Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss1472909	TSC-CSHL|TSC0089654		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	09/07/00	10/10/03	86	Genomic			95 %
ss5165346	TSC-CSHL|TSC0423764		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	09/19/02	10/10/03	108	Genomic			unknown
ss12098762	WI_SSAHASNP|chr10.NT_030059.10_467945		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	07/04/03	10/10/03	116	Genomic			unknown
ss15590222	SC_SNP|NT_030059.11_777913		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	11/17/03	11/22/03	120	Genomic			unknown
ss38535661	ABI|hCV172666		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	07/15/05	11/02/06	126	Genomic			unknown
ss69085047	PERLEGEN|PGP02275467		fwd/T	A/G	atgaccttggaaagccccaagtcctatggg	gcaacaggtataaataaacaagcattgaca	01/30/07	08/14/07	127	Genomic			unknown

Fasta sequence   (Legend)

 ACAGTGCTAT GCTCTTAACA GGTGCTTTAA AAAAACAGCT CTGTGGAATG ATTGACATTT
 ACATCTCTGA GCAGCTGAGC CTGGCAAGAC CTACCAAAGG GCAAGCAGGA TCCTTATATC
 TTGCAGAATA TCTTGCTAAG GAGAGCTCAG GAGGCAGAAC AGATGGACAC ACCTCAAATT
 CATTCTCTGA TATGACCCGT GCTACACCAA GCACCTACTC TGTGCCAAGC CCTGCATTGA
 AGGCAAGTAT GAGACAGCAG ACAAGGCCAG ATGACCTTGG AAAGCCCCAA GTCCTATGGG
 R
 GCAACAGGTA TAAATAAACA AGCATTGACA TCCATAAAGA ATTCCAACCT TTGAGAGTAA
 CTGTGTGTGA TGATGTGTTC ATAATTTTGA TTGTGGAAAT TATTACACAG TATATACATA
 TAGCAAATCA CATTATATAC CTTGAATACA TACAATTTTT ATTTGTCAAT TATACCTTAA
 TGAAGCTGGG GAAAAAAGCT TTCTTATTTG GGTTGATACA TCATCTTCAG AGTGTGAGCA
 ATAGAATTAT TGCCATAACA TTATTATTAA TAATTAATGA AAATATTTAG TTATTTAAAG

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss38535661	HapMap-CEU	European	120	IG	0.050	0.450	0.500	0.343	0.275	0.725
	HapMap-HCB	Asian	90	IG	0.156	0.578	0.267	0.254	0.444	0.556
	HapMap-JPT	Asian	90	IG	0.178	0.378	0.444		0.367	0.633
	HapMap-YRI	Sub-Saharan African	120	IG	0.017	0.367	0.617	0.273	0.200	0.800
ss69085047	HapMap-CEU	European	120	GF	0.050	0.450	0.500		0.275	0.725
	HapMap-HCB	Asian	90	GF	0.156	0.578	0.267		0.444	0.556
	HapMap-JPT	Asian	90	GF	0.178	0.378	0.444		0.367	0.633
	HapMap-YRI	Sub-Saharan African	120	GF	0.017	0.367	0.617		0.200	0.800

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN