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Finding cDNAs
UGID:25595     UniGene At.41240     Arabidopsis thaliana (thale cress)   AT2G04940 Links
Scramblase-related (AT2G04940)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_565319.1 scramblase-related A. thaliana 100.0 391

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: mixed; whole plant; root; floral meristem; flower
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

NM_126526.2 Arabidopsis thaliana scramblase-related (AT2G04940) mRNA, complete cds P
AY093221.1 Arabidopsis thaliana unknown protein (At2g04940) mRNA, complete cds P
AY084226.1 Arabidopsis thaliana clone 100336 mRNA, complete sequence P
BT001240.1 Arabidopsis thaliana unknown protein (At2g04940) mRNA, complete cds P
BX820923.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX820498.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX820003.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZD07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819621.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819562.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819494.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819087.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819086.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX818960.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX819994.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P

EST sequences (10 of 22) [Show all sequences]

AA712461.1 Clone 199C5MRP mixed P
H76263.1 Clone 199C5RTM mixed P
AV788091.1 Clone RAFL06-78-B18 whole plant 3' read P
AV805655.1 Clone RAFL09-43-L12 whole plant 3' read P
AV829330.1 Clone RAFL09-43-L12 whole plant 5' read P
CK118822.1 Clone MPMGp2011M12215 floral meristem 5' read PA
BP568756.1 Clone RAFL14-63-G09 root 3' read P
BP583324.1 Clone RAFL14-40-L01 root 3' read P
BP637276.1 Clone RAFL19-05-B02 mixed 3' read P
BP823941.1 Clone RAFL22-08-A18 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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