Os06g0505100 (Os06g0505100)

NCBI

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Finding cDNAs

UGID:2322411 UniGene Os.88420 Oryza sativa (rice) Os06g0505100

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Os06g0505100 (Os06g0505100)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001057715.1	Os06g0505100	O. sativa	100.0	2365
NP_176885.3	binding	A. thaliana	62.6	302

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	panicle; leaf; whole plant; unspecified tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_001064250.1

Oryza sativa (japonica cultivar-group) Os06g0505100 (Os06g0505100) mRNA, complete cds

EST sequences (12)

AU056360.1	Clone S20510_1A	leaf		P
AU056361.1	Clone S20510_4Z	leaf		A
CA761947.1	Clone BR060014B20D07.ab1	panicle		A
CA762097.1	Clone BR060006A10C03.ab1	panicle		A
CB097156.1	Clone C0004856	panicle	5' read	P
CB663996.1	Clone OSJNEd09H16	leaf	3' read	P
CR286252.1	Clone y747c03p5	unspecified tissue		P
CF988760.1		whole plant	5' read	P
CK043817.1		panicle	5' read	P
CK071557.1		panicle	5' read	P
CX103721.1	Clone BI027I23	whole plant	5' read
EG715297.1	Clone 6CPR-E1C08S	panicle		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria