Ureidopropionase, beta (Upb1)

Restricted Expression:

kidney [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

liver; kidney; mixed; uncharacterized tissue; testis

NCBI

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Finding cDNAs

UGID:382876 UniGene Rn.11110 Rattus norvegicus (Norway rat) Upb1

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Ureidopropionase, beta (Upb1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_446297.1	ureidopropionase, beta	R. norvegicus	100.0	392
NP_598756.1	ureidopropionase, beta	M. musculus	98.2	392
NP_057411.1	beta-ureidopropionase	H. sapiens	87.0	383
NP_955910.1	beta-ureidopropionase	D. rerio	79.4	383
NP_001087502.1	MGC82230 protein	X. laevis	79.1	382
NP_649732.1	pyd3	D. melanogaster	67.8	385
NP_201242.2	BETA-UP (BETA-UREIDOPROPIONASE); beta-ureidopropionase	A. thaliana	66.7	384
NP_495261.1	hypothetical protein F13H8.7	C. elegans	66.3	386
XP_001689968.1	beta-ureidopropionase	C. reinhardtii	64.0	380

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	20
Map position:	20p12
UniSTS entry:		RH131237
UniSTS entry:		RH141685

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

M97662.1	Rattus norvegicus beta-alanine synthase mRNA, complete cds	PAM
NM_053845.1	Rattus norvegicus ureidopropionase, beta (Upb1), mRNA	PA
BC078767.1	Rattus norvegicus ureidopropionase, beta, mRNA (cDNA clone MGC:93280 IMAGE:7130296), complete cds	PA

EST sequences (10 of 47) [Show all sequences]

AA891954.1	Clone RKIAK01	kidney	3' read	P
AI044976.1	Clone UI-R-C1-ke-a-12-0-UI	mixed	3' read	A
AI059491.1	Clone UI-R-C1-lg-g-01-0-UI	mixed	3' read	PA
AI168961.1	Clone RKIBL22	kidney	3' read	PA
AI169357.1	Clone RKIBR26	kidney	3' read	PA
BF546463.1	Clone UI-R-C1-ke-a-12-0-UI	mixed	5' read	P
BF549551.1	Clone UI-R-C1-lg-g-01-0-UI	mixed	5' read	P
BI281865.1	Clone UI-R-CU0s-cbt-e-03-0-UI	kidney	3' read	PA
BI283141.1	Clone UI-R-CU0s-cca-e-06-0-UI	kidney	3' read	PA
CK471239.1	Clone IMAGE:7126026	kidney	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria