946 - tassel primordium prepared by Schmidt lab

Library Description

Organism:	Zea mays
Cultivar:	OH43
Developmental stage:	just after the transition from vegetative to inflorescence development
Organ:	tassels
Tissue:	tassels
Vector:	HybriZAP
Vector type:	phagemid
Cloning site 1:	EcoRI
Cloning site 2:	XhoI
Lab host:	XLOLR

George Chuck dissected immature tassels between 1mm and 3mm. Sharon Stanfield prepared the cDNA library in HybriZAP. Sample insert size range was 350 bp to 3 Kb with a 1 Kb average.

Source: Walbot V, Stanford University

Gene Content Analysis

20,412 ESTs from this library were grouped into 6,361 UniGene entries (putative genes) [UniGene build #74, 02-Dec-2008]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM	UniGene Entry
451	22095	Zm.23253	Histone H4 (H4C14), mRNA.
118	5781	Zm.29304	Hypothetical protein LOC100192589 (LOC100192589), mRNA.
104	5095	Zm.84250	Clone 324951 mRNA sequence.
85	4164	Zm.93694	Clone 1290437 unknown mRNA.
78	3821	Zm.19682	Hypothetical protein LOC100193556 (LOC100193556), mRNA.
77	3772	Zm.12584	Clone 1511555 mRNA sequence.
75	3674	Zm.8152	Hypothetical protein LOC100192746 (LOC100192746), mRNA.
63	3086	Zm.82266	Clone 1472828 mRNA sequence.
58	2841	Zm.93669	Clone 1706530 mRNA sequence.
57	2792	Zm.81799	Clone 1286108 unknown mRNA.
56	2743	Zm.72543	Clone 1704003 mRNA sequence.
53	2597	Zm.5973	Clone 320173 mRNA sequence.
51	2499	Zm.67921	Clone 1470257 mRNA sequence.
50	2450	Zm.93780	Clone 1282294 unknown mRNA.
50	2450	Zm.80498	Clone 1705970 mRNA sequence.
50	2450	Zm.72311	Clone 259872 mRNA sequence.
44	2156	Zm.86192	Clone 1436288 unknown mRNA.
43	2107	Zm.93704	Histone H2B.2 (LOC100193014), mRNA.
42	2058	Zm.93763	Clone 207833 unknown mRNA.
42	2058	Zm.93705	Clone 1379435 unknown mRNA.
42	2058	Zm.20180	Clone 208460 unknown mRNA.
41	2009	Zm.94087	Clone 325403 mRNA sequence.
41	2009	Zm.70437	Clone 1472803 mRNA sequence.
37	1813	Zm.82386	Clone 1470032 mRNA sequence.
37	1813	Zm.6905	Clone 210720 mRNA sequence.
36	1764	Zm.67182	Hypothetical protein LOC100194401 (LOC100194401), mRNA.
35	1715	Zm.82214	Hypothetical protein LOC100192949 (LOC100192949), mRNA.
34	1666	Zm.79462	Hypothetical protein LOC100192516 (LOC100192516), mRNA.
34	1666	Zm.78127	Clone 1478218 mRNA sequence.
33	1617	Zm.94368	Clone 311734 mRNA sequence.
33	1617	Zm.56887	Clone 1471476 mRNA sequence.
33	1617	Zm.32162	Hypothetical protein LOC100194153 (LOC100194153), mRNA.
32	1568	Zm.8612	Clone 1061943 unknown mRNA.
31	1519	Zm.7127	Clone 1479576 mRNA sequence.
30	1470	Zm.121690	Transcribed locus, strongly similar to NP_001131654.1 hypothetical protein LOC100193014 [Zea mays].
29	1421	Zm.86906	Hypothetical protein LOC100193874 (LOC100193874), mRNA.
28	1372	Zm.72831	Clone 235328 mRNA sequence.
27	1323	Zm.93635	Clone 1479386 mRNA sequence.
27	1323	Zm.80511	Clone 1474121 mRNA sequence.
26	1274	Zm.95245	Transcribed locus, strongly similar to NP_001054458.1 Os05g0113900 [Oryza sativa (japonica cultivar-group)].
26	1274	Zm.80638	Clone 1443812 mRNA sequence.
26	1274	Zm.7082	Hypothetical protein LOC100194344 (LOC100194344), mRNA.
26	1274	Zm.24801	Clone 220230 mRNA sequence.
26	1274	Zm.16740	Clone 230273 mRNA sequence.
25	1225	Zm.93597	General regulatory factor1 (grf1), mRNA.
25	1225	Zm.84121	Clone 1469308 mRNA sequence.
25	1225	Zm.16065	Clone 323328 mRNA sequence.
24	1176	Zm.91348	Clone 1279828 unknown mRNA.
24	1176	Zm.73770	Clone EL01N0520C02.d mRNA sequence.
24	1176	Zm.6369	Clone 1372320 unknown mRNA.
24	1176	Zm.6183	Clone 229229 unknown mRNA.
24	1176	Zm.31271	Hypothetical protein LOC100192550 (LOC100192550), mRNA.
24	1176	Zm.16540	Clone 1468946 mRNA sequence.
23	1127	Zm.93853	Clone 1468743 mRNA sequence.
23	1127	Zm.93823	Hypothetical protein LOC100193269 (LOC100193269), mRNA.
23	1127	Zm.92796	Clone 1394037 unknown mRNA.
23	1127	Zm.15863	Clone 1281501 unknown mRNA.
23	1127	Zm.12583	Clone 1368005 mRNA sequence.
23	1127	Zm.102530	Clone 291258 unknown mRNA.
22	1078	Zm.93683	Clone 277006 unknown mRNA.
22	1078	Zm.85755	Clone 894480 mRNA sequence.
22	1078	Zm.72675	Clone 1623573 unknown mRNA.
22	1078	Zm.72560	Hypothetical protein LOC100193571 (LOC100193571), mRNA.
22	1078	Zm.14710	Clone 1412707 mRNA sequence.
22	1078	Zm.13947	Hypothetical protein LOC100193883 (LOC100193883), mRNA.
22	1078	Zm.122153	Clone 296589 mRNA sequence.
22	1078	Zm.118226	Clone 208492 mRNA sequence.
21	1029	Zm.84512	Clone 1703443 mRNA sequence.
21	1029	Zm.82576	Clone 218074 mRNA sequence.
21	1029	Zm.7056	Clone 257661 mRNA sequence.
21	1029	Zm.68107	Clone 1278371 unknown mRNA.
21	1029	Zm.66604	Hypothetical protein LOC100191912 (LOC100191912), mRNA.
21	1029	Zm.20148	Clone 645166 mRNA sequence.
21	1029	Zm.20030	Hypothetical protein LOC100192600 (LOC100192600), mRNA.
20	980	Zm.94182	Clone 230424 unknown mRNA.
20	980	Zm.93668	Clone 697787 unknown mRNA.
20	980	Zm.87052	Clone 1473944 mRNA sequence.
20	980	Zm.84669	Clone 208113 unknown mRNA.
20	980	Zm.84454	Hypothetical protein LOC100194224 (LOC100194224), mRNA.
20	980	Zm.81469	Clone 3256 mRNA sequence.
20	980	Zm.81447	Clone 238515 mRNA sequence.
20	980	Zm.81251	Clone 1472636 mRNA sequence.
19	931	Zm.93753	Clone 451113 mRNA sequence.
19	931	Zm.93687	Clone 1626763 mRNA sequence.
19	931	Zm.9197	Clone 1000184 unknown mRNA.
19	931	Zm.31552	Hypothetical protein LOC100193413 (LOC100193413), mRNA.
18	882	Zm.95478	Clone 1632776 mRNA sequence.
18	882	Zm.94659	Clone 234902 mRNA sequence.
18	882	Zm.94122	Clone 210454 mRNA sequence.
18	882	Zm.93685	Clone 1283811 unknown mRNA.
18	882	Zm.92368	Clone 1216993 unknown mRNA.
18	882	Zm.85216	Clone 289947 mRNA sequence.
18	882	Zm.81280	Clone 207950 mRNA sequence.
18	882	Zm.80691	Clone 1283595 unknown mRNA.
18	882	Zm.6651	Clone 1458319 unknown mRNA.
18	882	Zm.2052	Clone 1292186 unknown mRNA.
18	882	Zm.16530	Clone 1471351 mRNA sequence.
18	882	Zm.119190	Clone 497558 mRNA sequence.
18	882	Zm.10582	Clone 1473984 mRNA sequence.
18	882	Zm.10101	Clone 1376614 unknown mRNA.