| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 165168 | hypothetical | Erum5050 | putative integral membrane protein probable integral membrane protein | len: 290 aa | Contains 5 probable transmembrane helices predicted by TMHMM2.0 at aa 10-32, 39-56, 71-90, 160-182 and 197-219 | genbank | 57239232 | YP_180368.1 | 290 | 857341 | 858213 | |
| 165169 | hypothetical | Erum5060 | putative ABC transporter, membrane-spanning protein probable ABC transporter, membrane-spanning protein | len: 266 aa | Similar to many e.g. ZNUB_ECOLI P39832 High-affinity zinc uptake system membrane protein ZnuB (261 aa) from Escherichia coli, fasta scores: E(): 1.3e-26, 33.065% identity in 248 aa overlap | Contains Pfam match to entry PF00950 ABC-3, ABC 3 transport family | Contains 7 probable transmembrane helices predicted by TMHMM2.0 at aa 9-31, 54-76, 89-111, 131-149, 177-199, 214-236 and 241-262 | genbank | 57239233 | YP_180369.1 | 266 | 858634 | 859434 | |
| 165170 | hypothetical | Erum5070 | hypothetical protein conserved hypothetical protein | len: 120 aa | Similar to several e.g. Q8UF39 Hypothetical protein Atu1561 (130 aa) from Agrobacterium tumefaciens, fasta scores: E(): 1.3e-08, 33.333% identity in 126 aa overlap | Contains Pfam match to entry PF04635 DUF598, Protein of unknown function, DUF598 | genbank | 57239234 | YP_180370.1 | 120 | 859441 | 859803 | |
| 165171 | tsf | hypothetical | Erum5080 | elongation factor Ts EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu | genbank | 57239235 | YP_180371.1 | 288 | 860209 | 861075 |
| 165172 | rpsB | hypothetical | Erum5090 | 30S ribosomal protein S2 Essential for binding of S1 to the small ribosomal subunit | genbank | 57239236 | YP_180372.1 | 286 | 861065 | 861925 |
| 165173 | maf | hypothetical | Erum5100 | putative septum formation protein Maf possible maf | possible septum formation protein Maf | len: 192 aa | Similar to many e.g. MAF_BACSU Q02169 Septum formation protein Maf (189 aa) from Bacillus subtilis, fasta scores: E(): 1.1e-14, 36.612% identity in 183 aa overlap | Contains Pfam match to entry PF02545 Maf, Maf-like protein | genbank | 57239237 | YP_180373.1 | 192 | 863542 | 864120 |
| 165174 | infA | hypothetical | Erum5110 | putative translation initiation factor IF-1 probable infA | probable translation initiation factor IF-1 | len: 82 aa | Similar to many e.g. IF1_ECOLI P02998 Translation initiation factor IF-1 (71 aa) from Escherichia coli, fasta scores: E(): 2.8e-06, 46.154% identity in 65 aa overlap | Contains Pfam match to entry PF00575 S1, S1 RNA binding domain | genbank | 57239238 | YP_180374.1 | 82 | 864113 | 864361 |
| 165175 | hypothetical | Erum5120 | putative secretion protein possible secretion protein | len: 363 aa | Similar to many uncharacterized proteins e.g. Q87LY5 Conserved hypothetical protein (371 aa) from Vibrio parahaemolyticus, fasta scores: E(): 6.3e-27, 29.191% identity in 346 aa overlap | Contains Pfam match to entry PF00529 HlyD, HlyD family secretion protein | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 13-31 | genbank | 57239239 | YP_180375.1 | 363 | 864569 | 865660 | |
| 165176 | hypothetical | Erum5130 | putative dihydrolipoamide dehydrogenase, E3 component of pyruvate or 2-oxoglutarate dehydrogenase complex probable dihydrolipoamide dehydrogenase, E3 component of pyruvate or 2-oxoglutarate dehydrogenase complex | len: 465 aa | Highly similar to many e.g. DLDH_ECOLI P00391 Dihydrolipoamide dehydrogenase (473 aa) from Escherichia coli, fasta scores: E(): 5.6e-52, 37.061% identity in 456 aa overlap | Contains Pfam match to entry PF00070 pyr_redox, Pyridine nucleotide-disulphide oxidoreductase and PF02852 pyr_redox_dim, Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | Contains PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site and PS00017 ATP/GTP-binding site motif A (P-loop) | Similar to Erum1420, Erum4941, Erum3470 | genbank | 57239240 | YP_180376.1 | 465 | 865688 | 867085 | |
| 165177 | hypothetical | Erum5140 | hypothetical protein probable exported protein | len: 389 aa | Weakly similar to several e.g. Q9HXJ7 Hypothetical protein PA3800 (380 aa) from Pseudomonas aeruginosa, fasta scores: E(): 1.9e-10, 21.407% identity in 327 aa overlap | Contains Pfam match to entry PF01011 PQQ, PQQ enzyme repeat | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.997 between residues 22 and 23 | genbank | 57239241 | YP_180377.1 | 389 | 867096 | 868265 | |
| 165178 | gpmI | hypothetical | Erum5150 | phosphoglyceromutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate | genbank | 57239242 | YP_180378.1 | 501 | 869115 | 870620 |
| 165179 | engA | hypothetical | Erum5160 | putative GTP binding protein EngA probable engA | probable GTP binding protein EngA | len: 439 aa | Similar to many e.g. ENGA_ECOLI P77254 Probable GTP-binding protein engA (490 aa) from Escherichia coli, fasta scores: E(): 3.3e-31, 37.849% identity in 465 aa overlap | Contains Pfam match to entry PF01926 MMR_HSR1, GTPase of unknown function | Contains 2 PS00017 ATP/GTP-binding site motifs A (P-loop) | Similar to Erum0400, Erum5420, Erum4490 | genbank | 57239243 | YP_180379.1 | 439 | 871977 | 873296 |
| 165180 | carA | hypothetical | Erum5170 | carbamoyl-phosphate synthase small subunit Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate | genbank | 57239244 | YP_180380.1 | 374 | 873909 | 875033 |
| 165181 | ispH | hypothetical | Erum5180 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalzes the conversion 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate | genbank | 57239245 | YP_180381.1 | 328 | 875837 | 876823 |
| 165182 | dut | hypothetical | Erum5190 | putative deoxyuridine 5'-triphosphate nucleotidohydrolase probable dut | probable deoxyuridine 5'-triphosphate nucleotidohydrolase | len: 124 aa | Similar to many e.g. DUT_ECOLI P06968 Deoxyuridine 5'-triphosphate nucleotidohydrolase (151 aa) from Escherichia coli, fasta scores: E(): 5.3e-14, 42.623% identity in 122 aa overlap. Lacks 30 amino acids at the N-terminus. | Contains Pfam match to entry PF00692 dUTPase, dUTPase | genbank | 57239246 | YP_180382.1 | 124 | 878039 | 878413 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165183 | hypothetical | Erum5200 | hypothetical protein conserved hypothetical protein | len: 203 aa | Similar to several from Alphaproteobacteria e.g. Q92HK1 Hypothetical protein RC0770 (188 aa) from Rickettsia conorii, fasta scores: E(): 3.7e-08, 32.639% identity in 144 aa overlap | genbank | 57239247 | YP_180383.1 | 203 | 879346 | 879957 | |
| 165184 | hypothetical | Erum5210 | putative type IV secretion system protein possible type IV secretion system protein | len: 2455 aa | Similar to the repetitive region of e.g. Q88XB6 Cell surface SD repeat protein precursor (3360 aa) from Lactobacillus plantarum, fasta scores: E(): 5.4e-23, 20.027% identity in 1468 aa overlap | Contains Pfam match to entry PF04610 TrbL, TrbL/VirB6 plasmid conjugal transfer protein, incomplete domain | Contains signal peptide predicted by SignalP2.0 HMM (Signal peptide probabilty 0.899) with cleavage site probability 0.583 between residues 25 and 26 | Contains 4 probable transmembrane helices predicted by TMHMM2.0 at aa 309-331, 424-446, 450-472 and 485-507 | Contains three tandem repeats, 261 bp repeated 5.1 times, 222 bp repeated 3.9 times, 180 bp repeated 1.9 times | Similar to Erum5220, Erum5230, Erum5240 | genbank | 57239248 | YP_180384.1 | 2455 | 880973 | 888340 | |
| 165185 | hypothetical | Erum5220 | putative type IV secretion system protein possible type IV secretion system protein | len: 1529 aa | Similar to the repetitive region of several e.g. Q88XB6 Cell surface SD repeat protein precursor (3360 aa) from Lactobacillus plantarum, fasta scores: E(): 4.4e-21, 26.078% identity in 487 aa overlap | Contains Pfam match to entry PF04610 TrbL, TrbL/VirB6 plasmid conjugal transfer protein | Contains 6 probable transmembrane helices predicted by TMHMM2.0 at aa 711-733, 740-759, 814-836, 843-865, 885-907 and 969-991 | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.925) with cleavage site probability 0.456 between residues 33 and 34 | Contains two tandem repeats, 216 bp repeated 2.4 times, 15 bp repeated 2.3 times | Similar to Erum5230, Erum5210, Erum5240 | genbank | 57239249 | YP_180385.1 | 1529 | 888358 | 892947 | |
| 165186 | hypothetical | Erum5230 | putative type IV secretion system protein possible type IV secretion system protein | len: 911 aa | Similar to several other rickettsial proteins e.g. Q92JC3 Hypothetical protein RC0144 (966 aa) from Rickettsia conorii, fasta scores: E(): 5.4e-22, 24.116% identity in 622 aa overlap | Contains Pfam match to entry PF04610 TrbL, TrbL/VirB6 plasmid conjugal transfer protein | Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site | Contains 7 probable transmembrane helices predicted by TMHMM2.0 at aa 534-556, 563-585, 643-665, 672-694, 704-726, 746-768 and 788-810 | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.500) with cleavage site probability 0.480 between residues 20 and 21 | Similar to Erum5220, Erum5210, Erum5240 | genbank | 57239250 | YP_180386.1 | 911 | 892949 | 895684 | |
| 165187 | virB6 | hypothetical | Erum5240 | type IV secretion system protein VirB6 virB6 | type IV secretion system protein VirB6 | len: 821 aa | Similar to several e.g. Q8RPN1 VirB6 (826 aa) from Ehrlichia chaffeensis, fasta scores: E(): 6.6e-197, 68.826% identity in 818 aa overlap | Contains Pfam match to entry PF04610 TrbL, TrbL/VirB6 plasmid conjugal transfer protein | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.954 between residues 26 and 27 | Contains 8 probable transmembrane helices predicted by TMHMM2.0 at aa 59-81, 86-108, 429-451, 536-558, 565-587, 591-613, 626-645 and 723-745 | Similar to Erum5220, Erum5230, Erum5210, Erum0760 | genbank | 57239251 | YP_180387.1 | 821 | 895822 | 898287 |
| 165188 | virB4 | hypothetical | Erum5250 | type IV secretion system protein VirB4 virB4 | type IV secretion system protein VirB4 | len: 800 aa | Highly similar to many e.g. Q8RPN2 VirB4 (800 aa) from Ehrlichia chaffeensis, fasta scores: E(): 0, 93.250% identity in 800 aa overlap | Contains Pfam match to entry PF03135 CagE_TrbE_VirB, CagE, TrbE, VirB family, component of type IV transporter system | Contains PS00017 ATP/GTP-binding site motif A (P-loop) | Similar to Erum7980 | genbank | 57239252 | YP_180388.1 | 800 | 898326 | 900728 |
| 165189 | virB3 | hypothetical | Erum5260 | type IV secretion system protein VirB3 virB3 | type IV secretion system protein VirB3 | len: 97 aa | Similar to several e.g. Q8RPN3 VirB3 (97 aa) from Ehrlichia chaffeensis, fasta scores: E(): 1.7e-39, 96.907% identity in 97 aa overlap | Contains Pfam match to entry PF05101 VirB3, Type IV secretory pathway, VirB3-like protein | Contains 2 probable transmembrane helices predicted by TMHMM2.0 at aa 21-43 and 47-69 | genbank | 57239253 | YP_180389.1 | 97 | 900728 | 901021 |
| 165190 | sodB | hypothetical | Erum5270 | superoxide dismutase [Fe] sodB | superoxide dismutase [Fe] | len: 210 aa | Similar to many e.g. SODF_ECOLI P09157 Superoxide dismutase [Fe] (192 aa) from Escherichia coli, fasta scores: E(): 8.7e-34, 47.030% identity in 202 aa overlap | Contains Pfam match to entry PF00081 sodfe, Iron/manganese superoxide dismutases, alpha-hairpin domain and PF02777 sodfe_C, Iron/manganese superoxide dismutases, C-terminal domain | Contains PS00088 Manganese and iron superoxide dismutases signature | genbank | 57239254 | YP_180390.1 | 210 | 901410 | 902042 |
| 165191 | hypothetical | Erum5280 | putative ABC transporter, membrane-spanning protein probable ABC transporter, membrane-spanning protein | len: 420 aa | C-terminus is similar to many e.g. PSTA_ECOLI P07654 Phosphate transport system permease protein (296 aa) from Escherichia coli, fasta scores: E(): 1.3e-14, 30.802% identity in 237 aa overlap | Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport system inner membrane component | Contains 6 probable transmembrane helices predicted by TMHMM2.0 at aa 29-51, 198-220, 241-263, 273-290, 336-358 and 386-408 | Similar to Erum1490 | genbank | 57239255 | YP_180391.1 | 420 | 902307 | 903569 | |
| 165192 | lipA | hypothetical | Erum5290 | lipoyl synthase Catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group | genbank | 57239256 | YP_180392.1 | 292 | 906311 | 907189 |
| 165193 | hypothetical | Erum5300 | hypothetical protein unknown | len: 464 aa | genbank | 57239257 | YP_180393.1 | 464 | 908304 | 909698 | |
| 165194 | hypothetical | Erum5310 | putative integral membrane protein probable integral membrane protein | len: 1392 aa | Contains 2 probable transmembrane helices predicted by TMHMM2.0 at aa 593-612 and 698-720 | genbank | 57239258 | YP_180394.1 | 1392 | 909761 | 913939 | |
| 165195 | bccA | hypothetical | Erum5320 | putative acetyl-/propionyl-coenzyme A carboxylase alpha chain probable bccA | probable acetyl-/propionyl-coenzyme A carboxylase alpha chain | len: 660 aa | Highly similar to many e.g. BCCA_MYCTU P46401 Acetyl-/propionyl-coenzyme A carboxylase alpha chain (654 aa) from Mycobacterium tuberculosis, fasta scores: E(): 1.3e-75, 36.567% identity in 670 aa overlap | Contains Pfam match to entry PF00289 CPSase_L_chain, Carbamoyl-phosphate synthase L chain, N-terminal domain, PF02786 CPSase_L_D2, Carbamoyl-phosphate synthase L chain, ATP binding domain, PF02785 Biotin_carb_C, Biotin carboxylase C-terminal domain and PF00364 biotin_lipoyl, Biotin-requiring enzyme | Contains PS00866 Carbamoyl-phosphate synthase subdomain signature 1, PS00867 Carbamoyl-phosphate synthase subdomain signature 2 and PS00188 Biotin-requiring enzymes attachment site | Similar to Erum6310 | genbank | 57239259 | YP_180395.1 | 660 | 914152 | 916134 |
| 165196 | rluD | hypothetical | Erum5330 | ribosomal large subunit pseudouridine synthase D rluD | ribosomal large subunit pseudouridine synthase D | len: 324 aa | Similar to many e.g. RLUD_ECOLI P33643 Ribosomal large subunit pseudouridine synthase D (326 aa) from Escherichia coli, fasta scores: E(): 2e-26, 34.740% identity in 308 aa overlap | Contains Pfam match to entry PF01479 S4, S4 domain and PF00849 PseudoU_synth_2, RNA pseudouridylate synthase | Contains PS01129 Rlu family of pseudouridine synthase signature | Similar to Erum3210 | genbank | 57239260 | YP_180396.1 | 324 | 916282 | 917256 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165197 | lysA | hypothetical | Erum5340 | putative diaminopimelate decarboxylase probable lysA | probable diaminopimelate decarboxylase | len: 420 aa | Similar to many e.g. DCDA_BACSU P23630 Diaminopimelate decarboxylase (441 aa) from Bacillus subtilis, fasta scores: E(): 1.5e-15, 30.275% identity in 436 aa overlap | Contains Pfam match to entry PF02784 Orn_Arg_deC_N, Pyridoxal-dependent decarboxylase, pyridoxal binding domain and PF00278 Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase, C-terminal sheet domain | Contains PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site and PS00636 Nt-dnaJ domain signature | genbank | 57239261 | YP_180397.1 | 420 | 919113 | 920375 |
| 165198 | rpmB | hypothetical | Erum5350 | 50S ribosomal protein L28 rpmB | 50S ribosomal protein L28 | len: 100 aa | Similar to many e.g. RL28_ECOLI P02428 50S ribosomal protein L28 (77 aa) from Escherichia coli, fasta scores: E(): 7e-05, 37.838% identity in 74 aa overlap | Contains Pfam match to entry PF00830 Ribosomal_L28, Ribosomal L28 family | genbank | 57239262 | YP_180398.1 | 100 | 923099 | 923401 |
| 165199 | priA | hypothetical | Erum5360 | primosomal protein N' priA | primosomal protein N' | len: 659 aa | Highly similar to many e.g. PRIA_ECOLI P17888 Primosomal protein N' (732 aa) from Escherichia coli, fasta scores: E(): 1.9e-58, 32.341% identity in 739 aa overlap | Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PF00271 helicase_C, Helicase conserved C-terminal domain | Contains PS00675 Sigma-54 interaction domain ATP-binding region A signature | genbank | 57239263 | YP_180399.1 | 659 | 923922 | 925901 |
| 165200 | hypothetical | Erum5370 | hypothetical protein probable exported protein | len: 325 aa | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.617) with cleavage site probability 0.588 between residues 27 and 28 | Similar to Erum3450 | genbank | 57239264 | YP_180400.1 | 325 | 927298 | 928275 | |
| 165201 | hemD | hypothetical | Erum5380 | putative uroporphyrinogen-III synthase probable hemD | probable uroporphyrinogen-III synthase | len: 242 aa | Weakly similar to several uncharacterized proteins e.g. O67647 Hypothetical protein AQ_1771 (250 aa) from Aquifex aeolicus, fasta scores: E(): 3.1e-06, 23.789% identity in 227 aa overlap and Q8YJA9 Uroporphyrinogen-III synthase (235 aa) from Brucella melitensis, fasta scores: E(): 0.00095, 22.785% identity in 237 aa overlap | Contains Pfam match to entry PF02602 HEM4, Uroporphyrinogen-III synthase HemD | genbank | 57239265 | YP_180401.1 | 242 | 928519 | 929247 |
| 165202 | hypothetical | Erum5390 | putative aminopeptidase possible aminopeptidase | len: 572 aa | Similar to many uncharacterized proteins e.g. Q8RG64 Xaa-Pro aminopeptidase (584 aa) from Fusobacterium nucleatum, fasta scores: E(): 1e-61, 33.731% identity in 587 aa overlap | Contains Pfam match to entry PF00557 Peptidase_M24 metallopeptidase family M24 | genbank | 57239266 | YP_180402.1 | 572 | 930328 | 932046 | |
| 165203 | hypothetical | Erum5400 | hypothetical protein unknown | len: 173 aa | Weakly similar to several uncharacterized proteins e.g. Y867_RICPR Q9ZC99 Hypothetical protein RP867 (231 aa) from Rickettsia prowazekii, fasta scores: E(): 6.1e-11, 41.935% identity in 124 aa overlap | Contains Pfam match to entry PF00077 rvp, Retroviral aspartyl protease | Contains PS00141 Eukaryotic and viral aspartyl proteases active site | genbank | 57239267 | YP_180403.1 | 173 | 934218 | 934739 | |
| 165204 | hypothetical | Erum5410 | hypothetical protein conserved hypothetical protein | len: 275 aa | Similar to several e.g. Q9JTU6 Hypothetical protein NMA1628 (264 aa) from Neisseria meningitidis, fasta scores: E(): 2.2e-26, 34.182% identity in 275 aa overlap | genbank | 57239268 | YP_180404.1 | 275 | 934822 | 935649 | |
| 165205 | era | hypothetical | Erum5420 | putative GTP-binding protein ERA probable era | probable GTP-binding protein ERA | len: 296 aa | Similar to many e.g. ERA_ECOLI P06616 GTP-binding protein ERA (301 aa) from Escherichia coli, fasta scores: E(): 7.9e-22, 31.317% identity in 281 aa overlap | Contains PS00017 ATP/GTP-binding site motif A (P-loop) | Similar to Erum5160 | genbank | 57239269 | YP_180405.1 | 296 | 935639 | 936529 |
| 165206 | ffh | hypothetical | Erum5430 | signal recognition particle protein ffh | signal recognition particle protein | len: 450 aa | Highly similar to many e.g. SR54_ECOLI P07019 Signal recognition particle protein (453 aa) from Escherichia coli, fasta scores: E(): 4.2e-59, 45.266% identity in 433 aa overlap | Contains Pfam match to entry PF02881 SRP54_N, SRP54-type protein, helical bundle domain, PF00448 SRP54, SRP54-type protein, GTPase domain and PF02978 SRP_SPB, Signal peptide binding domain | Contains 2 PS00017 ATP/GTP-binding site motif A (P-loop) | Similar to Erum8520 | genbank | 57239270 | YP_180406.1 | 450 | 937754 | 939106 |
| 165207 | hypothetical | Erum5440 | probable NADH-quinone oxidoreductase subunit probable NADH-quinone oxidoreductase subunit | len: 528 aa | Similar to many uncharacterized bacterial proteins e.g. Q9EV69 Putative NADH-ubiquinone oxidoreductase subunit (586 aa) from Rhizobium meliloti, fasta scores: E(): 6.9e-31, 29.890% identity in 455 aa overlap and NUOM_RICPR Q9ZCG0 NADH-quinone oxidoreductase chain M (491 aa) from Rickettsia prowazekii, fasta scores: E(): 5.3e-11, 22.439% identity in 410 aa overlap | Contains Pfam match to entry PF00361 oxidored_q1 NADH-Ubiquinone/plastoquinone (complex I), various chains | Contains PS00989 Clathrin adaptor complexes small chain signature | Contains 15 probable transmembrane helices predicted by TMHMM2.0 at aa 34-56, 63-82, 86-103, 115-137, 147-166, 178-197, 202-220, 227-246, 256-278, 299-321, 343-365, 385-407,459-481 and 504-526 | Similar to Erum4770, Erum6700, Erum4760 | genbank | 57239271 | YP_180407.1 | 528 | 939091 | 940677 | |
| 165208 | hypothetical | Erum5450 | hypothetical protein unknown | len: 264 aa | Similar to Erum5460, Erum5580, Erum5570, Erum5470 | genbank | 57239272 | YP_180408.1 | 264 | 942096 | 942890 | |
| 165209 | hypothetical | Erum5460 | hypothetical protein unknown | len: 258 aa | Similar to Erum5450, Erum5580, Erum5570, Erum5470 | genbank | 57239273 | YP_180409.1 | 258 | 943338 | 944114 | |
| 165210 | hypothetical | Erum5470 | hypothetical protein probable membrane protein | len: 158 aa | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 86-108 | Similar to Erum5580, Erum5460, Erum5570, Erum5590, Erum5450 | genbank | 57239274 | YP_180410.1 | 158 | 945747 | 946223 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165211 | hypothetical | Erum5480 | hypothetical protein probable membrane protein | len: 111 aa | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 7-24. The transmembrane helix could represent a possible N-terminal signal sequence. | genbank | 57239275 | YP_180411.1 | 111 | 946401 | 946736 | |
| 165212 | hypothetical | Erum5490 | hypothetical protein conserved hypothetical protein | len: 153 aa | Similar to many e.g. Q92J61 Hypothetical protein RC0208 (146 aa) from Rickettsia conorii, fasta scores: E(): 7.8e-12, 31.081% identity in 148 aa overlap | Contains Pfam match to entry PF03654 ARPF, Aromatic-Rich Protein Family | genbank | 57239276 | YP_180412.1 | 153 | 946862 | 947323 | |
| 165213 | dnaK | hypothetical | Erum5500 | chaperone protein DnaK dnaK | chaperone protein DnaK | len: 645 aa | Highly similar to many e.g. DNAK_ECOLI P04475 Chaperone protein dnaK (Heat shock protein 70) (637 aa) from Escherichia coli, fasta scores: E(): 7.4e-118, 61.120% identity in 643 aa overlap | Contains Pfam match to entry PF00012 HSP70, Hsp70 protein | Contains PS00297 Heat shock hsp70 proteins family signature 1, PS00329 Heat shock hsp70 proteins family signature 2 and PS01036 Heat shock hsp70 proteins family signature 3 | Similar to Erum4190 | genbank | 57239277 | YP_180413.1 | 645 | 947564 | 949501 |
| 165214 | hypothetical | Erum5510 | putative ribonuclease probable ribonuclease | len: 610 aa | Highly similar to many ribonucleases e.g. RNE_ECOLI P21513 Ribonuclease E (1061 aa) from Escherichia coli, fasta scores: E(): 1.2e-52, 38.679% identity in 530 aa overlap and RNG_ECOLI P25537 Ribonuclease G (488 aa) from Escherichia coli, fasta scores: E(): 5.3e-35, 28.305% identity in 537 aa overlap | Contains Pfam match to entry PF00575 S1, S1 RNA binding domain | genbank | 57239278 | YP_180414.1 | 610 | 949576 | 951408 | |
| 165215 | hypothetical | Erum5520 | putative integral membrane protein probable integral membrane protein | len: 111 aa | Similar to many uncharacterized proteins e.g. Q92IN7 Hypothetical protein RC0383 (111 aa) from Rickettsia conorii, fasta scores: E(): 4.3e-14, 49.020% identity in 102 aa overlap | Contains Pfam match to entry PF00420 oxidored_q2, NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | Contains 3 probable transmembrane helices predicted by TMHMM2.0 at aa 5-24, 31-53 and 73-95 | genbank | 57239279 | YP_180415.1 | 111 | 951548 | 951883 | |
| 165216 | hypothetical | Erum5530 | putative Na+/H+ antiporter subunit probable Na+/H+ antiporter subunit | len: 139 aa | Similar to several e.g. Q92IR5 Hypothetical protein RC0355 (357 aa) from Rickettsia conorii, fasta scores: E(): 8.7e-16, 37.037% identity in 135 aa overlap | Contains Pfam match to entry PF04039 MnhB, Domain related to MnhB subunit of Na+/H+ antiporter | Contains 4 probable transmembrane helices predicted by TMHMM2.0 at aa 5-27, 37-59, 66-88 and 111-133 | genbank | 57239280 | YP_180416.1 | 139 | 951978 | 952397 | |
| 165217 | hypothetical | Erum5540 | putative integral membrane protein probable integral membrane protein | len: 181 aa | Similar to several e.g. Q92IR5 Hypothetical protein RC0355 (357 aa) from Rickettsia conorii, fasta scores: E(): 1.4e-20, 43.750% identity in 176 aa overlap | Contains 6 probable transmembrane helices predicted by TMHMM2.0 at aa 6-28, 33-52, 58-80, 93-115, 130-152 and 157-176 | genbank | 57239281 | YP_180417.1 | 181 | 952390 | 952935 | |
| 165218 | hypothetical | Erum5550 | putative Na+/H+ antiporter subunit probable Na+/H+ antiporter subunit | len: 99 aa | Weakly similar to several e.g. Y354_RICCN Q92IR6 Hypothetical protein RC0354 (106 aa) from Rickettsia conorii, fasta scores: E(): 1.3e-07, 38.636% identity in 88 aa overlap | Contains Pfam match to entry PF03334 PhaG_MnhG_YufB, Na+/H+ antiporter subunit | Contains 3 probable transmembrane helices predicted by TMHMM2.0 at aa 5-27, 37-54 and 66-88. | genbank | 57239282 | YP_180418.1 | 99 | 952922 | 953221 | |
| 165219 | hypothetical | Erum5560 | putative integral membrane protein probable integral membrane protein | len: 88 aa | Weakly similar to CAD72091 Hypothetical protein (142 aa) from Rhodopirellula baltica, fasta scores: E(): 6.4e-08, 32.941% identity in 85 aa overlap | Contains Pfam match to entry PF04066 MrpF_PhaF, Multiple resistance and pH regulation protein F (MrpF/PhaF) | Contains 3 probable transmembrane helices predicted by TMHMM2.0 at aa 4-23, 30-49 and 59-81. | genbank | 57239283 | YP_180419.1 | 88 | 953218 | 953484 | |
| 165220 | hypothetical | Erum5570 | hypothetical protein unknown | len: 552 aa | Contains a tandem repeat, 183 bp repeated 3.0 times | Similar to Erum5580, Erum5460, Erum5470, Erum5450 | genbank | 57239284 | YP_180420.1 | 552 | 955819 | 957477 | |
| 165221 | hypothetical | Erum5580 | hypothetical protein unknown | len: 344 aa | Similar to Erum5470, Erum5570, Erum5460, Erum5450, Erum5590 | genbank | 57239285 | YP_180421.1 | 344 | 959222 | 960256 | |
| 165222 | hypothetical | Erum5590 | hypothetical protein unknown | len: 213 aa | Similar to Erum5580, Erum5470 | genbank | 57239286 | YP_180422.1 | 213 | 961962 | 962603 | |
| 165223 | tkt | hypothetical | Erum5600 | transketolase tkt | transketolase | len: 671 aa | Highly similar to many e.g. TKT2_ECOLI P33570 Transketolase 2 (667 aa) from Escherichia coli, fasta scores: E(): 7e-114, 47.554% identity in 654 aa overlap | Contains Pfam match to entry PF00456 transketolase, Transketolase, thiamine diphosphate binding domain, PF02779 transket_pyr, Transketolase, pyridine binding domain and PF02780 transketolase_C, Transketolase, C-terminal domain | Contains PS00801 Transketolase signature 1 and PS00802 Transketolase signature 2 | genbank | 57239287 | YP_180423.1 | 671 | 963646 | 965661 |
| 165224 | hypothetical | Erum5610 | putative carboxypeptidase possible carboxypeptidase | len: 491 aa | Similar to many uncharacterized proteins e.g. EAA25708 Thermostable carboxypeptidase (496 aa) from Rickettsia sibirica, fasta scores: E(): 4.5e-31, 25.703% identity in 498 aa overlap | Contains Pfam match to entry PF02074 Peptidase_M32, Carboxypeptidase Taq (M32) metallopeptidase | genbank | 57239288 | YP_180424.1 | 491 | 965720 | 967195 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165225 | hypothetical | Erum5620 | hypothetical protein unknown | len: 217 aa | Weakly similar to many e.g. PAL_ECOLI P07176 Peptidoglycan-associated lipoprotein precursor (173 aa) from Escherichia coli, fasta scores: E(): 3.9e-07, 38.889% identity in 108 aa overlap | Pfam match to entry PF00691 OmpA, OmpA family | genbank | 57239289 | YP_180425.1 | 217 | 967934 | 968587 | |
| 165226 | purA | hypothetical | Erum5630 | adenylosuccinate synthetase purA | adenylosuccinate synthetase | len: 430 aa | Highly similar to many e.g. PURA_ECOLI P12283 Adenylosuccinate synthetase (431 aa) from Escherichia coli, fasta scores: E(): 1.5e-73, 47.674% identity in 430 aa overlap | Contains Pfam match to entry PF00709 Adenylsucc_synt, Adenylosuccinate synthetase | Contains PS01266 Adenylosuccinate synthetase GTP-binding site and PS00513 Adenylosuccinate synthetase active site | genbank | 57239290 | YP_180426.1 | 430 | 969382 | 970674 |
| 165227 | hypothetical | Erum5640 | putative Holliday junction resolvase possible Holliday junction resolvase | len: 156 aa | Similar to many uncharacterized proteins e.g. RUVX_ECOLI P52050 Putative Holliday junction resolvase (138 aa) from Escherichia coli, fasta scores: E(): 7.5e-06, 28.030% identity in 132 aa overlap | Contains Pfam match to entry PF03652 UPF0081, Uncharacterised protein family (UPF0081) | genbank | 57239291 | YP_180427.1 | 156 | 972446 | 972916 | |
| 165228 | nrdA | hypothetical | Erum5650 | ribonucleotide-diphosphate reductase alpha subunit Catalyzes the rate-limiting step in dNTP synthesis | genbank | 57239292 | YP_180428.1 | 595 | 973299 | 975086 |
| 165229 | ispA | hypothetical | Erum5660 | putative geranyltranstransferase probable ispA | probable geranyltranstransferase | len: 276 aa | Similar to many e.g. ISPA_ECOLI P22939 Geranyltranstransferase (299 aa) from Escherichia coli, fasta scores: E(): 3.9e-22, 35.531% identity in 273 aa overlap | Contains Pfam match to entry PF00348 polyprenyl_synt, Polyprenyl synthetase | Contains PS00723 Polyprenyl synthetases signature 1 and PS00444 Polyprenyl synthetases signature 2 | Similar to Erum0600 | genbank | 57239293 | YP_180429.1 | 276 | 977138 | 977968 |
| 165230 | hypothetical | Erum5670 | hypothetical protein probable membrane protein | len: 317 aa | Almost identical to Q93FQ2 Hypothetical 13.1 kDa protein (Fragment) (115 aa) from Ehrlichia ruminantium (Gardel), fasta scores: E(): 2.2e-36, 97.391% identity in 115 aa overlap | Contains Pfam match to entry PF00254 FKBP, FKBP-type peptidyl-prolyl cis-trans isomerase | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 9-31. The transmembrane helix could represent a possible N-terminal signal sequence. | genbank | 57239294 | YP_180430.1 | 317 | 977971 | 978924 | |
| 165231 | thiO | hypothetical | Erum5680 | putative thiamine biosynthesis oxidoreductase probable thiO | probable thiamine biosynthesis oxidoreductase | len: 354 aa | Similar to several e.g. THIO_RHIET O34292 Putative thiamine biosynthesis oxidoreductase thiO (327 aa) from Rhizobium etli, fasta scores: E(): 9e-24, 34.441% identity in 331 aa overlap | Contains Pfam match to entry PF01266 DAO, FAD dependent oxidoreductase | Contains signal peptide predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.808) with cleavage site probability 0.318 between residues 23 and 24 | genbank | 57239295 | YP_180431.1 | 354 | 980636 | 981700 |
| 165232 | hypothetical | Erum5690 | putative deaminase possible deaminase | len: 145 aa | Similar to many uncharacterized proteins e.g. Y831_RICPR Q9ZCC6 Hypothetical protein RP831 (148 aa) from Rickettsia prowazekii, fasta scores: E(): 7.2e-21, 46.528% identity in 144 aa overlap | Contains Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine and deoxycytidylate deaminase zinc-binding region | The C-terminus is highly similar to Erum5681 | genbank | 57239296 | YP_180432.1 | 145 | 983373 | 983810 | |
| 165233 | hypothetical | Erum5700 | hypothetical protein probable membrane protein | len: 142 aa | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 5-27 | genbank | 57239297 | YP_180433.1 | 142 | 983952 | 984380 | |
| 165234 | dnaB | hypothetical | Erum5710 | replicative DNA helicase unwinds double stranded DNA | genbank | 57239298 | YP_180434.1 | 486 | 985870 | 987330 |
| 165235 | fabH | hypothetical | Erum5720 | 3-oxoacyl-[acyl-carrier-protein] synthase III fabH | 3-oxoacyl-[acyl-carrier-protein] synthase III | len: 319 aa | Highly similar to many e.g. FABH_ECOLI P24249 3-oxoacyl-[acyl-carrier-protein] synthase III (317 aa) from Escherichia coli, fasta scores: E(): 6.6e-48, 45.253% identity in 316 aa overlap | Contains 1 probable transmembrane helix predicted by TMHMM2.0 at aa 300-317 | genbank | 57239299 | YP_180435.1 | 319 | 989842 | 990801 |
| 165236 | plsX | hypothetical | Erum5730 | fatty acid/phospholipid synthesis protein poorly understood protein involved in fatty acid and phospholipid biosynthesis | genbank | 57239300 | YP_180436.1 | 336 | 990818 | 991828 |
| 165237 | rpmF | hypothetical | Erum5740 | 50S ribosomal protein L32 rpmF | 50S ribosomal protein L32 | len: 60 aa | Similar to many e.g. RL32_ECOLI P02435 50S ribosomal protein L32 (56 aa) from Escherichia coli, fasta scores: E(): 5e-06, 44.444% identity in 54 aa overlap | Contains Pfam match to entry PF01783 Ribosomal_L32p, Ribosomal L32p protein family | genbank | 57239301 | YP_180437.1 | 60 | 991865 | 992047 |
| 165238 | tgt | hypothetical | Erum5750 | queuine tRNA-ribosyltransferase tgt | queuine tRNA-ribosyltransferase | len: 378 aa | Similar to many e.g. TGT_ECOLI P19675 Queuine tRNA-ribosyltransferase (375 aa) from Escherichia coli, fasta scores: E(): 1.1e-27, 39.687% identity in 383 aa overlap | Contains Pfam match to entry PF01702 TGT, Queuine tRNA-ribosyltransferase | genbank | 57239302 | YP_180438.1 | 378 | 992248 | 993384 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165239 | pstB | hypothetical | Erum5760 | putative phosphate ABC transporter, ATP-binding protein probable pstB | probable phosphate ABC transporter, ATP-binding protein | len: 253 aa | Highly similar to many e.g. PSTB_ECOLI P07655 Phosphate import ATP-binding protein (256 aa) from Escherichia coli, fasta scores: E(): 2.8e-44, 51.037% identity in 241 aa overlap | Contains Pfam match to entry PF00005 ABC_tran, ABC transporter | Contains PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop) | Similar to Erum0580, Erum2550, Erum6820, Erum1190, Erum6270 | genbank | 57239303 | YP_180439.1 | 253 | 994223 | 994984 |
| 165240 | dapB | hypothetical | Erum5770 | dihydrodipicolinate reductase dapB | dihydrodipicolinate reductase | len: 264 aa | Similar to many e.g. DAPB_ECOLI P04036 Dihydrodipicolinate reductase (273 aa) from Escherichia coli, fasta scores: E(): 1.4e-25, 32.700% identity in 263 aa overlap | Contains Pfam match to entry PF05173 DapB_C, Dihydrodipicolinate reductase, C-terminus and PF01113 DapB_N, Dihydrodipicolinate reductase, N-terminus | genbank | 57239304 | YP_180440.1 | 264 | 995005 | 995799 |
| 165241 | hypothetical | Erum5780 | putative monooxygenase probable monooxygenase | len: 164 aa | Similar to many e.g. NTAB_CHEHE P54990 Nitrilotriacetate monooxygenase component B (322 aa) from Chelatobacter heintzii, fasta scores: E(): 5.3e-14, 37.342% identity in 158 aa overlap | Contains Pfam match to entry PF01613 Flavin_Reduct, Flavin reductase like domain | genbank | 57239305 | YP_180441.1 | 164 | 995796 | 996290 | |
| 165242 | ubiA | hypothetical | Erum5790 | 4-hydroxybenzoate octaprenyltransferase ubiA | 4-hydroxybenzoate octaprenyltransferase | len: 295 aa | Similar to many e.g. UBIA_ECOLI P26601 4-hydroxybenzoate octaprenyltransferase (290 aa) from Escherichia coli, fasta scores: E(): 4.1e-24, 34.066% identity in 273 aa overlap | Contains Pfam match to entry PF01040 UbiA, UbiA prenyltransferase family | Contains PS00943 UbiA prenyltransferase family signature | Contains 8 probable transmembrane helices predicted by TMHMM2.0 at aa 20-42, 52-74, 95-117, 121-140, 149-171, 175-194, 223-256 and 271-293 | Similar to Erum7750 | genbank | 57239306 | YP_180442.1 | 295 | 996344 | 997231 |
| 165243 | rpmH | hypothetical | Erum5791 | 50S ribosomal protein L34 rpmH | 50S ribosomal protein L34 | len: 44 aa | Similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa) from Escherichia coli, fasta scores: E(): 4.6e-08, 58.974% identity in 39 aa overlap | Contains Pfam match to entry PF00468 Ribosomal_L34, Ribosomal protein L34 | genbank | 57239307 | YP_180443.1 | 44 | 999433 | 999567 |
| 165244 | rnpA | hypothetical | Erum5800 | putative ribonuclease P protein component probable rnpA | probable ribonuclease P protein component | len: 122 aa | Weakly similar to e.g. RNPA_BACSU P25814 Ribonuclease P protein component (116 aa) from Bacillus subtilis, fasta scores: E(): 2.1e-05, 31.579% identity in 114 aa overlap | Contains Pfam match to entry PF00825 Ribonuclease_P, Ribonuclease P, incomplete domain | genbank | 57239308 | YP_180444.1 | 122 | 999558 | 999926 |
| 165245 | hypothetical | Erum5810 | putative integral membrane transport protein probable integral membrane transport protein | len: 437 aa | Similar to many uncharacterized proteins e.g. YAAJ_ECOLI P30143 Putative transporter yaaJ (476 aa) from Escherichia coli, fasta scores: E(): 8.5e-22, 23.288% identity in 438 aa overlap | Contains Pfam match to entry PF01235 Na_Ala_symp, Sodium:alanine symporter family | Contains 11 probable transmembrane helices predicted by TMHMM2.0 at aa 5-24, 51-73, 83-105, 133-153, 163-185, 192-214, 241-263, 291-313, 341-363, 376-398 and 402-424 | Similar to Erum3150 | genbank | 57239309 | YP_180445.1 | 437 | 999991 | 1001304 | |
| 165246 | hypothetical | Erum5820 | putative competence protein possible competence protein | len: 650 aa | Similar to several e.g. CME3_BACSU P39695 ComE operon protein 3 (776 aa) from Bacillus subtilis, fasta scores: E(): 8.9e-12, 25.451% identity in 499 aa overlap | Contains Pfam match to entry PF03772 Competence, Competence protein | Contains 12 probable transmembrane helices predicted by TMHMM2.0 at aa 4-18, 25-43, 48-70, 233-255, 275-297, 317-339, 343-365, 372-394, 398-420, 422-440, 460-482 and 487-509 | C-terminus ends within a tandem repeat, 142 bp repeated 10.2 times | genbank | 57239310 | YP_180446.1 | 650 | 1004225 | 1006177 | |
| 165247 | pheT | hypothetical | Erum5830 | phenylalanyl-tRNA synthetase beta chain pheT | phenylalanyl-tRNA synthetase beta chain | len: 789 aa | Highly similar to many e.g. SYFB_ECOLI P07395 Phenylalanyl-tRNA synthetase beta chain (795 aa) from Escherichia coli, fasta scores: E(): 1.7e-76, 31.728% identity in 810 aa overlap | Contains Pfam match to entry PF01588 tRNA_bind, Putative tRNA binding domain, PF03483 B3_4, B3/4 domain, PF03484 B5, tRNA synthetase B5 domain and PF03147 FDX-ACB, Ferredoxin-fold anticodon binding domain | genbank | 57239311 | YP_180447.1 | 789 | 1006978 | 1009347 |
| 165248 | rplQ | hypothetical | Erum5840 | 50S ribosomal protein L17 rplQ | 50S ribosomal protein L17 | len: 128 aa | Similar to many e.g. RL17_ECOLI P02416 50S ribosomal protein L17 (127 aa) from Escherichia coli, fasta scores: E(): 6.3e-18, 50.820% identity in 122 aa overlap | Contains Pfam match to entry PF01196 Ribosomal_L17, Ribosomal protein L17 | Contains PS01167 Ribosomal protein L17 signature | genbank | 57239312 | YP_180448.1 | 128 | 1009431 | 1009817 |
| 165249 | rpoA | hypothetical | Erum5850 | DNA-directed RNA polymerase alpha subunit Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | genbank | 57239313 | YP_180449.1 | 358 | 1009836 | 1010912 |
| 165250 | rpsK | hypothetical | Erum5860 | 30S ribosomal protein S11 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome | genbank | 57239314 | YP_180450.1 | 127 | 1010992 | 1011375 |
| 165251 | rpsM | hypothetical | Erum5870 | 30S ribosomal protein S13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA | genbank | 57239315 | YP_180451.1 | 123 | 1011387 | 1011758 |
| 165252 | adk | hypothetical | Erum5880 | adenylate kinase adk | adenylate kinase | len: 220 aa | Similar to many e.g. KAD_BACST P27142 Adenylate kinase (217 aa) from Bacillus stearothermophilus, fasta scores: E(): 1.6e-17, 34.906% identity in 212 aa overlap | Contains Pfam match to entry PF00406 ADK, Adenylate kinase | Contains PS00113 Adenylate kinase signature | genbank | 57239316 | YP_180452.1 | 220 | 1011817 | 1012479 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165253 | secY | hypothetical | Erum5890 | preprotein translocase SecY with SecE and SecG forms a protein-conduction channel in the inner membrane | genbank | 57239317 | YP_180453.1 | 432 | 1012464 | 1013762 |
| 165254 | rplO | hypothetical | Erum5900 | 50S ribosomal protein L15 rplO | 50S ribosomal protein L15 | len: 157 aa | Similar to many e.g. RL15_ECOLI P02413 50S ribosomal protein L15 (144 aa) from Escherichia coli, fasta scores: E(): 2e-10, 37.324% identity in 142 aa overlap | Contains Pfam match to entry PF01305 Ribosomal_L15, Ribosomal protein L15 amino terminal region | genbank | 57239318 | YP_180454.1 | 157 | 1013802 | 1014275 |
| 165255 | rpsE | hypothetical | Erum5910 | 30S ribosomal protein S5 rpsE | 30S ribosomal protein S5 | len: 174 aa | Similar to many e.g. RS5_ECOLI P02356 30S ribosomal protein S5 (166 aa) from Escherichia coli, fasta scores: E(): 5.6e-23, 46.541% identity in 159 aa overlap | Contains Pfam match to entry PF00333 Ribosomal_S5, Ribosomal protein S5, N-terminal domain and PF03719 Ribosomal_S5_C, Ribosomal protein S5, C-terminal domain | genbank | 57239319 | YP_180455.1 | 174 | 1014279 | 1014803 |
| 165256 | rplR | hypothetical | Erum5920 | 50S ribosomal protein L18 rplR | 50S ribosomal protein L18 | len: 120 aa | Similar to many e.g. RL18_BACSU P46899 50S ribosomal protein L18 (120 aa) from Bacillus subtilis, fasta scores: E(): 5.9e-08, 36.036% identity in 111 aa overlap | Contains Pfam match to entry PF00861 Ribosomal_L18p, Ribosomal L18p/L5e family | genbank | 57239320 | YP_180456.1 | 120 | 1014821 | 1015183 |
| 165257 | rplF | hypothetical | Erum5930 | 50S ribosomal protein L6 rplF | 50S ribosomal protein L6 | len: 178 aa | Similar to many e.g. RL6_ECOLI P02390 50S ribosomal protein L6 (176 aa) from Escherichia coli, fasta scores: E(): 5.1e-20, 35.795% identity in 176 aa overlap | Contains 2 Pfam matches to entry PF00347 Ribosomal_L6, Ribosomal protein L6 | genbank | 57239321 | YP_180457.1 | 178 | 1015197 | 1015733 |
| 165258 | rpsH | hypothetical | Erum5940 | 30S ribosomal protein S8 rpsH | 30S ribosomal protein S8 | len: 132 aa | Similar to many e.g. RS8_ECOLI P02361 30S ribosomal protein S8 (129 aa) from Escherichia coli, fasta scores: E(): 4.1e-17, 44.615% identity in 130 aa overlap | Contains Pfam match to entry PF00410 Ribosomal_S8, Ribosomal protein S8 | Contains PS00053 Ribosomal protein S8 signature | genbank | 57239322 | YP_180458.1 | 132 | 1015746 | 1016144 |
| 165259 | rpsN | hypothetical | Erum5950 | 30S ribosomal protein S14 rpsN | 30S ribosomal protein S14 | len: 101 aa | Similar to many e.g. RS14_ECOLI P02370 30S ribosomal protein S14 (100 aa) from Escherichia coli, fasta scores: E(): 2.6e-14, 49.000% identity in 100 aa overlap | Contains Pfam match to entry PF00253 Ribosomal_S14, Ribosomal protein S14p/S29e | Contains PS00527 Ribosomal protein S14 signature | genbank | 57239323 | YP_180459.1 | 101 | 1016165 | 1016470 |
| 165260 | rplE | hypothetical | Erum5960 | 50S ribosomal protein L5 rplE | 50S ribosomal protein L5 | len: 177 aa | Similar to many e.g. RL5_ECOLI P02389 50S ribosomal protein L5 (178 aa) from Escherichia coli, fasta scores: E(): 4.1e-35, 51.149% identity in 174 aa overlap | Contains Pfam match to entry PF00281 Ribosomal_L5, Ribosomal protein L5 and PF00673 Ribosomal_L5_C, ribosomal L5P family C-terminus | genbank | 57239324 | YP_180460.1 | 177 | 1016480 | 1017013 |
| 165261 | rplX | hypothetical | Erum5970 | 50S ribosomal protein L24 rplX | 50S ribosomal protein L24 | len: 109 aa | Similar to many e.g. RL24_ECOLI P02425 50S ribosomal protein L24 (103 aa) from Escherichia coli, fasta scores: E(): 2.1e-09, 45.370% identity in 108 aa overlap | Contains Pfam match to entry PF00467 KOW, KOW motif | Contains PS01108 Ribosomal protein L24 signature | genbank | 57239325 | YP_180461.1 | 109 | 1017023 | 1017352 |
| 165262 | rplN | hypothetical | Erum5980 | 50S ribosomal protein L14 rplN | 50S ribosomal protein L14 | len: 119 aa | Similar to many e.g. RL14_ECOLI P02411 50S ribosomal protein L14 (123 aa) from Escherichia coli, fasta scores: E(): 9e-22, 57.724% identity in 123 aa overlap | Contains Pfam match to entry PF00238 Ribosomal_L14, Ribosomal protein L14p/L23e | Contains PS00049 Ribosomal protein L14 signature | genbank | 57239326 | YP_180462.1 | 119 | 1017354 | 1017713 |
| 165263 | rpsQ | hypothetical | Erum5990 | 30S ribosomal protein S17 rpsQ | 30S ribosomal protein S17 | len: 74 aa | Similar to many e.g. RS17_ECOLI P02373 30S ribosomal protein S17 (83 aa) from Escherichia coli, fasta scores: E(): 2.3e-07, 43.662% identity in 71 aa overlap | Contains Pfam match to entry PF00366 Ribosomal_S17, Ribosomal protein S17 | genbank | 57239327 | YP_180463.1 | 74 | 1017723 | 1017947 |
| 165264 | rpmC | hypothetical | Erum5991 | 50S ribosomal protein L29 rpmC | 50S ribosomal protein L29 | len: 67 aa | Weakly similar to many e.g. RL29_ECOLI 50S ribosomal protein L29 (63 aa) from Escherichia coli, fasta scores: E(): 1.2, 25.000% identity in 60 aa overlap | Contains Pfam match to entry PF00831 Ribosomal_L29, Ribosomal protein L29 | genbank | 57239328 | YP_180464.1 | 67 | 1017940 | 1018143 |
| 165265 | rplP | hypothetical | Erum6000 | 50S ribosomal protein L16 located in the peptidyl transferase center and may be involved in peptidyl transferase activity | genbank | 57239329 | YP_180465.1 | 136 | 1018156 | 1018566 |
| 165266 | rpsC | hypothetical | Erum6010 | 30S ribosomal protein S3 rpsC | 30S ribosomal protein S3 | len: 211 aa | Highly similar to many e.g. RS3_ECOLI P02352 30S ribosomal protein S3 (232 aa) from Escherichia coli, fasta scores: E(): 9.5e-43, 54.634% identity in 205 aa overlap | Contains Pfam match to entry PF00417 Ribosomal_S3_N, Ribosomal protein S3, N-terminal domain, PF00013 KH, KH domain and PF00189 Ribosomal_S3_C, Ribosomal protein S3, C-terminal domain | Contains PS00548 Ribosomal protein S3 signature | genbank | 57239330 | YP_180466.1 | 211 | 1018579 | 1019214 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 165267 | rplV | hypothetical | Erum6020 | 50S ribosomal protein L22 rplV | 50S ribosomal protein L22 | len: 114 aa | Similar to many e.g. RL22_ECOLI P02423 50S ribosomal protein L22 (110 aa) from Escherichia coli, fasta scores: E(): 1.9e-11, 42.453% identity in 106 aa overlap | Contains Pfam match to entry PF00237 Ribosomal_L22, Ribosomal protein L22p/L17e | Contains PS00464 Ribosomal protein L22 signature | genbank | 57239331 | YP_180467.1 | 114 | 1019219 | 1019563 |