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BUILD 129
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Reference SNP(refSNP) Cluster Report: rs34630347          
refSNP ID: rs34630347
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:126/129
Map to Genome Build:36.3
Allele
Variation Class:DIP:
deletion/insertion polymorphism
RefSNP Alleles:-/T
Ancestral Allele:Not available
Clinical Association:unknown
HGVS Names
Links

SNP Details are organized in the following sections:
Submission Fasta Resource GeneView Map Diversity Validation

  Submitter records for this RefSNP Cluster back to top
The submission ss40784483 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs34630347 during BLAST analysis for the current build.

NCBI
Assay ID		Handle|Submitter IDValidation
Status		ss to rs
Orientation
/Strand		Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date		Update
Date		Build
Added		Molecule
Type		Freq
Warning		Ancestral
Allele		Success
Rate
ss40784483ABI|hCV34252286fwd/-/Tacacctggctaatttttgtattttttttttagcagggacagggcttcgctacgttggcca07/17/0507/17/05126Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs34630347|allelePos=301|totalLen=601|taxid=9606|snpclass=2|alleles='-/T'|mol=Genomic|build=126
 TCAAAGTGTC CTGTAGCTGT CAATGGCCAC AGCTGGGTGT GTTTTTGTGT TCTTGGTGTC
 TTTTCACGTC TATGTCCATG TGTTCCTATA TGACACAGTC GCTGAGAATG CCTGAGAATG
 CCTAAGTGTG CACTTTTTTT TTTTTTTTTT TGAGACTGAG TCTTGCTCTG TCACACAGGC
 TGGAGTGCAG TGGTGTGATC TTGGCTCACC GCGACCTCCA CCTCCCAGGT TCAGCCTCCC
 GAGTAGCTGG GATTACAGGT GTCAGCCACC ACACCTGGCT AATTTTTGTA TTTTTTTTTT
 N
 AGCAGGGACA GGGCTTCGCT ACGTTGGCCA GGCTGGTCTC AAACTCCTGA CCTCAAGTGA
 TCCGCCCGCC TCAGCCTCCC AAAGTGCTGG GATTATAGGC ATGAGCCACC ACACCTGGCC
 TATGTGAGTG CACAATTCTG TATCCAAACG TGTATGAGTG GATCTGTGTA CCTCTGTACA
 CCTGTATGGT GTACAGGGGC ATTCCTCTAC GTACAGATGA GTGTCTGTGT GACTGTGGCT
 GGTGTGGGTC TCCAAGTTTG TCTACTGTGT CTCTTTGTAC ACCCGTGTGT CTACACATCG

  GeneView back to top
GeneView via analysis of contig annotation: PYY peptide YY
View variations for gene:
Include clinically associated: in gene region cSNP has frequency double hit
Group
Label		Contig->mRNAGene Model (contig mRNA transcript) Color Legend
referenceNT_010783->NM_004160
function
"
Group
label		Contig-->mRNA-->ProteinContig
position		mRNA
orientation		mRNA
pos		FunctiondbSNP
allele		Protein
residue		Codon
pos		Amino acid
pos
referenceNT_010783->NM_004160->NP_004151731907reverseintron

GeneView: no link established by BLAST analysis of mRNA sequences
  Integrated Maps: back to top
NCBI MapViewer:  rs34630347 maps exactly once on NCBI human chromosome 17
ChromosomeContig
accession		Contig
position		Chromosome
position		Hit
orientation		Contig
Allele		Assembly
Type		Group
label		Contig
label		Neighbor
SNP		SNP_flank
position
17NW_001838437.2145589637842431minusAalt_assembly_8HuRefHuRefview300
17NW_926839.167323038786189plusTalt_assembly_1CeleraCeleraview300
17NT_010783.1473190739433628plusTref_assemblyreferencereferenceview300

  NCBI Resource Links back to top
Submitter-Referenced
dbSNP Blast Analysis

  Population Diversity back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation		PCR results confirmed
in multiple reactions		Homozygotes detected
in individual genotype data
UNKNOWNUNKNOWNUNKNOWN

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Revised: May 25, 2006 1:38 PM .