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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 1 > SNPs Localized to Interval 3 |
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D1S228 - D1S199 24.9 cM - 42.5 cM / 51.31 cR - 70.60 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.380857 | RCC2 | Regulator of chromosome condensation 2 | CGAP-C-15603 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.709237 | MFN2 | Mitofusin 2 | CGAP-C-259762 |
SNPs | Gene Info |
| Hs.468675 | PDPN | Podoplanin | CGAP-C-58279 |
SNPs | Gene Info |
| Hs.465305 | TMEM51 | Transmembrane protein 51 | CGAP-C-50362 |
SNPs | Gene Info |
| Hs.368823 | RP1-21O18 | Kazrin | CGAP-C-55520 CGAP-C-235681 CGAP-C-235682 CGAP-C-248311 CGAP-C-248312 |
SNPs | Gene Info |
| Hs.465374 | EFHD2 | EF-hand domain family, member D2 | CGAP-C-604472 |
SNPs | Gene Info |
| Hs.591532 | ARHGEF19 | Rho guanine nucleotide exchange factor (GEF) 19 | CGAP-C-616088 |
SNPs | Gene Info |
| Hs.646775 | PLEKHM2 | Pleckstrin homology domain containing, family M (with RUN domain) member 2 | CGAP-C-50497 |
SNPs | Gene Info |
| Hs.530101 | FBLIM1 | Filamin binding LIM protein 1 | CGAP-C-50319 CGAP-C-51412 |
SNPs | Gene Info |
| Hs.502612 | HSPB7 | Heat shock 27kDa protein family, member 7 (cardiovascular) | CGAP-C-273467 CGAP-C-273468 |
SNPs | Gene Info |
| Hs.252967 | C1orf144 | Chromosome 1 open reading frame 144 | CGAP-C-262118 CGAP-C-620056 |
SNPs | Gene Info |
| Hs.467587 | NBPF1 | Neuroblastoma breakpoint family, member 1 | CGAP-C-52314 CGAP-C-60998 CGAP-C-270860 |
SNPs | Gene Info |
| Hs.631865 | CROCCL1 | Ciliary rootlet coiled-coil, rootletin-like 1 | CGAP-C-47729 CGAP-C-50607 CGAP-C-61190 |
SNPs | Gene Info |
| Hs.655432 | MSTP9 | Macrophage stimulating, pseudogene 9 | CGAP-C-50599 CGAP-C-56940 |
SNPs | Gene Info |
| Hs.466804 | PLA2G2A | Phospholipase A2, group IIA (platelets, synovial fluid) | CGAP-C-56580 CGAP-C-57911 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.709237 | MFN2 | Mitofusin 2 | CGAP-C-2471488 CGAP-C-2471491 |
SNPs | Gene Info |
| Hs.468675 | PDPN | Podoplanin | CGAP-C-2462924 CGAP-C-2462925 |
SNPs | Gene Info |
| Hs.481571 | UQCRH | Ubiquinol-cytochrome c reductase hinge protein | CGAP-C-2481629 CGAP-C-2481634 |
SNPs | Gene Info |
| Hs.465305 | TMEM51 | Transmembrane protein 51 | CGAP-C-2430382 CGAP-C-2430383 CGAP-C-2430384 |
SNPs | Gene Info |
| Hs.631866 | ELA2A | Elastase 2A | CGAP-C-2390768 CGAP-C-2390769 CGAP-C-2390770 |
SNPs | Gene Info |
| Hs.631871 | RP11-265F14 | Elastase 2B | CGAP-C-2431753 |
SNPs | Gene Info |
| Hs.329502 | CASP9 | Caspase 9, apoptosis-related cysteine peptidase | CGAP-C-2388135 CGAP-C-2388136 CGAP-C-2388137 |
SNPs | Gene Info |
| Hs.465374 | EFHD2 | EF-hand domain family, member D2 | CGAP-C-2435078 CGAP-C-2435079 CGAP-C-2435080 CGAP-C-2435081 CGAP-C-2435083 CGAP-C-2435084 CGAP-C-2435087 |
SNPs | Gene Info |
| Hs.567583 | AGMAT | Agmatine ureohydrolase (agmatinase) | CGAP-C-2448035 CGAP-C-2448037 |
SNPs | Gene Info |
| Hs.646775 | PLEKHM2 | Pleckstrin homology domain containing, family M (with RUN domain) member 2 | CGAP-C-2396985 CGAP-C-2396986 CGAP-C-2396990 |
SNPs | Gene Info |
| Hs.433764 | ZBTB17 | Zinc finger and BTB domain containing 17 | CGAP-C-2418701 CGAP-C-2443120 CGAP-C-2443121 |
SNPs | Gene Info |
| Hs.522384 | FBXO42 | F-box protein 42 | CGAP-C-2399437 |
SNPs | Gene Info |
| Hs.655410 | DNAJC16 | DnaJ (Hsp40) homolog, subfamily C, member 16 | CGAP-C-2442639 |
SNPs | Gene Info |
| Hs.352243 | CLCNKB | Chloride channel Kb | CGAP-C-2441775 |
SNPs | Gene Info |
| Hs.502612 | HSPB7 | Heat shock 27kDa protein family, member 7 (cardiovascular) | CGAP-C-2390051 CGAP-C-2390052 CGAP-C-2390053 CGAP-C-2390054 CGAP-C-2390055 CGAP-C-2390070 CGAP-C-2390073 |
SNPs | Gene Info |
| Hs.437385 | NECAP2 | NECAP endocytosis associated 2 | CGAP-C-2448779 CGAP-C-2448783 CGAP-C-2448784 |
SNPs | Gene Info |
| Hs.597881 | CROCCL2 | Ciliary rootlet coiled-coil, rootletin-like 2 | CGAP-C-2388628 |
SNPs | Gene Info |
| Hs.252967 | C1orf144 | Chromosome 1 open reading frame 144 | CGAP-C-2422417 CGAP-C-2422419 |
SNPs | Gene Info |
| Hs.128866 | ATP13A2 | ATPase type 13A2 | CGAP-C-2397764 CGAP-C-2397765 CGAP-C-2397766 CGAP-C-2397767 CGAP-C-2397769 |
SNPs | Gene Info |
| Hs.171596 | EPHA2 | EPH receptor A2 | CGAP-C-2399745 CGAP-C-2399746 |
SNPs | Gene Info |
| Hs.389137 | MFAP2 | Microfibrillar-associated protein 2 | CGAP-C-2410131 CGAP-C-2410133 |
SNPs | Gene Info |
| Hs.522897 | EIF1AP1 | Eukaryotic translation initiation factor 1A pseudogene 1 | CGAP-C-2460101 |
SNPs | Gene Info |
| Hs.467587 | NBPF1 | Neuroblastoma breakpoint family, member 1 | CGAP-C-2403562 CGAP-C-2403567 CGAP-C-2403568 CGAP-C-2403569 CGAP-C-2403570 CGAP-C-2403571 CGAP-C-2403572 CGAP-C-2403573 CGAP-C-2467930 |
SNPs | Gene Info |
| Hs.631865 | CROCCL1 | Ciliary rootlet coiled-coil, rootletin-like 1 | CGAP-C-2443976 |
SNPs | Gene Info |
| Hs.655432 | MSTP9 | Macrophage stimulating, pseudogene 9 | CGAP-C-2447525 CGAP-C-2447526 |
SNPs | Gene Info |
| Hs.466804 | PLA2G2A | Phospholipase A2, group IIA (platelets, synovial fluid) | CGAP-C-2388638 CGAP-C-2388639 CGAP-C-2388641 |
SNPs | Gene Info |
| Hs.465924 | SDHB | Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) | CGAP-C-2430653 CGAP-C-2430654 CGAP-C-2430657 CGAP-C-2430658 |
SNPs | Gene Info |
| Hs.2149 | ACTL8 | Actin-like 8 | CGAP-C-2464516 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |