCIQGLPEGALKRXILTASGGAFRXW 552
H+AIFQ I A+ + +LTASGG FR +
Sbjct: 146 HAAIFQLIAAHGAHAVAQVVLTASGGPFRTF 176
>gi|3341600|emb|CAA13144.1| (AJ231102) z44f [Vibrio cholerae]
Length = 94
Frame 1 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.012, P = 0.011
Identities = 19/67 (28%), Positives = 37/67 (55%), Frame = +1
Query: 52 TLDIVAENPDGGKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKP 231
TL ++A+NP +VAL AG NV + ++++P+ + S +EL+ L +
Sbjct: 17 TLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASAASELQGLLKNQAMAT 76
Query: 232 EIIPGEQ 252
E++ G++
Sbjct: 77 ELLYGKK 83
>gi|106253|pir||S18946 ultra high-sulfur keratin 1 - human
>gi|32472|emb|CAA45283.1| (X63755) high-sulpher keratin [Homo
sapiens]
Length = 169
Frame 3 hits (HSPs): _____________ ____________________________
Annotated Domains: ________________ ______________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
__________________
Annotated Domains:
PROSITE VWFC: VWFC domain signature. 106..150
PROSITE VWFC: VWFC domain signature. 36..86
PROSITE VWFC: VWFC domain signature. 36..88
__________________
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.013, Sum P(2) = 0.013
Identities = 17/39 (43%), Positives = 17/39 (43%), Frame = +3
Query: 63 CGRESRWGESCGTC--SWFKCYSSCRP-GKKI*ASTCCC 170
CG G SCG C S C S CR G A CCC
Sbjct: 4 CGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVCCC 42
Score = 68 (23.9 bits), Expect = 0.013, Sum P(2) = 0.013
Identities = 20/65 (30%), Positives = 27/65 (41%), Frame = +3
Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431
G+ GC S CSQCS C + S C + + Q C + CSSS +
Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ--CSCCKPCCSSSGRGSS 124
Query: 432 CKNTS 446
C +S
Sbjct: 125 CCQSS 129
Score = 67 (23.6 bits), Expect = 0.017, Sum P(2) = 0.017
Identities = 20/59 (33%), Positives = 25/59 (42%), Frame = +3
Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRS--REIHSFSQQRDIDCWRSFCSSSCSEA*C 434
C P CSQCS C + +SCC S + S S C S C CS++ C
Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRC 159
Score = 65 (22.9 bits), Expect = 0.027, Sum P(2) = 0.026
Identities = 20/59 (33%), Positives = 24/59 (40%), Frame = +3
Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA*CKN 440
C P CSQCS C + +SCC S S C S C SSC + C
Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSS---GCGSSCCQSSCCKPCCSQ 156
Query: 441 T 443
+
Sbjct: 157 S 157
>gi|11250976|pir||E81106 probable homoserine dehydrogenase (EC 1.1.1.3) NMA1395
[imported] - Neisseria meningitidis (group B strain MD58, group A
strain Z2491) >gi|7226467|gb|AAF41609.1| (AE002471) homoserine
dehydrogenase [Neisseria meningitidis MC58]
>gi|7380055|emb|CAB84636.1| (AL162755) putative homoserine
dehydrogenase [Neisseria meningitidis Z2491]
Length = 435
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 435
0 150 300
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.093, P = 0.089
Identities = 42/142 (29%), Positives = 64/142 (45%), Frame = +1
Query: 109 GSNVTLLADQVKRFKPQLVAVRNESLIAELKEALHDVEEKPEIIPGEQGI---IEVARHP 279
G +L D + +L S + +L E E+ + P + E+
Sbjct: 16 GGTAAVLRDNAEEISRRLGREIRISAVCDLSE-----EKARQTCPSAAFVKDPFELVARE 70
Query: 280 DAVSVVTGIVGCAGL-KPTVA-AIEAGKYIALANKETLIAGGPFVLPLAQKHNVKILPAD 453
D V VV + G G+ K V AIE GK+I ANK+ L G + PLA+K NV I+ +
Sbjct: 71 D-VDVVVELFGGTGIAKDAVLKAIENGKHIVTANKKLLAEYGNEIFPLAEKQNV-IVQFE 128
Query: 454 SEHSAIFQCIQGLPEGALKRXILTASG 534
+ + I+ L EG I + +G
Sbjct: 129 AAVAGGIPIIKALREGLAANRIKSIAG 155
>gi|7188828|gb|AAF37892.1| (AF238478) histone H3 [Gibberella circinata]
Length = 105
Frame -1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | | 105
0 20 40 60 80 100
Minus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.12, P = 0.11
Identities = 27/86 (31%), Positives = 39/86 (45%), Frame = -1
Query: 254 PCSPGMISGFSSTSCKASLSSAIRD--SFLTATS*GLNLFTWSARRVTFEPAASATTFPP 81
P P + ++TS SLS D S L+++S WSAR SA++ PP
Sbjct: 18 PHPPEVSRSLTATSLVPSLSVRFDDTRSRLSSSSESSPSSAWSARLPRTSSPISASSLPP 77
Query: 80 SGFSATISSVYKSIQARAEFLQPGDP 3
S S ++SS+ S +R P P
Sbjct: 78 SVLSRSLSSLTSSPSSRIPTSVPSTP 103
>gi|12736003 ref|XP_011969.1| UHS KerB [Homo sapiens]
Length = 187
Frame 3 hits (HSPs): ____________ __________________
__________________________________________________
Database sequence: | | | | | 187
0 50 100 150
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.12, Sum P(2) = 0.12
Identities = 20/64 (31%), Positives = 27/64 (42%), Frame = +3
Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431
G+ GC S CSQCS C + S C +S Q C CSS C +
Sbjct: 75 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSC-CKPCSCSSGCGSSC 133
Query: 432 CKNT 443
C+++
Sbjct: 134 CQSS 137
Score = 53 (18.7 bits), Expect = 0.12, Sum P(2) = 0.12
Identities = 16/43 (37%), Positives = 16/43 (37%), Frame = +3
Query: 63 CGRESRWGESCGTCS--WFKCYSSCRPGKKI*ASTCCC*K*VPNC 191
CG G CG C C SSC CCC VP C
Sbjct: 4 CGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCC---VPAC 45
>gi|5031835 ref|NP_005544.1| keratin, cuticle, ultrahigh sulphur 1; Keratin,
hair cuticle, ultrahigh-sulfur, 1 [Homo sapiens] >gi|12736001
ref|XP_011968.1| keratin, cuticle, ultrahigh sulphur 1 [Homo
sapiens] >gi|125681|sp|P26371|KRUA_HUMAN KERATIN, ULTRA HIGH-SULFUR
MATRIX PROTEIN A (UHS KERATIN A) (UHS KERA) >gi|108020|pir||B36686
ultra-high-sulfur keratin - human >gi|34079|emb|CAA39005.1|
(X55293) ultra high-sulphur keratin protein [Homo sapiens]
>gi|3228239|emb|CAA07189.1| (AJ006693) ultra high sulfer keratin
[Homo sapiens] >gi|227473|prf||1704255A Cys rich protein [Homo
sapiens]
Length = 169
Frame 3 hits (HSPs): _____________ ____________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 20/65 (30%), Positives = 27/65 (41%), Frame = +3
Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431
G+ GC S CSQCS C + S C + + Q C + CSSS +
Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ--CSCCKPCCSSSGRGSS 124
Query: 432 CKNTS 446
C +S
Sbjct: 125 CCQSS 129
Score = 67 (23.6 bits), Expect = 0.27, Sum P(2) = 0.24
Identities = 20/59 (33%), Positives = 25/59 (42%), Frame = +3
Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRS--REIHSFSQQRDIDCWRSFCSSSCSEA*C 434
C P CSQCS C + +SCC S + S S C S C CS++ C
Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRC 159
Score = 65 (22.9 bits), Expect = 0.47, Sum P(2) = 0.37
Identities = 20/59 (33%), Positives = 24/59 (40%), Frame = +3
Query: 267 CSSPRCSQCSHRNSRLCRTEA--NSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA*CKN 440
C P CSQCS C + +SCC S S C S C SSC + C
Sbjct: 101 CCKPYCSQCSCCKP-CCSSSGRGSSCCQSSCCKPCCSSS---GCGSSCCQSSCCKPCCSQ 156
Query: 441 T 443
+
Sbjct: 157 S 157
Score = 60 (21.1 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 16/39 (41%), Positives = 16/39 (41%), Frame = +3
Query: 63 CGRESRWGESCGTC--SWFKCYSSCRP-GKKI*ASTCCC 170
CG G SCG C S C S CR G A CC
Sbjct: 4 CGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCC 42
>gi|3688513|emb|CAA06655.1| (AJ005663) touB [Pseudomonas stutzeri]
Length = 86
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 86
0 20 40 60 80
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.32, P = 0.27
Identities = 23/71 (32%), Positives = 37/71 (52%), Frame = +1
Query: 124 LLADQVKRFKPQLVAVRNESLIAELKE--ALHDVEEKPEIIPGEQGIIEVARHPDAVSVV 297
++++ + F QLV V E + ++ E A H + + + P + I+ V RH D
Sbjct: 6 IMSNFERDFVIQLVPVDTEDTMDQVAEKCAYHSINRR--VHPQPEKILRVRRHEDGTLFP 63
Query: 298 TG-IVGCAGLKPT 333
G IV AGL+PT
Sbjct: 64 RGMIVSDAGLRPT 76
>gi|10567824 ref|NP_066384.1| UHS KerB [Homo sapiens]
>gi|10720064|sp|O75690|KRUB_HUMAN KERATIN, ULTRA HIGH-SULFUR MATRIX
PROTEIN B (UHS KERATIN B) (UHS KERB) >gi|3228237|emb|CAA07188.1|
(AJ006692) ultra high sulfer keratin [Homo sapiens]
Length = 194
Frame 3 hits (HSPs): ______________ ____________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.36, Sum P(2) = 0.30
Identities = 20/64 (31%), Positives = 27/64 (42%), Frame = +3
Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEANSCCDRSREIHSFSQQRDIDCWRSFCSSSCSEA* 431
G+ GC S CSQCS C + S C +S Q C CSS C +
Sbjct: 82 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSC-CKPCSCSSGCGSSC 140
Query: 432 CKNT 443
C+++
Sbjct: 141 CQSS 144
Score = 73 (25.7 bits), Expect = 1.1, Sum P(2) = 0.68
Identities = 24/73 (32%), Positives = 29/73 (39%), Frame = +3
Query: 252 GNH*GCSSPRCSQCSHRNSRLCRTEA-NSCCDRSREIHSFSQQR-------DIDCWRSFC 407
G+ GC S CSQCS C + +SCC S SQ C S C
Sbjct: 82 GSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCC 141
Query: 408 SSSCSEA*CKNTS 446
SSC + C +S
Sbjct: 142 QSSCCKPCCSQSS 154
Score = 49 (17.2 bits), Expect = 0.36, Sum P(2) = 0.30
Identities = 13/36 (36%), Positives = 15/36 (41%), Frame = +3
Query: 84 GESCGTCSWFKCYS--SCRPGKKI*ASTCCC*K*VPNC 191
G CG C +C C+P CCC VP C
Sbjct: 25 GSGCGGCGSSRCVPICCCKP-------VCCC---VPAC 52
Score = 48 (16.9 bits), Expect = 0.46, Sum P(2) = 0.37
Identities = 13/39 (33%), Positives = 13/39 (33%), Frame = +3
Query: 63 CGRESRWGESCGTCS--WFKCYSSCRP-GKKI*ASTCCC 170
CG G CG C C S C G CCC
Sbjct: 4 CGCSGGCGSGCGGCGSGCGGCGSGCGGCGSSRCVPICCC 42
WARNING: HSPs involving 11 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.354 0.152 0.634
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.366 0.167 0.574
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.329 0.143 0.456
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.336 0.142 0.459
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.150 0.495
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.145 0.530
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 237 229 10. 78 3 12 22 0.11 35
32 0.12 38
+2 0 237 229 10. 78 3 12 22 0.11 35
32 0.12 38
+1 0 237 229 10. 78 3 12 22 0.11 35
32 0.12 38
-1 0 237 230 10. 78 3 12 22 0.11 35
32 0.097 39
-2 0 237 229 10. 78 3 12 22 0.11 35
32 0.12 38
-3 0 237 229 10. 78 3 12 22 0.11 35
32 0.12 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 61
No. of states in DFA: 599 (59 KB)
Total size of DFA: 250 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 228.62u 1.16s 229.78t Elapsed: 00:00:39
Total cpu time: 228.68u 1.20s 229.88t Elapsed: 00:00:39
Start: Mon Oct 1 23:35:27 2001 End: Mon Oct 1 23:36:06 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000