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An organized view of the transcripome



Library:6830 (dbEST ID)

TP

Library Description

Organism:Homo sapiens
Developmental stage:Adult
Tissue:pituitary tumor
Vector:pTriplEx2
Cloning site 1:sfiIA
Cloning site 2:sfiIB
Lab host:BM25.8

Source: Qinghua Zhang, Shanghai Institute of Endocrinology, Rui-Jin Hospital

Gene Content Analysis

722 ESTs from this library were grouped into 393 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
1 1385 Hs.710979 Hypothetical protein LOC100128444.
1 1385 Hs.710718 Hypothetical protein LOC100130107.
1 1385 Hs.709581 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae).
1 1385 Hs.709491 Hypothetical LOC645513.
1 1385 Hs.708738 Heterogeneous nuclear ribonucleoprotein C (C1/C2).
1 1385 Hs.707724 Transcribed locus, strongly similar to NP_000961.2 ribosomal protein L6 [Homo sapiens].
1 1385 Hs.707466 CDV3 homolog (mouse).
1 1385 Hs.706998 Transcribed locus, strongly similar to NP_056515.2 HIRA interacting protein 5 isoform 1 [Homo sapiens].
1 1385 Hs.706903 Transcribed locus.
1 1385 Hs.706276 Transcribed locus.
1 1385 Hs.704007 Reticulon 4.
1 1385 Hs.702192 Mitochondrial ribosomal protein S14.
1 1385 Hs.702021 Heat shock 70kDa protein 8.
1 1385 Hs.701977 Nuclear receptor subfamily 2, group F, member 2.
1 1385 Hs.701394 Transcribed locus, moderately similar to NP_989488.2 eukaryotic translation elongation factor 1 alpha 1 [Gallus gallus].
1 1385 Hs.699980 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa.
1 1385 Hs.692311 Transcribed locus.
1 1385 Hs.692084 Transcribed locus.
1 1385 Hs.690812 Transcribed locus, strongly similar to XP_001130201.2 PREDICTED: hypothetical protein [Homo sapiens].
1 1385 Hs.690605 Transcribed locus.
1 1385 Hs.689205 Transcribed locus.
1 1385 Hs.6891 Splicing factor, arginine/serine-rich 6.
1 1385 Hs.687062 Transcribed locus.
1 1385 Hs.684965 Transcribed locus.
1 1385 Hs.682026 Transcribed locus.
1 1385 Hs.678016 Transcribed locus.
1 1385 Hs.677358 CDNA: FLJ22006 fis, clone HEP06915.
1 1385 Hs.677005 Transcribed locus.
1 1385 Hs.677004 Transcribed locus.
1 1385 Hs.677003 Transcribed locus.
1 1385 Hs.677002 Transcribed locus.
1 1385 Hs.677001 Transcribed locus.
1 1385 Hs.677000 Transcribed locus.
1 1385 Hs.676998 Transcribed locus.
1 1385 Hs.676997 Transcribed locus.
1 1385 Hs.676996 Transcribed locus.
1 1385 Hs.676483 Transcribed locus, strongly similar to NP_038691.1 splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus].
1 1385 Hs.676470 CDNA FLJ11511 fis, clone HEMBA1002189.
1 1385 Hs.675541 CDNA FLJ44360 fis, clone TRACH3007541.
1 1385 Hs.674451 CDNA FLJ30400 fis, clone BRACE2008420.
1 1385 Hs.673641 Transcribed locus.
1 1385 Hs.671091 Transcribed locus.
1 1385 Hs.669214 Transcribed locus.
1 1385 Hs.668497 Zinc finger and BTB domain containing 37.
1 1385 Hs.667337 Transcribed locus.
1 1385 Hs.661823 MRNA; cDNA DKFZp686E1249 (from clone DKFZp686E1249).
1 1385 Hs.660152 Full length insert cDNA clone ZD41C11.
1 1385 Hs.659782 Transcribed locus.
1 1385 Hs.659337 Homeobox A3.
1 1385 Hs.658253 Transcribed locus.
1 1385 Hs.657419 Transcribed locus, strongly similar to XP_001140330.1 PREDICTED: similar to ankyrin repeat domain 10 isoform 3 [Pan troglodytes].
1 1385 Hs.656958 CDNA clone IMAGE:4798675.
1 1385 Hs.656811 Transcribed locus.
1 1385 Hs.656191 Transcribed locus.
1 1385 Hs.655941 RAS p21 protein activator 2.
1 1385 Hs.655855 Hypothetical protein LOC100131067.
1 1385 Hs.655676 CDNA FLJ43172 fis, clone FCBBF3007242.
1 1385 Hs.655411 Similar to ribosomal protein L19.
1 1385 Hs.655293 Transcribed locus, strongly similar to XP_001133190.1 PREDICTED: similar to cytokine isoform 3 [Homo sapiens].
1 1385 Hs.655259 Mitochondrial ribosomal protein S5.
1 1385 Hs.655216 General transcription factor IIH, polypeptide 2, 44kDa.
1 1385 Hs.654475 Ribosomal protein S27.
1 1385 Hs.654471 Zinc finger protein 91.
1 1385 Hs.653904 Ribosomal protein L41.
1 1385 Hs.653287 Carbonic anhydrase VB, mitochondrial.
1 1385 Hs.652835 Transcribed locus.
1 1385 Hs.652324 EF-hand calcium binding domain 7.
1 1385 Hs.651219 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa.
1 1385 Hs.649877 Teashirt zinc finger homeobox 2.
1 1385 Hs.647421 GABA(A) receptor-associated protein.
1 1385 Hs.645304 Similar to QM protein.
1 1385 Hs.644563 Ubiquitin specific peptidase 8.
1 1385 Hs.643614 Transcribed locus, strongly similar to NP_598299.1 TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Rattus norvegicus].
1 1385 Hs.642817 Transmembrane emp24 protein transport domain containing 7.
1 1385 Hs.642178 Transcribed locus.
1 1385 Hs.636806 Similar to hCG1645499.
1 1385 Hs.635838 Transcribed locus.
1 1385 Hs.632707 Methionyl-tRNA synthetase.
1 1385 Hs.632282 Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5.
1 1385 Hs.631971 Mitochondrial ribosomal protein S36.
1 1385 Hs.631890 Vaccinia related kinase 2.
1 1385 Hs.61441 RNA binding motif protein 27.
1 1385 Hs.612629 Transcribed locus.
1 1385 Hs.612627 Transcribed locus.
1 1385 Hs.6126 Mannosidase, beta A, lysosomal-like.
1 1385 Hs.6076 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis).
1 1385 Hs.605712 Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6.
1 1385 Hs.600861 Chromosome 6 open reading frame 115.
1 1385 Hs.596014 Importin 9.
1 1385 Hs.595874 Transcribed locus.
1 1385 Hs.59504 Chromosome 9 open reading frame 126.
1 1385 Hs.593411 Peptidylprolyl isomerase (cyclophilin)-like 4.
1 1385 Hs.592727 Transcribed locus.
1 1385 Hs.592591 Zinc finger protein 148.
1 1385 Hs.592455 Transcribed locus, strongly similar to NP_001003447.1 hypothetical protein LOC445053 [Danio rerio].
1 1385 Hs.592313 Rho GTPase activating protein 5.
1 1385 Hs.591847 N-acetyltransferase 1 (arylamine N-acetyltransferase).
1 1385 Hs.591757 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2.
1 1385 Hs.591679 RAB33B, member RAS oncogene family.
1 1385 Hs.591340 Chromosome 6 open reading frame 225.

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Source: NCBI UniGene

EST Sequences

1,598 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • pituitary gland
  • head and neck tumor
  • adult
  • bulk

Source: NCBI Clone Registry



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