STM1521
6 hits
221 letters
hsa 
76 _ Hs13376844 (420) KOG2177
dme 
68 _ 7294194 (1023) KOG0505
cel 
65 CE01564 (490)
hsa 64 _ Hs12383074 (874) KOG2277
cel 64 CE19138 (139)
hsa 63 _ Hs4506355 (1482) KOG1366
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= STM1521
(221 letters)
Database: kyva
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
Hs13376844 34 0.26
7294194 31 2.2
CE01564 30 4.9
Hs12383074 29 6.4
CE19138 29 6.4
Hs4506355 29 8.4
# >Hs13376844
# Length = 420
#
# Score = 33.9 bits (76), Expect = 0.26
# Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
#
# Query: 72 SIPGLRIAGGLIVAFIGFRMLFPQQKAHESPEAKSKSEELADEPTANIAFVPLAMPSTAG 131
# +IPG + A +G + ++ P A+SK+ + E A+ +++ + P G
# Sbjct: 17 AIPGEGRKAAKVNAGVGEKGIYTASSRGGPPSARSKAVTVVAEGAASRSWLSMDAPEL-G 75
#
# Query: 132 PGTIAMIISSASTVRHGGEFPDWVIMVAPPIIFLAVAVILWGCLRSSG 179
# PG + + A+ GG F D V++ A WG ++G
# Sbjct: 76 PGLVERLEQLATCPLCGGSFEDPVLLACEHSFCRACLARRWGTPPATG 123
#
#
# >7294194
# Length = 1023
#
# Score = 30.8 bits (68), Expect = 2.2
# Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
#
# Query: 102 PEAKSKSEELADEPT-ANIAFVPLAMPSTAGPGTIAMIISSASTVRHGGEFP 152
# P AKS SE+ ++EP A +PL +P+ A P T A+ SSA+T E P
# Sbjct: 690 PVAKSSSEDKSEEPPHARPTDLPL-IPAPAAPSTEAIKSSSAATTPAALESP 740
#
#
# >CE01564
# Length = 490
#
# Score = 29.6 bits (65), Expect = 4.9
# Identities = 19/53 (35%), Positives = 30/53 (55%), Gaps = 4/53 (7%)
#
# Query: 94 PQQKAHESPEAKSKSEELADEPTANIAFVPL--AMPSTAGPGTIAMIISSAST 144
# P++ ESPE K ++LA P A I+F L + +T+GP T+ SS ++
# Sbjct: 258 PKKPLEESPEKKKMKDDLA--PPAAISFSKLSPSTVTTSGPSTVDTTGSSGNS 308
#
#
# >Hs12383074
# Length = 874
#
# Score = 29.3 bits (64), Expect = 6.4
# Identities = 30/119 (25%), Positives = 49/119 (40%), Gaps = 4/119 (3%)
#
# Query: 18 LANPLTTVALFLGLAGNMNSAERNRQSYMASVYVFAIMMVAYYAGQLVMNTFGISIPGLR 77
# LA A + L G +E RQ V + + ++ G V++ FG SI
# Sbjct: 153 LAEAADVGAQMIKLVGLRELSEAERQLRSLVVALMQEVFTEFFPG-CVVHPFGSSINSFD 211
#
# Query: 78 IAGGLIVAFIGFRMLFPQQKAHESPEAKSKSEELAD--EPTANIAFVPLAMPSTAGPGT 134
# + G + F+ L Q ++PE+ S LA +P A +A P + P + P +
# Sbjct: 212 VHGCDLDLFLDLGDLEEPQPVPKAPESPSLDSALASPLDPQA-LACTPASPPDSQPPAS 269
#
#
# >CE19138
# Length = 139
#
# Score = 29.3 bits (64), Expect = 6.4
# Identities = 18/74 (24%), Positives = 32/74 (42%), Gaps = 11/74 (14%)
#
# Query: 91 MLFPQQKAH--------ESPEAKSKSEELADEPTANIAFVPLAMPSTAGPGTIAMIISSA 142
# M F +++ H +PE+++KS E+ N+ P+A P ++
# Sbjct: 1 MTFEEKRKHLETTYPNKRTPESRAKSREILKLIADNLEMFPIASPESSSSKAKT---DPM 57
#
# Query: 143 STVRHGGEFPDWVI 156
# S + HG EF D +
# Sbjct: 58 SRLEHGSEFNDLTV 71
#
#
# >Hs4506355
# Length = 1482
#
# Score = 28.9 bits (63), Expect = 8.4
# Identities = 11/32 (34%), Positives = 20/32 (62%)
#
# Query: 173 GCLRSSGAIMRLVGKGGIEAISRLMGFLLVCM 204
# GC RSSG+++ KGG+E + L ++ + +
# Sbjct: 1084 GCFRSSGSLLNNAIKGGVEDEATLSAYVTIAL 1115
#
#
Database: kyva
Posted date: Nov 11, 2002 5:09 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.327 0.141 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,277,842
Number of Sequences: 112920
Number of extensions: 673230
Number of successful extensions: 2317
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2313
Number of HSP's gapped (non-prelim): 6
length of query: 221
length of database: 47,500,486
effective HSP length: 105
effective length of query: 116
effective length of database: 35,643,886
effective search space: 4134690776
effective search space used: 4134690776
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
S2: 63 (28.9 bits)