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UniSTS:71533 Links
SGC31622
Homo sapiens chromosome 22;11, loci SLC25A1 and LOC100131457
Macaca mulatta chromosome 10;1, loci SLC25A1 and LOC695722
Pan troglodytes chromosome 22;11, loci LOC749107 and SLC25A1

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TGCAGTAGTGCCAAAAGGC
Reverse primer:GGTCACGTGACACAGAACATG
PCR product size:202 (bp), Homo sapiens
GenBank Accession:G26811 U25147

   Homo sapiens
Name: SGC31622
Also known as: STS_U25147
Polymorphism info:  

Cross References Help
Gene GeneID:100131457
 Symbol:LOC100131457
 Description:similar to Solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
 Position:11q14.2
Gene GeneID:6576
 Symbol:SLC25A1
 Description:solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
 Position:22q11.21
UniGeneHs.111024 Solute carrier family 25 (mitochondrial carrier; citrate transporter), membe...
 Hs.611480 Transcribed locus

Mapping InformationHelp
SGC31622 Sequence Map: Chr 11|HuRef Map Viewer
  Position: 81943953-81944201 (bp)
 
SGC31622 Sequence Map: Chr 11|Celera Map Viewer
  Position: 82956057-82956305 (bp)
 
SGC31622 Sequence Map: Chr 11 Map Viewer
  Position: 85324424-85324672 (bp)
 
SGC31622 Sequence Map: Chr 22 Map Viewer
  Position: 17543368-17543569 (bp)
 
SGC31622 Sequence Map: Chr 22|HuRef Map Viewer
  Position: 2784445-2784646 (bp)
 
SGC31622 Sequence Map: Chr 22|Celera Map Viewer
  Position: 3015313-3015548 (bp)
 
SGC31622 Whitehead-RH Map: Chr 22 Map Viewer
  Position: 1.8 (cR3000)
  Lod score: P>3.00
 
SGC31622 GeneMap99-GB4 Map: Chr 22 Map Viewer
  Position: 2.63 (cR3000)
  Lod score: 0.07
  Reference Interval: pTEL-D22S420

Electronic PCR results Help
RefSeq mRNA (1)
NM_005984.1 1111 .. 1346 (236 bp)  
 
mRNA (5 of 6)[Show All Hits]
U25147.1 1084 .. 1285 (202 bp)  
L77567.1 1082 .. 1283 (202 bp)  
BC004980.1 1063 .. 1298 (236 bp)  
L75823.1 1111 .. 1346 (236 bp)  
BC008061.2 1065 .. 1300 (236 bp)  
 
Genomic (5 of 17)[Show All Hits]
G26811.1 77 .. 278 (202 bp)  
L77569.1 418 .. 619 (202 bp)  
AC004463.2 32869 .. 33070 (202 bp)  
AP000767.4 3667 .. 3915 (249 bp)  
L76134.1 2883 .. 3084 (202 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (5)
AC016486.4 140655 .. 140903 (249 bp)  
AP000645.2 13392 .. 13640 (249 bp)  
AL359537.4 15785 .. 16020 (236 bp)  
AC055755.9 140238 .. 140486 (249 bp)  
AL391096.11 85589 .. 85824 (236 bp)  
 
Low-pass Sequence Sampling (from GenBank HTGS division) (1)
AC015695.3 79129 .. 79377 (249 bp)  
 
ESTs (5 of 135)[Show All Hits]
T50580.1 81 .. 283 (203 bp)  
AA251179.1 150 .. 351 (202 bp)  
AA291975.1 94 .. 294 (201 bp)  
AA410707.1 95 .. 296 (202 bp)  
AA932897.1 270 .. 471 (202 bp)  
 
Whole Genome Shotgun sequences (5 of 8)[Show All Hits]
AADD01173327.1 14726 .. 14961 (236 bp)  
AADD01117852.1 13069 .. 13317 (249 bp)  
AADC01143075.1 173876 .. 174111 (236 bp)  
AADC01100526.1 6812 .. 7060 (249 bp)  
AADB02020420.1 485639 .. 485874 (236 bp)  
 

   Macaca mulatta
Name: SGC31622
Polymorphism info:  

Cross References Help
Gene GeneID:695722
 Symbol:LOC695722
 Description:similar to sex comb on midleg homolog 1
 Position: 
Gene GeneID:719075
 Symbol:SLC25A1
 Description:solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
 Position: 
UniGeneMmu.10146 Solute carrier family 25 (mitochondrial carrier; citrate transporter), membe...

Mapping InformationHelp
SGC31622 Sequence Map: Chr 1 Map Viewer
  Position: 43978665-43978915 (bp)
 
SGC31622 Sequence Map: Chr 10 Map Viewer
  Position: 63218842-63219070 (bp)

   Pan troglodytes
Name: SGC31622
Polymorphism info:  

Cross References Help
Gene GeneID:458647
 Symbol:SLC25A1
 Description:solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
 Position: 
Gene GeneID:749107
 Symbol:LOC749107
 Description:similar to mitochondrial citrate transport protein
 Position: 

Mapping InformationHelp
SGC31622 Sequence Map: Chr 11 Map Viewer
  Position: 84547979-84548227 (bp)
 
SGC31622 Sequence Map: Chr 22 Map Viewer
  Position: 17613790-17614025 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_001165281.1 1173 .. 1408 (236 bp)  
XM_514976.2 1158 .. 1393 (236 bp)  
XM_001165211.1 1243 .. 1478 (236 bp)  
 
Genomic (2)
CM000335.1 17613790 .. 17614025 (236 bp)  
CM000325.1 84547979 .. 84548227 (249 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC214967.1 87972 .. 88207 (236 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AC129838.77 20830 .. 21065 (236 bp)  
 
Whole Genome Shotgun sequences (4)
AADA01255162.1 20856 .. 21091 (236 bp)  
AADA01219588.1 8532 .. 8780 (249 bp)  
AACZ02193952.1 17595 .. 17830 (236 bp)  
AACZ02126917.1 23570 .. 23818 (249 bp)  
 

 

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