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GEO accession:
Sample GSM62199
Query DataSets for GSM62199
Status
Public on Feb 01, 2006
Title
E. coli exposed replicate 3
Sample type
RNA
Source Name
E.coli exposed 3
Organism(s)
Escherichia coli
Characteristics
E.COLI W3110
Treatment protocol
PHMB (7.5 mg/l) exposed at d600=0.2
Growth protocol
37oC, LB
Extracted molecule
total RNA
Extraction protocol
QIAGEN RNA mini prep.
Label
P33
Label protocol
as manual
Hybridization protocol
as manual
Scan protocol
BIORAD
Description
E. coli growing in exponential phase exposed to 7.5 mg/l PHMB (polyhexamethylene biguanide). test replicate 3.
Data processing
none
Submission date
Jun 23, 2005
Contact name
Michael James Allen
E-mail(s)
mija@pml.ac.uk
Organization name
Plymouth Marine Laboratory
Street address
Prospect Place
City
Plymouth
ZIP/Postal code
PL1 3DH
Country
United Kingdom
Platform ID
GPL2568
Series (1)
GSE2827
The response of E. coli to exposure to the biocide polyhexamethylene biguanide
Data table header descriptions
ID_REF
VALUE
spot intensity
Std. Deviation
standard deviation of spot intensity
X location
physical location of scanned image
Y location
physical location of scanned image
Data table
ID_REF
VALUE
Std. Deviation
X location
Y location
Genomic_DNA_Field1:A1:1_1
5759.531807
1788.997294
109.4500098
160.7500024
Genomic_DNA_Field1:A1:1_2
5826.445293
1397.679401
107.4000096
160.7000024
Field1:A1:2_1
10.10687023
14.45106787
110.5000099
159.7500024
Field1:A1:2_2
27.72773537
53.58026173
108.4500097
159.7000024
Genomic_DNA_Field1:A1:3_1
5519.29771
1202.218016
109.4000098
162.6500024
Genomic_DNA_Field1:A1:3_2
4780.195929
955.2958908
107.3500096
162.6500024
Field1:A1:4_1
14.83715013
21.95401032
110.4500099
161.6500024
Field1:A1:4_2
58.34096692
63.03600309
108.4000097
161.6500024
phoE_Field1:A10:1_1
1203.956743
320.6828126
69.20000619
160.7500024
phoE_Field1:A10:1_2
1156.366412
314.0434373
67.20000601
160.8000024
dsbC_Field1:A10:2_1
1719.557252
652.601143
70.25000628
159.7500024
dsbC_Field1:A10:2_2
1641.516539
637.9450433
68.2000061
159.8000024
b2291_(o199)_Field1:A10:3_1
7887.038168
1418.241685
69.15000618
162.8000024
b2291_(o199)_Field1:A10:3_2
7856.562341
2017.689422
67.150006
162.8500024
potD_Field1:A10:4_1
1980.229008
492.2522456
70.20000628
161.8000024
potD_Field1:A10:4_2
2168.916031
408.0595059
68.15000609
161.7000024
gatR_2_Field1:A11:1_1
957.6946565
277.7811638
64.60000578
160.7000024
gatR_2_Field1:A11:1_2
816.3664122
237.2376399
62.6000056
160.7000024
phoQ_Field1:A11:2_1
2097.62341
661.7072227
65.65000587
159.6000024
phoQ_Field1:A11:2_2
2063.071247
503.6059993
63.50000568
159.6500024
Total number of rows:
9216
Table truncated, full table size
623 Kbytes
.
Supplementary data files not provided
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