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UniSTS:66396 Links
WI-15057
Homo sapiens chromosome 19, locus GATAD2A
Macaca mulatta chromosome 19, locus LOC721223
Pan troglodytes chromosome 19, locus GATAD2A

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TCCCACCCCAAAAAACATC
Reverse primer:TTGTTTTTTTGTGCATAACTTGG
PCR product size:125 (bp), Homo sapiens
GenBank Accession:H22983

   Homo sapiens
Name: WI-15057
Also known as: EST283494
Polymorphism info:  

Cross References Help
Gene GeneID:54815
 Symbol:GATAD2A
 Description:GATA zinc finger domain containing 2A
 Position:19p13.11
UniGeneHs.118964 Transcribed locus, weakly similar to XP_996602.1 PREDICTED: similar to 60S a...
 Hs.696033 GATA zinc finger domain containing 2A

Mapping InformationHelp
WI-15057 Sequence Map: Chr 19|HuRef Map Viewer
  Position: 19180017-19180141 (bp)
 
WI-15057 Sequence Map: Chr 19 Map Viewer
  Position: 19478913-19479037 (bp)
 
WI-15057 Sequence Map: Chr 19|Celera Map Viewer
  Position: 19521973-19522097 (bp)
 
WI-15057 NCBI RH Map: Chr 19 Map Viewer
  Position: 177.1 (cR)
  Lod score: 1.55
 
WI-15057 Whitehead-RH Map: Chr 19 Map Viewer
  Position: 106.5 (cR3000)
  Lod score: P0.47
 
WI-15057 GeneMap99-GB4 Map: Chr 19 Map Viewer
  Position: 105.83 (cR3000)
  Lod score: 0.14
  Reference Interval: D19S899-D19S407

Electronic PCR results Help
RefSeq mRNA (1)
NM_017660.3 3844 .. 3968 (125 bp)  
 
mRNA (3)
AK000092.1 2285 .. 2409 (125 bp)  
AL390164.1 2063 .. 2187 (125 bp)  
AK225198.1 2285 .. 2409 (125 bp)  
 
Genomic (5 of 7)[Show All Hits]
AC011448.5 69203 .. 69327 (125 bp)  
CH003466.1 19687983 .. 19688107 (125 bp)  
CH003514.1 22154221 .. 22154345 (125 bp)  
CH471106.1 10738219 .. 10738343 (125 bp)  
CM000270.1 19521973 .. 19522097 (125 bp)  
 
ESTs (5 of 29)[Show All Hits]
H22983.1 32 .. 156 (125 bp)  
N23324.1 25 .. 149 (125 bp)  
N36885.1 24 .. 148 (125 bp)  
W03044.1 25 .. 149 (125 bp)  
AA074468.1 25 .. 149 (125 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01164058.1 34559 .. 34683 (125 bp)  
AADC01137929.1 104511 .. 104635 (125 bp)  
AADB02020096.1 781590 .. 781714 (125 bp)  
ABBA01051333.1 52702 .. 52826 (125 bp)  
 

   Macaca mulatta
Name: WI-15057
Polymorphism info:  

Cross References Help
Gene GeneID:721223
 Symbol:LOC721223
 Description:similar to GATA zinc finger domain containing 2A
 Position: 

Mapping InformationHelp
WI-15057 Sequence Map: Chr 19|NW_001107509.1 Map Viewer
  Position: 58762-58886 (bp)

   Pan troglodytes
Name: WI-15057
Polymorphism info:  

Cross References Help
Gene GeneID:455876
 Symbol:GATAD2A
 Description:GATA zinc finger domain containing 2A
 Position: 

Mapping InformationHelp
WI-15057 Sequence Map: Chr 19 Map Viewer
  Position: 20005260-20005385 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_512527.2 3900 .. 4025 (126 bp)  
 
Genomic (3)
CM000333.1 20005260 .. 20005385 (126 bp)  
AC190130.4 42665 .. 42790 (126 bp)  
AC195296.3 36135 .. 36260 (126 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01258187.1 21 .. 146 (126 bp)  
AACZ02183613.1 2676 .. 2801 (126 bp)  
 

 

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