BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_1739 PTS system, mannose-specific IIC component
(269 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269762.1| putative mannose-specific phosphotransfera... 524 e-147
ref|YP_280934.1| PTS system, mannose-specific IIC component... 523 e-147
ref|NP_665316.1| putative mannose-specific phosphotransfera... 522 e-147
ref|NP_687394.1| PTS system, mannose-specific IIC component... 432 e-119
ref|ZP_00791095.1| PTS system, mannose-specific IIC compone... 419 e-115
ref|ZP_00784251.1| PTS system, mannose-specific IIC compone... 403 e-111
ref|YP_138867.1| mannose PTS system component IIC [Streptoc... 366 e-100
ref|YP_001035844.1| Phosphotransferase system, mannose-spec... 357 6e-97
ref|NP_344821.1| PTS system, mannose-specific IIC component... 355 2e-96
ref|YP_001728711.1| Phosphotransferase system, mannose/fruc... 355 3e-96
dbj|BAC79247.1| mannose-specific phosphotransferase system ... 351 3e-95
gb|AAP05994.1| IICman [Streptococcus thermophilus] 351 4e-95
ref|YP_819868.1| mannose-specific PTS system component IIC ... 351 4e-95
ref|ZP_02919329.1| hypothetical protein STRINF_00164 [Strep... 343 8e-93
ref|YP_819227.1| mannose-specific PTS system component IIC ... 339 1e-91
ref|YP_001450957.1| phosphotransferase system enzyme II [St... 339 1e-91
ref|NP_722189.1| putative PTS system, mannose-specific comp... 336 8e-91
ref|YP_001199145.1| mannose-specific PTS IIC [Streptococcus... 336 1e-90
ref|YP_813572.1| mannose-specific PTS system component IIC ... 335 2e-90
ref|YP_619526.1| PTS system, mannose-specific enzyme IIC co... 333 6e-90
ref|YP_535548.1| PTS system, mannose-specific IIC component... 327 4e-88
gb|AAD46486.1|AF130465_2 mannose-specific phosphotransferas... 323 6e-87
ref|ZP_02420972.1| hypothetical protein ANACAC_03619 [Anaer... 315 2e-84
ref|ZP_02184141.1| hypothetical protein CAT7_05716 [Carnoba... 315 2e-84
ref|YP_193373.1| mannose-specific PTS system component IIC ... 314 3e-84
ref|YP_012725.1| PTS system, mannose/fructose/sorbose famil... 314 5e-84
ref|NP_463630.1| hypothetical protein lmo0097 [Listeria mon... 313 6e-84
ref|NP_469489.1| hypothetical protein lin0144 [Listeria inn... 313 8e-84
ref|YP_001576975.1| Mannose-specific PTS system component I... 312 2e-83
ref|NP_813832.1| PTS system, mannose-specific IIC component... 311 3e-83
ref|YP_810087.1| mannose-specific PTS system component IIC ... 310 9e-83
ref|ZP_00739614.1| PTS system, mannose-specific IIC compone... 310 1e-82
ref|ZP_02619155.1| IICman [Clostridium botulinum Bf] >gi|18... 306 7e-82
ref|YP_698130.1| PTS system, mannose/fructose/sorbose famil... 305 2e-81
ref|NP_965751.1| phosphoenolpyruvate-dependent sugar phosph... 304 3e-81
ref|YP_815622.1| mannose-specific PTS system component IIC ... 304 4e-81
ref|ZP_01696349.1| phosphotransferase system PTS, sorbose-s... 302 2e-80
ref|YP_001843208.1| PTS system mannose-specific IIC compone... 300 5e-80
ref|ZP_02437729.1| hypothetical protein CLOSS21_00164 [Clos... 296 8e-79
ref|ZP_01772256.1| Hypothetical protein COLAER_01260 [Colli... 296 1e-78
gb|AAW21986.1| mannose-specific PTS IIC [Streptococcus suis] 292 2e-77
ref|ZP_02950888.1| fructose permease iic component [Clostri... 290 6e-77
ref|YP_001032066.1| PTS system, mannose-specific IIC compon... 289 1e-76
ref|YP_001885572.1| PTS system sorbose-specific iic compone... 289 1e-76
ref|YP_395063.1| Mannose-specific phosphotransferase system... 288 3e-76
ref|YP_811464.1| mannose-specific PTS system component IIC ... 288 3e-76
ref|ZP_02613920.1| IICman [Clostridium botulinum NCTC 2916]... 287 4e-76
ref|NP_784349.1| mannose PTS, EIIC [Lactobacillus plantarum... 285 2e-75
ref|ZP_02866535.1| hypothetical protein CLOSPI_00335 [Clost... 284 4e-75
ref|NP_267863.1| mannose-specific PTS system component IIC ... 279 2e-73
ref|YP_804990.1| mannose-specific PTS system component IIC ... 277 6e-73
ref|ZP_02427140.1| hypothetical protein CLORAM_00517 [Clost... 266 1e-69
ref|YP_534991.1| PTS system, mannose-specific IIC component... 266 1e-69
ref|YP_807983.1| mannose-specific PTS system component IIC ... 264 6e-69
ref|YP_695270.1| PTS system, mannose/fructose/sorbose famil... 262 2e-68
ref|NP_561738.1| PTS system [Clostridium perfringens str. 1... 260 6e-68
ref|YP_001307852.1| phosphotransferase system PTS, sorbose-... 259 1e-67
ref|NP_149231.1| Mannose/fructose-specific phosphotransfera... 253 7e-66
ref|NP_694296.1| PTS system mannose-specific enzyme II C co... 246 2e-63
ref|ZP_00365567.1| COG3715: Phosphotransferase system, mann... 239 1e-61
ref|NP_873283.1| mannose-specific phosphotransferase system... 221 4e-56
ref|ZP_02438380.1| hypothetical protein CLOSS21_00831 [Clos... 211 4e-53
ref|ZP_02421084.1| hypothetical protein ANACAC_03738 [Anaer... 211 4e-53
ref|YP_455006.1| PTS system mannose-specific IIC component ... 211 5e-53
ref|YP_001452737.1| hypothetical protein CKO_01160 [Citroba... 207 5e-52
ref|YP_277955.1| PTS family enzyme IIC, mannose-specific [C... 207 9e-52
ref|YP_001335990.1| PTS enzyme IIC, mannose-specific [Klebs... 206 1e-51
ref|YP_001005152.1| sorbose-specific PTS uptake system comp... 206 1e-51
sp|P37082|PTRC_KLEPN Sorbose permease IIC component (PTS sy... 206 2e-51
ref|ZP_02872267.1| PTS system, mannose-specific IIC compone... 205 3e-51
ref|YP_405701.1| sorbose-permease PTS system IIC component ... 204 4e-51
ref|ZP_00365568.1| COG3715: Phosphotransferase system, mann... 204 4e-51
ref|ZP_02353381.1| hypothetical protein Sententeri_26422 [S... 204 5e-51
ref|NP_288254.1| PTS enzyme IIC, mannose-specific [Escheric... 204 5e-51
gb|AAF24133.1|AF129168_6 EIIC sorbose-PTS homlog [Lactobaci... 204 6e-51
ref|YP_001177107.1| PTS system, mannose/fructose/sorbose fa... 204 6e-51
ref|YP_001463119.1| PTS system, mannose-specific IIC compon... 204 6e-51
ref|ZP_02960839.1| PTS system, mannose-specific IIC compone... 204 6e-51
ref|YP_312931.1| putative sorbose-permease PTS system IIC c... 204 8e-51
ref|YP_001344240.1| PTS system, mannose/fructose/sorbose fa... 203 8e-51
ref|YP_001570157.1| hypothetical protein SARI_01109 [Salmon... 203 9e-51
ref|NP_290651.1| putative sorbose PTS component [Escherichi... 203 9e-51
ref|ZP_00825179.1| COG3715: Phosphotransferase system, mann... 203 9e-51
ref|YP_001479043.1| PTS system, mannose/fructose/sorbose fa... 203 1e-50
ref|YP_794735.1| mannose-specific PTS system component IIC ... 203 1e-50
ref|YP_001652411.1| PTS system, mannose-specific IIC compon... 203 1e-50
ref|ZP_00714620.1| COG3715: Phosphotransferase system, mann... 203 1e-50
ref|YP_150325.1| phosphotransferase enzyme II, C component ... 202 1e-50
ref|NP_456337.1| phosphotransferase enzyme II, C component ... 202 1e-50
ref|ZP_00923658.1| COG3715: Phosphotransferase system, mann... 202 1e-50
ref|YP_087809.1| hypothetical protein MS0617 [Mannheimia su... 202 2e-50
ref|ZP_02904524.1| PTS system, mannose-specific IIC compone... 202 2e-50
ref|YP_001054081.1| mannose permease IIC component [Actinob... 201 4e-50
ref|YP_001437528.1| hypothetical protein ESA_01434 [Enterob... 201 4e-50
ref|NP_929933.1| PTS system, mannose-specific IIC component... 201 5e-50
ref|ZP_00135517.2| COG3715: Phosphotransferase system, mann... 201 6e-50
ref|NP_464309.1| hypothetical protein lmo0782 [Listeria mon... 201 6e-50
ref|YP_001882704.1| sorbose-permease PTS system IIC compone... 200 9e-50
ref|YP_410307.1| putative sorbose-permease PTS system IIC c... 200 9e-50
ref|YP_691386.1| putative sorbose-permease PTS system IIC c... 200 1e-49
ref|ZP_00823099.1| COG3715: Phosphotransferase system, mann... 200 1e-49
ref|ZP_00835476.1| COG3715: Phosphotransferase system, mann... 200 1e-49
ref|NP_756835.1| PTS system, mannose-specific IIC component... 199 1e-49
ref|ZP_00827883.1| COG3715: Phosphotransferase system, mann... 199 2e-49
ref|YP_050481.1| PTS system, mannose-specific IIc component... 199 2e-49
ref|ZP_02687310.1| hypothetical protein LmonFSL_04034 [List... 199 2e-49
ref|YP_848942.1| mannose-specific phosphotransferasesystem ... 197 4e-49
ref|ZP_02284317.1| PTS system, mannose/fructose/sorbose fam... 197 5e-49
ref|NP_878732.1| phosphotransferase enzyme II, C component ... 197 7e-49
ref|NP_470117.1| hypothetical protein lin0775 [Listeria inn... 197 9e-49
ref|NP_405326.1| PTS system, mannose-specific IIC component... 196 9e-49
ref|NP_669856.1| PTS enzyme IIC, mannose-specific [Yersinia... 196 1e-48
ref|YP_013403.1| PTS system, mannose/fructose/sorbose famil... 196 2e-48
ref|YP_001338026.1| PTS enzyme IIC, mannose-specific [Klebs... 196 2e-48
ref|YP_089570.1| hypothetical protein MS2378 [Mannheimia su... 195 3e-48
ref|NP_838873.1| putative sorbose-permease PTS system IIC c... 194 5e-48
ref|YP_079971.1| phosphotransferase system (PTS) fructose-s... 193 8e-48
ref|YP_001652690.1| PTS system, mannose-specific IIC compon... 193 1e-47
ref|ZP_00724923.1| COG3715: Phosphotransferase system, mann... 193 1e-47
ref|ZP_00134534.1| COG3715: Phosphotransferase system, mann... 192 2e-47
ref|ZP_00835104.1| COG3715: Phosphotransferase system, mann... 192 3e-47
ref|YP_588891.1| PTS system, mannose/fructose/sorbose famil... 191 5e-47
ref|ZP_00831488.1| COG3715: Phosphotransferase system, mann... 191 7e-47
ref|YP_001343600.1| PTS system, mannose/fructose/sorbose fa... 190 1e-46
ref|YP_718820.1| protein-N(pi)-phosphohistidine-sugar phosp... 189 1e-46
gb|EDN74699.1| PTS family mannose porter component IIC [Man... 185 3e-45
ref|YP_001311974.1| PTS system, mannose/fructose/sorbose fa... 184 4e-45
ref|ZP_02478695.1| PtnC [Haemophilus parasuis 29755] >gi|16... 184 8e-45
gb|AAB04154.1| EIIC-man [Lactobacillus curvatus] 183 1e-44
ref|NP_245770.1| PtnC [Pasteurella multocida subsp. multoci... 182 2e-44
ref|YP_001310942.1| PTS system, mannose/fructose/sorbose fa... 179 1e-43
ref|YP_961836.1| PTS system, mannose/fructose/sorbose famil... 175 3e-42
ref|NP_390583.1| phosphotransferase system (PTS) fructose-s... 169 2e-40
ref|YP_001310002.1| PTS system mannose/fructose/sorbose fam... 156 1e-36
ref|ZP_02288400.1| hypothetical protein LmonocyFSL_00767 [L... 154 9e-36
ref|ZP_02339422.1| hypothetical protein Sentent_11256 [Salm... 151 4e-35
ref|ZP_02789240.1| PTS system, mannose-specific IIC compone... 149 1e-34
gb|ABK27639.1| putative PTS mannose/fructose-specific IIC c... 141 6e-32
ref|ZP_02904372.1| fructose permease iic component [Escheri... 137 1e-30
ref|ZP_00603137.1| Phosphotransferase system PTS, sorbose-s... 136 2e-30
ref|ZP_01772197.1| Hypothetical protein COLAER_01199 [Colli... 134 6e-30
ref|NP_814322.1| PTS system, IIC component [Enterococcus fa... 127 8e-28
ref|YP_001089584.1| PTS system, IIc component [Clostridium ... 125 2e-27
ref|NP_816643.1| PTS system, IIC component [Enterococcus fa... 122 2e-26
ref|ZP_00602999.1| PTS system, mannose-specific IIC compone... 119 3e-25
ref|ZP_02037957.1| hypothetical protein BACCAP_03576 [Bacte... 119 3e-25
ref|NP_459567.1| putative inner membrane protein [Salmonell... 118 3e-25
ref|ZP_02558636.1| hypothetical protein Sente_00370 [Salmon... 118 4e-25
ref|YP_001308105.1| phosphotransferase system PTS, sorbose-... 117 7e-25
ref|ZP_01696042.1| phosphotransferase system PTS, sorbose-s... 115 3e-24
ref|NP_346576.1| PTS system, IIC component [Streptococcus p... 115 4e-24
ref|ZP_00874428.1| Phosphotransferase system PTS, sorbose-s... 115 4e-24
ref|ZP_00604892.1| PTS system, mannose-specific IIC compone... 114 5e-24
ref|YP_001334230.1| putative inner membrane protein [Klebsi... 114 5e-24
ref|YP_001311623.1| phosphotransferase system PTS, sorbose-... 114 6e-24
ref|YP_075771.1| PTS system fructose/mannose-specific IIC c... 114 8e-24
ref|NP_814239.1| PTS system, IIC component [Enterococcus fa... 113 1e-23
ref|ZP_02327588.1| PTS system, N-acetylgalactosamine-specif... 112 3e-23
ref|YP_001087561.1| PTS system, IIc component [Clostridium ... 111 4e-23
ref|ZP_02726125.1| PTS system, IIc component [Clostridium d... 111 4e-23
ref|YP_697321.1| PTS system, IIC component [Clostridium per... 111 4e-23
ref|ZP_00604332.1| Phosphotransferase system PTS, sorbose-s... 111 5e-23
ref|NP_563547.1| probable PTS system [Clostridium perfringe... 111 5e-23
ref|NP_964592.1| phosphoenolpyruvate-dependent sugar phosph... 111 6e-23
ref|YP_177564.1| PTS system, mannose-specific enzyme II, C ... 110 7e-23
ref|YP_814351.1| Phosphotransferase system, mannose/fructos... 110 1e-22
ref|YP_075107.1| PTS system mannose-specific IID component ... 109 2e-22
ref|ZP_01966846.1| hypothetical protein RUMTOR_00387 [Rumin... 109 2e-22
ref|YP_001308097.1| phosphotransferase system PTS, sorbose-... 109 2e-22
ref|YP_075077.1| PTS system N-acetylgalactosamine-specific ... 108 3e-22
ref|NP_561238.1| probable PTS system [Clostridium perfringe... 108 4e-22
ref|YP_001456609.1| hypothetical protein CKO_05130 [Citroba... 108 5e-22
ref|NP_463556.1| hypothetical protein lmo0023 [Listeria mon... 107 7e-22
ref|NP_458164.1| putative PTS system protein [Salmonella en... 107 9e-22
ref|ZP_01772939.1| Hypothetical protein COLAER_01965 [Colli... 107 9e-22
ref|ZP_02078239.1| hypothetical protein EUBDOL_02059 [Eubac... 107 1e-21
ref|ZP_01942160.1| hypothetical protein LMRG_02452 [Listeri... 107 1e-21
ref|NP_469369.1| hypothetical protein lin0022 [Listeria inn... 107 1e-21
ref|ZP_01927932.1| PTS system, IIC component [Listeria mono... 107 1e-21
ref|YP_803742.1| mannose-specific PTS system component IIC ... 107 1e-21
ref|YP_001310008.1| N-acetylgalactosamine-specific PTS syst... 107 1e-21
ref|ZP_02950750.1| PTS system, IIc component [Clostridium b... 106 1e-21
ref|ZP_02287590.1| PTS system, IIC component [Listeria mono... 106 1e-21
ref|ZP_00603299.1| Phosphotransferase system PTS, sorbose-s... 106 2e-21
ref|ZP_02285785.1| PTS system, mannose-specific, IIC compon... 106 2e-21
ref|ZP_02666899.1| hypothetical protein Senterienterica_100... 106 2e-21
ref|ZP_02862951.1| hypothetical protein ANASTE_02178 [Anaer... 105 2e-21
ref|NP_815632.1| PTS system, IIC component [Enterococcus fa... 105 3e-21
ref|ZP_00602811.1| Phosphotransferase system PTS, sorbose-s... 105 3e-21
ref|ZP_02426829.1| hypothetical protein CLORAM_00206 [Clost... 105 3e-21
ref|ZP_01967021.1| hypothetical protein RUMTOR_00563 [Rumin... 105 3e-21
ref|YP_001338417.1| putative PTS permease [Klebsiella pneum... 105 4e-21
ref|ZP_02866386.1| hypothetical protein CLOSPI_00166 [Clost... 104 5e-21
ref|ZP_00604663.1| Phosphotransferase system PTS, sorbose-s... 104 7e-21
ref|ZP_02328531.1| PTS system, IIC component [Paenibacillus... 104 8e-21
ref|ZP_00712467.1| COG3715: Phosphotransferase system, mann... 103 8e-21
ref|YP_848229.1| PTS system, mannose/fructose/sorbose famil... 103 9e-21
ref|YP_131817.1| putative permease protein [Photobacterium ... 103 1e-20
ref|YP_536600.1| PTS system, mannose-specific IIC component... 103 1e-20
ref|YP_245827.1| PTS system, IIC component [Bacillus cereus... 103 2e-20
ref|YP_001572025.1| hypothetical protein SARI_03042 [Salmon... 103 2e-20
ref|ZP_02076878.1| hypothetical protein EUBDOL_00671 [Eubac... 102 2e-20
ref|ZP_02073681.1| hypothetical protein CLOL250_00423 [Clos... 102 3e-20
ref|ZP_02681348.1| hypothetical protein Sentericaenterica_2... 102 3e-20
ref|NP_471443.1| hypothetical protein lin2109 [Listeria inn... 101 4e-20
ref|YP_850218.1| PTS system, mannose-specific IIC component... 101 4e-20
ref|NP_603527.1| PTS system, IIC component [Fusobacterium n... 101 5e-20
ref|ZP_02684385.1| hypothetical protein Salmentericaenteric... 101 6e-20
ref|YP_001591810.1| hypothetical protein SPAB_05709 [Salmon... 101 6e-20
ref|YP_805667.1| Mannose-specific PTS system component IICD... 100 7e-20
ref|YP_803726.1| mannose-specific PTS system component IIC ... 100 8e-20
ref|YP_219376.1| putative PTS permease [Salmonella enterica... 100 9e-20
ref|ZP_01944424.1| PTS system, IIC component [Listeria mono... 100 1e-19
ref|NP_463396.1| putative PTS permease [Salmonella typhimur... 100 1e-19
ref|ZP_02351573.1| hypothetical protein Sententeri_17205 [S... 100 1e-19
ref|YP_014617.1| PTS system, IIC component [Listeria monocy... 100 1e-19
ref|ZP_02235526.1| hypothetical protein DORFOR_02412 [Dorea... 100 1e-19
ref|NP_465525.1| hypothetical protein lmo2001 [Listeria mon... 100 2e-19
ref|YP_001570206.1| hypothetical protein SARI_01159 [Salmon... 99 2e-19
ref|ZP_02135139.1| PTS system, N-acetylgalactosamine-specif... 99 3e-19
ref|YP_206960.1| PTS system, N-acetylgalactosamine-specific... 99 4e-19
ref|NP_816595.1| PTS system, IIC component [Enterococcus fa... 99 4e-19
ref|YP_001178283.1| phosphotransferase system PTS, sorbose-... 99 4e-19
ref|ZP_02420819.1| hypothetical protein ANACAC_03466 [Anaer... 98 5e-19
ref|YP_001086757.1| PTS system, IIc component [Clostridium ... 98 7e-19
ref|NP_814559.1| PTS system, IIC component [Enterococcus fa... 98 7e-19
ref|ZP_02278633.1| hypothetical protein LmonF_00285 [Lister... 98 7e-19
ref|YP_001178289.1| N-acetylgalactosamine-specific PTS syst... 98 7e-19
ref|ZP_00827938.1| COG3715: Phosphotransferase system, mann... 98 7e-19
ref|ZP_00602508.1| Phosphotransferase system PTS, sorbose-s... 98 7e-19
gb|AAT01094.1| phosphotransferase enzyme II C component [Sa... 97 8e-19
ref|ZP_02949885.1| N-acetylgalactosamine permease iic compo... 97 1e-18
ref|NP_786053.1| N-acetylgalactosamine PTS, EIIC [Lactobaci... 97 2e-18
ref|ZP_01217448.1| putative N-acetylgalactosamine-specific ... 96 2e-18
ref|YP_805221.1| Phosphotransferase system, mannose/fructos... 96 3e-18
ref|YP_805700.1| Phosphotransferase system, mannose/fructos... 96 3e-18
ref|NP_815501.1| PTS system, IIC component [Enterococcus fa... 96 4e-18
ref|ZP_02042024.1| hypothetical protein RUMGNA_02800 [Rumin... 95 4e-18
ref|NP_312039.1| N-acetylgalactosamine-specific PTS system ... 95 4e-18
ref|YP_001089793.1| PTS system, IIc component [Clostridium ... 95 5e-18
ref|ZP_01802803.1| hypothetical protein CdifQ_04003808 [Clo... 95 5e-18
ref|YP_542932.1| putative phosphotransferase system protein... 95 5e-18
gb|EDN73080.1| PTS family mannose porter component IIC [Man... 95 5e-18
ref|YP_920502.1| PTS system mannose/fructose/sorbose family... 95 6e-18
ref|ZP_02900888.1| PTS system, N-acetylgalactosamine-specif... 95 6e-18
ref|NP_816655.1| PTS system, IIC component [Enterococcus fa... 95 6e-18
ref|NP_755756.1| Putative phosphotransferase system enzyme ... 95 6e-18
ref|YP_456105.1| putative PTS system IIC component [Sodalis... 95 6e-18
ref|YP_001456022.1| hypothetical protein CKO_04532 [Citroba... 94 7e-18
ref|ZP_00723252.1| COG3715: Phosphotransferase system, mann... 94 8e-18
ref|NP_404456.1| putative PTS permease protein [Yersinia pe... 94 8e-18
ref|YP_001887318.1| PTS system sorbose-specific iic compone... 94 1e-17
ref|ZP_02901300.1| PTS system, IIc component [Escherichia a... 94 1e-17
ref|ZP_00831925.1| COG3715: Phosphotransferase system, mann... 93 1e-17
ref|ZP_01697053.1| phosphotransferase system PTS, sorbose-s... 93 2e-17
ref|ZP_01158545.1| putative N-acetylgalactosamine-specific ... 93 2e-17
ref|ZP_01234297.1| phosphotransferase system, mannose/fruct... 93 2e-17
ref|YP_807934.1| Phosphotransferase system, mannose/fructos... 93 2e-17
ref|ZP_01063133.1| putative N-acetylgalactosamine-specific ... 93 2e-17
ref|YP_132711.1| putative N-acetylgalactosamine-specific II... 93 2e-17
ref|ZP_02288984.1| hypothetical protein LmonocyFSL_05848 [L... 92 3e-17
ref|YP_001607716.1| PTS system, N-acetylgalactosamine-speci... 92 5e-17
ref|ZP_02335700.1| PTS family enzyme IIC, mannose-specific ... 92 5e-17
ref|NP_708931.1| N-acetylgalactosameine-specific IIC compon... 92 5e-17
ref|ZP_02420510.1| hypothetical protein ANACAC_03127 [Anaer... 92 5e-17
ref|YP_855352.1| N-acetylgalactosamine permease IIC compone... 92 5e-17
ref|NP_720577.1| putative sorbose PTS system, IIC component... 91 6e-17
ref|NP_928179.1| PTS system, N-acetylgalactosamine-specific... 91 1e-16
ref|YP_001693020.1| PTS mannose/fructose/N-acetylgalactosam... 90 1e-16
ref|ZP_00724730.1| COG3715: Phosphotransferase system, mann... 90 2e-16
ref|ZP_02900560.1| PTS system, N-acetylgalactosamine-specif... 89 2e-16
gb|AAR89079.2| EsuC [Lactobacillus casei] 89 3e-16
ref|YP_542547.1| N-acetylgalactosamine-specific PTS system ... 89 3e-16
ref|ZP_00833747.1| COG3715: Phosphotransferase system, mann... 88 5e-16
gb|AAF81091.1|AF228498_11 AgaC [Escherichia coli] 88 7e-16
ref|ZP_02419826.1| hypothetical protein ANACAC_02420 [Anaer... 88 8e-16
ref|ZP_01217035.1| PTS system, N-acetylgalactosamine-specif... 87 9e-16
ref|NP_933331.1| phosphotransferase system, mannose/fructos... 87 9e-16
ref|NP_964136.1| phosphoenolpyruvate-dependent sugar phosph... 87 1e-15
ref|NP_755763.1| N-acetylgalactosamine-specific PTS system ... 87 1e-15
ref|YP_001480070.1| phosphotransferase system PTS sorbose-s... 87 1e-15
ref|YP_813968.1| Phosphotransferase system, mannose/fructos... 86 2e-15
ref|NP_417608.1| N-acetylgalactosamine-specific enzyme IIC ... 86 2e-15
gb|AAF81084.1|AF228498_4 AgaW [Escherichia coli] 86 3e-15
ref|ZP_02088267.1| hypothetical protein CLOBOL_05819 [Clost... 86 3e-15
ref|ZP_02418785.1| hypothetical protein ANACAC_01369 [Anaer... 86 3e-15
ref|ZP_02419622.1| hypothetical protein ANACAC_02216 [Anaer... 85 5e-15
ref|ZP_02184434.1| PTS system, IIC component [Carnobacteriu... 85 5e-15
ref|NP_762939.1| Phosphotransferase system, mannose/fructos... 85 5e-15
ref|NP_708937.1| N-acetylgalactosamine-specific PTS system ... 85 6e-15
ref|ZP_02958573.1| PTS system, N-acetylgalactosamine-specif... 85 6e-15
ref|NP_965627.1| phosphoenolpyruvate-dependent sugar phosph... 85 6e-15
ref|NP_937569.1| phosphotransferase system, mannose/fructos... 84 7e-15
ref|ZP_00711203.1| COG3715: Phosphotransferase system, mann... 84 8e-15
ref|ZP_02420785.1| hypothetical protein ANACAC_03432 [Anaer... 84 9e-15
ref|ZP_02076476.1| hypothetical protein EUBDOL_00265 [Eubac... 84 1e-14
gb|AAC44680.1| PTS permease for mannose subunit IIPMan [Vib... 84 1e-14
ref|ZP_02040199.1| hypothetical protein RUMGNA_00963 [Rumin... 83 2e-14
ref|ZP_02087556.1| hypothetical protein CLOBOL_05100 [Clost... 82 3e-14
ref|ZP_02078461.1| hypothetical protein EUBDOL_02281 [Eubac... 82 5e-14
ref|NP_816814.1| PTS system, IIC component [Enterococcus fa... 81 7e-14
ref|ZP_02420306.1| hypothetical protein ANACAC_02923 [Anaer... 81 8e-14
ref|ZP_02077691.1| hypothetical protein EUBDOL_01488 [Eubac... 80 1e-13
ref|ZP_02439915.1| hypothetical protein CLOSS21_02399 [Clos... 80 1e-13
ref|ZP_01695977.1| phosphotransferase system PTS, sorbose-s... 79 2e-13
ref|YP_001034071.1| PTS system, IIC component, putative [St... 79 2e-13
ref|ZP_02420314.1| hypothetical protein ANACAC_02931 [Anaer... 79 3e-13
ref|ZP_02283005.1| hypothetical protein LmonL_17980 [Lister... 79 4e-13
ref|NP_289705.1| putative phosphotransferase system enzyme ... 79 4e-13
ref|YP_001834780.1| PTS system, IIC component [Streptococcu... 77 1e-12
ref|ZP_01409093.1| hypothetical protein SpneT_02000436 [Str... 77 1e-12
ref|ZP_01836083.1| PTS system, IIC component [Streptococcus... 77 2e-12
ref|NP_344611.1| PTS system, IIC component [Streptococcus p... 76 2e-12
ref|NP_357655.1| Phosphotransferase system sugar-specific E... 76 2e-12
ref|ZP_02418112.1| hypothetical protein ANACAC_00680 [Anaer... 76 2e-12
ref|ZP_01819254.1| PTS system, IIC component [Streptococcus... 76 2e-12
ref|ZP_01826829.1| PTS system, IIC component [Streptococcus... 76 2e-12
ref|ZP_02420773.1| hypothetical protein ANACAC_03420 [Anaer... 76 2e-12
ref|ZP_02040771.1| hypothetical protein RUMGNA_01535 [Rumin... 76 3e-12
ref|ZP_01818609.1| PTS system, IIC component [Streptococcus... 76 3e-12
ref|ZP_02078224.1| hypothetical protein EUBDOL_02044 [Eubac... 75 4e-12
ref|ZP_02949974.1| PTS system, IIC component [Clostridium b... 75 4e-12
ref|ZP_01544978.1| PTS system, IIC component [Oenococcus oe... 75 5e-12
ref|ZP_02288330.1| PTS system, mannose-specific, IIC compon... 75 5e-12
ref|ZP_02076934.1| hypothetical protein EUBDOL_00727 [Eubac... 75 6e-12
ref|YP_810011.1| Phosphotransferase system, mannose/fructos... 75 6e-12
ref|YP_807827.1| N-acetylgalactosamine PTS, EIIC [Lactobaci... 74 8e-12
ref|ZP_00603181.1| Phosphotransferase system PTS, sorbose-s... 74 8e-12
ref|ZP_01772878.1| Hypothetical protein COLAER_01898 [Colli... 74 9e-12
ref|ZP_02418842.1| hypothetical protein ANACAC_01426 [Anaer... 74 1e-11
ref|ZP_02288399.1| hypothetical protein LmonocyFSL_00762 [L... 73 2e-11
ref|NP_815928.1| PTS system, IIC component [Enterococcus fa... 72 4e-11
ref|NP_688937.1| PTS system, IIC component [Streptococcus a... 72 5e-11
gb|ABK27643.1| putative PTS mannose/fructose-specific IIC c... 71 7e-11
ref|YP_001449367.1| PTS system, IIC component [Streptococcu... 71 8e-11
ref|NP_562380.1| probable PTS system [Clostridium perfringe... 70 1e-10
ref|ZP_02952522.1| PTS system, IIC component [Clostridium p... 70 1e-10
ref|ZP_02419933.1| hypothetical protein ANACAC_02528 [Anaer... 70 1e-10
ref|NP_607167.1| putative phosphotransferase system (PTS), ... 70 2e-10
ref|ZP_02642474.1| PTS system, IIC component [Clostridium p... 70 2e-10
ref|YP_001197817.1| Phosphotransferase system, mannose/fruc... 70 2e-10
ref|ZP_00875458.1| Phosphotransferase system PTS, sorbose-s... 70 2e-10
ref|YP_602427.1| PTS system, mannose/fructose family IIC co... 70 2e-10
ref|NP_269225.1| putative phospotransferase system (PTS), e... 70 2e-10
ref|NP_802206.1| putative phosphotransferase system (PTS), ... 70 2e-10
ref|YP_001128541.1| sugar phosphotransferase system (PTS),m... 69 2e-10
ref|YP_536837.1| PTS system, mannose-specific IIC component... 69 3e-10
ref|YP_001887544.1| PTS system, IIc component [Clostridium ... 68 8e-10
ref|ZP_02440304.1| hypothetical protein CLOSS21_02807 [Clos... 67 1e-09
ref|ZP_02420402.1| hypothetical protein ANACAC_03019 [Anaer... 66 2e-09
ref|YP_803721.1| N-acetylgalactosamine PTS, EIIC [Pediococc... 66 3e-09
ref|ZP_02438784.1| hypothetical protein CLOSS21_01237 [Clos... 64 9e-09
ref|YP_001086967.1| PTS system, IIc component [Clostridium ... 64 1e-08
ref|ZP_02746212.1| PTS system, IIc component [Clostridium d... 64 1e-08
ref|ZP_02309664.1| PTS system, IIC component [Listeria mono... 64 1e-08
ref|ZP_02478968.1| PTS system, IIC component [Haemophilus p... 63 2e-08
ref|ZP_01804928.1| hypothetical protein CdifQ_04000529 [Clo... 63 2e-08
ref|ZP_02862941.1| hypothetical protein ANASTE_02168 [Anaer... 63 2e-08
gb|AAZ67629.1| phosphotransferase system IIC component puta... 62 3e-08
ref|YP_694859.1| PTS system, mannose/fructose/sorbose famil... 62 6e-08
ref|ZP_00735776.1| COG3715: Phosphotransferase system, mann... 61 8e-08
ref|YP_697727.1| PTS system sorbose-specific iic component ... 60 2e-07
ref|ZP_02076891.1| hypothetical protein EUBDOL_00684 [Eubac... 59 3e-07
ref|ZP_02026673.1| hypothetical protein EUBVEN_01936 [Eubac... 59 3e-07
ref|YP_001835047.1| PTS system, IIC component [Streptococcu... 59 3e-07
ref|ZP_02290048.1| hypothetical protein LmonocyFSL_15108 [L... 59 4e-07
ref|ZP_02644787.1| Mannose-specific PTS system component II... 59 5e-07
ref|NP_289712.1| N-acetylgalactosamine-specific PTS system ... 58 8e-07
ref|YP_001198584.1| Phosphotransferase system, mannose/fruc... 58 9e-07
ref|ZP_01773303.1| Hypothetical protein COLAER_02341 [Colli... 57 1e-06
ref|ZP_02740991.1| PTS system, N-acetylgalactosamine-specif... 57 1e-06
ref|ZP_02088866.1| hypothetical protein CLOBOL_06432 [Clost... 57 2e-06
ref|NP_344860.1| PTS system, IIC component [Streptococcus p... 56 2e-06
sp|P42905.1|PTPC2_ECOLI N-acetylgalactosamine permease IIC ... 56 2e-06
ref|ZP_02420065.1| hypothetical protein ANACAC_02668 [Anaer... 56 3e-06
ref|NP_664547.1| putative phospotransferase system enzyme I... 55 4e-06
ref|ZP_02419386.1| hypothetical protein ANACAC_01973 [Anaer... 55 5e-06
ref|YP_001034232.1| PTS system, mannose-specific IIC compon... 55 5e-06
ref|ZP_02420981.1| hypothetical protein ANACAC_03628 [Anaer... 54 1e-05
ref|YP_602033.1| PTS system, N-acetylgalactosamine-specific... 52 4e-05
ref|ZP_01543691.1| phospotransferase system PTS, IIC compon... 52 4e-05
ref|NP_268877.1| putative PTS dependent N-acetyl-galactosam... 52 5e-05
ref|YP_856863.1| PTS system, fructose(mannose)-specific IIC... 51 7e-05
ref|ZP_01220286.1| PTS system, fructose(mannose)-specific I... 51 7e-05
gb|AAA24111.1| manY (pel) gene product >gi|226169|prf||1413... 51 8e-05
ref|YP_598124.1| PTS system, N-acetylgalactosamine-specific... 50 1e-04
ref|ZP_02874509.1| PTS system, mannose-specific IIC compone... 50 1e-04
ref|YP_596243.1| PTS system, N-acetylgalactosamine-specific... 50 1e-04
ref|NP_664248.1| putative PTS dependent N-acetyl-galactosam... 50 1e-04
ref|ZP_00365914.1| COG3715: Phosphotransferase system, mann... 50 2e-04
ref|YP_001480501.1| phosphotransferase system PTS sorbose-s... 49 3e-04
ref|YP_279968.1| PTS system, N-acetylgalactosamine-specific... 49 3e-04
ref|YP_059859.1| PTS system, N-acetylgalactosamine-specific... 49 4e-04
ref|NP_606867.1| putative PTS dependent N-acetyl-galactosam... 49 4e-04
ref|ZP_00787892.1| PTS system, IIC component [Streptococcus... 49 4e-04
ref|ZP_00876013.1| phosphotransferase system sugar-specific... 49 4e-04
ref|NP_688888.1| PTS system, IIC component [Streptococcus a... 49 5e-04
gb|ABI36806.1| putative phosphotransferase system PTS sorbo... 48 7e-04
ref|ZP_01865582.1| PTS system, fructose(mannose)-specific I... 47 0.001
ref|ZP_02866561.1| hypothetical protein CLOSPI_00361 [Clost... 45 0.004
ref|YP_001728011.1| Phosphotransferase system, mannose/fruc... 45 0.004
emb|CAF33350.1| levC protein [Lactobacillus casei] >gi|8886... 45 0.004
ref|YP_805851.1| Phosphotransferase system, mannose/fructos... 45 0.007
ref|YP_357343.1| predicted PTS family phosphotransferase, m... 44 0.010
ref|YP_001309318.1| phosphotransferase system PTS, sorbose-... 44 0.011
ref|ZP_02427668.1| hypothetical protein CLORAM_01055 [Clost... 43 0.023
ref|NP_348087.1| PTS system, fructose(mannose)-specific IIC... 42 0.043
ref|NP_816747.1| PTS system, IIC component [Enterococcus fa... 42 0.046
ref|YP_001451157.1| PTS system, IIC component [Streptococcu... 42 0.046
ref|NP_722259.1| putative PTS system, mannose-specific IIC ... 42 0.061
gb|EAZ02392.1| hypothetical protein OsI_023624 [Oryza sativ... 41 0.075
ref|ZP_02438774.1| hypothetical protein CLOSS21_01227 [Clos... 40 0.20
ref|NP_815527.1| PTS system, IIC component [Enterococcus fa... 40 0.25
ref|ZP_00602759.1| Phosphotransferase system PTS, sorbose-s... 39 0.27
ref|YP_038891.1| L-seryl-tRNA(Sec) selenium transferase; se... 38 0.61
ref|NP_981295.1| pyridoxal phosphate-dependent enzyme, puta... 38 0.62
ref|ZP_02592453.1| pyridoxal phosphate-dependent enzyme, pu... 38 0.65
ref|NP_834545.1| L-seryl-tRNA(Sec) selenium transferase [Ba... 38 0.65
ref|ZP_02580828.1| selenocysteine synthase [Bacillus cereus... 38 0.71
ref|ZP_02522294.1| selenocysteine synthase [Bacillus cereus... 38 0.79
ref|ZP_02255623.1| selenocysteine synthase [Bacillus cereus... 38 0.85
ref|YP_086173.1| L-seryl-tRNA(Sec) selenium transferase; se... 38 0.88
ref|YP_001647469.1| pyridoxal phosphate-dependent enzyme, p... 38 0.88
ref|ZP_02263388.1| L-seryl-tRNA(Sec) selenium transferase; ... 38 0.90
ref|ZP_00238728.1| pyridoxal phosphate-dependent enzyme, pu... 38 0.90
ref|YP_897117.1| selenocysteine synthase [Bacillus thuringi... 37 0.97
ref|ZP_02597660.1| selenocysteine synthase [Bacillus cereus... 37 0.98
ref|NP_847286.1| pyridoxal phosphate-dependent enzyme, puta... 37 0.98
ref|ZP_02539575.1| pyridoxal phosphate-dependent enzyme, pu... 37 0.99
ref|NP_621891.1| mannose-specific PTS enzyme IID [Thermoana... 37 1.0
ref|YP_818741.1| Phosphotransferase system, mannose/fructos... 37 1.2
ref|ZP_02586834.1| selenocysteine synthase [Bacillus cereus... 37 1.8
ref|ZP_00742630.1| L-seryl-tRNA selenium transferase family... 37 1.8
ref|ZP_02309665.1| PTS system, IIC component [Listeria mono... 36 3.0
ref|ZP_01445178.1| mechanosensitive ion channel family prot... 35 5.2
ref|ZP_01311463.1| phosphotransferase system mannose/fructo... 35 5.2
ref|ZP_02185891.1| PTS system, IIC component [Carnobacteriu... 34 8.1
ref|NP_793085.1| AcrB/AcrD/AcrF family protein [Pseudomonas... 34 9.3
ref|NP_965461.1| phosphoenolpyruvate-dependent sugar phosph... 34 9.3
>ref|NP_269762.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes M1 GAS]
ref|NP_607832.1| putative mannose-specific phosphotransferase system component II
[Streptococcus pyogenes MGAS8232]
ref|YP_060792.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10394]
ref|YP_282843.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS5005]
ref|YP_597213.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS9429]
ref|YP_599156.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10270]
ref|YP_601103.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS2096]
ref|YP_603033.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10750]
ref|YP_001127955.1| putative mannose-specific phosphotransferase system (PTS), IIC
component [Streptococcus pyogenes str. Manfredo]
gb|AAK34483.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes M1 GAS]
gb|AAL98331.1| putative mannose-specific phosphotransferase system component II
[Streptococcus pyogenes MGAS8232]
gb|AAT87609.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10394]
gb|AAZ52098.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS5005]
gb|ABF32669.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS9429]
gb|ABF34612.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10270]
gb|ABF36559.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS2096]
gb|ABF38489.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS10750]
emb|CAM29707.1| putative mannose-specific phosphotransferase system (PTS), IIC
component [Streptococcus pyogenes str. Manfredo]
Length = 269
Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML
Sbjct: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT
Sbjct: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN
Sbjct: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF
Sbjct: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
IYLNLSKKGGNGGNAAGSADPIGDILEDY
Sbjct: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
>ref|YP_280934.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS6180]
gb|AAX72579.1| PTS system, mannose-specific IIC component [Streptococcus pyogenes
MGAS6180]
Length = 269
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/269 (99%), Positives = 268/269 (99%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML
Sbjct: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT
Sbjct: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
LSTALVHAGDKAA EGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN
Sbjct: 121 LSTALVHAGDKAATEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF
Sbjct: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
IYLNLSKKGGNGGNAAGSADPIGDILEDY
Sbjct: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
>ref|NP_665316.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes MGAS315]
ref|NP_801617.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes SSI-1]
gb|AAM80119.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes MGAS315]
dbj|BAC63450.1| putative mannose-specific phosphotransferase system component IIC
[Streptococcus pyogenes SSI-1]
Length = 269
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/269 (99%), Positives = 269/269 (100%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML
Sbjct: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
ALGWANIGAAVAPDAALASVAAAIIMVKSG+FTQKGITFAYSTAIPLAVAGLFLTMIVRT
Sbjct: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGNFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN
Sbjct: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF
Sbjct: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
IYLNLSKKGGNGGNAAGSADPIGDILEDY
Sbjct: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
>ref|NP_687394.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae 2603V/R]
ref|NP_734816.1| hypothetical protein gbs0347 [Streptococcus agalactiae NEM316]
ref|YP_329081.1| PTS system, IIC component, mannose/fructose/sorbose family
[Streptococcus agalactiae A909]
ref|ZP_00781195.1| mannose-specific phosphotransferase system component IIC
[Streptococcus agalactiae 18RS21]
ref|ZP_00785925.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae COH1]
ref|ZP_00787836.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae CJB111]
gb|AAM99266.1|AE014208_6 PTS system, mannose-specific IIC component [Streptococcus
agalactiae 2603V/R]
emb|CAD45992.1| Unknown [Streptococcus agalactiae NEM316]
gb|ABA45300.1| PTS system, IIC component, mannose/fructose/sorbose family
[Streptococcus agalactiae A909]
gb|EAO62207.1| mannose-specific phosphotransferase system component IIC
[Streptococcus agalactiae 18RS21]
gb|EAO73460.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae CJB111]
gb|EAO75319.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae COH1]
Length = 270
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/270 (85%), Positives = 256/270 (94%), Gaps = 1/270 (0%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M+DISIIS ILVVI+AFFAGLEGILDQFQ+HQPLVACTLIGLVTGHLEAG+ILGG+LQM+
Sbjct: 1 MADISIISMILVVIVAFFAGLEGILDQFQIHQPLVACTLIGLVTGHLEAGIILGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
AL WANIGAAVAPDAALASVAAAII+VKSGDFTQKGI FA+STA+PLA+AGLFLTMIVRT
Sbjct: 61 ALAWANIGAAVAPDAALASVAAAIILVKSGDFTQKGINFAFSTAVPLAIAGLFLTMIVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+STALVHAGDKAA+EGNFA IERFHFIALLLQGLRIA PAALL+A+P+S+VQS+L AMP+
Sbjct: 121 ISTALVHAGDKAASEGNFAAIERFHFIALLLQGLRIAFPAALLLAIPSSSVQSILEAMPD 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLN GMQ+GGAMVVAVGYAMVINMMATREVWPFFALGFALAA++QLTLIAMG IGVAIA
Sbjct: 181 WLNGGMQVGGAMVVAVGYAMVINMMATREVWPFFALGFALAALNQLTLIAMGTIGVAIAL 240
Query: 241 IYLNLSKKGGNGGNA-AGSADPIGDILEDY 269
IY++LSK GG+ G + AGS DPIGDILEDY
Sbjct: 241 IYISLSKMGGSKGTSNAGSNDPIGDILEDY 270
>ref|ZP_00791095.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae 515]
gb|EAO70164.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae 515]
Length = 262
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/261 (85%), Positives = 248/261 (95%), Gaps = 1/261 (0%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
ILVVI+AFFAGLEGILDQFQ+HQPLVACTLIGLVTGHLEAG+ILGG+LQM+AL WANIGA
Sbjct: 2 ILVVIVAFFAGLEGILDQFQIHQPLVACTLIGLVTGHLEAGIILGGSLQMVALAWANIGA 61
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
AVAPDAALASVAAAII+VKSGDFTQKGI FA+STA+PLA+AGLFLTMIVRT+STALVHAG
Sbjct: 62 AVAPDAALASVAAAIILVKSGDFTQKGINFAFSTAVPLAIAGLFLTMIVRTISTALVHAG 121
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
DKAA+EGNFA IERFHFIALLLQGLRIA PAALL+A+P+S+VQS+L AMP+WLN GMQ+G
Sbjct: 122 DKAASEGNFAAIERFHFIALLLQGLRIAFPAALLLAIPSSSVQSILEAMPDWLNGGMQVG 181
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
GAMVVAVGYAMVINMMATREVWPFFALGFALAA++QLTLIAMG IGVAIA IY++LSK G
Sbjct: 182 GAMVVAVGYAMVINMMATREVWPFFALGFALAALNQLTLIAMGTIGVAIALIYISLSKMG 241
Query: 250 GNGGNA-AGSADPIGDILEDY 269
G+ G + AGS DPIGDILEDY
Sbjct: 242 GSKGTSNAGSNDPIGDILEDY 262
>ref|ZP_00784251.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae H36B]
gb|EAO77009.1| PTS system, mannose-specific IIC component [Streptococcus
agalactiae H36B]
Length = 266
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/253 (84%), Positives = 239/253 (94%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M+DISIIS ILVVI+AFFAGLEGILDQFQ+HQPLVACTLIGLVTGHLEAG+ILGG+LQM+
Sbjct: 14 MADISIISMILVVIVAFFAGLEGILDQFQIHQPLVACTLIGLVTGHLEAGIILGGSLQMI 73
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
AL WANIGAAVAPDAALASVAAAII+VKSGDFTQKGI FA+STA+PLA+AGLFLTMIVRT
Sbjct: 74 ALAWANIGAAVAPDAALASVAAAIILVKSGDFTQKGINFAFSTAVPLAIAGLFLTMIVRT 133
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+STALVHAGDKAA+EGNFA IERFHFIALLLQGLRIA PAALL+A+P+S+VQS+L AMP+
Sbjct: 134 ISTALVHAGDKAASEGNFAAIERFHFIALLLQGLRIAFPAALLLAIPSSSVQSILEAMPD 193
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLN GMQ+GGAMVVAVGYAMVINMMATREVWPFFALGFALAA++QLTLI MG I AIA
Sbjct: 194 WLNGGMQVGGAMVVAVGYAMVINMMATREVWPFFALGFALAALNQLTLICMGTIWCAIAL 253
Query: 241 IYLNLSKKGGNGG 253
IY++LSK GG+ G
Sbjct: 254 IYISLSKMGGSKG 266
>ref|YP_138867.1| mannose PTS system component IIC [Streptococcus thermophilus LMG
18311]
ref|YP_140750.1| mannose PTS system component IIC [Streptococcus thermophilus
CNRZ1066]
gb|AAV60052.1| mannose PTS system component IIC [Streptococcus thermophilus LMG
18311]
gb|AAV61935.1| mannose PTS system component IIC [Streptococcus thermophilus
CNRZ1066]
Length = 275
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 225/275 (81%), Gaps = 6/275 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSD+SIISAILVV +AF AGLE ILDQFQ HQPLVACTLIG TG+L AG++LGG+LQM+
Sbjct: 1 MSDMSIISAILVVAVAFLAGLESILDQFQFHQPLVACTLIGAATGNLTAGIMLGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
L WANIGAAVAPD ALASVAAAII+VK G FT +GI A + AI LAVAGLFLTM VRT
Sbjct: 61 TLAWANIGAAVAPDVALASVAAAIILVKGGKFTAEGIGVAIAIAILLAVAGLFLTMPVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
S A VHA DKAA GN AG+ER ++++LLLQGLRIAVPAALL+A+P +VQ L MP+
Sbjct: 121 ASIAFVHAADKAAEHGNIAGVERAYYLSLLLQGLRIAVPAALLLAIPAQSVQHALGLMPD 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+ +G MVVAVGYAM+INMMATREVWPFFA+GFALAAISQLTLIA+ IGVAIAF
Sbjct: 181 WLTHGLVVGSGMVVAVGYAMIINMMATREVWPFFAIGFALAAISQLTLIALCAIGVAIAF 240
Query: 241 IYLNLSKK------GGNGGNAAGSADPIGDILEDY 269
IYLNLSK+ G GG ++GS DPIGDILEDY
Sbjct: 241 IYLNLSKQGGGNGGGNGGGTSSGSGDPIGDILEDY 275
>ref|YP_001035844.1| Phosphotransferase system, mannose-specific EIIC, putative
[Streptococcus sanguinis SK36]
gb|ABN45294.1| Phosphotransferase system, mannose-specific EIIC, putative
[Streptococcus sanguinis SK36]
Length = 268
Score = 357 bits (915), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 205/268 (76%), Positives = 228/268 (85%), Gaps = 2/268 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SIIS +LVV +AF AGLEGILDQFQ HQPLVACTLIGLVTG+L AGV+LGG+LQ++ALG
Sbjct: 1 MSIISMVLVVFVAFLAGLEGILDQFQFHQPLVACTLIGLVTGNLAAGVMLGGSLQLIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVAAAIIMV GDF+ KGI A AIPLAVAGLFLTMIVRTLS
Sbjct: 61 WANIGAAVAPDAALASVAAAIIMVLGGDFSSKGIAVAQGVAIPLAVAGLFLTMIVRTLSV 120
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
LVH D AA +G+ G+ER HFIAL +QG RIA+PAALL+ +P +V+S L AMP WL+
Sbjct: 121 GLVHGADAAAKKGDIKGVERAHFIALFMQGARIAIPAALLLMIPAESVKSALEAMPAWLS 180
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
EGMQIGG MVVAVGYAMVINMMATREVWPFFA+GFALAA+S+LTLIA+G IGVAIA IYL
Sbjct: 181 EGMQIGGGMVVAVGYAMVINMMATREVWPFFAIGFALAAVSELTLIALGAIGVAIALIYL 240
Query: 244 NLSKKGGNGGN--AAGSADPIGDILEDY 269
LSKKGGNGG A S DPIGDILEDY
Sbjct: 241 ALSKKGGNGGGGATASSNDPIGDILEDY 268
>ref|NP_344821.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae TIGR4]
ref|NP_357854.1| Phosphotransferase system, mannose-specific EIIC [Streptococcus
pneumoniae R6]
ref|ZP_01407865.1| hypothetical protein SpneT_02001698 [Streptococcus pneumoniae
TIGR4]
ref|YP_815781.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae D39]
ref|ZP_01817009.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP3-BS71]
ref|ZP_01819488.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP6-BS73]
ref|ZP_01823795.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP9-BS68]
ref|ZP_01824427.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP11-BS70]
ref|ZP_01826572.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP14-BS69]
ref|ZP_01829766.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP18-BS74]
ref|ZP_01832460.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP19-BS75]
ref|ZP_01834438.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP23-BS72]
ref|ZP_02709109.1| IICman [Streptococcus pneumoniae CDC1873-00]
ref|ZP_02712193.1| IICman [Streptococcus pneumoniae CDC1087-00]
ref|ZP_02713959.1| IICman [Streptococcus pneumoniae SP195]
ref|ZP_02714930.1| IICman [Streptococcus pneumoniae CDC0288-04]
ref|ZP_02718122.1| IICman [Streptococcus pneumoniae CDC3059-06]
ref|ZP_02722172.1| IICman [Streptococcus pneumoniae MLV-016]
ref|YP_001693810.1| PTS system sorbose-specific EIIC component [Streptococcus
pneumoniae Hungary19A-6]
ref|YP_001835011.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae CGSP14]
gb|AAK74461.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae TIGR4]
gb|AAK99064.1| Phosphotransferase system, mannose-specific EIIC [Streptococcus
pneumoniae R6]
gb|ABJ54159.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae D39]
gb|EDK64323.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP11-BS70]
gb|EDK67046.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP14-BS69]
gb|EDK69354.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP18-BS74]
gb|EDK71721.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP19-BS75]
gb|EDK74949.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP3-BS71]
gb|EDK77562.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP6-BS73]
gb|EDK78131.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP9-BS68]
gb|EDK82521.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae SP23-BS72]
gb|ACA36031.1| PTS system sorbose-specific EIIC component [Streptococcus
pneumoniae Hungary19A-6]
gb|EDT50575.1| IICman [Streptococcus pneumoniae CDC1873-00]
gb|ACB89546.1| PTS system, mannose-specific IIC component [Streptococcus
pneumoniae CGSP14]
gb|EDT90078.1| IICman [Streptococcus pneumoniae CDC1087-00]
gb|EDT92300.1| IICman [Streptococcus pneumoniae SP195]
gb|EDT95375.1| IICman [Streptococcus pneumoniae CDC0288-04]
gb|EDT96719.1| IICman [Streptococcus pneumoniae CDC3059-06]
gb|EDT98377.1| IICman [Streptococcus pneumoniae MLV-016]
Length = 267
Score = 355 bits (911), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/267 (76%), Positives = 229/267 (85%), Gaps = 1/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SIIS +LVV++AFFAGLEGILDQFQ HQPLVACTLIGLVTGHLEAG+ILGG+LQM+ALG
Sbjct: 1 MSIISMVLVVVVAFFAGLEGILDQFQFHQPLVACTLIGLVTGHLEAGIILGGSLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W+NIGAA+APDAALASVAAAIIMV GDFT+ GI A + AIPLAVAGLFLTMIVRT+S
Sbjct: 61 WSNIGAAIAPDAALASVAAAIIMVLGGDFTKTGIGVAQAVAIPLAVAGLFLTMIVRTISV 120
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
LVH D AA +G+F +ER HFIALL QGLRIA+PAALL+ VPT VQS+L+AMP+WL
Sbjct: 121 GLVHTADAAAKKGDFGAVERAHFIALLFQGLRIALPAALLLMVPTETVQSILSAMPDWLK 180
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYAMVINMMATREVWPFFALGF LAA+S +TLI G IGVAIA IYL
Sbjct: 181 DGMAIGGGMVVAVGYAMVINMMATREVWPFFALGFVLAAVSDITLIGFGAIGVAIALIYL 240
Query: 244 NLSKK-GGNGGNAAGSADPIGDILEDY 269
+LSK G GG AA S DPIGDILEDY
Sbjct: 241 HLSKTGGNGGGGAATSNDPIGDILEDY 267
>ref|YP_001728711.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Leuconostoc citreum KM20]
gb|ACA83267.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Leuconostoc citreum KM20]
Length = 269
Score = 355 bits (910), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/269 (72%), Positives = 225/269 (83%), Gaps = 3/269 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SII+ ILVVIIAFFAG+EGILD+FQ+HQPLV+ TLIGLVTGHL AG++LGG+LQM+ALG
Sbjct: 1 MSIIAMILVVIIAFFAGMEGILDEFQIHQPLVSATLIGLVTGHLTAGIVLGGSLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPD ALASVA+AIIMVK +F+ GI A ++AIPLAVAGLFLTMIVRT+S
Sbjct: 61 WANIGAAVAPDIALASVASAIIMVKGNNFSTSGIGVAVASAIPLAVAGLFLTMIVRTISV 120
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
L H D AA EG + IER H + +LLQGLRIA+PAALL+AVP SAVQ+ L AMP+WL
Sbjct: 121 GLTHGADAAAKEGKYQTIERLHLVGILLQGLRIAIPAALLIAVPASAVQNALGAMPDWLT 180
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
GM IGG MVVAVGYA+VINMMATREVWPFFA+GFALAA+SQLTLIA+G IGVA+A IYL
Sbjct: 181 GGMTIGGGMVVAVGYALVINMMATREVWPFFAIGFALAAVSQLTLIALGAIGVALALIYL 240
Query: 244 NLSK---KGGNGGNAAGSADPIGDILEDY 269
NLSK GG G N GS DP+GDIL Y
Sbjct: 241 NLSKMGGNGGGGSNGGGSGDPVGDILNQY 269
>dbj|BAC79247.1| mannose-specific phosphotransferase system component IIC
[Streptococcus bovis]
Length = 267
Score = 351 bits (900), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 212/267 (79%), Positives = 236/267 (88%), Gaps = 1/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+IS ILVV++AFFAGLEGILD+FQ HQPLVACTLIGLVTG+LEAG+ILGG+LQM+AL
Sbjct: 1 MSVISMILVVVVAFFAGLEGILDEFQFHQPLVACTLIGLVTGNLEAGIILGGSLQMIALA 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVAAAIIMVK GDFT KGI A +TAIPLAVAGLFLTM+VRT S
Sbjct: 61 WANIGAAVAPDAALASVAAAIIMVKGGDFTSKGIAVATATAIPLAVAGLFLTMLVRTASV 120
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
ALVH D AA EGN A +ER H +AL LQGLRIAVPAALL+AVPTSAVQS+LNAMP+WL+
Sbjct: 121 ALVHGADAAAKEGNIAAVERTHLVALFLQGLRIAVPAALLLAVPTSAVQSILNAMPDWLS 180
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
GM +GG MVVAVGYAMVINMMAT EVWPFFA+GFA+AAIS LTLIA+G IGVA+AFIYL
Sbjct: 181 GGMAVGGGMVVAVGYAMVINMMATSEVWPFFAIGFAVAAISDLTLIALGTIGVALAFIYL 240
Query: 244 NLSKK-GGNGGNAAGSADPIGDILEDY 269
NLS+K G GG +GS DPIGDILEDY
Sbjct: 241 NLSEKGGNGGGTISGSGDPIGDILEDY 267
>gb|AAP05994.1| IICman [Streptococcus thermophilus]
Length = 275
Score = 351 bits (900), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/275 (73%), Positives = 227/275 (82%), Gaps = 6/275 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSD+SIISAILVV +AF AGLEGILDQFQ HQPLVACTLIG TG+L AG++LGG+LQM+
Sbjct: 1 MSDMSIISAILVVAVAFLAGLEGILDQFQFHQPLVACTLIGAATGNLTAGIMLGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
L WANIGAAVAPD ALASVAAAII+VK G FT +GI A + AI LAVAGLFLTM VRT
Sbjct: 61 TLAWANIGAAVAPDVALASVAAAIILVKGGKFTAEGIGVAIAIAILLAVAGLFLTMPVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
S A VHA DKAA GN AG+ER +++ALLLQGLRIAVPAALL+A+P +VQ L MP+
Sbjct: 121 ASIAFVHAADKAAEHGNIAGVERAYYLALLLQGLRIAVPAALLLAIPAQSVQHALGLMPD 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+ +GG MVVAVGYAM+INMMATREVWPFFA+GFALAAISQLTLIA+ IGVAIAF
Sbjct: 181 WLTHGLVVGGGMVVAVGYAMIINMMATREVWPFFAIGFALAAISQLTLIALSTIGVAIAF 240
Query: 241 IYLNLSKK------GGNGGNAAGSADPIGDILEDY 269
IYLNLSK+ G GG ++GS DPIGDILEDY
Sbjct: 241 IYLNLSKQGGGNGGGNGGGTSSGSGDPIGDILEDY 275
>ref|YP_819868.1| mannose-specific PTS system component IIC [Streptococcus
thermophilus LMD-9]
gb|ABJ65672.1| mannose-specific PTS system component IIC [Streptococcus
thermophilus LMD-9]
Length = 275
Score = 351 bits (900), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/275 (73%), Positives = 227/275 (82%), Gaps = 6/275 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSD+SIISAILVV +AF AGLE ILDQFQ HQPLVACTLIG TG+L AG++LGG+LQM+
Sbjct: 1 MSDMSIISAILVVAVAFLAGLESILDQFQFHQPLVACTLIGAATGNLTAGIMLGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
L WANIGAAVAPD ALASVAAAII+VK G FT +GI A + AI LAVAGLFLTM VRT
Sbjct: 61 TLAWANIGAAVAPDVALASVAAAIILVKGGKFTAEGIGVAIAIAILLAVAGLFLTMPVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
S A VHA DKAA GN AG+ER +++ALLLQGLRIAVPAALL+A+P +VQ L MP+
Sbjct: 121 ASIAFVHAADKAAEHGNIAGVERAYYLALLLQGLRIAVPAALLLAIPAQSVQHALGLMPD 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+ +GG MVVAVGYAM+INMMATREVWPFFA+GFALAAISQLTLIA+G IGVAIAF
Sbjct: 181 WLTHGLVVGGGMVVAVGYAMIINMMATREVWPFFAIGFALAAISQLTLIALGTIGVAIAF 240
Query: 241 IYLNLSKK------GGNGGNAAGSADPIGDILEDY 269
IYLNLSK+ G GG ++GS DPIGDILEDY
Sbjct: 241 IYLNLSKQGGGNGGGNGGGTSSGSGDPIGDILEDY 275
>ref|ZP_02919329.1| hypothetical protein STRINF_00164 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gb|EDT48478.1| hypothetical protein STRINF_00164 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 262
Score = 343 bits (880), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 209/261 (80%), Positives = 232/261 (88%), Gaps = 1/261 (0%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
ILVV++AFFAGLEGILD+FQ HQPLVACTLIGLVTG+LEAG+ILGG+LQM+ALGWANIGA
Sbjct: 2 ILVVVVAFFAGLEGILDEFQFHQPLVACTLIGLVTGNLEAGIILGGSLQMIALGWANIGA 61
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
AVAPDAALAS+AAAIIMVK GDFT KGI A +TAIPLAVAGLFLTM+VRT S ALVH+
Sbjct: 62 AVAPDAALASIAAAIIMVKGGDFTSKGIAVATATAIPLAVAGLFLTMLVRTASVALVHSA 121
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
D AA EGN A +ER H +AL LQGLRIAVPAALL+AVPTSAVQS+LNAMP+WL+ GM +G
Sbjct: 122 DAAAKEGNIAAVERTHLVALFLQGLRIAVPAALLLAVPTSAVQSILNAMPDWLSGGMAVG 181
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK- 248
G MVVAVGYAMVINMMAT EVWPFFA+GFA+AAIS LTLIA+G IGVA+AFIYLNLS K
Sbjct: 182 GGMVVAVGYAMVINMMATSEVWPFFAIGFAVAAISDLTLIALGTIGVALAFIYLNLSAKG 241
Query: 249 GGNGGNAAGSADPIGDILEDY 269
G GG +GS DPIGDILEDY
Sbjct: 242 GNGGGTVSGSGDPIGDILEDY 262
>ref|YP_819227.1| mannose-specific PTS system component IIC [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gb|ABJ62854.1| mannose-specific PTS system component IIC [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 268
Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/255 (70%), Positives = 212/255 (83%), Gaps = 2/255 (0%)
Query: 17 FFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAA 76
FFAG+EGILD+FQ+HQPLV+ TLIGLVTGHL AG+ILGGTLQM+ALGWANIGAAVAPD A
Sbjct: 14 FFAGMEGILDEFQIHQPLVSATLIGLVTGHLTAGIILGGTLQMIALGWANIGAAVAPDVA 73
Query: 77 LASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEG 136
LASVA++IIMVK GDF+ GI+ A ++AIPLAVAGLFLTM+VRT++ L H D AA EG
Sbjct: 74 LASVASSIIMVKGGDFSSTGISVAVASAIPLAVAGLFLTMLVRTVAVGLTHGADAAAKEG 133
Query: 137 NFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAV 196
IER H AL+LQGLRIAVPAA+L+AVP +AV++ L +MP WL GM IGG MVVAV
Sbjct: 134 KIGTIERLHLFALVLQGLRIAVPAAILIAVPAAAVRAALTSMPEWLTGGMAIGGGMVVAV 193
Query: 197 GYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK--KGGNGGN 254
GYA+VINMMATREVWPFFA+GFALAA+S+LTLIA+G IGVA+A IY+NLSK NG N
Sbjct: 194 GYALVINMMATREVWPFFAIGFALAAVSELTLIALGAIGVALALIYINLSKMGGNSNGSN 253
Query: 255 AAGSADPIGDILEDY 269
G +DP+GDIL Y
Sbjct: 254 GGGGSDPVGDILNKY 268
>ref|YP_001450957.1| phosphotransferase system enzyme II [Streptococcus gordonii str.
Challis substr. CH1]
gb|ABV09781.1| phosphotransferase system enzyme II [Streptococcus gordonii str.
Challis substr. CH1]
Length = 267
Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/267 (75%), Positives = 227/267 (85%), Gaps = 1/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SIIS +LVV +AF AGLEGILDQFQ HQP+VACTLIGLVTG+L AGVILGG+LQ++ALG
Sbjct: 1 MSIISMVLVVFVAFLAGLEGILDQFQFHQPIVACTLIGLVTGNLTAGVILGGSLQLIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVAAAIIMV GDF++ GI A + AIPLAVAGLFLTMIVRTLS
Sbjct: 61 WANIGAAVAPDAALASVAAAIIMVLGGDFSKTGIGVAQTVAIPLAVAGLFLTMIVRTLSV 120
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
LVHA D AA +G+ G+ER HFIALL+QGLRIA+PAALL+ VPT +VQ+ LNAMP+WL
Sbjct: 121 GLVHAADAAAKKGDIKGVERAHFIALLMQGLRIAIPAALLLMVPTQSVQAALNAMPDWLK 180
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYAMVINMMATREVWPFFA+GF LAA+S +TLI G IGVA+A IYL
Sbjct: 181 DGMSIGGGMVVAVGYAMVINMMATREVWPFFAIGFVLAAVSDITLIGFGAIGVALALIYL 240
Query: 244 NL-SKKGGNGGNAAGSADPIGDILEDY 269
NL K G GG AA S DPIGDILEDY
Sbjct: 241 NLSKKGGNGGGAAASSNDPIGDILEDY 267
>ref|NP_722189.1| putative PTS system, mannose-specific component IIC [Streptococcus
mutans UA159]
gb|AAN59495.1|AE015014_3 putative PTS system, mannose-specific component IIC [Streptococcus
mutans UA159]
Length = 272
Score = 336 bits (862), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/260 (64%), Positives = 207/260 (79%), Gaps = 6/260 (2%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AGL+GILDQFQ HQPLV+CTLIGL +GH AG++LGGTLQ LALGWANIGAAVAPD
Sbjct: 13 AFLAGLDGILDQFQFHQPLVSCTLIGLASGHTVAGIMLGGTLQFLALGWANIGAAVAPDV 72
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALAS AAA+IM+K GDF+QKGIT AY A+PLA+AGL LTM+VR +S +VH D AA
Sbjct: 73 ALASTAAAVIMIKGGDFSQKGITIAYGVAVPLAIAGLALTMVVRAISIGIVHGADAAAKN 132
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN +ER H+ ALLLQGLRI P ALL+A+P + V+S+L A+P+WL++GM IGG MVVA
Sbjct: 133 GNIRAVERSHYFALLLQGLRIVFPVALLLALPANHVKSILEAIPSWLSDGMTIGGGMVVA 192
Query: 196 VGYAMVINMMATREVWPFFALGFALAAI--SQLTLIAMGVIGVAIAFIYLNLSKKGGNGG 253
VGYAM++NMMATREVWPFF +GF LAAI +Q+TL +G+IGVA+A IY+ L+ + G
Sbjct: 193 VGYAMILNMMATREVWPFFIIGFVLAAIPDTQITLFGLGMIGVALAMIYIALTNQTGRNS 252
Query: 254 NAAGSA----DPIGDILEDY 269
++ ++ DPIGDILEDY
Sbjct: 253 SSGQASSSSNDPIGDILEDY 272
>ref|YP_001199145.1| mannose-specific PTS IIC [Streptococcus suis 05ZYH33]
ref|YP_001201347.1| mannose-specific PTS IIC [Streptococcus suis 98HAH33]
gb|ABP90745.1| mannose-specific PTS IIC [Streptococcus suis 05ZYH33]
gb|ABP92947.1| mannose-specific PTS IIC [Streptococcus suis 98HAH33]
Length = 269
Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/269 (78%), Positives = 238/269 (88%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSDI++ISAILVVI+AFFAGLEGILD+FQ HQPLVACTLIGLVTG+L AGV+LGG+LQM+
Sbjct: 1 MSDITLISAILVVIVAFFAGLEGILDEFQFHQPLVACTLIGLVTGNLAAGVMLGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
ALGWANIGAAVAPDAALASVAAAIIM+K GDF+ +GI A +TAIPLAVAGLFLTMIVRT
Sbjct: 61 ALGWANIGAAVAPDAALASVAAAIIMIKGGDFSTEGIAVATTTAIPLAVAGLFLTMIVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+S LVH D AA + NFA +ER+H ALLLQGLRIAVPAALL+A+P AVQ+VL +MP
Sbjct: 121 ISVGLVHGADNAAKDANFAAVERYHLFALLLQGLRIAVPAALLLAIPAEAVQAVLESMPA 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL+ GM +GG MVVAVGYAMVINMMATREVWPFFALGFA AAIS+LTLIA+GVIGVAIA
Sbjct: 181 WLSGGMAVGGGMVVAVGYAMVINMMATREVWPFFALGFAFAAISKLTLIALGVIGVAIAL 240
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDILEDY 269
IYLNLSK+GG+G A S DPIGDILEDY
Sbjct: 241 IYLNLSKQGGSGNGGASSNDPIGDILEDY 269
>ref|YP_813572.1| mannose-specific PTS system component IIC [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gb|ABJ59134.1| mannose-specific PTS system component IIC [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length = 270
Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 215/270 (79%), Gaps = 4/270 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++ I ILV+++AF AG+EG+LD++Q HQPLVACTLIGLVTG+L G++LGG+LQM+AL
Sbjct: 2 DLNAIQVILVIVVAFLAGMEGVLDEWQFHQPLVACTLIGLVTGNLTLGIMLGGSLQMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GWANIGAA+APD ALA+VA+AII++K G T KGI A AI LAVAGLFLTM+VRT+S
Sbjct: 62 GWANIGAAIAPDTALAAVASAIILIKGGQGT-KGIGTATGLAITLAVAGLFLTMLVRTIS 120
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
TA+VH DK A EGN+ I + +IA+ LQGLRIA+PA LL+A+PT V+S L AMP WL
Sbjct: 121 TAIVHIMDKYAEEGNWRMISVWQWIAVCLQGLRIAIPAGLLLAIPTETVRSALAAMPAWL 180
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
++GM IGG MVVAVGYAMVINMM +REVWPF A+GFALA LTLIA+G IG+++A +Y
Sbjct: 181 SDGMTIGGGMVVAVGYAMVINMMVSREVWPFLAIGFALAGDKDLTLIALGAIGLSMALMY 240
Query: 243 LNLSKKGGNGGN---AAGSADPIGDILEDY 269
L L +K G AAG+ DP+GDI++DY
Sbjct: 241 LALEEKVSKGSGDVAAAGTGDPLGDIIDDY 270
>ref|YP_619526.1| PTS system, mannose-specific enzyme IIC component [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
emb|CAI98573.1| PTS system, mannose-specific enzyme IIC component [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 270
Score = 333 bits (854), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 215/270 (79%), Gaps = 4/270 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++ I ILV+++AF AG+EG+LD++Q HQPLVACTLIGLVTG+L G++LGG+LQM+AL
Sbjct: 2 DLNAIQVILVIVVAFLAGMEGVLDEWQFHQPLVACTLIGLVTGNLTLGIMLGGSLQMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GWANIGAA+APD ALA+VA+AII++K G T KGI A AI LAVAGLFLTM+VRT+S
Sbjct: 62 GWANIGAAIAPDTALAAVASAIILIKGGQGT-KGIGTATGLAITLAVAGLFLTMLVRTIS 120
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
TA+VH DK A EGN+ I + +IA+ LQGLRIA+PA LL+A+PT V+S L AMP WL
Sbjct: 121 TAIVHIMDKYAEEGNWRMISVWQWIAVCLQGLRIAIPAGLLLAIPTETVRSALAAMPAWL 180
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
++GM IGG MVVAVGYAMVI+MM +REVWPF A+GFALA LTLIA+G IG+++A +Y
Sbjct: 181 SDGMTIGGGMVVAVGYAMVIDMMVSREVWPFLAIGFALAGDKDLTLIALGAIGLSMALMY 240
Query: 243 LNLSKKGGNGGN---AAGSADPIGDILEDY 269
L L +K G AAG+ DP+GDI++DY
Sbjct: 241 LALEEKVSKGSGDVAAAGTGDPLGDIIDDY 270
>ref|YP_535548.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
gb|ABD99465.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
Length = 266
Score = 327 bits (839), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/267 (70%), Positives = 224/267 (83%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S IS ILVVI+AFFAGLEGILDQFQ HQPL+ACTLIGLVTG+L AG++LGG+LQM+ALG
Sbjct: 1 MSAISMILVVIVAFFAGLEGILDQFQFHQPLIACTLIGLVTGNLTAGIMLGGSLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALA+VA+AII+VK G T GI+ A + AIPLAVAGLFLTMIVRT+S
Sbjct: 61 WANIGAAVAPDAALAAVASAIILVKGGQGT-AGISTAIAVAIPLAVAGLFLTMIVRTISV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
A++H DK A +GNF GIE + FIALLLQGLRIA+PAA L+ +PTSAV+S L +MP WL
Sbjct: 120 AIIHIMDKEAEKGNFRGIEVWQFIALLLQGLRIALPAAFLLVIPTSAVRSFLESMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYAMVINMMA+REVWPFF +GF +AA+SQLTLIA+G +G+A A IYL
Sbjct: 180 DGMAIGGGMVVAVGYAMVINMMASREVWPFFIIGFVIAAVSQLTLIAIGALGIAFALIYL 239
Query: 244 NLS-KKGGNGGNAAGSADPIGDILEDY 269
L K G G ++ + DP+GDIL+DY
Sbjct: 240 ELESKGGSGNGGSSNTGDPLGDILDDY 266
>gb|AAD46486.1|AF130465_2 mannose-specific phosphotransferase system component IIC
[Streptococcus salivarius]
Length = 271
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 210/271 (77%), Positives = 236/271 (87%), Gaps = 2/271 (0%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSD+SIISAILVV++AF AGLEGILDQFQ HQPLVACTLIG TG+L AG++LGG+LQM+
Sbjct: 1 MSDMSIISAILVVVVAFLAGLEGILDQFQFHQPLVACTLIGAATGNLTAGIMLGGSLQMI 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
AL WANIGAAVAPDAALASVAAAII+VK G+FT +GI A +TAIPLAVAGLFLTM+VRT
Sbjct: 61 ALAWANIGAAVAPDAALASVAAAIILVKGGNFTTEGIGVATATAIPLAVAGLFLTMLVRT 120
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
S ALVHA DKAA GN AG+ER H++ALLLQGLRIAVPAALL+A+P +VQ L MP+
Sbjct: 121 ASVALVHAADKAAESGNIAGVERAHYLALLLQGLRIAVPAALLLAIPAESVQHALGLMPS 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WLN GM +GG MVVAVGYAMVINMMATREVWPFFA+GFA AAISQLTLIA+G IGVAIAF
Sbjct: 181 WLNHGMVVGGGMVVAVGYAMVINMMATREVWPFFAIGFAFAAISQLTLIALGAIGVAIAF 240
Query: 241 IYLNLSKK--GGNGGNAAGSADPIGDILEDY 269
IYLNLSK+ G GG ++GS DPIGDILEDY
Sbjct: 241 IYLNLSKQGGGNGGGTSSGSGDPIGDILEDY 271
>ref|ZP_02420972.1| hypothetical protein ANACAC_03619 [Anaerostipes caccae DSM 14662]
gb|EDR95944.1| hypothetical protein ANACAC_03619 [Anaerostipes caccae DSM 14662]
Length = 266
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 215/267 (80%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S IS +LV+I+AF AG+EG+LD+FQ HQPLVACTLIGLVTG LEAG+ILGGTLQM+ALG
Sbjct: 1 MSAISIVLVIIVAFLAGMEGVLDEFQFHQPLVACTLIGLVTGQLEAGIILGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G T G++ A + AIPLAVAGLFLTM+VRTLS
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGT-AGVSTAIAVAIPLAVAGLFLTMVVRTLSV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
A VH D AA + NF G+E +H IA+ +QGLRIA+PA L+ +P + VQ+ L +MP WL
Sbjct: 120 ACVHRMDAAAEKANFKGVEIWHIIAIAMQGLRIAIPAGALLFIPATTVQNFLTSMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYAMVINMMAT+EVWPFFA+GF +AA+S LTLIA+G IGV++A IYL
Sbjct: 180 DGMAIGGGMVVAVGYAMVINMMATKEVWPFFAIGFCVAALSDLTLIALGAIGVSLALIYL 239
Query: 244 NL-SKKGGNGGNAAGSADPIGDILEDY 269
L G + G + + DP+GDIL +Y
Sbjct: 240 TLSESGGSSNGGGSNTGDPLGDILNNY 266
>ref|ZP_02184141.1| hypothetical protein CAT7_05716 [Carnobacterium sp. AT7]
gb|EDP68993.1| hypothetical protein CAT7_05716 [Carnobacterium sp. AT7]
Length = 266
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 215/267 (80%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SIIS +LV+++AF AG+EGILD+FQ HQPLVACTLIGLVTG+L AG++LGGTLQM+ALG
Sbjct: 1 MSIISIVLVILVAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLTAGIVLGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G G+ A + A+PLAVAGLFLTM+VRTL+
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-AGVPAAIAIAVPLAVAGLFLTMVVRTLAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D AA EGNF IE H A+ +QG+RIA+PA L+ +P + VQS L +MP WL
Sbjct: 120 PIVHLMDSAAEEGNFKKIEWLHLSAVAMQGVRIAIPAGALLFIPAATVQSFLESMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
EGM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 EGMAIGGGMVVAVGYALVINMMATKEVWPFFIIGFVVAAISQLTLIALGALGVALALIYL 239
Query: 244 NLSK-KGGNGGNAAGSADPIGDILEDY 269
NLSK G + G + S DP+GDIL DY
Sbjct: 240 NLSKMGGSSNGGGSNSGDPLGDILNDY 266
>ref|YP_193373.1| mannose-specific PTS system component IIC [Lactobacillus
acidophilus NCFM]
gb|AAV42342.1| mannose-specific PTS system component IIC [Lactobacillus
acidophilus NCFM]
Length = 269
Score = 314 bits (805), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 213/267 (79%), Gaps = 5/267 (1%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILVV +AF AG EGILD++Q HQPLVACTLIGLVTGHL+ GVILGG LQM+ALGWAN
Sbjct: 4 IQMILVVAVAFLAGTEGILDEWQFHQPLVACTLIGLVTGHLDLGVILGGQLQMIALGWAN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAAVAPDAALASVA+AII+V+ G KGI A AIPLAVAGLFLTMIVRT+STA+V
Sbjct: 64 IGAAVAPDAALASVASAIILVEGGQGV-KGIGTATGIAIPLAVAGLFLTMIVRTISTAIV 122
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D A +GN+ I + +IA+ LQGLRIA+PAALL+A+P+ V+ L MP WL+EGM
Sbjct: 123 HVMDAEAKKGNWRMINLWQWIAVCLQGLRIAIPAALLLAIPSETVKGWLAMMPQWLSEGM 182
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
IGG MVVAVGYAMVINMMA++EVWPFFA+GFALAAI LTLIA+G IG+++A +YL L
Sbjct: 183 TIGGGMVVAVGYAMVINMMASKEVWPFFAIGFALAAIKDLTLIALGAIGLSMALMYLALE 242
Query: 247 KK----GGNGGNAAGSADPIGDILEDY 269
K G N +AG+ DP+GDI++DY
Sbjct: 243 SKGGNGGSNNSGSAGTGDPLGDIIDDY 269
>ref|YP_012725.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b F2365]
ref|ZP_00230024.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b H7858]
ref|YP_848286.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria welshimeri serovar 6b str. SLCC5334]
ref|ZP_01926097.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL N1-017]
ref|ZP_01942054.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes 10403S]
ref|ZP_01942652.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes HPB2262]
ref|ZP_02276099.1| hypothetical protein LmonFS_00270 [Listeria monocytogenes FSL
J1-194]
ref|ZP_02283832.1| hypothetical protein LmonoFSL_00195 [Listeria monocytogenes FSL
R2-503]
ref|ZP_02286046.1| hypothetical protein LmonocFSL_00887 [Listeria monocytogenes FSL
J1-175]
ref|ZP_02319048.1| hypothetical protein LmonocytoFSL_00597 [Listeria monocytogenes FSL
J2-064]
ref|ZP_02689090.1| hypothetical protein LmonFSL_18564 [Listeria monocytogenes FSL
J2-071]
gb|AAT02902.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b F2365]
gb|EAL10175.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b H7858]
emb|CAK19501.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
gb|EBA22071.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes 10403S]
gb|EBA30226.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL N1-017]
gb|EBA38328.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes HPB2262]
Length = 268
Score = 314 bits (804), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 214/269 (79%), Gaps = 4/269 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+IS ILVV+IAF AG+EGILD+FQ HQPL+ACTLIGLVTG+L A +ILGGTLQM+ALG
Sbjct: 1 MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G GI A + AIPLAVAGLFLTMIVRTL+
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-AGIPSAIAIAIPLAVAGLFLTMIVRTLAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D+AA +GN +E H A+ +QG+RIA+PAA L+ +P +VQS L AMP WL
Sbjct: 120 PIVHLMDRAAEKGNIRSVEWLHISAICMQGIRIAIPAAALLFIPADSVQSFLEAMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 DGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYL 239
Query: 244 NLSKKGGNGGNAAGSA---DPIGDILEDY 269
NLSK GG N G DP+GDIL DY
Sbjct: 240 NLSKMGGGNSNGGGGGNSRDPLGDILNDY 268
>ref|NP_463630.1| hypothetical protein lmo0097 [Listeria monocytogenes EGD-e]
ref|ZP_00232780.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 1/2a F6854]
ref|ZP_01931522.1| hypothetical protein LMIG_00377 [Listeria monocytogenes FSL N3-165]
ref|ZP_01934094.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes F6900]
ref|ZP_01935221.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J0161]
ref|ZP_01939702.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J2818]
ref|ZP_02278695.1| hypothetical protein LmonF_01152 [Listeria monocytogenes FSL
F2-515]
ref|ZP_02281470.1| hypothetical protein LmonL_00907 [Listeria monocytogenes LO28]
ref|ZP_02308105.1| hypothetical protein LmonocytFSL_00497 [Listeria monocytogenes FSL
J2-003]
gb|AAL60429.1|AF397145_2 EIIMant PTS permease IIC subunit [Listeria monocytogenes]
emb|CAC98312.1| lmo0097 [Listeria monocytogenes]
gb|EAL07434.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 1/2a F6854]
gb|EBA20699.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J0161]
gb|EBA24613.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J2818]
gb|EBA30674.1| hypothetical protein LMIG_00377 [Listeria monocytogenes FSL N3-165]
gb|EBA33343.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes F6900]
Length = 268
Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 214/269 (79%), Gaps = 4/269 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+IS ILVV+IAF AG+EGILD+FQ HQPL+ACTLIGLVTG+L A +ILGGTLQM+ALG
Sbjct: 1 MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G GI A + AIPLAVAGLFLTMIVRTL+
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-AGIPSAIAIAIPLAVAGLFLTMIVRTLAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D+AA +GN +E H A+ +QG+RIA+PAA L+ +P +VQS L AMP WL
Sbjct: 120 PIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 DGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYL 239
Query: 244 NLSKKGGNGGNAAGSA---DPIGDILEDY 269
NLSK GG N G DP+GDIL DY
Sbjct: 240 NLSKMGGGNSNGGGGGNSRDPLGDILNDY 268
>ref|NP_469489.1| hypothetical protein lin0144 [Listeria innocua Clip11262]
emb|CAC95377.1| lin0144 [Listeria innocua]
Length = 268
Score = 313 bits (802), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 214/269 (79%), Gaps = 4/269 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+IS ILVV+IAF AG+EGILD+FQ HQPL+ACTLIGLVTG+L A +ILGGTLQM+ALG
Sbjct: 1 MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G GI A + AIPLAVAGLFLTMIVRTL+
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-AGIPSAIAIAIPLAVAGLFLTMIVRTLAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D+AA +GN +E H A+ +QG+RIA+PAA L+ +P +VQS L AMP WL
Sbjct: 120 PIVHLMDRAAEKGNIRTVEWLHISAICMQGIRIAIPAAALLFIPADSVQSFLEAMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 DGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYL 239
Query: 244 NLSKKGGNGGNAAGSA---DPIGDILEDY 269
NLSK GG N G DP+GDIL DY
Sbjct: 240 NLSKMGGGNSNGGGGGNSRDPLGDILNDY 268
>ref|YP_001576975.1| Mannose-specific PTS system component IIC [Lactobacillus helveticus
DPC 4571]
gb|ABX26684.1| Mannose-specific PTS system component IIC [Lactobacillus helveticus
DPC 4571]
Length = 270
Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 214/268 (79%), Gaps = 6/268 (2%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILVV +AF AG+EGILD++Q HQPLVACTLIGLVTGHL+ GVILGG LQM+ALGWAN
Sbjct: 4 IQMILVVFVAFLAGMEGILDEWQFHQPLVACTLIGLVTGHLDLGVILGGQLQMIALGWAN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAAVAPDAALASVA+AII+V+ G T KGI A AIPLAVAGLFLTMIVRT+STA+V
Sbjct: 64 IGAAVAPDAALASVASAIILVEGGQGT-KGIGTATGIAIPLAVAGLFLTMIVRTISTAIV 122
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D A +G++ I + +IA+ LQGLRIA+PAALL+A+P+ V+ L MP WL++GM
Sbjct: 123 HIMDAEAKKGSWRMINVWQWIAVCLQGLRIAIPAALLLAIPSGTVRGWLAMMPQWLSDGM 182
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
IGG MVVAVGYAMVINMMA++EVWPFF +GFALAAI LTLIA+G IG+++A +YL L
Sbjct: 183 TIGGGMVVAVGYAMVINMMASKEVWPFFTIGFALAAIKDLTLIALGAIGLSMALMYLALE 242
Query: 247 KK-----GGNGGNAAGSADPIGDILEDY 269
K G N + AG+ DP+GDI++DY
Sbjct: 243 AKGGNGGGSNNSDDAGTGDPLGDIIDDY 270
>ref|NP_813832.1| PTS system, mannose-specific IIC component [Enterococcus faecalis
V583]
gb|AAO79904.1| PTS system, mannose-specific IIC component [Enterococcus faecalis
V583]
Length = 267
Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 212/268 (79%), Gaps = 3/268 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+IS ILV+++AF AG+EGILD+FQ HQPLVACTLIGLVTG+LEAG++LGGTLQM+ALG
Sbjct: 1 MSVISIILVLLVAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLEAGIVLGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G KG+ A + A+PLAVAGLFLTMIVRT++
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-KGVPSAIAIAVPLAVAGLFLTMIVRTVAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D AA +GN +E H A+ LQG+RIA+PA L+ +P V++ L +MP WL
Sbjct: 120 PIVHMMDAAAEKGNIKQVEMLHIFAVCLQGIRIAIPAGALLFIPADTVRNFLESMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 DGMAIGGGMVVAVGYALVINMMATKEVWPFFIIGFVVAAISQLTLIALGALGVALALIYL 239
Query: 244 NLSK--KGGNGGNAAGSADPIGDILEDY 269
NLSK N S DP+GDIL DY
Sbjct: 240 NLSKMGGSSNSNGGGNSGDPLGDILNDY 267
>ref|YP_810087.1| mannose-specific PTS system component IIC [Oenococcus oeni PSU-1]
ref|ZP_01543824.1| PTS system, mannose-specific IIC component [Oenococcus oeni ATCC
BAA-1163]
gb|ABJ56422.1| mannose-specific PTS system component IIC [Oenococcus oeni PSU-1]
gb|EAV39907.1| PTS system, mannose-specific IIC component [Oenococcus oeni ATCC
BAA-1163]
Length = 271
Score = 310 bits (793), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/272 (64%), Positives = 218/272 (80%), Gaps = 7/272 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S IS ILVV++AFFAG+EGILD+F+ HQPLVACTLIGLVTGHL GVILGG+LQM+ALG
Sbjct: 1 MSAISMILVVVVAFFAGMEGILDEFEFHQPLVACTLIGLVTGHLVLGVILGGSLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASV +AII+++ G T KGI A + A+ LAVAGLFLTMIVRT++T
Sbjct: 61 WANIGAAVAPDAALASVGSAIILIEGGQGT-KGIGSAIAVAVTLAVAGLFLTMIVRTITT 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D AA EG I+ + IA+ LQGLRIA+PAALL+ +P+S V++VLNAMP+WL+
Sbjct: 120 FIVHIMDHAAEEGKSRIIDMWQVIAICLQGLRIAIPAALLLVIPSSEVRAVLNAMPSWLS 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYAMVINMMA+REVWPFF +GF +A+I+ LTLIA+G +GV++A +YL
Sbjct: 180 DGMTIGGGMVVAVGYAMVINMMASREVWPFFVIGFVIASITDLTLIAIGALGVSLALMYL 239
Query: 244 NLSK------KGGNGGNAAGSADPIGDILEDY 269
L K GN G + DP+GDIL+ Y
Sbjct: 240 ALDKGGSNGNSSGNSGGGNNTGDPLGDILDAY 271
>ref|ZP_00739614.1| PTS system, mannose-specific IIC component [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gb|EAO56131.1| PTS system, mannose-specific IIC component [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 266
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 210/267 (78%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV++IAF AG+EGILD+FQ HQPLVACTLIGLVTG+LEAG++LGGTLQM+ALG
Sbjct: 1 MSTIEIILVILIAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLEAGIVLGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G G+ A + A+PLAVAGLFLTMIVRTL+
Sbjct: 61 WANIGAAVAPDAALASVASAIILVLGGQGV-SGVASAIAVAVPLAVAGLFLTMIVRTLAV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+VH D AA EGN IE H A+ LQG+RIA+PA L+ +P +VQ L +MP WL
Sbjct: 120 PIVHMMDTAAEEGNIKKIEVLHIAAVCLQGIRIAIPAGALLFIPAQSVQGFLESMPAWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYL
Sbjct: 180 DGMAIGGGMVVAVGYALVINMMATKEVWPFFIIGFVIAAISQLTLIALGALGVALALIYL 239
Query: 244 NLSK-KGGNGGNAAGSADPIGDILEDY 269
+LSK G + G S DP+ DIL DY
Sbjct: 240 SLSKMGGSSNGGGGNSGDPLDDILNDY 266
>ref|ZP_02619155.1| IICman [Clostridium botulinum Bf]
gb|EDT84415.1| IICman [Clostridium botulinum Bf]
Length = 268
Score = 306 bits (785), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 202/255 (79%), Gaps = 2/255 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+EGILD+FQ HQP+VACTLIGLVTG+L +ILG TLQM+A GWANIGA+VAPDA
Sbjct: 15 AFLAGVEGILDEFQFHQPIVACTLIGLVTGNLVPCLILGRTLQMMASGWANIGASVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVA+AII+V G ++G+ A + A+PLAVAGL LT+I RT++TA VH D AA +
Sbjct: 75 ALASVASAIILVLGGQ-GREGVHSAIAIAVPLAVAGLLLTIICRTIATAFVHFMDAAAKK 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN IE + +A+ LQG+RIA+PAAL++A+ + ++LN+MP WL G+ IGG MVVA
Sbjct: 134 GNIKAIEMWQIVAICLQGIRIAIPAALILAIGDGPIGALLNSMPAWLTGGLAIGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNG-GN 254
VGYAMVINMMAT+EVWPFFA+GF LA +S++TLI +G IGVA+A +YL L K+GG G G
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATVSEITLIGLGAIGVALALVYLALCKQGGLGNGE 253
Query: 255 AAGSADPIGDILEDY 269
++ + DP+GDI++ Y
Sbjct: 254 SSNTGDPLGDIIDRY 268
>ref|YP_698130.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens SM101]
gb|ABG86812.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens SM101]
Length = 267
Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 206/254 (81%), Gaps = 1/254 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+ GILD+FQ HQPLVACTLIGLVTG+L +ILGG+LQM+ALGWANIGAAVAPD+
Sbjct: 15 AFLAGMGGILDEFQFHQPLVACTLIGLVTGNLIPCLILGGSLQMIALGWANIGAAVAPDS 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVAAAII+V SG+ Q GI+ A + AIPLAVAGL LT+I RT++TA VH D AA E
Sbjct: 75 ALASVAAAIILVLSGE-GQAGISSAIAIAIPLAVAGLLLTIICRTIATAFVHFMDAAAKE 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
G+ +E +HFIA+L+QG+RIA+PAAL++ + + ++L +MP WL +G+ +GG MVVA
Sbjct: 134 GDIRKVEMWHFIAILMQGVRIALPAALILLIGAGPISALLASMPAWLTDGLAVGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNA 255
VGYAMVINMMAT+EVWPFFA+GF LA I QLTLI +G IGVA+A IYL LSKKGG+G +
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATIPQLTLIGLGAIGVALALIYLALSKKGGSGNSG 253
Query: 256 AGSADPIGDILEDY 269
+ DP+GDI++ Y
Sbjct: 254 SNIGDPVGDIIDRY 267
>ref|NP_965751.1| phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC,
probable mannose specific [Lactobacillus johnsonii NCC
533]
gb|AAS09717.1| phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC,
probable mannose specific [Lactobacillus johnsonii NCC
533]
Length = 267
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 215/265 (81%), Gaps = 3/265 (1%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILVVI+AFFAG+ GILD+FQ HQPLVACTLIGLVTG+L G+ILGG+LQM+ALGWAN
Sbjct: 4 IQMILVVIVAFFAGMGGILDEFQFHQPLVACTLIGLVTGNLTIGIILGGSLQMIALGWAN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAAVAPDAALASVA+ II+V+ G + T A AIPLAVAGLFLTM+VRT+S A+V
Sbjct: 64 IGAAVAPDAALASVASTIILVQGGQGQKGIGT-AIGIAIPLAVAGLFLTMLVRTISVAIV 122
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D+ A E N+ I+R+ IA+ LQGLRIA+PAALL+A+P S V++ LNAMP WLNEGM
Sbjct: 123 HIMDRKAEEANWRAIDRWQMIAVALQGLRIAIPAALLLAIPASVVRAGLNAMPAWLNEGM 182
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
IGG MVVAVGYAMVINMMA+REVWPFF +GF LAA+ +LTLIA+G IG+++A +YL L
Sbjct: 183 TIGGGMVVAVGYAMVINMMASREVWPFFIIGFCLAAVKELTLIALGGIGISLAIMYLALE 242
Query: 247 --KKGGNGGNAAGSADPIGDILEDY 269
K G N + +GS DP+GDIL+DY
Sbjct: 243 GSKGGNNNNSNSGSGDPLGDILDDY 267
>ref|YP_815622.1| mannose-specific PTS system component IIC [Lactobacillus gasseri
ATCC 33323]
gb|ABJ61081.1| mannose-specific PTS system component IIC [Lactobacillus gasseri
ATCC 33323]
Length = 267
Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 215/265 (81%), Gaps = 3/265 (1%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILVV++AFFAG+ GILD+FQ HQPLVACTLIGLVTG+L G+ILGG+LQM+ALGWAN
Sbjct: 4 IQMILVVVVAFFAGMGGILDEFQFHQPLVACTLIGLVTGNLTIGIILGGSLQMIALGWAN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAAVAPDAALASVA+ II+V+ G + T A AIPLAVAGLFLTM+VRT+S A+V
Sbjct: 64 IGAAVAPDAALASVASTIILVQGGQGQKGIGT-AIGIAIPLAVAGLFLTMLVRTISVAIV 122
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D+ A E N+ I+R+ IA+ LQGLRIA+PAALL+A+P S V++ LNAMP WLNEGM
Sbjct: 123 HIMDRKAEEANWKAIDRWQMIAVALQGLRIAIPAALLLAIPASVVRAGLNAMPAWLNEGM 182
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
IGG MVVAVGYAMVINMMA+REVWPFF +GF LAA+ +LTLIA+G IG+++A +YL L
Sbjct: 183 TIGGGMVVAVGYAMVINMMASREVWPFFIIGFCLAAVKELTLIALGGIGISLAIMYLALE 242
Query: 247 --KKGGNGGNAAGSADPIGDILEDY 269
K G N + +GS DP+GDIL+DY
Sbjct: 243 GSKGGNNNNSNSGSGDPLGDILDDY 267
>ref|ZP_01696349.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Bacillus coagulans 36D1]
gb|EAY44426.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Bacillus coagulans 36D1]
Length = 269
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 218/269 (81%), Gaps = 3/269 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++I+ ILV I+AF AG+EGILDQFQ HQPLVACTLIGLVTG+L +ILGGTLQM+AL
Sbjct: 2 DLNIVQMILVFIVAFLAGMEGILDQFQFHQPLVACTLIGLVTGNLVPCIILGGTLQMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GWANIGAAVAPDAALASVA+AII+V SG + G++ A + A+PLAVAGL LT+IVRT++
Sbjct: 62 GWANIGAAVAPDAALASVASAIILVLSGA-GKAGVSSAIAIAVPLAVAGLLLTIIVRTIA 120
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +VH D AA EGN +E +H +A+ LQGLRIA+PA L++A+ V+ +L+AMP WL
Sbjct: 121 TGIVHLMDAAAREGNIRTVEFWHIVAICLQGLRIAIPAVLVLAIGAGPVRDLLSAMPTWL 180
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
+G+ IGG MVVAVGYAMVINMMATREVWPFFA+GF LA +SQ+TLI +G IGV++A IY
Sbjct: 181 TDGLAIGGGMVVAVGYAMVINMMATREVWPFFAIGFVLATVSQITLIGLGGIGVSLALIY 240
Query: 243 LNLSKKGGNGGNA--AGSADPIGDILEDY 269
L LSK+GG+G A + DP+GDI+++Y
Sbjct: 241 LALSKQGGSGKGGGNANTGDPLGDIIDNY 269
>ref|YP_001843208.1| PTS system mannose-specific IIC component [Lactobacillus fermentum
IFO 3956]
dbj|BAG26728.1| PTS system mannose-specific IIC component [Lactobacillus fermentum
IFO 3956]
Length = 267
Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 209/268 (77%), Gaps = 5/268 (1%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+IS ILV+I AF AG+EG+LD+FQ HQPLVACTLIGL TGHL ++LGG+LQM+ALGWA
Sbjct: 1 MISVILVIIFAFLAGMEGVLDEFQFHQPLVACTLIGLATGHLVPCIMLGGSLQMIALGWA 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
NIGAAVAPD ALASVA+AII V+ G K + A + AIPLAVAGLFLTM+VRT+S A+
Sbjct: 61 NIGAAVAPDIALASVASAIIFVQGGG-QSKDVGTAIAIAIPLAVAGLFLTMVVRTISVAI 119
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
H D+ A +G+ G+ + IAL LQGLRIA+PA L+++P+S V+ LN+MP WL +G
Sbjct: 120 SHIMDREAEKGSIRGVNTWQLIALSLQGLRIAIPAIALMSIPSSIVRDFLNSMPAWLTDG 179
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
M IGG MVVAVGYAMVINM+ATREVWPFF +GF LAA+SQLTLIA+G +G+A+ +YL L
Sbjct: 180 MTIGGGMVVAVGYAMVINMIATREVWPFFIIGFVLAAVSQLTLIAIGALGLALTLLYLQL 239
Query: 246 SKKGGNGGNAA----GSADPIGDILEDY 269
KGG G ++ + DP+GDIL+DY
Sbjct: 240 ESKGGGNGGSSNGGQSAGDPLGDILDDY 267
>ref|ZP_02437729.1| hypothetical protein CLOSS21_00164 [Clostridium sp. SS2/1]
gb|EDS23230.1| hypothetical protein CLOSS21_00164 [Clostridium sp. SS2/1]
Length = 260
Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 176/260 (67%), Positives = 215/260 (82%), Gaps = 1/260 (0%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
+LVVI+AF AG+EG+LD+FQ HQPLVACTLIGLVTG L +ILGG+LQM+ALGWANIGA
Sbjct: 2 VLVVIVAFLAGMEGVLDEFQFHQPLVACTLIGLVTGQLVPCIILGGSLQMIALGWANIGA 61
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
AVAPDAALA+VA+AII+V+ G + G+ A + AIPLAVAGLFLTMIVRTLS VH
Sbjct: 62 AVAPDAALAAVASAIILVQGGQ-GRAGVDTAIAVAIPLAVAGLFLTMIVRTLSVICVHQM 120
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
D AAA+G+F G+E +H IA+ LQG+RIA+PAA L+A+P+SAV + LN+MP WL +GM IG
Sbjct: 121 DAAAAKGSFKGVEAWHIIAVCLQGIRIAIPAAALLAIPSSAVAAALNSMPAWLTDGMSIG 180
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
G MVVAVGYAMVINMMAT+EVWPFFA+GF LAA+S LTLIA+GVI V++A IYL LS+
Sbjct: 181 GGMVVAVGYAMVINMMATKEVWPFFAIGFCLAAVSDLTLIALGVIAVSMALIYLKLSENA 240
Query: 250 GNGGNAAGSADPIGDILEDY 269
G+G + + DP+GDIL DY
Sbjct: 241 GSGNGGSNTGDPLGDILNDY 260
>ref|ZP_01772256.1| Hypothetical protein COLAER_01260 [Collinsella aerofaciens ATCC
25986]
gb|EBA39672.1| Hypothetical protein COLAER_01260 [Collinsella aerofaciens ATCC
25986]
Length = 272
Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/271 (62%), Positives = 214/271 (78%), Gaps = 5/271 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I+ +LV I+A AG+EGILD+FQ HQPLVACTLIGLVTGHL+ G++LGG+LQM+ALG
Sbjct: 1 MSAITILLVAIVALLAGMEGILDEFQFHQPLVACTLIGLVTGHLQEGILLGGSLQMMALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKS----GDFTQKGITFAYSTAIPLAVAGLFLTMIVR 119
WAN+GAAVAPDAALASVA++IIMV + + K +T A + A+PL+VAGLFLTMI R
Sbjct: 61 WANVGAAVAPDAALASVASSIIMVLALNGGATDSAKAVTTAIAVAVPLSVAGLFLTMICR 120
Query: 120 TLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMP 179
T++TA+ HA D A +G+F+GIER+ + A+L+QGLRIA+PA LL +P AV + LNAMP
Sbjct: 121 TIATAIAHAMDGCAEKGDFSGIERWQYAAILMQGLRIAIPAVLLCVIPAEAVTNALNAMP 180
Query: 180 NWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA 239
+WL+ GM +GG MV +VGYAMVINMMAT+E WPFF LGF LAAI QLTLIA+G+IG+++A
Sbjct: 181 DWLSGGMAVGGGMVASVGYAMVINMMATKETWPFFVLGFVLAAIPQLTLIALGLIGISLA 240
Query: 240 FIYLNLSKKGGN-GGNAAGSADPIGDILEDY 269
IYL L GG GS DP+GDIL DY
Sbjct: 241 LIYLGLKDLAKQGGGMGGGSGDPLGDILNDY 271
>gb|AAW21986.1| mannose-specific PTS IIC [Streptococcus suis]
Length = 243
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/243 (77%), Positives = 212/243 (87%)
Query: 27 QFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIM 86
+FQ HQPLVACTLIGLVTG+L AGV+LGG+LQM+ALGWANIGAAVAPDAALASVAAAIIM
Sbjct: 1 EFQFHQPLVACTLIGLVTGNLAAGVMLGGSLQMIALGWANIGAAVAPDAALASVAAAIIM 60
Query: 87 VKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHF 146
+K GDF+ +GI A +TAIPLAVAGLFLTMIVRT+S LVH D AA + NFA +ER+H
Sbjct: 61 IKGGDFSTEGIAVATTTAIPLAVAGLFLTMIVRTISVGLVHGADNAAKDANFAAVERYHL 120
Query: 147 IALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMA 206
ALLLQGLRIAVPAALL+A+P AVQ+VL +MP WL+ GM +GG MVVAVGYAMVINMMA
Sbjct: 121 FALLLQGLRIAVPAALLLAIPAEAVQAVLESMPAWLSGGMAVGGGMVVAVGYAMVINMMA 180
Query: 207 TREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSADPIGDIL 266
TREVWPFFALGFA AAIS+LTLIA+GVIGVAIA IYLNLSK+GG+G A S DPIGDIL
Sbjct: 181 TREVWPFFALGFAFAAISKLTLIALGVIGVAIALIYLNLSKQGGSGNGGASSNDPIGDIL 240
Query: 267 EDY 269
EDY
Sbjct: 241 EDY 243
>ref|ZP_02950888.1| fructose permease iic component [Clostridium butyricum 5521]
gb|EDT74110.1| fructose permease iic component [Clostridium butyricum 5521]
Length = 268
Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 210/267 (78%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++++ ILV+ +AF AG+EGILD+FQ HQPLVACTLIGLVTG+L +ILGGTLQ++ALG
Sbjct: 3 LNMLQIILVIAVAFLAGIEGILDEFQFHQPLVACTLIGLVTGNLVPCLILGGTLQLIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V SG + G++ A + AIPLAVAGL LT+I RT++T
Sbjct: 63 WANIGAAVAPDAALASVASAIILVLSGQ-GEAGVSSAIAIAIPLAVAGLLLTIICRTIAT 121
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
A VH D AA EGN IE + A+ LQG+RIA+PA +++ V + S+L +MP WL
Sbjct: 122 AFVHFMDAAAKEGNLRAIEMWQVAAICLQGIRIAIPAGIILIVGEGPISSLLASMPQWLT 181
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
G+ IGG MVVAVGYAMVINMMAT+EVWPFFA+GF +A ISQ+TLI +GVIGVA+A IYL
Sbjct: 182 SGLAIGGGMVVAVGYAMVINMMATKEVWPFFAIGFVVATISQVTLIGLGVIGVALALIYL 241
Query: 244 NLSKK-GGNGGNAAGSADPIGDILEDY 269
LSK+ G G ++ + DP+GDI++ Y
Sbjct: 242 TLSKQGGTGNGGSSNTGDPLGDIIDRY 268
>ref|YP_001032066.1| PTS system, mannose-specific IIC component [Lactococcus lactis
subsp. cremoris MG1363]
emb|CAL97332.1| PTS system, mannose-specific IIC component [Lactococcus lactis
subsp. cremoris MG1363]
Length = 270
Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 214/272 (78%), Gaps = 8/272 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+ ++S ILV+++AF AGLEGILDQ+Q HQP++AC+LIG+VTGH AG+ILGG+LQ++AL
Sbjct: 2 EYGVLSVILVILVAFLAGLEGILDQWQFHQPIIACSLIGIVTGHASAGIILGGSLQLIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIP----LAVAGLFLTMIV 118
GWAN+GAAVAPDAALAS+A++I+MV+S +F +T T +P LA AGL LT +V
Sbjct: 62 GWANVGAAVAPDAALASIASSILMVQSNNFD---LTHIMGTIVPAAILLATAGLVLTTLV 118
Query: 119 RTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
R LS LVH D+AA G+++G+E +HFIAL+ QGLRIA+PA LL+ + A+Q+ L A+
Sbjct: 119 RMLSVVLVHQADRAAENGSYSGVEMWHFIALICQGLRIAIPAGLLLVISPEAIQNALAAI 178
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
P ++ G+ +GG MVVAVGYAMVIN+MATREVWPFF LGFALA IS+LTLIA GV+GV I
Sbjct: 179 PPVISGGLAVGGGMVVAVGYAMVINLMATREVWPFFFLGFALAPISELTLIATGVLGVVI 238
Query: 239 AFIYLNLSKKGGNG-GNAAGSADPIGDILEDY 269
A +YLNL GG+G G A+ S DPIGDIL DY
Sbjct: 239 AIVYLNLQSSGGSGNGTASSSGDPIGDILNDY 270
>ref|YP_001885572.1| PTS system sorbose-specific iic component [Clostridium botulinum B
str. Eklund 17B]
gb|ACD22658.1| PTS system sorbose-specific iic component [Clostridium botulinum B
str. Eklund 17B]
Length = 269
Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/255 (64%), Positives = 201/255 (78%), Gaps = 1/255 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+EGILD+FQ HQPLVACTLIGLVTG+L +ILGGTLQM+ALGWANIGAAVAPDA
Sbjct: 15 AFLAGVEGILDEFQFHQPLVACTLIGLVTGNLLPCLILGGTLQMMALGWANIGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVA+AII+V G ++GIT A + A+PLAVAGL LT+I RT++TA VH D AA E
Sbjct: 75 ALASVASAIILVLGGQTGKEGITAAIAIAVPLAVAGLLLTIICRTIATAFVHFMDAAARE 134
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN IE + A+ LQG+RIA+PAAL++ + + +L AMP WL +G+ IGG MVVA
Sbjct: 135 GNIRAIEMWQIAAICLQGIRIAIPAALILIIGAGPISGLLAAMPAWLTDGLAIGGGMVVA 194
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK-GGNGGN 254
VGYAMVINMMAT+EVWPFFA+GF LA ISQ+TLI +G IGVA+A IYL LSK+ G G
Sbjct: 195 VGYAMVINMMATKEVWPFFAIGFVLATISQITLIGLGAIGVALALIYLALSKQGGVGNGG 254
Query: 255 AAGSADPIGDILEDY 269
++ + DP+GDI++ Y
Sbjct: 255 SSNTGDPLGDIIDRY 269
>ref|YP_395063.1| Mannose-specific phosphotransferase system, enzyme IIC
[Lactobacillus sakei subsp. sakei 23K]
emb|CAI54751.1| Mannose-specific phosphotransferase system, enzyme IIC
[Lactobacillus sakei subsp. sakei 23K]
Length = 268
Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 215/268 (80%), Gaps = 2/268 (0%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++ I ILV+ +AF AG+EGILDQF HQP++ACTLIGLVTG+L +ILGGTLQM+AL
Sbjct: 2 DLNFIQVILVIFVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLLPCLILGGTLQMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GWAN+GAAVAPDAALAS+A+AII+V G + G+T A + A+PLAVAGL LT+IVRTL+
Sbjct: 62 GWANVGAAVAPDAALASIASAIILVLGGQ-GKAGVTSAIAIAVPLAVAGLLLTIIVRTLA 120
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +VH D AA EGNF IE + +IA+++QG+RIA+PA L++A+ V+ +L AMP WL
Sbjct: 121 TGIVHIMDAAAKEGNFRKIEMWQYIAIIMQGVRIAIPAGLILAIGAGPVKEMLTAMPVWL 180
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
+G+ IGG MVVAVGYAMVINMMAT+EVWPFFA+GF LA ISQLTLI +G IG+++A IY
Sbjct: 181 TDGLAIGGGMVVAVGYAMVINMMATKEVWPFFAIGFVLATISQLTLIGLGAIGISLALIY 240
Query: 243 LNLSKK-GGNGGNAAGSADPIGDILEDY 269
L LSK+ GN G + + DP+GDI+++Y
Sbjct: 241 LALSKQGSGNNGGGSNTGDPLGDIIDNY 268
>ref|YP_811464.1| mannose-specific PTS system component IIC [Lactococcus lactis
subsp. cremoris SK11]
gb|ABJ73351.1| mannose-specific PTS system component IIC [Lactococcus lactis
subsp. cremoris SK11]
Length = 270
Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 213/272 (78%), Gaps = 8/272 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+ ++S ILV+++AF AGLEGILDQ+Q HQP++AC+LIG+VTGH AG+ILGG+LQ++AL
Sbjct: 2 EYGVLSVILVILVAFLAGLEGILDQWQFHQPIIACSLIGIVTGHASAGIILGGSLQLIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIP----LAVAGLFLTMIV 118
GWAN+GAAVAPDAALAS+A++I+MV+S F +T T +P LA AGL LT +V
Sbjct: 62 GWANVGAAVAPDAALASIASSILMVQSNTFD---LTHIMGTIVPAAILLATAGLVLTTLV 118
Query: 119 RTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
R LS LVH D+AA G+++G+E +HFIAL+ QGLRIA+PA LL+ + A+Q+ L A+
Sbjct: 119 RMLSVVLVHQADRAAENGSYSGVEMWHFIALICQGLRIAIPAGLLLVISPEAIQNALAAI 178
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
P ++ G+ +GG MVVAVGYAMVIN+MATREVWPFF LGFALA IS+LTLIA GV+GV I
Sbjct: 179 PPVISGGLAVGGGMVVAVGYAMVINLMATREVWPFFFLGFALAPISELTLIATGVLGVVI 238
Query: 239 AFIYLNLSKKGGNG-GNAAGSADPIGDILEDY 269
A +YLNL GG+G G A+ S DPIGDIL DY
Sbjct: 239 AIVYLNLQSSGGSGNGTASSSGDPIGDILNDY 270
>ref|ZP_02613920.1| IICman [Clostridium botulinum NCTC 2916]
gb|EDT81768.1| IICman [Clostridium botulinum NCTC 2916]
Length = 268
Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/255 (61%), Positives = 202/255 (79%), Gaps = 2/255 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+EGILD+FQ HQP+VACTLIGLVTG+L +ILG TLQM+A GWANIGAAVAPDA
Sbjct: 15 AFLAGVEGILDEFQFHQPIVACTLIGLVTGNLVPCLILGRTLQMMASGWANIGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVA+AII+V G ++G+ A + A+PLAVAGL LT+I RT++TA VH D AA +
Sbjct: 75 ALASVASAIILVLGGQ-GREGVHSAIAIAVPLAVAGLLLTIICRTIATAFVHFMDAAAKK 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN IE + +A+ LQG+RIA+PAAL++A+ + ++LN+MP WL G+ IGG MVVA
Sbjct: 134 GNIKAIEMWQIVAICLQGIRIAIPAALILAIGDGPIGALLNSMPAWLTGGLAIGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNG-GN 254
VGYAMVINMMAT+EVWPFFA+GF LA +S++TLI +G IGVA+A +YL L K+GG G G
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATVSEITLIGLGAIGVALALVYLALCKQGGLGNGE 253
Query: 255 AAGSADPIGDILEDY 269
++ + DP+GDI++ Y
Sbjct: 254 SSNTGDPLGDIIDRY 268
>ref|NP_784349.1| mannose PTS, EIIC [Lactobacillus plantarum WCFS1]
emb|CAD63190.1| mannose PTS, EIIC [Lactobacillus plantarum WCFS1]
Length = 268
Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 215/268 (80%), Gaps = 2/268 (0%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+++ I ILVV++AF AG+EGILD+F HQP+VAC LIGLVTG L +ILGG+LQM+AL
Sbjct: 2 NLNAIQMILVVLVAFLAGMEGILDEFHFHQPVVACALIGLVTGQLVPCIILGGSLQMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW+N+GAAVAPDAALA++A+AII+V G + G++ A + A+PLAVAGL LT++ RTL+
Sbjct: 62 GWSNVGAAVAPDAALAAIASAIILVLGGQ-GRAGVSSAIAIAVPLAVAGLLLTILARTLA 120
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +VH D+AA EG+F +E +H +A+ +QGLRIA+PAAL++AV V+S+LNAMP WL
Sbjct: 121 TIIVHIMDRAAEEGSFGKLEFWHVLAICMQGLRIAIPAALILAVGAGPVKSMLNAMPAWL 180
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
+G+ IGG MVVAVGYAMVINMMA+RE+WPFFALGF LAA+S++TLI +G IGVA+A IY
Sbjct: 181 TDGLSIGGGMVVAVGYAMVINMMASREMWPFFALGFVLAAVSEITLIGLGAIGVAMALIY 240
Query: 243 LNLSK-KGGNGGNAAGSADPIGDILEDY 269
LNLSK G G + + DP+GDI++ Y
Sbjct: 241 LNLSKMGGSGNGGGSNTGDPVGDIIDKY 268
>ref|ZP_02866535.1| hypothetical protein CLOSPI_00335 [Clostridium spiroforme DSM 1552]
ref|ZP_02868365.1| hypothetical protein CLOSPI_02207 [Clostridium spiroforme DSM 1552]
gb|EDS73782.1| hypothetical protein CLOSPI_02207 [Clostridium spiroforme DSM 1552]
gb|EDS75805.1| hypothetical protein CLOSPI_00335 [Clostridium spiroforme DSM 1552]
Length = 272
Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/261 (62%), Positives = 198/261 (75%), Gaps = 8/261 (3%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
A AG+EG+LD+FQ HQPLVACTLIG+V+GH G+ILGG+LQM+ALGWAN+GAA+APDA
Sbjct: 13 ALLAGMEGVLDEFQFHQPLVACTLIGIVSGHATEGIILGGSLQMIALGWANVGAAIAPDA 72
Query: 76 ALASVAAAIIMV-----KSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGD 130
ALASVA+AIIMV S D Q I+ + + AIPL+VAGLFLTMI RT++ +VH D
Sbjct: 73 ALASVASAIIMVLGLEGGSTD-VQTAISTSIAVAIPLSVAGLFLTMICRTIAIPMVHFMD 131
Query: 131 KAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGG 190
AA +GN +E + +A+LLQG+RIA+PAA L VP SAV LN MP+WL +GM IGG
Sbjct: 132 AAAEKGNMRSMEMWQILAILLQGVRIAIPAAALCFVPASAVTGALNQMPSWLADGMTIGG 191
Query: 191 AMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK--K 248
MV AVGYAMVINMM+T+E WPFFALGF LAAI +LTLIA+G IG+A+A IYL L +
Sbjct: 192 GMVAAVGYAMVINMMSTKETWPFFALGFVLAAIGELTLIALGAIGIALALIYLGLKENGG 251
Query: 249 GGNGGNAAGSADPIGDILEDY 269
G A GS DP+GDIL DY
Sbjct: 252 SNGGNGAGGSGDPLGDILNDY 272
>ref|NP_267863.1| mannose-specific PTS system component IIC [Lactococcus lactis
subsp. lactis Il1403]
gb|AAK05805.1|AE006401_6 mannose-specific PTS system component IIC (EC 2.7.1.69)
[Lactococcus lactis subsp. lactis Il1403]
Length = 270
Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/259 (62%), Positives = 203/259 (78%), Gaps = 8/259 (3%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AGLEGILDQ+Q HQP++AC+LIG+VTGH AG+ILGG+LQ++ALGWAN+GAAVAPDA
Sbjct: 15 AFLAGLEGILDQWQFHQPIIACSLIGIVTGHASAGIILGGSLQLIALGWANVGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIP----LAVAGLFLTMIVRTLSTALVHAGDK 131
ALAS+A++I+MV+S +F +T T +P LA AGL LT +VR LS LVH D+
Sbjct: 75 ALASIASSILMVQSNNFD---LTHIMGTIVPAAILLATAGLVLTTLVRMLSVVLVHQADR 131
Query: 132 AAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGA 191
AA G+++G+E +HFIAL+ QGLRIA+PA LL+ + A+Q L A+P ++ G+ +GG
Sbjct: 132 AAENGSYSGVEMWHFIALICQGLRIAIPAGLLLVISPDAIQKALAAIPPVISGGLAVGGG 191
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
MVVAVGYAMVIN+MATREVWPFF LGFALA IS+LTLIA GV+GV IA +YLNL GG+
Sbjct: 192 MVVAVGYAMVINLMATREVWPFFFLGFALAPISELTLIATGVLGVVIAIVYLNLQASGGS 251
Query: 252 G-GNAAGSADPIGDILEDY 269
G G A+ S DPIGDIL DY
Sbjct: 252 GNGTASSSGDPIGDILNDY 270
>ref|YP_804990.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
gb|ABJ68548.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
Length = 268
Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 211/264 (79%), Gaps = 2/264 (0%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILVVI+AF AG+EGILDQF HQP++ACTLIGLVTG+L +ILGG+LQM+ALGWAN
Sbjct: 6 IQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIALGWAN 65
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
+GAAVAPDAALASVA+AII+V G + G++ A + A+PLAVAGL LT+I RTL+T +V
Sbjct: 66 VGAAVAPDAALASVASAIILVLGGQ-GKAGVSSAIALAVPLAVAGLLLTIIARTLATLIV 124
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D AA EG+F +E +H++A+ +QGLRIA+PA L++A+ V+S+L AMP WL +G+
Sbjct: 125 HVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGLILAIGAGPVRSLLAAMPAWLTDGL 184
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
+GG MVVAVGYAMVINMMAT+EVWPFFALGF LA I LTLIA+G IG+A+A IYL LS
Sbjct: 185 SVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIYLTLS 244
Query: 247 K-KGGNGGNAAGSADPIGDILEDY 269
K G + G +GS DP+GDI++ Y
Sbjct: 245 KMGGSSNGGNSGSGDPLGDIIDKY 268
>ref|ZP_02427140.1| hypothetical protein CLORAM_00517 [Clostridium ramosum DSM 1402]
gb|EDS19642.1| hypothetical protein CLORAM_00517 [Clostridium ramosum DSM 1402]
Length = 271
Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/255 (65%), Positives = 198/255 (77%), Gaps = 5/255 (1%)
Query: 20 GLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALAS 79
G+EGILD+FQ HQPLVACTLIGLV+GHL G+ILGG+LQM+ALGWAN+GAAVAPDAALAS
Sbjct: 17 GMEGILDEFQFHQPLVACTLIGLVSGHLTEGIILGGSLQMIALGWANVGAAVAPDAALAS 76
Query: 80 VAAAIIMVK--SGDFT--QKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
VA++IIMV G T Q I+ A + AIPL+VAGLFLTMI RTL+ +VH D AA +
Sbjct: 77 VASSIIMVLGLEGGATDVQTAISTAIAVAIPLSVAGLFLTMICRTLTIPIVHFMDGAAEQ 136
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN I+ + +A+LLQG+RIA+PAA L VP + V LN MP WL+ GM +GG MV A
Sbjct: 137 GNMRAIDMWQILAILLQGIRIAIPAAALCVVPAAVVTDALNQMPPWLSGGMTVGGGMVAA 196
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK-KGGNGGN 254
VGYAMVINMM+T+E WPFFALGF LAAI +LTLIA+G IGVA+A IYL L + G NGG
Sbjct: 197 VGYAMVINMMSTKETWPFFALGFVLAAIGELTLIALGAIGVALAIIYLGLKENSGSNGGG 256
Query: 255 AAGSADPIGDILEDY 269
+ GS DP+GDIL DY
Sbjct: 257 STGSGDPLGDILNDY 271
>ref|YP_534991.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
gb|ABD98908.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
Length = 269
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 200/269 (74%), Gaps = 5/269 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILVVI+AF G + DQ + +QP+VAC+LIGLVTG LE GV+LGG+LQ++ +G
Sbjct: 1 MSTIQIILVVIVAFIVGCSSVNDQIETYQPVVACSLIGLVTGQLELGVMLGGSLQLITMG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WAN+GAA+APDAALA VA+AII+++ G+ +GI A + A+PLAVAGL LTMIVRT +
Sbjct: 61 WANVGAAMAPDAALAGVASAIILIE-GNQGAQGIGPAIALAVPLAVAGLGLTMIVRTATV 119
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
+ H DK A + + GI+ +HFI + LQGLR+A+PA LL+ +P S V+ L AMP WL
Sbjct: 120 FIAHIMDKRAEKTDINGIQAWHFIGMTLQGLRVAIPALLLMLIPVSLVRQGLEAMPEWLT 179
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
GM IGG MVVAVGYAMVINMM++REVWPFF LGFALAAI QLTLI++G+IGV +A ++L
Sbjct: 180 AGMTIGGGMVVAVGYAMVINMMSSREVWPFFFLGFALAAIKQLTLISLGIIGVCLAILFL 239
Query: 244 NLS----KKGGNGGNAAGSADPIGDILED 268
L G+ + S DP+GDILED
Sbjct: 240 ALEGSGGSSNGSSNGSGDSDDPLGDILED 268
>ref|YP_807983.1| mannose-specific PTS system component IIC [Lactobacillus casei ATCC
334]
gb|AAY63963.1| EIIC [Lactobacillus casei]
gb|ABJ71541.1| mannose-specific PTS system component IIC [Lactobacillus casei ATCC
334]
Length = 271
Score = 264 bits (674), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/270 (59%), Positives = 210/270 (77%), Gaps = 5/270 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++ I ILV+I++F AG+EGILD+F HQP++ACTLIGLVTG+L +ILGG L+M+ALG
Sbjct: 3 LNFIQVILVLIVSFLAGMEGILDEFHFHQPVIACTLIGLVTGNLAPCLILGGQLEMIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G T KGI+ A + A+PLAVAGL LT +VRTL+T
Sbjct: 63 WANIGAAVAPDAALASVASAIILVLGGQGT-KGISSAIAIAVPLAVAGLLLTTLVRTLAT 121
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
A+VH D AA EG+F I+ + +IA+ +QGLRIA+PA L++AV V+++L MP+WL
Sbjct: 122 AIVHFMDAAAEEGSFRKIDMWQWIAICMQGLRIAIPAGLILAVGAGPVRALLERMPDWLT 181
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
G+ IGG MVVAVGYAMVINMMATREVWPFFALGF LA + ++TLI +G IG+++A IYL
Sbjct: 182 AGLGIGGGMVVAVGYAMVINMMATREVWPFFALGFVLATVKEITLIGLGAIGISLALIYL 241
Query: 244 NL----SKKGGNGGNAAGSADPIGDILEDY 269
L G + +G+ DP+GDI+++Y
Sbjct: 242 ALSKMGGGSSKGGSSNSGAGDPVGDIIDNY 271
>ref|YP_695270.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens ATCC 13124]
ref|ZP_02634843.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens B str. ATCC 3626]
gb|ABG82794.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens ATCC 13124]
gb|EDT24783.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens B str. ATCC 3626]
Length = 267
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/254 (66%), Positives = 206/254 (81%), Gaps = 1/254 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+ GILD+FQ HQPLVACTLIGLVTG+L +ILGG+LQM+ALGWANIGAAVAPDA
Sbjct: 15 AFLAGMGGILDEFQFHQPLVACTLIGLVTGNLIPCLILGGSLQMIALGWANIGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVAAAII+V SG+ Q GI+ A + AIPLAVAGL LT+I RT++TA VH D AA E
Sbjct: 75 ALASVAAAIILVLSGE-GQAGISSAIAIAIPLAVAGLLLTIICRTIATAFVHLMDAAAKE 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN +E +HFIA+L+QG+RIA+PAAL++ + + ++L +MP WL +G+ +GG MVVA
Sbjct: 134 GNIRKVEMWHFIAILMQGVRIALPAALILLIGAGPISALLASMPAWLTDGLAVGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNA 255
VGYAMVINMMAT+EVWPFFA+GF LA ISQLTLI +G IGVA+A IYL LSKKGG+G
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATISQLTLIGLGAIGVALALIYLALSKKGGSGNGG 253
Query: 256 AGSADPIGDILEDY 269
+ DP+GDI++ Y
Sbjct: 254 SNIGDPVGDIIDRY 267
>ref|NP_561738.1| PTS system [Clostridium perfringens str. 13]
ref|ZP_02638167.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens CPE str. F4969]
ref|ZP_02641927.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens NCTC 8239]
ref|ZP_02863624.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens C str. JGS1495]
ref|ZP_02953364.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens D str. JGS1721]
dbj|BAB80528.1| PTS system [Clostridium perfringens str. 13]
gb|EDS81411.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens C str. JGS1495]
gb|EDT28291.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens CPE str. F4969]
gb|EDT71617.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens D str. JGS1721]
gb|EDT79301.1| PTS system, mannose/fructose/sorbose family, IIC component
[Clostridium perfringens NCTC 8239]
Length = 267
Score = 260 bits (665), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 167/254 (65%), Positives = 205/254 (80%), Gaps = 1/254 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+ GILD+FQ HQPLVACTLIGLVTG+L +ILGG+LQM+ALGWANIGAAVAPDA
Sbjct: 15 AFLAGMGGILDEFQFHQPLVACTLIGLVTGNLIPCLILGGSLQMIALGWANIGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALASVAAAII+V SG+ Q GI+ A + AIPLAVAGL LT+I RT++TA VH D AA E
Sbjct: 75 ALASVAAAIILVLSGE-GQAGISSAIAIAIPLAVAGLLLTIICRTIATAFVHLMDAAAKE 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN +E +HFIA+L+QG+RIA+PAAL++ + + ++L +MP WL +G+ +GG MVVA
Sbjct: 134 GNIRKVEMWHFIAILMQGVRIALPAALILLIGAGPISALLASMPAWLTDGLAVGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNA 255
VGYAMVINMMAT+EVWPFFA+GF LA I QLTLI +G IGVA+A IYL LSKKGG+G
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATIPQLTLIGLGAIGVALALIYLALSKKGGSGNGG 253
Query: 256 AGSADPIGDILEDY 269
+ DP+GDI++ Y
Sbjct: 254 SNIGDPVGDIIDRY 267
>ref|YP_001307852.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR32896.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 268
Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/255 (61%), Positives = 199/255 (78%), Gaps = 2/255 (0%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
AF AG+EGILD+FQ HQP++ACTLIGLVTG+L +ILGGTLQM+ALGWANIGAAVAPDA
Sbjct: 15 AFLAGVEGILDEFQFHQPIIACTLIGLVTGNLLPCLILGGTLQMIALGWANIGAAVAPDA 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
ALA+VA+AII+V G + G+ A + A+PLAVAGL LT+I RTL+TA VH D AA E
Sbjct: 75 ALAAVASAIILVLGGQ-GEAGVASAIAIAVPLAVAGLLLTIICRTLATAFVHFMDAAAKE 133
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN I+ + A+ LQG+RIA+PAAL++A+ + S+L AMP WL G+ IGG MVVA
Sbjct: 134 GNLRAIDMWQIAAICLQGIRIAIPAALVLAIGAGPISSLLAAMPTWLTGGLAIGGGMVVA 193
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK-GGNGGN 254
VGYAMVINMMAT+EVWPFFA+GF LA +SQ+TLI +G IGVA+A +YL LSK+ G G
Sbjct: 194 VGYAMVINMMATKEVWPFFAIGFVLATVSQITLIGLGAIGVALALLYLALSKQGGSGNGG 253
Query: 255 AAGSADPIGDILEDY 269
+ + DP+GD+++ Y
Sbjct: 254 NSNTGDPLGDLIDRY 268
>ref|NP_149231.1| Mannose/fructose-specific phosphotransferase system component IIC
[Clostridium acetobutylicum ATCC 824]
gb|AAK76813.1|AE001438_66 Mannose/fructose-specific phosphotransferase system component IIC
[Clostridium acetobutylicum ATCC 824]
Length = 268
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 194/267 (72%), Gaps = 2/267 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++II LVVI+AF AG+EGILD+F HQP++ACTLIGLVTG+L +ILGGTLQM+ALG
Sbjct: 3 LNIIQMGLVVIVAFLAGMEGILDEFHFHQPVIACTLIGLVTGNLVPCLILGGTLQMIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G + G++ A + A+PLAVAGL L I RT+
Sbjct: 63 WANIGAAVAPDAALASVASAIILVLGGQ-GKAGVSSAIAIAVPLAVAGLLLQTICRTIGI 121
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
++H D AA EGN IE +H IA+ +QG+RIA+PAAL++A+ ++S+L AMP WL
Sbjct: 122 IIIHRMDAAAEEGNIRKIEMWHIIAICMQGVRIAIPAALILAIGAGPIRSLLQAMPLWLT 181
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLT-LIAMGVIGVAIAFIY 242
+G+ IGG MVVAVGYAMVINMMAT+EVWPFFA+GF LA +SQ+T + +
Sbjct: 182 DGLAIGGGMVVAVGYAMVINMMATKEVWPFFAIGFVLATVSQITLIGLGAIGLALALLYL 241
Query: 243 LNLSKKGGNGGNAAGSADPIGDILEDY 269
+ G G + + DP+GDI++ Y
Sbjct: 242 SLSKQGGSGKGGGSNTGDPLGDIIDRY 268
>ref|NP_694296.1| PTS system mannose-specific enzyme II C component [Oceanobacillus
iheyensis HTE831]
dbj|BAC15330.1| PTS system, mannose-specific enzyme II, C component [Oceanobacillus
iheyensis HTE831]
Length = 270
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
Query: 15 IAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPD 74
+AF AG+EGILD+F HQP++ACTLIGLVTG + +ILGGTLQ++ALGWANIGAAVAPD
Sbjct: 16 VAFLAGVEGILDEFHFHQPIIACTLIGLVTGEVVPCLILGGTLQLIALGWANIGAAVAPD 75
Query: 75 AALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAA 134
AALAS+A+AII+V G + G++ A + A+PLAVAGL LT+IVRT++T LVH D AA
Sbjct: 76 AALASIASAIILVLGGQ-GESGVSSAIAIAVPLAVAGLLLTIIVRTIATGLVHLMDAAAK 134
Query: 135 EGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVV 194
EGN I+ +H +A+ +QGLRIA+PAAL++A+ V+ +L +MP+WL +G+ +GG MVV
Sbjct: 135 EGNIRRIDFWHIVAICMQGLRIAIPAALILAIGAGPVRDLLQSMPSWLTDGLAVGGGMVV 194
Query: 195 AVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK-GGNGG 253
AVGYAMVINMMAT+EVWPFFA+GF LA I +TL+ +G IGVA+A IYL L+K+ G G
Sbjct: 195 AVGYAMVINMMATKEVWPFFAIGFVLATIPSITLMGLGGIGVALALIYLALTKQGGSGNG 254
Query: 254 NAAGSADPIGDILEDY 269
+ DP+G+I+++Y
Sbjct: 255 GNGNTGDPLGEIIDNY 270
>ref|ZP_00365567.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Streptococcus pyogenes M49 591]
Length = 145
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/139 (95%), Positives = 137/139 (98%)
Query: 131 KAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGG 190
K AEGNFAGIERFHFIA++LQGLRIAVPAA+LVAVPTSAVQSVLNAMP+WLNEGMQIGG
Sbjct: 7 KLPAEGNFAGIERFHFIAVVLQGLRIAVPAAILVAVPTSAVQSVLNAMPSWLNEGMQIGG 66
Query: 191 AMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 250
AMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG
Sbjct: 67 AMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 126
Query: 251 NGGNAAGSADPIGDILEDY 269
NGGNAAGSADPIGDILEDY
Sbjct: 127 NGGNAAGSADPIGDILEDY 145
>ref|NP_873283.1| mannose-specific phosphotransferase system IIC component
[Haemophilus ducreyi 35000HP]
gb|AAP95672.1| mannose-specific phosphotransferase system IIC component
[Haemophilus ducreyi 35000HP]
Length = 266
Score = 221 bits (563), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 167/248 (67%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV ++A G ILD+FQ H+PL+ACTLIGLV G L G+I+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVACVCGAGSILDEFQTHRPLIACTLIGLVLGDLTTGIIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APD ALASV A I+++ ++ I+ + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDTALASVIATILVIVG----KQDISTGIAVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN A ++ HF ALLLQ +RIA+P AL+VA+ T AVQ +L A+P+
Sbjct: 118 VGFQHAADKSVLDGNLARLDWIHFTALLLQAMRIAIP-ALIVALTAGTDAVQMMLQAIPD 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVVAAFTDFNLVALGVLGTIMAV 236
Query: 241 IYLNLSKK 248
IY+ + K
Sbjct: 237 IYIQIHPK 244
>ref|ZP_02438380.1| hypothetical protein CLOSS21_00831 [Clostridium sp. SS2/1]
gb|EDS22625.1| hypothetical protein CLOSS21_00831 [Clostridium sp. SS2/1]
Length = 272
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 165/246 (67%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
IS + +L+V+ AG+ +LD FQ H+PL+ACT++GL+ G ++ G++LGGTL+M+ALG
Sbjct: 3 ISTVQIVLLVVFGCIAGMGSVLDSFQTHRPLIACTVVGLILGDVKTGILLGGTLEMIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAA +PD+ALAS+ + I++V GI + A+P+AVAG LT+ RT++
Sbjct: 63 WMNIGAAQSPDSALASIISTILVVVGHQSVANGI----AIALPVAVAGQVLTVFARTVTI 118
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPT-SAVQSVLNAMPNWL 182
HA DK A + NF ++ H AL++Q LR+A+P L+ AV + VQ++LN++P +
Sbjct: 119 FFQHAADKYAEDANFKMLDICHVAALVVQALRVAIPTFLVAAVVSPEGVQTLLNSIPKVV 178
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G M+V VGYAMV+NMM + + PFF LGF +AA ++ L+A G++G A +Y
Sbjct: 179 TGGLTVAGGMIVVVGYAMVLNMMGAKYLMPFFFLGFVIAAFTEFNLVAFGIMGAVFAIVY 238
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 239 VQLNPK 244
>ref|ZP_02421084.1| hypothetical protein ANACAC_03738 [Anaerostipes caccae DSM 14662]
gb|EDR95708.1| hypothetical protein ANACAC_03738 [Anaerostipes caccae DSM 14662]
Length = 276
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 161/243 (66%), Gaps = 5/243 (2%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I +L+ I++ G+ +LD FQ H+PL+ACTL+G++ G ++ GV+LGGTL+M+ALGW N
Sbjct: 6 IQIVLLFIVSCIVGMGSVLDSFQTHRPLIACTLVGIILGDVKTGVMLGGTLEMIALGWMN 65
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAA +PD+ALASV + I+++ GI + A+P+AVAG LT++ RT++
Sbjct: 66 IGAAQSPDSALASVISTILVIVGNQSVSAGI----AIALPVAVAGQVLTVLARTVTIFFQ 121
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWLNEG 185
HA DK A + NF I+ H AL +Q LR+A+P L+ + V + VQS+LN +P+ + G
Sbjct: 122 HAADKYAEDANFKMIDICHITALAVQALRVAIPCLLVSMVVSPTGVQSMLNMIPDVITTG 181
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ + G +V VGYAMV+NMM + + PFF LGF +AA + L+A G++G+ IY+ L
Sbjct: 182 LSVAGGFIVVVGYAMVLNMMGAKYLMPFFFLGFVIAAFTDFNLVAFGIMGIVFGLIYIQL 241
Query: 246 SKK 248
+ K
Sbjct: 242 NPK 244
>ref|YP_455006.1| PTS system mannose-specific IIC component ManY [Sodalis
glossinidius str. 'morsitans']
dbj|BAE74601.1| PTS system mannose-specific IIC component ManY [Sodalis
glossinidius str. 'morsitans']
Length = 266
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 169/247 (68%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ ++A AG+ ILD+FQ H+PLVACTLIGLV ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFVVACIAGMGSILDEFQFHRPLVACTLIGLVLDDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ GI AIPLA G LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGNQSVGAGIAL----AIPLAATGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA GN + H AL+LQ +RIA+PA ++ V+V T AV ++L+++P
Sbjct: 118 VAFQHAADSAAERGNMTALSWIHVSALVLQAMRIAIPAVIVGVSVGTDAVHNMLSSIPEI 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M++ VGYAMVINMM T + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTNGLNIAGGMIMVVGYAMVINMMRTGYLMPFFYLGFVTAAFTSFNLVALGVIGVVMAIL 237
Query: 242 YLNLSKK 248
Y+ LS +
Sbjct: 238 YIQLSPR 244
>ref|YP_001452737.1| hypothetical protein CKO_01160 [Citrobacter koseri ATCC BAA-895]
gb|ABV12301.1| hypothetical protein CKO_01160 [Citrobacter koseri ATCC BAA-895]
Length = 266
Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/263 (49%), Positives = 177/263 (67%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PLVACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLVACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ +GI + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQGIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAADSGNLTALSWIHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPAQAAGNND 260
>ref|YP_277955.1| PTS family enzyme IIC, mannose-specific [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gb|AAZ41079.1| PTS family enzyme IIC, mannose-specific [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 269
Score = 207 bits (526), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 168/253 (66%), Gaps = 5/253 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + IL+ I + G+ ILD+FQ H+PL+ACTL GL+ G ++ G+I+GGTL+M+AL
Sbjct: 2 EINTLQIILLFITSCVIGMGSILDEFQCHRPLIACTLTGLILGDIKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPD ALAS+ + I+++ Q+ I + AIPLA G LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDTALASIISTILVIMG----QQPIGAGIALAIPLAATGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA N + H AL+LQ +R+++PA ++ V+V T V S+L+A+P
Sbjct: 118 VAFQHAADKAAEHCNMKILSWIHITALMLQAMRVSIPATIVGVSVGTETVHSMLHAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G ++V VGYAMVINMM T + PFF LGF + A + L+A+G+IG+ +A +
Sbjct: 178 ITNGLNIAGGIIVVVGYAMVINMMRTGYLMPFFYLGFVITAFTDFNLVALGIIGIILAIL 237
Query: 242 YLNLSKKGGNGGN 254
Y+ LS + N
Sbjct: 238 YIQLSPRYNQVKN 250
>ref|YP_001335990.1| PTS enzyme IIC, mannose-specific [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gb|ABR77760.1| PTS enzyme IIC, mannose-specific [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 266
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 177/263 (67%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+++ +LV I+A AG+E +LD+FQ H+PL+ACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITLLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGLLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPAQAAGNND 260
>ref|YP_001005152.1| sorbose-specific PTS uptake system component [Yersinia
enterocolitica subsp. enterocolitica 8081]
emb|CAL10914.1| sorbose-specific PTS uptake system component [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 275
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 165/246 (67%), Gaps = 7/246 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ IL+ I + AG+ +LD+FQ H+PL+ACT+ GL+ G + GVILGGTL+++AL
Sbjct: 12 EISLLQIILIFIFSCIAGIGSVLDEFQTHRPLIACTITGLILGDMTTGVILGGTLELIAL 71
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ + I+++ GI + A+P+A AG LT+ RTL+
Sbjct: 72 GWMNVGAAQSPDSALASIISTILVIVGHQNIATGI----AIALPVAAAGQVLTVFARTLT 127
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
A HA D+AA + NFA I+ H ALL+Q +R+A+P L+V++ SA V +LNA+P
Sbjct: 128 VAFQHAADRAAEKANFAMIDFMHVSALLVQAMRVAIP-VLIVSIFVSADTVSHMLNAIPT 186
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G+QI G +V VGYAMV+NMM + + PFF LGF + +L+A G IG+ IA
Sbjct: 187 VVTHGLQIAGGFIVVVGYAMVLNMMGVKYLMPFFFLGFIVGGYLGFSLLAFGGIGLIIAL 246
Query: 241 IYLNLS 246
+Y+ L+
Sbjct: 247 LYIQLN 252
>sp|P37082|PTRC_KLEPN Sorbose permease IIC component (PTS system sorbose-specific EIIC
component) (EIIC-Sor)
emb|CAA46859.1| first subunit of EII-Sor [Klebsiella pneumoniae]
prf||2022173E sorA gene
Length = 266
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 165/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + I + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ GV+LGGTL+++AL
Sbjct: 2 EISTLQIIAIFIFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGVMLGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ + I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----HQSIAIGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F I+ H AL +QGLR+A+P AL+V++ SA V S+L+A+P
Sbjct: 118 VVFQHAADKAAEEARFRTIDLLHVSALGVQGLRVAIP-ALVVSLFVSADMVSSMLSAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF +L+A G +GV IA
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDFSLLAFGGVGVIIAL 236
Query: 241 IYLNLSKK 248
IY+ L+ +
Sbjct: 237 IYIQLNPQ 244
>ref|ZP_02872267.1| PTS system, mannose-specific IIC component [candidate division TM7
single-cell isolate TM7a]
Length = 176
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 135/176 (76%)
Query: 39 LIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGIT 98
L+GL TGH++ ++LGG LQ++ALGWAN+GAAVAPDAALASVA+AII VK+G F G
Sbjct: 1 LVGLATGHMKECIMLGGALQLMALGWANVGAAVAPDAALASVASAIIFVKAGKFDAAGQN 60
Query: 99 FAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAV 158
A TAI LA AGL LTM+VRTLS +VH D+ A +GNF G+E +H +AL QGLRIA+
Sbjct: 61 VAIGTAIALATAGLVLTMVVRTLSVVIVHQADREAEKGNFKGVELWHMVALACQGLRIAI 120
Query: 159 PAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFF 214
PA LL+ +P+ +Q LN++P W +GM IGG VVAVGYAMVIN+MA +EVWPFF
Sbjct: 121 PALLLLFIPSHVIQQALNSLPKWFTDGMTIGGGFVVAVGYAMVINLMANKEVWPFF 176
>ref|YP_405701.1| sorbose-permease PTS system IIC component [Shigella dysenteriae
Sd197]
gb|ABB64210.1| sorbose-permease PTS system IIC component [Shigella dysenteriae
Sd197]
Length = 265
Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 166/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H AL +Q LR+AVP AL+V++ SA V ++LNA+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSALGVQALRVAVP-ALIVSLFVSADMVSNMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
IY+ L+ +
Sbjct: 237 IYIQLNPQ 244
>ref|ZP_00365568.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Streptococcus pyogenes M49 591]
Length = 120
Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 115/120 (95%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML
Sbjct: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
ALGWANIG AVAPDAALASVAAAIIMVK GD TQKGITFAYSTAIPLAVA FLTMIVRT
Sbjct: 61 ALGWANIGGAVAPDAALASVAAAIIMVKGGDSTQKGITFAYSTAIPLAVARFFLTMIVRT 120
>ref|ZP_02353381.1| hypothetical protein Sententeri_26422 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
ref|ZP_02681903.1| hypothetical protein Salmentericaenterica_02460 [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 266
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 176/263 (66%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PL+ACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPATAAGNND 260
>ref|NP_288254.1| PTS enzyme IIC, mannose-specific [Escherichia coli O157:H7 EDL933]
ref|NP_310555.1| mannose-specific PTS enzyme IIC [Escherichia coli O157:H7 str.
Sakai]
ref|NP_416332.1| mannose-specific enzyme IIC component of PTS [Escherichia coli str.
K-12 substr. MG1655]
ref|NP_707304.1| PTS enzyme IIC [Shigella flexneri 2a str. 301]
ref|NP_754118.1| PTS system, mannose-specific IIC component [Escherichia coli
CFT073]
ref|NP_837099.1| PTS enzyme IIC [Shigella flexneri 2a str. 2457T]
ref|YP_310288.1| PTS enzyme IIC, mannose-specific [Shigella sonnei Ss046]
ref|ZP_00713624.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli E110019]
ref|ZP_00725164.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli F11]
ref|ZP_00727342.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli E22]
ref|ZP_00736061.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli 53638]
ref|YP_407687.1| PTS enzyme IIC, mannose-specific [Shigella boydii Sb227]
ref|AP_002437.1| mannose-specific enzyme IIC component of PTS [Escherichia coli
W3110]
ref|YP_541022.1| PTS enzyme IIC, mannose-specific [Escherichia coli UTI89]
ref|YP_669665.1| PTS system, mannose-specific IIC component [Escherichia coli 536]
ref|YP_688909.1| PTS enzyme IIC, mannose-specific [Shigella flexneri 5 str. 8401]
ref|YP_852890.1| mannose-specific enzyme IIC [Escherichia coli APEC O1]
ref|YP_001458602.1| PTS system, mannose-specific IIC component [Escherichia coli HS]
ref|ZP_02742949.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4045]
ref|ZP_02751552.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4206]
ref|ZP_02768617.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4115]
ref|ZP_02774370.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4113]
ref|ZP_02783140.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4401]
ref|ZP_02795803.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4486]
ref|ZP_02799870.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4196]
ref|ZP_02807262.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4076]
ref|ZP_02813243.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC869]
ref|YP_001724791.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Escherichia coli ATCC 8739]
ref|YP_001730793.1| mannose-specific enzyme IIC component of PTS [Escherichia coli str.
K-12 substr. DH10B]
ref|YP_001743428.1| PTS system, mannose-specific IIC component [Escherichia coli
SMS-3-5]
ref|YP_001880615.1| PTS system, mannose-specific IIC component [Shigella boydii CDC
3083-94]
sp|P69801.1|PTNC_ECOLI Mannose permease IIC component (PTS system mannose-specific EIIC
component) (EIIC-Man) (EII-P-Man)
sp|P69803|PTNC_ECO57 Mannose permease IIC component (PTS system mannose-specific EIIC
component) (EIIC-Man) (EII-P-Man)
sp|P69804|PTNC_SHIFL Mannose permease IIC component (PTS system mannose-specific EIIC
component) (EIIC-Man) (EII-P-Man)
sp|P69802|PTNC_ECOL6 Mannose permease IIC component (PTS system mannose-specific EIIC
component) (EIIC-Man) (EII-P-Man)
gb|AAG56807.1|AE005404_10 PTS enzyme IIC, mannose-specific [Escherichia coli O157:H7 EDL933]
gb|AAN80683.1|AE016761_258 PTS system, mannose-specific IIC component [Escherichia coli
CFT073]
gb|AAA24444.1| mannose permease subunit II-P-Man
dbj|BAA15625.1| mannose-specific enzyme IIC component of PTS [Escherichia coli
W3110]
gb|AAC74888.1| mannose-specific enzyme IIC component of PTS [Escherichia coli str.
K-12 substr. MG1655]
dbj|BAB35951.1| mannose-specific PTS enzyme IIC [Escherichia coli O157:H7 str.
Sakai]
gb|AAN43011.1| PTS enzyme IIC [Shigella flexneri 2a str. 301]
gb|AAP16906.1| PTS enzyme IIC [Shigella flexneri 2a str. 2457T]
gb|AAZ88053.1| PTS enzyme IIC, mannose-specific [Shigella sonnei Ss046]
gb|ABB65859.1| PTS enzyme IIC, mannose-specific [Shigella boydii Sb227]
gb|ABE07491.1| PTS enzyme IIC, mannose-specific [Escherichia coli UTI89]
gb|ABG69764.1| PTS system, mannose-specific IIC component [Escherichia coli 536]
gb|ABF03604.1| PTS enzyme IIC, mannose-specific [Shigella flexneri 5 str. 8401]
gb|ABJ01176.1| mannose-specific enzyme IIC [Escherichia coli APEC O1]
gb|ABV06219.1| PTS system, mannose-specific IIC component [Escherichia coli HS]
gb|ACA77464.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Escherichia coli ATCC 8739]
gb|ACB03015.1| mannose-specific enzyme IIC component of PTS [Escherichia coli str.
K-12 substr. DH10B]
gb|ACB19736.1| PTS system, mannose-specific IIC component [Escherichia coli
SMS-3-5]
gb|ACD09803.1| PTS system, mannose-specific IIC component [Shigella boydii CDC
3083-94]
gb|EDU33265.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4196]
Length = 266
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 177/263 (67%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PL+ACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++LNA+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPAQAAGNND 260
>gb|AAF24133.1|AF129168_6 EIIC sorbose-PTS homlog [Lactobacillus casei]
Length = 277
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 163/246 (66%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
IS I IL+ I + G+ +LD+FQ H+PL+AC+++GL+ G + G+ILGGTL+++ALG
Sbjct: 3 ISTIQIILIFIWSSVVGMGSVLDEFQTHRPLIACSIMGLILGDPKTGIILGGTLELIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAA +PD+ALAS + I+++ QKGI + A+P+A AG LT++ RT++
Sbjct: 63 WMNIGAAQSPDSALASTISTILVIVGNQDIQKGI----AIALPVAAAGQVLTVLARTVTV 118
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A HA D+ A + NF I HF AL++Q LR+++P ++ V V ++S+L+A+P +
Sbjct: 119 AFQHAADREAEKANFTAIIWLHFTALIVQALRVSIPTTIVAVFVSPEEIKSMLDALPEVI 178
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAM++NMM+ + + PFF GF L +L+L+A G +G+ A +Y
Sbjct: 179 TGGLAVAGGFIVVVGYAMILNMMSVKYLMPFFYQGFVLGGYLKLSLLAWGAVGLIFAIVY 238
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 239 VQLNPK 244
>ref|YP_001177107.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Enterobacter sp. 638]
gb|ABP61056.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Enterobacter sp. 638]
Length = 266
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 175/263 (66%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PLVACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLVACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQNIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAADSGNLTALSWIHVSSLFLQAMRIAIPAVIVAISVGTSEVQGLLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G A GS D
Sbjct: 238 YIQLSPKYNRVAGAPAQAPGSND 260
>ref|YP_001463119.1| PTS system, mannose-specific IIC component [Escherichia coli
E24377A]
gb|ABV17624.1| PTS system, mannose-specific IIC component [Escherichia coli
E24377A]
Length = 266
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 177/263 (67%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PL+ACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++LNA+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPTQAAGNND 260
>ref|ZP_02960839.1| PTS system, mannose-specific IIC component (Escherichia coli SECEC
SMS-3-5) [Providencia stuartii ATCC 25827]
Length = 266
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 175/247 (70%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+++++ +LV I+A AG+ ILD+FQ H+PLVACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 ELTVVQIVLVFIVACIAGMGSILDEFQFHRPLVACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGG----QNIGAGIAIAIPLAAAGQVLTIIVRTVT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D+AA GN I H ALLLQ +RIA+PA ++ V+V TS V+ +L+++P
Sbjct: 118 VAFQHAADRAAVSGNLTAISWIHVSALLLQAMRIAIPALIVAVSVGTSEVRELLDSIPQV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ +G+ I G M+V VGYAMVINMM + PFF LGF AA ++ L+A+GVIG +A +
Sbjct: 178 VTDGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTEFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|YP_312931.1| putative sorbose-permease PTS system IIC component [Shigella sonnei
Ss046]
gb|AAZ90696.1| putative sorbose-permease PTS system IIC component [Shigella sonnei
Ss046]
Length = 265
Score = 204 bits (518), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 166/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H AL +Q LR+A+P AL+V++ SA V ++LNA+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 237 VYIQLNPQ 244
>ref|YP_001344240.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Actinobacillus succinogenes 130Z]
gb|ABR74305.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Actinobacillus succinogenes 130Z]
Length = 266
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 170/248 (68%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV +++ G ILD+FQ H+PL+ACTLIGLV G +++G+I+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVSCVCGAGSILDEFQTHRPLIACTLIGLVLGDMKSGIIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ ++ I+ + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVISTILVIVG----KQDISTGIAVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN A ++ HF AL+LQ +RIA+P AL+VA+ T VQ++LNA+P
Sbjct: 118 VGFQHAADKSVQDGNLARLDWLHFGALMLQAMRIAIP-ALIVALTAGTDVVQTMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTVMAV 236
Query: 241 IYLNLSKK 248
IY+ + K
Sbjct: 237 IYIQIHPK 244
>ref|YP_001570157.1| hypothetical protein SARI_01109 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gb|ABX21015.1| hypothetical protein SARI_01109 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 266
Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 175/263 (66%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PL+ACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIF 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVTGAPAQAAGTND 260
>ref|NP_290651.1| putative sorbose PTS component [Escherichia coli O157:H7 EDL933]
ref|NP_313027.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. Sakai]
ref|ZP_02739567.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4045]
ref|ZP_02751752.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4206]
ref|ZP_02769319.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4115]
ref|ZP_02775877.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4113]
ref|ZP_02780172.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4401]
ref|ZP_02785867.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4501]
ref|ZP_02791262.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4486]
ref|ZP_02799359.1| PTS system, mannose/fructose/sorbose family, IIC component
[Escherichia coli O157:H7 str. EC4196]
ref|ZP_02805414.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4076]
ref|ZP_02809617.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC869]
ref|ZP_02819443.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC4042]
ref|ZP_02823350.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. EC508]
gb|AAG59216.1|AE005634_6 putative sorbose PTS component [Escherichia coli O157:H7 EDL933]
dbj|BAB38423.1| sorbose-permease PTS system IIC component [Escherichia coli O157:H7
str. Sakai]
gb|EDU33739.1| PTS system, mannose/fructose/sorbose family, IIC component
[Escherichia coli O157:H7 str. EC4196]
Length = 265
Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 166/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H AL +Q LR+A+P AL+V++ SA V ++LNA+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 237 VYIQLNPQ 244
>ref|ZP_00825179.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia mollaretii ATCC 43969]
Length = 265
Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 164/246 (66%), Gaps = 7/246 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ +L+ I A AG+ +LD+FQ H+PL+ACT+ GL+ G + GVILGGTL+++AL
Sbjct: 2 EISLVQIVLIFIFACVAGIGSVLDEFQTHRPLIACTITGLILGDMTTGVILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ + I+++ GI + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISTILVIVGHQNIATGI----AIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA D+AA + NFA I+ H ALL+Q LR+AVP L+V++ SA V +L+A+P
Sbjct: 118 VVFQHAADRAAEKANFAMIDLMHVSALLVQALRVAVP-VLIVSIFVSADTVSHMLSAIPT 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G+QI G +V VGYAMV+NMM + + PFF LGF + +L+A G IG+ IA
Sbjct: 177 VVTHGLQIAGGFIVVVGYAMVLNMMGVKYLMPFFFLGFIVGGYLGFSLLAFGGIGLIIAL 236
Query: 241 IYLNLS 246
+Y+ L+
Sbjct: 237 LYIQLN 242
>ref|YP_001479043.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Serratia
proteamaculans 568]
gb|ABV41915.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Serratia
proteamaculans 568]
Length = 266
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 167/247 (67%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ +LD+FQ H+PLVACTLIG + G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACIAGMGSVLDEFQFHRPLVACTLIGFILGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G GI A A AG LT+IVRTL+
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGGQSVGAGIALAIPL----AAAGQVLTIIVRTLT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H ALLLQ +RIA+PA ++ ++V TS V ++LN++P
Sbjct: 118 VAFQHAADSAAERGSLRAITWLHISALLLQAMRIAIPAVIVAISVGTSGVHALLNSIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|YP_794735.1| mannose-specific PTS system component IIC [Lactobacillus brevis
ATCC 367]
gb|ABJ63704.1| mannose-specific PTS system component IIC [Lactobacillus brevis
ATCC 367]
Length = 261
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 166/258 (64%), Gaps = 4/258 (1%)
Query: 12 VVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAV 71
V++IAF AG+EG++D+++ HQP+VACTL+GL TG+L G+ LG +LQ++ LGW NIGAAV
Sbjct: 6 VLLIAFLAGVEGVIDEWEFHQPIVACTLVGLATGNLVTGIALGASLQLVTLGWMNIGAAV 65
Query: 72 APDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDK 131
APD ALA+V AA + + AIPLA+ G LT +R L LV D
Sbjct: 66 APDPALAAVVAAWWVSGPAHLP---VAMGVIVAIPLALIGQGLTRGLRQLIVPLVRQADV 122
Query: 132 AAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGA 191
AAA GN I+ A++LQGLR+ VP ALL+ VP +Q A+P L G+++
Sbjct: 123 AAANGNLRQIDWLQRGAVVLQGLRVLVPTALLMMVPMQWLQIGYQAIPAVLQGGLRVTAG 182
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK-KGG 250
++V V +A+VINMMATR++WPFF +GFALA S L+L+A+G+IG+ +A IYL L GG
Sbjct: 183 LLVIVSFAVVINMMATRQLWPFFFIGFALATDSHLSLVALGLIGIGLAIIYLRLDHPHGG 242
Query: 251 NGGNAAGSADPIGDILED 268
G + D + L+D
Sbjct: 243 GTGPTSTDEDELDRELDD 260
>ref|YP_001652411.1| PTS system, mannose-specific IIC component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gb|ABY69967.1| PTS system, mannose-specific IIC component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 266
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 173/265 (65%), Gaps = 7/265 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV +++ G ILD+FQ H+PL+ACTLIGLV G ++ GVI+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G + GI + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVISTILVIVGGQDIETGI----AVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN ++ HF AL+LQ +RIA+P AL+VA+ T VQ++LNA+P
Sbjct: 118 VGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIP-ALIVALTAGTDVVQTMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAV 236
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDI 265
+Y+ + K +A+ D+
Sbjct: 237 LYIQIHPKYNKSQQVVVAANQDNDL 261
>ref|ZP_00714620.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B7A]
Length = 247
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PL+ACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++LNA+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|YP_150325.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gb|AAV77013.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
Length = 266
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PL+ACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWINIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|NP_456337.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
ref|NP_460787.1| mannose-specific enzyme IIC [Salmonella typhimurium LT2]
ref|NP_804864.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Typhi Ty2]
ref|YP_216812.1| Sugar Specific PTS family, mannose-specific enzyme IIC [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
ref|YP_001587624.1| hypothetical protein SPAB_01383 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
ref|ZP_02347236.1| hypothetical protein Sentente_23552 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
ref|ZP_02560953.1| hypothetical protein Sente_12096 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
ref|ZP_02568726.1| hypothetical protein Senten_23182 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
ref|ZP_02574871.1| hypothetical protein Sententer_01000029_0100020172 [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
ref|ZP_02648026.1| hypothetical protein Senterenterica_20532 [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
ref|ZP_02654203.1| hypothetical protein Sententeric_24593 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
ref|ZP_02659332.1| hypothetical protein Sententerica_25067 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
ref|ZP_02662956.1| hypothetical protein Senteenterica_17046 [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
ref|ZP_02666357.1| hypothetical protein Senterienterica_07331 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
ref|ZP_02670396.1| hypothetical protein Sentericenterica_00715 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
ref|ZP_02678194.1| hypothetical protein Sentericaenterica_11110 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
ref|ZP_02696606.1| hypothetical protein Saentericaenterica_01175 [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
ref|ZP_02707295.1| hypothetical protein Salmoentericaenterica_26801 [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
ref|ZP_02832582.1| hypothetical protein Salentericaenterica_14451 [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
pir||AG0726 phosphotransferase enzyme II, C component [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gb|AAL20746.1| mannose-specific enzyme IIC [Salmonella typhimurium LT2]
emb|CAD05513.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Typhi]
gb|AAO68713.1| phosphotransferase enzyme II, C component [Salmonella enterica
subsp. enterica serovar Typhi Ty2]
gb|AAX65731.1| Sugar Specific PTS family, mannose-specific enzyme IIC [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gb|ABX66791.1| hypothetical protein SPAB_01383 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 266
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PL+ACTLIG V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + ++++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQ +LNA+P
Sbjct: 118 VAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAIL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|ZP_00923658.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli 101-1]
Length = 252
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PL+ACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++LNA+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|YP_087809.1| hypothetical protein MS0617 [Mannheimia succiniciproducens MBEL55E]
gb|AAU37224.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 266
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 167/248 (67%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV +++ G ILD+FQ H+PL+ACTLIGLV G + G+I+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVSCVCGAGSILDEFQTHRPLIACTLIGLVLGDMTTGIIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G GI + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVISTILVIVGGQDISTGI----AVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN A ++ HF AL+LQ +RIA+P AL+VA+ T VQ++LNA+P
Sbjct: 118 VGFQHAADKSVEDGNLARLDWIHFGALMLQAMRIAIP-ALIVALTAGTDVVQTMLNAIPP 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAV 236
Query: 241 IYLNLSKK 248
IY+ + K
Sbjct: 237 IYIQIHPK 244
>ref|ZP_02904524.1| PTS system, mannose-specific IIC component [Escherichia albertii
TW07627]
gb|EDS89959.1| PTS system, mannose-specific IIC component [Escherichia albertii
TW07627]
Length = 266
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 177/263 (67%), Gaps = 9/263 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PLVACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITALQIVLVFIVACIAGMGSILDEFQFHRPLVACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++L+A+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLSAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVL 237
Query: 242 YLNLSKK----GGNGGNAAGSAD 260
Y+ LS K G AAG+ D
Sbjct: 238 YIQLSPKYNRVAGAPAQAAGNND 260
>ref|YP_001054081.1| mannose permease IIC component [Actinobacillus pleuropneumoniae
L20]
gb|ABN74476.1| mannose permease IIC component [Actinobacillus pleuropneumoniae
L20]
Length = 266
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 172/265 (64%), Gaps = 7/265 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV +++ G ILD+FQ H+PL+ACTLIGLV G ++ GVI+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G GI + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVISTILVIVGGQDIATGI----AVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN ++ HF AL+LQ +RIA+P AL+VA+ T VQ++LNA+P
Sbjct: 118 VGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIP-ALIVALTAGTDVVQTMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAV 236
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDI 265
+Y+ + K +A+ D+
Sbjct: 237 LYIQIHPKYNKSQQVVVAANQDNDL 261
>ref|YP_001437528.1| hypothetical protein ESA_01434 [Enterobacter sakazakii ATCC
BAA-894]
gb|ABU76692.1| hypothetical protein ESA_01434 [Enterobacter sakazakii ATCC
BAA-894]
Length = 266
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+E +LD+FQ H+PLVACTL+G V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMESVLDEFQFHRPLVACTLVGAVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
HA DKAA GN + H +L LQ +RIA+PA ++ ++V TS VQS+L+A+P
Sbjct: 118 VGFQHAADKAAQNGNLTALSWIHVSSLFLQAMRIAIPAVIVAISVGTSEVQSMLSAIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIG +A +
Sbjct: 178 VTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|NP_929933.1| PTS system, mannose-specific IIC component (EIIC-MAN)
(Mannose-permease IIC component) (Phosphotransferase
enzyme II, C component) (EII-P-MAN) [Photorhabdus
luminescens subsp. laumondii TTO1]
emb|CAE15072.1| PTS system, mannose-specific IIC component (EIIC-MAN)
(Mannose-permease IIC component) (Phosphotransferase
enzyme II, C component) (EII-P-MAN) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 266
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 173/264 (65%), Gaps = 5/264 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+++ L+ I+A AG++ ILD+FQ H+PLVACTLIG++ G + G+I+GGTL+M+AL
Sbjct: 2 EITVVQIALIFIVACIAGMDSILDEFQFHRPLVACTLIGIILGDMTTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALAS+ + I+++ G +GI A A AG LT+IVRT++
Sbjct: 62 GWMNIGAAIAPDAALASIISTILVIAGGRDIGEGIALAIPL----AAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H ALLLQ +RIA+PA ++ ++V T+ VQ +L ++P
Sbjct: 118 VAFQHAADNAAERGSLRAISFIHLSALLLQAMRIAIPALIVALSVGTNEVQQLLASIPKV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ +G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+G+IG+ +A +
Sbjct: 178 VTDGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTDFNLVALGIIGIVMAVL 237
Query: 242 YLNLSKKGGNGGNAAGSADPIGDI 265
Y+ LS K AA D+
Sbjct: 238 YIQLSPKYNKSQVAAAPGHTNNDL 261
>ref|ZP_00135517.2| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 266
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 173/265 (65%), Gaps = 7/265 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV +++ G ILD+FQ H+PL+ACTLIGLV G ++ GVI+GG+L++LAL
Sbjct: 2 EISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G + I + + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVISTILVIVGG----QDIATSIAVAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN ++ HF AL+LQ +RIA+P AL+VA+ T VQ++LNA+P
Sbjct: 118 VGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIP-ALIVALTAGTDVVQTMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAV 236
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDI 265
+Y+ + K +A+ D+
Sbjct: 237 LYIQIHPKYNKSQQVVVAANQDNDL 261
>ref|NP_464309.1| hypothetical protein lmo0782 [Listeria monocytogenes EGD-e]
ref|ZP_00232955.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 1/2a F6854]
ref|ZP_01929416.1| hypothetical protein LMIG_02077 [Listeria monocytogenes FSL N3-165]
ref|ZP_01932158.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes F6900]
ref|ZP_01934995.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J0161]
ref|ZP_01937606.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J2818]
ref|ZP_01940213.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes 10403S]
ref|ZP_02282052.1| hypothetical protein LmonL_06671 [Listeria monocytogenes LO28]
ref|ZP_02308674.1| hypothetical protein LmonocytFSL_05763 [Listeria monocytogenes FSL
J2-003]
emb|CAC98860.1| lmo0782 [Listeria monocytogenes]
gb|EAL07337.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 1/2a F6854]
gb|EBA21005.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J0161]
gb|EBA24398.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes 10403S]
gb|EBA26817.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes J2818]
gb|EBA32480.1| hypothetical protein LMIG_02077 [Listeria monocytogenes FSL N3-165]
gb|EBA35257.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes F6900]
Length = 270
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 175/246 (71%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G + I+ S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGG----QDISVGISLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V TSAV+++LNA+P+ +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTVGTSAVENLLNAIPDVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA +Q L+A+GV+G+ A IY
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTQFNLVALGVLGLVAAIIY 236
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 237 IQLNPK 242
>ref|YP_001882704.1| sorbose-permease PTS system IIC component [Shigella boydii CDC
3083-94]
gb|ACD10418.1| sorbose-permease PTS system IIC component [Shigella boydii CDC
3083-94]
Length = 269
Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 165/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 6 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 65
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 66 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 121
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H A +Q LR+A+P AL+V++ SA V ++L+A+P
Sbjct: 122 VVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIP-ALIVSLFVSADMVSNMLSAIPE 180
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 181 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 240
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 241 VYIQLNPQ 248
>ref|YP_410307.1| putative sorbose-permease PTS system IIC component [Shigella boydii
Sb227]
gb|ABB68479.1| putative sorbose-permease PTS system IIC component [Shigella boydii
Sb227]
Length = 265
Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 165/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H A +Q LR+A+P AL+V++ SA V ++L+A+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIP-ALIVSLFVSADMVSNMLSAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 237 VYIQLNPQ 244
>ref|YP_691386.1| putative sorbose-permease PTS system IIC component [Shigella
flexneri 5 str. 8401]
gb|ABF06081.1| putative sorbose-permease PTS system IIC component [Shigella
flexneri 5 str. 8401]
Length = 265
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 164/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ + I+++ Q+ I + A+P+A AG LT+ R ++
Sbjct: 62 GWMNVGAAQSPDSALASIISTILVIVG----QQSIATGIAIALPVAAAGQVLTVFARIIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H AL +Q LR+A+P AL+V++ SA V ++LNA+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 237 VYIQLNPQ 244
>ref|ZP_00823099.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia bercovieri ATCC 43970]
ref|ZP_00825393.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia mollaretii ATCC 43969]
Length = 265
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 172/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ ILD+FQ H+PLVACTL+GLV G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLVGLVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGG----QDIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H AL LQ +RIA+PA ++ ++V TS VQ +L+++P+
Sbjct: 118 VAFQHAADGAAERGSLRAITWIHISALFLQAMRIAIPALIVALSVGTSEVQMLLSSIPDV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMALL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|ZP_00835476.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia intermedia ATCC 29909]
ref|YP_001006052.1| PTS system, mannose-specific IIC component [Yersinia enterocolitica
subsp. enterocolitica 8081]
emb|CAL11844.1| PTS system, mannose-specific IIC component [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 265
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 172/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ ILD+FQ H+PLVACTL+GLV G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLVGLVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGG----QDIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H AL LQ +RIA+PA ++ ++V TS VQ +L+++P+
Sbjct: 118 VAFQHAADGAAERGSLRAITWIHISALFLQAMRIAIPALIVALSVGTSEVQMLLSSIPDV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMALL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|NP_756835.1| PTS system, mannose-specific IIC component [Escherichia coli
CFT073]
ref|YP_543524.1| PTS system, mannose-specific IIC component [Escherichia coli UTI89]
ref|YP_672086.1| PTS system, sorbose-specific IIC component [Escherichia coli 536]
ref|YP_859609.1| putative sorbose-permease PTS system IIC component SorA
[Escherichia coli APEC O1]
ref|YP_001746406.1| PTS system, mannose/fructose/sorbose family, IIC component
[Escherichia coli SMS-3-5]
gb|AAN83409.1|AE016770_209 PTS system, mannose-specific IIC component [Escherichia coli
CFT073]
gb|ABE09993.1| PTS system, mannose-specific IIC component [Escherichia coli UTI89]
gb|ABG72185.1| PTS system, sorbose-specific IIC component [Escherichia coli 536]
gb|ABJ03485.1| putative sorbose-permease PTS system IIC component SorA
[Escherichia coli APEC O1]
gb|ACB20005.1| PTS system, mannose/fructose/sorbose family, IIC component
[Escherichia coli SMS-3-5]
Length = 265
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 166/248 (66%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + I + + + AG+ +LD+FQ H+PL+ACT+IGL+ G L+ G++LGGTL+++AL
Sbjct: 2 EISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIMLGGTLELIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 62 GWMNVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
HA DKAA E F ++ H AL +Q LR+A+P AL+V++ SA V ++L+A+P
Sbjct: 118 VVFQHAADKAAEEARFRTLDILHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLSAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A
Sbjct: 177 FVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMAL 236
Query: 241 IYLNLSKK 248
+Y+ L+ +
Sbjct: 237 LYIQLNPQ 244
>ref|ZP_00827883.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia frederiksenii ATCC 33641]
Length = 266
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ ILD+FQ H+PLVACTLIGLV G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLIGLVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGG----QDIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H AL LQ +RIA+PA ++ ++V TS VQ +L+++P
Sbjct: 118 VAFQHAADGAAERGSLRAITWIHISALFLQAMRIAIPALIVALSVGTSEVQMLLSSIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|YP_050481.1| PTS system, mannose-specific IIc component [Erwinia carotovora
subsp. atroseptica SCRI1043]
emb|CAG75289.1| PTS system, mannose-specific IIc component [Erwinia carotovora
subsp. atroseptica SCRI1043]
Length = 265
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 172/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A +G+ ILD+FQ H+PLVACTLIG V G L+ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACVSGMGSILDEFQFHRPLVACTLIGAVLGDLKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ +GI + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----GQGIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA GN I H ALLLQ +RIA+PA ++ V+V T V ++LN++P+
Sbjct: 118 VAFQHAADSAAERGNLTAISWIHVSALLLQAMRIAIPAVIVAVSVGTDTVHALLNSIPDV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA ++ L+A+GVIG+ +A +
Sbjct: 178 VTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTEFNLVALGVIGIVMAVL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|ZP_02687310.1| hypothetical protein LmonFSL_04034 [Listeria monocytogenes FSL
J2-071]
Length = 271
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 174/246 (70%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G + I+ S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGG----QDISVGISLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V T AV+++LNA+P+ +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTVGTQAVENLLNAIPDVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA +Q L+A+GV+G+ A IY
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTQFNLVALGVLGLVAAIIY 236
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 237 IQLNPK 242
>ref|YP_848942.1| mannose-specific phosphotransferasesystem component IIC [Listeria
welshimeri serovar 6b str. SLCC5334]
emb|CAK20159.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 270
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 172/246 (69%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G GI S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGGQDISVGI----SLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V T+AV ++LNA+P +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVSALLLQAMRIAIPAIIVAVTVETAAVTNLLNAIPEVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA +Q L+A+GVIG+ A IY
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTQFNLVALGVIGLVAAIIY 236
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 237 IQLNPK 242
>ref|ZP_02284317.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL R2-503]
Length = 270
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 179/264 (67%), Gaps = 15/264 (5%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G + I+ S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGG----QDISVGISLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V T AV+++LNA+P+ +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTVGTQAVENLLNAIPDVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA + L+A+GV+G+ A IY
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTAFNLVALGVLGLVAAIIY 236
Query: 243 LNLSKK----------GGNGGNAA 256
+ L+ K GG GG +A
Sbjct: 237 IQLNPKYQLKEAIQQYGGGGGRSA 260
>ref|NP_878732.1| phosphotransferase enzyme II, C component [Candidatus Blochmannia
floridanus]
emb|CAD83508.1| phosphotransferase enzyme II, C component [Candidatus Blochmannia
floridanus]
Length = 271
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 161/247 (65%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + I + +++ G+ ILD+FQ H+PL+ACT+IGL+ G ++ G+I+GGTL+M+AL
Sbjct: 2 EINTLQIISLFVVSCIVGMASILDEFQCHRPLIACTMIGLILGDIKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ A I+++ GI AIPLA G LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIIATILVIAGKQPIGAGIAL----AIPLAATGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A H D A N + H AL+LQ +R+A+P+ ++ ++V T + LN++P
Sbjct: 118 VAFQHLADTVAERCNLTALSLIHIAALILQAMRVAIPSTIVGISVGTEIIHQSLNSIPEI 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF + A + L+A+G+IG+ +A +
Sbjct: 178 ITNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVITAFTNFNLVALGIIGIVMAIL 237
Query: 242 YLNLSKK 248
Y+ LS K
Sbjct: 238 YIQLSPK 244
>ref|NP_470117.1| hypothetical protein lin0775 [Listeria innocua Clip11262]
emb|CAC96007.1| lin0775 [Listeria innocua]
Length = 271
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 173/246 (70%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G GI S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGGQDISVGI----SLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V TSAV+++LNA+P+ +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTVGTSAVENLLNAIPDVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA + L+A+GV+G+ A +Y
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTAFNLVALGVLGLVAAIVY 236
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 237 IQLNPK 242
>ref|NP_405326.1| PTS system, mannose-specific IIC component [Yersinia pestis CO92]
ref|YP_070160.1| PTS system, mannose-specific IIC component [Yersinia
pseudotuberculosis IP 32953]
ref|YP_651041.1| PTS system, mannose-specific IIC component [Yersinia pestis
Antiqua]
ref|YP_648294.1| PTS system, mannose-specific IIC component [Yersinia pestis
Nepal516]
ref|YP_001162729.1| PTS system, mannose-specific IIC component [Yersinia pestis
Pestoides F]
ref|ZP_01888327.1| PTS system, mannose-specific IIC component [Yersinia pestis
CA88-4125]
ref|YP_001401338.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pseudotuberculosis IP 31758]
ref|YP_001606153.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis Angola]
ref|ZP_02223824.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. F1991016]
ref|ZP_02227268.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. IP275]
ref|ZP_02231832.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. E1979001]
ref|ZP_02236825.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. B42003004]
ref|ZP_02307644.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. UG05-0454]
ref|ZP_02311991.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. MG05-1020]
ref|ZP_02317557.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Mediaevalis str. K1973002]
ref|YP_001721195.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Yersinia
pseudotuberculosis YPIII]
ref|YP_001872180.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Yersinia
pseudotuberculosis PB1/+]
emb|CAH20872.1| PTS system, mannose-specific IIC component [Yersinia
pseudotuberculosis IP 32953]
gb|ABG18694.1| PTS system, mannose-specific IIC component [Yersinia pestis
Nepal516]
gb|ABG13096.1| PTS system, mannose-specific IIC component [Yersinia pestis
Antiqua]
emb|CAL20399.1| PTS system, mannose-specific IIC component [Yersinia pestis CO92]
gb|ABP39756.1| PTS system, mannose-specific IIC component [Yersinia pestis
Pestoides F]
gb|EDM42779.1| PTS system, mannose-specific IIC component [Yersinia pestis
CA88-4125]
gb|ABS49191.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pseudotuberculosis IP 31758]
gb|ABX88575.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis Angola]
gb|EDR31949.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. IP275]
gb|EDR37350.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. F1991016]
gb|EDR42579.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. E1979001]
gb|EDR52450.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. B42003004]
gb|EDR57954.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Orientalis str. MG05-1020]
gb|EDR59852.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Antiqua str. UG05-0454]
gb|EDR65000.1| PTS system, mannose/fructose/sorbose family, IIC component
[Yersinia pestis biovar Mediaevalis str. K1973002]
gb|ACA68742.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Yersinia
pseudotuberculosis YPIII]
gb|ACC88723.1| PTS system, mannose/fructose/sorbose family, IIC subunit [Yersinia
pseudotuberculosis PB1/+]
Length = 265
Score = 196 bits (499), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ ILD+FQ H+PLVACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLVGMVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAGG----QDIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H AL LQ +RIA+PA ++ ++V TS VQ +L+++P
Sbjct: 118 VAFQHAADGAAERGSLRAITWLHISALFLQAMRIAIPALIVALSVGTSEVQMMLSSIPEV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 178 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMAVL 237
Query: 242 YLNLSKK 248
Y+ +S K
Sbjct: 238 YIQVSPK 244
>ref|NP_669856.1| PTS enzyme IIC, mannose-specific [Yersinia pestis KIM]
ref|NP_992990.1| PTS system, mannose-specific IIC component [Yersinia pestis biovar
Microtus str. 91001]
gb|AAM86107.1|AE013857_6 PTS enzyme IIC, mannose-specific [Yersinia pestis KIM]
gb|AAS61867.1| PTS system, mannose-specific IIC component [Yersinia pestis biovar
Microtus str. 91001]
Length = 279
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +L+ I+A AG+ ILD+FQ H+PLVACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 16 EITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLVGMVLGDMKTGIIIGGTLEMIAL 75
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ G + I + AIPLA AG LT+IVRT++
Sbjct: 76 GWMNIGAAVAPDAALASIISTILVIAGG----QDIGAGIALAIPLAAAGQVLTIIVRTIT 131
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA D AA G+ I H AL LQ +RIA+PA ++ ++V TS VQ +L+++P
Sbjct: 132 VAFQHAADGAAERGSLRAITWLHISALFLQAMRIAIPALIVALSVGTSEVQMMLSSIPEV 191
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V VGYAMVINMM + PFF LGF AA + L+A+GVIGV +A +
Sbjct: 192 VTSGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGVVMAVL 251
Query: 242 YLNLSKK 248
Y+ +S K
Sbjct: 252 YIQVSPK 258
>ref|YP_013403.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b F2365]
ref|ZP_00229528.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b H7858]
ref|ZP_01926727.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL N1-017]
ref|ZP_01943294.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes HPB2262]
ref|ZP_02276693.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL J1-194]
ref|ZP_02286638.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL J1-175]
ref|ZP_02319690.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL J2-064]
gb|AAT03580.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b F2365]
gb|EAL10788.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes str. 4b H7858]
gb|EBA29591.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes FSL N1-017]
gb|EBA37491.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria monocytogenes HPB2262]
Length = 271
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 173/246 (70%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I ILV +++ +G+ ILD++Q H+PL+ACTLIGLV G + G+I+GGTL+M+ALG
Sbjct: 1 MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDITTGIIIGGTLEMIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W NIGAAVAPDAALAS+ + I+++ G + I+ S AIPLA G LT++VRT++
Sbjct: 61 WMNIGAAVAPDAALASIISTILVITGG----QDISVGISLAIPLAALGQVLTILVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
A H DKA EGN ++ H ALLLQ +RIA+PA ++ V V T AV+++LNA+P+ +
Sbjct: 117 AFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTVGTQAVENLLNAIPDVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+ + G +V VGYAMVINMM+ + + PFF LGF +AA + L+A+GV+G+ A IY
Sbjct: 177 VNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFTAFNLVALGVLGLVAAIIY 236
Query: 243 LNLSKK 248
+ L+ K
Sbjct: 237 IQLNPK 242
>ref|YP_001338026.1| PTS enzyme IIC, mannose-specific [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gb|ABR79759.1| PTS enzyme IIC, mannose-specific [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 247
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 153/227 (67%), Gaps = 7/227 (3%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+LD+FQ H+PL+ACT+IGL+ G L+ GV+LGGTL+++ALGW N+GAA +PD+ALAS+ +A
Sbjct: 4 VLDEFQTHRPLIACTVIGLILGDLKTGVMLGGTLELIALGWMNVGAAQSPDSALASIISA 63
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
I+++ GI + A+P+A AG LT+ RT++ HA DKAA E F I+
Sbjct: 64 ILVIVGHQSIATGI----AIALPVAAAGQVLTVFARTITVVFQHAADKAAEEARFRTIDL 119
Query: 144 FHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLNEGMQIGGAMVVAVGYAMV 201
H AL +Q LR+A+P AL+V++ SA V S+L+A+P ++ G+QI G +V VGYAMV
Sbjct: 120 LHVSALGVQALRVAIP-ALVVSLFVSADMVSSMLSAIPEFVTRGLQIAGGFIVVVGYAMV 178
Query: 202 INMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
+ MM + + PFF LGF +L+A G +GV IA IY+ L+ +
Sbjct: 179 LRMMGVKYLMPFFFLGFLAGGYLDFSLLAFGGVGVIIALIYIQLNPQ 225
>ref|YP_089570.1| hypothetical protein MS2378 [Mannheimia succiniciproducens MBEL55E]
gb|AAU38985.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 266
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 163/246 (66%), Gaps = 5/246 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++ + ILV ++A G+ +LD+ Q H+PLVACTLIGLV G L+ G+I+GGTL+MLALG
Sbjct: 1 MTTMEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGLVLGDLQTGIIVGGTLEMLALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+GAA+APDAALASV AAI+++K G KG A + + A AG LT+ VRTL+
Sbjct: 61 WMNVGAAMAPDAALASVIAAILVIKGGQ--DKGTAIAIAIPV--AAAGQVLTIFVRTLTI 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPA-ALLVAVPTSAVQSVLNAMPNWL 182
L H D AA+ NF GIE HF L LQ LR+AVP A+ + T V + LNA+P +
Sbjct: 117 FLQHKADDYAAQANFRGIEFCHFAGLSLQALRVAVPTLAVALVAGTDTVTAALNAIPEVV 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+QI G +V VGYAMVINMM + PFF +GF +A+ S L+ +G++G +A IY
Sbjct: 177 TRGLQIAGGFIVVVGYAMVINMMRAGALMPFFFIGFVIASFSNYNLVGLGMLGACLALIY 236
Query: 243 LNLSKK 248
+ L+ +
Sbjct: 237 IQLNPR 242
>ref|NP_838873.1| putative sorbose-permease PTS system IIC component [Shigella
flexneri 2a str. 2457T]
ref|NP_709808.2| putative sorbose-permease PTS system IIC component [Shigella
flexneri 2a str. 301]
gb|AAP18684.1| putative sorbose-permease PTS system IIC component [Shigella
flexneri 2a str. 2457T]
gb|AAN45515.2| putative sorbose-permease PTS system IIC component [Shigella
flexneri 2a str. 301]
Length = 246
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 154/227 (67%), Gaps = 7/227 (3%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+LD+FQ H+PL+ACT+IGL+ G L+ G+ILGGTL+++AL W N+GAA +PD+ALAS+ +A
Sbjct: 4 VLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIALCWMNVGAAQSPDSALASIISA 63
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
I+++ Q+ I + A+P+A AG LT+ RT++ HA DKAA E F ++
Sbjct: 64 ILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDI 119
Query: 144 FHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLNEGMQIGGAMVVAVGYAMV 201
H AL +Q LR+A+P AL+V++ SA V ++LNA+P ++ G+QI G +V VGYAMV
Sbjct: 120 LHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLNAIPEFVTRGLQIAGGFIVVVGYAMV 178
Query: 202 INMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
+ MM + + PFF LGF L+L+A G +GV +A +Y+ L+ +
Sbjct: 179 LRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMALVYIQLNPQ 225
>ref|YP_079971.1| phosphotransferase system (PTS) fructose-specific enzyme IIC
component [Bacillus licheniformis ATCC 14580]
ref|YP_092392.1| LevF [Bacillus licheniformis ATCC 14580]
gb|AAU24333.1| phosphotransferase system (PTS) fructose-specific enzyme IIC
component [Bacillus licheniformis ATCC 14580]
gb|AAU41699.1| LevF [Bacillus licheniformis DSM 13]
Length = 267
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 164/257 (63%), Gaps = 4/257 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I IL+++IA G+ +LD+ Q H+PL+ACTL+GLV G L+ G+ILGGTL+++ALG
Sbjct: 1 MSTIQIILLLVIAAITGIGSVLDEGQTHRPLIACTLVGLVLGDLKTGIILGGTLELMALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+G A+APD A+ASV + I+++ + +GI A + A +F VRT++
Sbjct: 61 WMNVGLAMAPDTAIASVISTILVITADQGIGEGIAVAVALAAAGQALTIF----VRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
L+H DK A +GNF GIE H A+ Q LR+ +P ++ + SAVQ+ L +P +
Sbjct: 117 FLIHRADKYAKDGNFKGIEIMHITAMAFQALRVMIPTLIVALISVSAVQAFLGNIPEVIT 176
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
+G+QIGG ++V VGYAMVINMM + PFF +GF LAA + L+ G +G+ +AF+Y
Sbjct: 177 KGLQIGGGIIVVVGYAMVINMMNIPYLKPFFYIGFLLAAFTDFNLVGFGALGLCLAFLYQ 236
Query: 244 NLSKKGGNGGNAAGSAD 260
+ +K G A ++D
Sbjct: 237 QVMQKNHAQGAVAAASD 253
>ref|YP_001652690.1| PTS system, mannose-specific IIC component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gb|ABY70246.1| PTS system, mannose-specific IIC component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 264
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 163/259 (62%), Gaps = 5/259 (1%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILV ++A G+ +LD+ Q H+PLVACTLIG V G L+ G+I+GGTL+MLALGW N
Sbjct: 4 IEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALGWMN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
+GAA+APDAALASV AAI+++K G KG A + +A AG LT+ VRTL+ L
Sbjct: 64 VGAAMAPDAALASVIAAILVIKGGQ--DKGTAIAIAIP--VAAAGQVLTIFVRTLTIFLQ 119
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP-TSAVQSVLNAMPNWLNEG 185
H DK A + NF GIE HF L LQ LR+A+P + V T AV LNA+P + G
Sbjct: 120 HKADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAGTDAVTEALNAIPEVITRG 179
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+Q+ G +V VGYAMVINMM + PFF +GF +A+ S L+ +G +G +A +Y+ L
Sbjct: 180 LQVAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQL 239
Query: 246 SKKGGNGGNAAGSADPIGD 264
+ + +A + + D
Sbjct: 240 NPQFNQSVSAPRTTKKLAD 258
>ref|ZP_00724923.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli F11]
Length = 246
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 155/227 (68%), Gaps = 7/227 (3%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+LD+FQ H+PL+ACT+IGL+ G L+ G++LGGTL+++ALGW N+GAA +PD+ALAS+ +A
Sbjct: 4 VLDEFQTHRPLIACTVIGLILGDLKTGIMLGGTLELIALGWMNVGAAQSPDSALASIISA 63
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
I+++ Q+ I + A+P+A AG LT+ RT++ HA DKAA E F ++
Sbjct: 64 ILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDI 119
Query: 144 FHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLNEGMQIGGAMVVAVGYAMV 201
H AL +Q LR+A+P AL+V++ SA V ++L+A+P ++ G+QI G +V VGYAMV
Sbjct: 120 LHVSALGVQALRVAIP-ALIVSLFVSADMVSNMLSAIPEFVTRGLQIAGGFIVVVGYAMV 178
Query: 202 INMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
+ MM + + PFF LGF L+L+A G +GV +A +Y+ L+ +
Sbjct: 179 LRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMALLYIQLNPQ 225
>ref|ZP_00134534.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
ref|YP_001054350.1| mannose permease IIC component [Actinobacillus pleuropneumoniae
L20]
gb|ABN74745.1| mannose permease IIC component [Actinobacillus pleuropneumoniae
L20]
Length = 264
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 162/259 (62%), Gaps = 5/259 (1%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
I ILV ++A G+ +LD+ Q H+PLVACTLIG V G L+ G+I+GGTL+MLALGW N
Sbjct: 4 IEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALGWMN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
+GAA+APDAALASV AAI+++K G KG A + +A AG LT+ VRTL+ L
Sbjct: 64 VGAAMAPDAALASVIAAILVIKGGQ--DKGTAIAIAIP--VAAAGQVLTIFVRTLTIFLQ 119
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP-TSAVQSVLNAMPNWLNEG 185
H DK A + NF GIE HF L LQ LR+A+P + V T V LNA+P + G
Sbjct: 120 HKADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAGTDTVTEALNAIPEVVTRG 179
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+QI G +V VGYAMVINMM + PFF +GF +A+ S L+ +G +G +A +Y+ L
Sbjct: 180 LQIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQL 239
Query: 246 SKKGGNGGNAAGSADPIGD 264
+ + +A + + D
Sbjct: 240 NPQFNQSVSAPRTTKKLAD 258
>ref|ZP_00835104.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia intermedia ATCC 29909]
Length = 246
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 151/225 (67%), Gaps = 7/225 (3%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+LD+FQ H+PL+ACT+ GL+ G + GVILGGTL+++ALGW N+GAA +PD+ALAS+ +
Sbjct: 4 VLDEFQTHRPLIACTITGLILGDMTTGVILGGTLELIALGWMNVGAAQSPDSALASIIST 63
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
I+++ GI + A+P+A AG LT+ RT++ HA D+AA + NFA I+
Sbjct: 64 ILVIVGHQNIATGI----AIALPVAAAGQVLTVFARTITVVFQHAADRAAEKANFAMIDL 119
Query: 144 FHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLNEGMQIGGAMVVAVGYAMV 201
H ALL+Q LR+A+P L+V++ SA V +L+A+P + G+QI G +V VGYAMV
Sbjct: 120 MHVSALLVQALRVAIP-VLIVSIFVSADTVSHMLSAIPTVVTHGLQISGGFIVVVGYAMV 178
Query: 202 INMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
+NMM + + PFF LGF + +L+A G IG+ IA +Y+ L+
Sbjct: 179 LNMMGVKYLMPFFFLGFIVGGYLGFSLLAFGGIGLIIALLYIQLN 223
>ref|YP_588891.1| PTS system, mannose/fructose/sorbose family, IIC component
[Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gb|ABF14356.1| PTS system, mannose/fructose/sorbose family, IIC component
[Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 266
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 166/248 (66%), Gaps = 5/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + +L+ II AG+E ILD+FQ+H+PL+ CTL+G++ G ++ G+++GG L+M+AL
Sbjct: 2 EISTLQIMLIFIIGCIAGIESILDEFQLHRPLIVCTLVGMILGDIKTGIMIGGVLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDA LA++ AAI+++ + I + AIP+A AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDATLAAIIAAILVIAG----HQHINAGIALAIPIAAAGQILTIIVRTIA 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
HA D+ A GN I H AL+L +RIA+PA ++ ++V T + ++LN++P
Sbjct: 118 IGFQHAADRNAERGNLNAINYIHLSALILHAMRIAIPAVIVSLSVNTETMHTILNSIPAV 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I G M+V +GYAMVINM+ T + PF LGF AA + L ++A+G+ G+ IA +
Sbjct: 178 VTNGLNIVGGMIVVIGYAMVINMIRTGYLMPFLYLGFIAAAFTNLNIVALGITGLMIAIL 237
Query: 242 YLNLSKKG 249
Y L+ K
Sbjct: 238 YSQLNSKN 245
>ref|ZP_00831488.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia frederiksenii ATCC 33641]
Length = 246
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 150/225 (66%), Gaps = 7/225 (3%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+LD+FQ H+PL+ACT+ GL+ G + GVILGGTL+++ALGW N+GAA +PD+ALAS+ +
Sbjct: 4 VLDEFQTHRPLIACTITGLILGDMTTGVILGGTLELIALGWMNVGAAQSPDSALASIIST 63
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
I+++ GI + A+P+A AG LT+ RT++ HA DK A + NFA I+
Sbjct: 64 ILVIVGHQNIATGI----AIALPVAAAGQVLTVFARTITVVFQHAADKYAEKANFAMIDL 119
Query: 144 FHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLNEGMQIGGAMVVAVGYAMV 201
H ALL+Q LR+A+P L+V++ SA V +L+A+P + G+QI G +V VGYAMV
Sbjct: 120 MHVSALLVQALRVAIP-VLIVSIFVSADTVSHMLSAIPTVVTHGLQIAGGFIVVVGYAMV 178
Query: 202 INMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
+NMM + + PFF LGF + +L+A G IG+ IA +Y+ L+
Sbjct: 179 LNMMGVKYLMPFFFLGFIVGGYLGFSLLAFGGIGLIIALLYIQLN 223
>ref|YP_001343600.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Actinobacillus succinogenes 130Z]
gb|ABR73665.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Actinobacillus succinogenes 130Z]
Length = 265
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 165/258 (63%), Gaps = 5/258 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++ + ILV ++A G+ +LD+ Q H+PLVACTLIGLV G L++G+I+GG L+MLALG
Sbjct: 1 MTTLEIILVTLVAAVCGMGSVLDERQTHRPLVACTLIGLVLGDLQSGIIVGGMLEMLALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+GAA+APDAALASV AAI+++K G Q T A + AIP+A AG LT+ VRTL+
Sbjct: 61 WMNVGAAMAPDAALASVIAAILVIKGG---QDKAT-AIAVAIPVAAAGQVLTIFVRTLTI 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP-TSAVQSVLNAMPNWL 182
L H D A + NF GIE HF L LQ LR+A+P + V T V LNA+P +
Sbjct: 117 FLQHKADDYAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAGTDTVTEALNAIPEVV 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+QI G +V VGYAMVINMM + PFF +GF +A+ S L+ +G +G +A IY
Sbjct: 177 TRGLQIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLALIY 236
Query: 243 LNLSKKGGNGGNAAGSAD 260
+ L+ + G+A
Sbjct: 237 IQLNPQFNQSAGQVGNAK 254
>ref|YP_718820.1| protein-N(pi)-phosphohistidine-sugar phosphotransferase
(mannose-specific phosphotransferase system IIC
component) [Haemophilus somnus 129PT]
ref|YP_001784291.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Haemophilus somnus 2336]
gb|ABI24885.1| protein-N(pi)-phosphohistidine-sugar phosphotransferase
(mannose-specific phosphotransferase system IIC
component) [Haemophilus somnus 129PT]
gb|ACA32644.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Haemophilus somnus 2336]
Length = 266
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 169/248 (68%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + +LV I+A +G+ ILD+FQ H+PL+ACTLIGLV G ++ G+I+GG+L++LAL
Sbjct: 2 EISTLQVVLVFIVACISGMGSILDEFQTHRPLIACTLIGLVLGDIKTGIIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G + I+ + AIPLA AG LT +VR L+
Sbjct: 62 GWMNIGAALAPDAALASVVSTILVIVGG----QDISTGIAIAIPLAAAGQVLTYVVRALT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN ++ H ALLLQ +RIA+P AL+VA+ T VQ +LNA+P
Sbjct: 118 VGFQHAADKSIEDGNLTRLDWIHRSALLLQAMRIAIP-ALVVALTAGTDVVQDMLNAIPA 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G ++ VGYAMVINMM + PFF GF +AA + L+A+GV+G +A
Sbjct: 177 VVTNGLKIAGGIIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGAIMAA 236
Query: 241 IYLNLSKK 248
+Y+ L K
Sbjct: 237 LYIQLHPK 244
>gb|EDN74699.1| PTS family mannose porter component IIC [Mannheimia haemolytica
PHL213]
Length = 266
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 175/265 (66%), Gaps = 7/265 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
++S + +L+ ++A +G+ ILD++Q H+PL+ACT+IGLV G + GVI+GG+L++LAL
Sbjct: 2 ELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLGDVTTGVIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ ++ I+ + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAAVAPDAALASIVSTILVIVG----RQDISTGIAIAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DK+ +GN + ++ H ALLLQ +RIA+P AL+VA+ T AVQ++LNA+P
Sbjct: 118 VGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIP-ALIVALTAGTDAVQTMLNAIPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +A + L+A+GV+G IA
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAGFTDFNLVALGVLGTVIAM 236
Query: 241 IYLNLSKKGGNGGNAAGSADPIGDI 265
+Y+++ K +A P D+
Sbjct: 237 VYIHMHPKYNKSQQVVVAAAPKNDL 261
>ref|YP_001311974.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR37018.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 263
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 172/263 (65%), Gaps = 6/263 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S + IL+VI+A G+ +LD+ Q H+P++ACTL+GLV G ++ G+ILGGTL+MLALG
Sbjct: 1 MSTLQLILLVIVAAITGMASVLDEAQFHRPIIACTLVGLVLGDIKTGIILGGTLEMLALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+GAA+APDAALASV +AI+++ ++ I + A+P+A AG LT+ VRT++
Sbjct: 61 WMNVGAAMAPDAALASVISAILVI----IGKQSIGAGIAVAVPIAAAGQVLTIFVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
H DK A +GN GIE H + L LQ +R+A+PAA++ V T AV + L A+P +
Sbjct: 117 FFQHLADKYAEKGNTRGIEMCHILGLSLQAIRVAIPAAIVGVLAGTDAVNAALAAIPQVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+Q+ G +V VGYAMV+NMM ++ + PFF +GF LAA + LI G +GV A +
Sbjct: 177 TRGLQVSGGFIVVVGYAMVMNMMNSKSLLPFFFIGFLLAAFTNFNLIGFGAVGVIAAIFH 236
Query: 243 L-NLSKKGGNGGNAAGSADPIGD 264
+ +++ +G GS D I D
Sbjct: 237 IKSIANEGKVAVAGTGSIDDIDD 259
>ref|ZP_02478695.1| PtnC [Haemophilus parasuis 29755]
gb|EDS24207.1| PtnC [Haemophilus parasuis 29755]
Length = 266
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 168/248 (67%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + ILV ++A +G+ ILD++Q H+PL+ACTLIG+V G ++ G+I+GG+L++LAL
Sbjct: 2 EISTLQIILVFLVACISGMGSILDEWQTHRPLIACTLIGIVLGDMKTGIIVGGSLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ SG + I A + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVVSTILVIVSG----QDIPTAIALAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA DKA G+ ++ H ALLLQ +RIA+P AL+VA+ T +VQS+L A+P
Sbjct: 118 VGFQHAADKAIETGDLNKLDWIHRSALLLQAMRIAIP-ALIVAMTAGTDSVQSMLAAIPP 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA + L+A+GV+G A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTITAI 236
Query: 241 IYLNLSKK 248
IY+ L K
Sbjct: 237 IYIQLHPK 244
>gb|AAB04154.1| EIIC-man [Lactobacillus curvatus]
Length = 270
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 148/224 (66%), Gaps = 4/224 (1%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S I IL++++A G+ +LD+ Q H+PLVACTL+GL+ G L+ G+ILGGTL+M+ALG
Sbjct: 1 MSAIQIILLMVVAAITGIGSVLDEAQTHRPLVACTLVGLILGDLQTGIILGGTLEMMALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+G A+APD A+ASV + I+++ + +G+ + A+PLA AG LT+ VRT++
Sbjct: 61 WMNVGLAMAPDTAIASVISTILVITA----HQGLGEGIAIAVPLAAAGQALTIFVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
VH D A GNF GIER H +AL+ Q LR+ +P ++ + SAV LN +P +
Sbjct: 117 FFVHKADDYAKNGNFKGIERMHILALVFQALRVMIPTLIICLISASAVSHFLNGIPEVIT 176
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLT 227
G+QIGG ++V VGYAMVINMM + PFF +GF AA +
Sbjct: 177 GGLQIGGGIIVVVGYAMVINMMDVPYLKPFFYMGFLFAAFTNFN 220
>ref|NP_245770.1| PtnC [Pasteurella multocida subsp. multocida str. Pm70]
gb|AAK02917.1| PtnC [Pasteurella multocida subsp. multocida str. Pm70]
Length = 267
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 168/248 (67%), Gaps = 7/248 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS + +LV ++A +G+ ILD++Q H+PL+ACTLIGLV G ++ G+I+GGTL++LAL
Sbjct: 2 EISTLQIVLVFLVACVSGMGSILDEWQTHRPLIACTLIGLVLGDIKTGIIVGGTLELLAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAA+APDAALASV + I+++ G + I+ + AIPLA AG LT +VR ++
Sbjct: 62 GWMNIGAALAPDAALASVVSTILVIVGG----QDISTGIAIAIPLAAAGQVLTYVVRAIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP--TSAVQSVLNAMPN 180
HA D G+ ++ H ALLLQ +RIA+P AL+VA+ T VQ++L+A+P+
Sbjct: 118 VGFQHAADNVVESGDLNKLDWIHRSALLLQAMRIAIP-ALIVAMTAGTDTVQTMLSAIPD 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ G++I G + VGYAMVINMM + PFF GF +AA ++ L+A+GV+G +A
Sbjct: 177 VVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTEFNLVALGVLGAIMAV 236
Query: 241 IYLNLSKK 248
+Y+ L K
Sbjct: 237 LYIQLHPK 244
>ref|YP_001310942.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR35986.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 263
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 162/242 (66%), Gaps = 5/242 (2%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S + IL+VI+A G+ +LD+ Q H+P++ACTL+GLV G ++ G+ILGGTL+MLALG
Sbjct: 1 MSTLQLILLVIVAAITGMASVLDEAQFHRPIIACTLVGLVLGDIKTGIILGGTLEMLALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
W N+GAA+APDAALASV +AI+++ ++ I + A+P+A AG LT+ VRT++
Sbjct: 61 WMNVGAAMAPDAALASVISAILVI----IGKQSIGAGIAVAVPIAAAGQVLTIFVRTITV 116
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNWL 182
H DK A +GN GIE H + L LQ +R+A+PAA++ V T AV + L A+P +
Sbjct: 117 FFQHLADKYAEKGNTRGIEMCHILGLSLQAIRVAIPAAIVGVLAGTDAVNAALAAIPQVI 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+Q+ G +V VGYAMV+NMM ++ + PFF +GF LAA + LI G +GV A +
Sbjct: 177 TRGLQVSGGFIVVVGYAMVMNMMNSKSLLPFFFIGFLLAAFTNFNLIGFGAVGVIAAIFH 236
Query: 243 LN 244
+
Sbjct: 237 IK 238
>ref|YP_961836.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Shewanella sp. W3-18-1]
ref|YP_001181747.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Shewanella putrefaciens CN-32]
gb|ABM23282.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Shewanella sp. W3-18-1]
gb|ABP73948.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Shewanella putrefaciens CN-32]
Length = 265
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 161/249 (64%), Gaps = 4/249 (1%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
I +V++A AG+ +LD+ Q H+PLV CTL+G+V G ++ G+ILGGTL+M+ALGW N+G
Sbjct: 7 IALVMVAALAGIGSVLDEAQTHRPLVVCTLVGIVLGDIKTGIILGGTLEMMALGWMNVGL 66
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
A+APD A+ASV + I+++ T +GI + A+ LA AG LT+ +RT++ VH
Sbjct: 67 AMAPDTAIASVISTILVIT----THQGIGQGIAIAVALAAAGQVLTIFIRTIAVFFVHKA 122
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
D A GN GIE H AL LQ LR+A+P ++ + + VQ+VLN++P + +G+QIG
Sbjct: 123 DTYAESGNIRGIEFMHISALSLQALRVALPTLAVLMLDVTTVQNVLNSIPEVVTKGLQIG 182
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
G +VV VGYAMV+NMM R + PF GF +AA + L+ +G +G+ A IYL ++ +
Sbjct: 183 GGIVVVVGYAMVVNMMNVRHLMPFLFAGFLIAAFTNFNLVGLGGMGLVAAIIYLQVNPRF 242
Query: 250 GNGGNAAGS 258
A S
Sbjct: 243 SAASKAVSS 251
>ref|NP_390583.1| phosphotransferase system (PTS) fructose-specific enzyme IIC
component [Bacillus subtilis subsp. subtilis str. 168]
sp|P26381|PTFC_BACSU Fructose permease IIC component (PTS system fructose-specific EIIC
component) (EIIC-Fru) (p28)
emb|CAA39579.1| P28 [Bacillus subtilis]
emb|CAA63463.1| fructose-specific IIC component [Bacillus subtilis]
emb|CAB14647.1| phosphotransferase system (PTS) fructose-specific enzyme IIC
component [Bacillus subtilis subsp. subtilis str. 168]
Length = 269
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 152/241 (63%), Gaps = 4/241 (1%)
Query: 20 GLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALAS 79
G+ +LD+ Q H+PLVACTL+GLV G L+ G+ILGGTL+++ALGW N+G A+APD A+AS
Sbjct: 17 GIASVLDEGQTHRPLVACTLVGLVLGDLKTGIILGGTLELMALGWMNVGLAMAPDTAIAS 76
Query: 80 VAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFA 139
V + I+++ + +GI A + A +F VRT++ +H D+ A GN
Sbjct: 77 VISTILVITADQGIGEGIAVAVALAAAGQALTIF----VRTITVFFIHRADQYAKAGNIK 132
Query: 140 GIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYA 199
GIE H A++ Q LR+ +P ++ + SAVQ+ L +P+ + +G+QIGG ++V VGYA
Sbjct: 133 GIEIMHITAMVFQALRVMIPTLIVALISVSAVQAFLGNIPDVITKGLQIGGGIIVVVGYA 192
Query: 200 MVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSA 259
MVINMM + PFF +GF LAA + L+ G +G+ +A +Y + +K G A ++
Sbjct: 193 MVINMMNIPYLKPFFYIGFLLAAFTDFNLVGFGALGLCLALLYQQVMQKQSAHGAVAAAS 252
Query: 260 D 260
D
Sbjct: 253 D 253
>ref|YP_001310002.1| PTS system mannose/fructose/sorbose family IID component
[Clostridium beijerinckii NCIMB 8052]
gb|ABR35046.1| PTS system mannose/fructose/sorbose family IID component
[Clostridium beijerinckii NCIMB 8052]
Length = 535
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 151/260 (58%), Gaps = 8/260 (3%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+S+ A+L+ + A G+ ++FQ H+PLV TLIG+ G ++ GVI+G ++++ALG
Sbjct: 1 MSLTQALLIFLFASICGIGSASEEFQTHRPLVTATLIGIALGDIKTGVIIGAQVELIALG 60
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR-TLS 122
W IG A PD+ L+S+ A I+ V ++ I A TAIPLAV G L ++ + T+
Sbjct: 61 WMTIGVATPPDSTLSSIVAVILCV----LGKQSIGVAIGTAIPLAVVGQMLFILQKGTID 116
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPN 180
++H ++ +G + HFI + LR+A+P A+LVA+ A + S+LN +P
Sbjct: 117 VGIMHWAERGVDKGELWKVTAAHFITAIPSALRMAIP-AMLVALFADANILNSILNYVPE 175
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
+ +G+Q+ +V VGYAM++ ++ +E+ FF +GF + SQ+TL+ + +G+++A
Sbjct: 176 AITKGLQVSSDFLVVVGYAMILRILNVKEMIAFFLMGFLVMTFSQMTLVGLTFMGISLAL 235
Query: 241 IYLNLSKKGGNGGNAAGSAD 260
IYL +S N +
Sbjct: 236 IYLQISNMIEKASNKTRTKR 255
>ref|ZP_02288400.1| hypothetical protein LmonocyFSL_00767 [Listeria monocytogenes FSL
J1-208]
Length = 126
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 3/125 (2%)
Query: 148 ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMAT 207
A+ +QG+RIA+PAA L+ +P +VQS L AMP WL +GM IGG MVVAVGYA+VINMMAT
Sbjct: 2 AICMQGIRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMAT 61
Query: 208 REVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSA---DPIGD 264
+EVWPFF +GF +AAISQLTLIA+G +GVA+A IYLNLSK GG N G DP+GD
Sbjct: 62 KEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGD 121
Query: 265 ILEDY 269
IL DY
Sbjct: 122 ILNDY 126
>ref|ZP_02339422.1| hypothetical protein Sentent_11256 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 218
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 135/200 (67%), Gaps = 5/200 (2%)
Query: 50 GVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAV 109
G+I+GGTL+M+ALGW NIGAAVAPDAALAS+ + ++++ + I + AIPLA
Sbjct: 1 GIIIGGTLEMIALGWMNIGAAVAPDAALASIISTVLVIAG----HQSIGAGIALAIPLAA 56
Query: 110 AGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPT 168
AG LT+IVRT++ A HA DKAA GN + H +L LQ +RIA+PA ++ ++V T
Sbjct: 57 AGQVLTIIVRTITVAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGT 116
Query: 169 SAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTL 228
S VQ +LNA+P + G+ I G M+V VGYAMVINMM + PFF LGF AA + L
Sbjct: 117 SEVQGMLNAIPEVVTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNL 176
Query: 229 IAMGVIGVAIAFIYLNLSKK 248
+A+GVIG +A +Y+ LS K
Sbjct: 177 VALGVIGAVMAILYIQLSPK 196
>ref|ZP_02789240.1| PTS system, mannose-specific IIC component [Escherichia coli
O157:H7 str. EC4501]
Length = 192
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 136/195 (69%), Gaps = 5/195 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I+ + +LV I+A AG+ ILD+FQ H+PL+ACTL+G+V G ++ G+I+GGTL+M+AL
Sbjct: 2 EITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIAL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
GW NIGAAVAPDAALAS+ + I+++ + I + AIPLA AG LT+IVRT++
Sbjct: 62 GWMNIGAAVAPDAALASIISTILVIAG----HQSIGAGIALAIPLAAAGQVLTIIVRTIT 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL-VAVPTSAVQSVLNAMPNW 181
A HA DKAA GN I H +L LQ +R+A+PA ++ ++V TS VQ++LNA+P
Sbjct: 118 VAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEV 177
Query: 182 LNEGMQIGGAMVVAV 196
+ G+ I G M+V V
Sbjct: 178 VTNGLNIAGGMIVVV 192
>gb|ABK27639.1| putative PTS mannose/fructose-specific IIC component [Lactobacillus
paracasei]
Length = 162
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
++ I ILV+I++F AG+EGILD+F HQP++ACTLIGLVTG+L +ILGG L+M+ALG
Sbjct: 3 LNFIQVILVLIVSFLAGMEGILDEFHFHQPVIACTLIGLVTGNLAPCLILGGQLEMIALG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
WANIGAAVAPDAALASVA+AII+V G T KGI+ A + A+PLAVAGL LT +VRTL+T
Sbjct: 63 WANIGAAVAPDAALASVASAIILVLGGQGT-KGISSAIAIAVPLAVAGLLLTTLVRTLAT 121
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALLLQGLR 155
A+VH D AA EG+F I+ + +IA+ +QG R
Sbjct: 122 AIVHFMDAAAEEGSFRKIDXWQWIAICMQGXR 153
>ref|ZP_02904372.1| fructose permease iic component [Escherichia albertii TW07627]
gb|EDS90144.1| fructose permease iic component [Escherichia albertii TW07627]
Length = 202
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
N+GAA +PD+ALAS+ +AI+++ Q+ I + A+P+A AG LT+ RT++
Sbjct: 2 NVGAAQSPDSALASIISAILVIVG----QQSIATGIAIALPVAAAGQVLTVFARTITVVF 57
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA--VQSVLNAMPNWLN 183
HA DKAA + F I+ H AL +Q LR+A+PA L+V++ SA V ++LNA+P ++
Sbjct: 58 QHAADKAAEDARFRTIDILHVSALGVQALRVAIPA-LIVSLFVSADMVSNMLNAIPEFVT 116
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL 243
G+QI G +V VGYAMV+ MM + + PFF LGF L+L+A G +GV +A +Y+
Sbjct: 117 RGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMALVYI 176
Query: 244 NLSKKGGNGGNAAGSADPIG-DILED 268
L+ + +A P D L+D
Sbjct: 177 QLNPQWRKAEPQTQAASPTALDQLDD 202
>ref|ZP_00603137.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN10544.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 257
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 132/243 (54%), Gaps = 7/243 (2%)
Query: 24 ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAA 83
+L + +PL+ TL+GLV G +E G+I+G +L++++LG NIGAA PD +AS+ A
Sbjct: 21 LLGRMNFERPLIVSTLVGLVLGDMEKGLIVGASLELMSLGLVNIGAAAPPDMNMASIIAT 80
Query: 84 IIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIER 143
+ S + +T AIP++V G L +++RT+ + L H D+ +G F+ R
Sbjct: 81 AFAILSNANAEAALTI----AIPISVLGQILGILMRTILSNLTHVADRFIEQGKFSQARR 136
Query: 144 FHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVI 202
H + L L +P L + T+ V +++A+P WL G+ + ++ A G+A+++
Sbjct: 137 IHILYGSGLYALMYFIPIFLAIYFGTNLVSQIVDAIPEWLTNGLTVASKILPAYGFALLL 196
Query: 203 NMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSADPI 262
M T+++ PF LGF + A S L +I + +AF+ + + K NG DP+
Sbjct: 197 QTMLTKKMVPFLLLGFLITAYSGLGIIGIAAFACIVAFVMVQVQGKNSNGNQ--NEPDPL 254
Query: 263 GDI 265
D+
Sbjct: 255 DDL 257
>ref|ZP_01772197.1| Hypothetical protein COLAER_01199 [Collinsella aerofaciens ATCC
25986]
gb|EBA39613.1| Hypothetical protein COLAER_01199 [Collinsella aerofaciens ATCC
25986]
Length = 264
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 9/266 (3%)
Query: 5 SIISAILVVIIAFFAGLEG-ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+ ISA+LV ++ F + +L + QPLV TL+GL+ G + G+ +G ++++++G
Sbjct: 3 TFISAVLVGLVGVFCMWDSRLLGRLNFEQPLVGATLVGLLLGDVPTGLAVGAAVELVSMG 62
Query: 64 WANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
+GAAV PD L + AA T A + AIP+AV G L ++ R++
Sbjct: 63 LVQVGAAVPPDMVLGGIVAAAFAC----LTDASAETAMTIAIPVAVLGQLLGIVFRSIIA 118
Query: 124 ALVHAGDKAAAEGNFAGIERFHFIALL-LQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
AL H D A G F R H A L + +P L V V T VQ+++N +P WL
Sbjct: 119 ALTHVADSAIDNGKFKTAYRMHICAGSGLYAVMYFLPIFLAVFVGTDLVQAIVNMVPEWL 178
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
+ G+ + ++ A G A+++ MM + + PF +GF LAA L++IA+ +IGV +A ++
Sbjct: 179 STGLNVSTKIMTAYGLALLLTMMIKKGMTPFLFIGFLLAAYLNLSVIAVALIGVCLAVVF 238
Query: 243 LNLSKKGGNGGNAAGSADPIGDILED 268
+ NG +AA D D LED
Sbjct: 239 MGFKF---NGSHAAAGVDSDYDPLED 261
>ref|NP_814322.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAM75282.1|AF454824_78 EF0078 [Enterococcus faecalis]
gb|AAO80393.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 261
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 124/237 (52%), Gaps = 4/237 (1%)
Query: 5 SIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
SI +L+V+ FF E F +QP+ A + GL+ G + G+ +GGTLQ+L+LG
Sbjct: 4 SIFQLVLIVLYGFFINFEKNSTMFGTYQPVTAGFVTGLILGDISTGLFIGGTLQLLSLGI 63
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
+N G A PD AS+ A I + +G GI S IP+A+ + L +I T+
Sbjct: 64 SNFGGASIPDYQTASIVATFITITTGQKPSVGI----SIGIPVALLMVQLDVIRNTIGIW 119
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
+VH + +G+++ I + + L +P AL V S + ++L+ P WL
Sbjct: 120 MVHKAEAGVKKGDYSMITKMQMFGVFLTAATTGIPVALAVIFGPSLINTILSYTPEWLTN 179
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
G+ + G ++ AVG +++ + +E + + +GF +A ++ L+ + ++G AIA I
Sbjct: 180 GLTVAGGLLPAVGIGLLLRYLPAKEYFSYLVIGFVMAVYMKIPLLGVALVGAAIALI 236
>ref|YP_001089584.1| PTS system, IIc component [Clostridium difficile 630]
ref|ZP_01802530.1| hypothetical protein CdifQ_04003512 [Clostridium difficile
QCD-32g58]
ref|ZP_02729651.1| PTS system, IIc component [Clostridium difficile QCD-37x79]
ref|ZP_02744236.1| PTS system, IIc component [Clostridium difficile QCD-63q42]
ref|ZP_02755810.1| PTS system, IIc component [Clostridium difficile QCD-76w55]
ref|ZP_02762535.1| PTS system, IIc component [Clostridium difficile QCD-97b34]
emb|CAJ69962.1| PTS system, IIc component [Clostridium difficile 630]
Length = 259
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 9/259 (3%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
+L+V+ FF E F +QP+ A + GL+ G + G+ +GGTLQ+L+LG +N G
Sbjct: 9 LLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGG 68
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
A PD AS+ A I + + GI S IP+A+ + L ++ T+ LVH
Sbjct: 69 ASIPDYQTASIVATFITITTKQEASVGI----SIGIPVALLMVQLDVLRNTIGIWLVHKA 124
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
+ A +GN+ I + +LL +P AL V S + ++L P WL G+ +
Sbjct: 125 EDGAKKGNYKNITYMQMLGVLLTAATTGIPVALSVIFGPSLINTILKYTPEWLTGGLTVA 184
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
G ++ AVG +++ + +E + + +GF LA ++ L+ + +IG AIA I + KK
Sbjct: 185 GGLLPAVGIGLLLRYLPAKEYFSYLVIGFVLAVYMKVPLLGVALIGGAIALI---IYKK- 240
Query: 250 GNGGNAAGSADPIGDILED 268
N N +G + ED
Sbjct: 241 -NLENQEQQYTVVGGMDED 258
>ref|NP_816643.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO82713.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 256
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 136/246 (55%), Gaps = 5/246 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+++ I +L+ +IAFFA + ++P+V L+GL G L+ G+ LG TL+++ +
Sbjct: 2 EVTFIKVLLMFLIAFFAYMHSWFGSTMWNRPIVVAPLVGLALGDLDTGIKLGATLELVFM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT-L 121
G +GA+ PD ++ A ++ SG + I+ A A+P+A L + + T L
Sbjct: 62 GAFPVGASNPPDFVSGTIIATAYVIMSG----QSISSAVVLAVPIATLVLLIDNLQMTFL 117
Query: 122 STALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNW 181
T H DK A GN G+ER IA + + +A+ AL + ++ VL+ +P++
Sbjct: 118 LTGASHLADKEAKRGNIQGVERIQLIAGVGNKVLLALIVALGFYLGVPFIEKVLSYVPDF 177
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ I ++ A+G+AM+ MM T+++ PF LGF AA +++++ + + G+ I +
Sbjct: 178 ITHGLDIAAGIIPAIGFAMLARMMVTKKMIPFLLLGFLFAAYLKISVVGIALFGIVIVLL 237
Query: 242 YLNLSK 247
Y+N+S
Sbjct: 238 YMNMSD 243
>ref|ZP_00602999.1| PTS system, mannose-specific IIC component [Enterococcus faecium
DO]
gb|EAN10755.1| PTS system, mannose-specific IIC component [Enterococcus faecium
DO]
Length = 98
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 66/76 (86%)
Query: 172 QSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAM 231
QS L +MP WL +GM IGG MVVAVGYA+VINMMAT+EVWPFF +GF +AAISQLTLIA+
Sbjct: 1 QSFLESMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAL 60
Query: 232 GVIGVAIAFIYLNLSK 247
G +GVA+A IYLNLSK
Sbjct: 61 GALGVALALIYLNLSK 76
>ref|ZP_02037957.1| hypothetical protein BACCAP_03576 [Bacteroides capillosus ATCC
29799]
gb|EDM98774.1| hypothetical protein BACCAP_03576 [Bacteroides capillosus ATCC
29799]
Length = 249
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 141/255 (55%), Gaps = 10/255 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
I+ AILV + +A ++ Q Q +P++ ++GL+ G L+ G+I+G T++++ L
Sbjct: 3 IVQAILVGLWVTWAIIDEQTLQLQTTRPIITGVVVGLIMGDLQTGLIVGATVELMFLAVV 62
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR-TLSTA 124
+G AV PD LAS A V +G T+ A +TAIP+A+ G +T + ++ A
Sbjct: 63 FVGTAVPPDPTLASAIATAFAVFAGGNTE----LAVATAIPIALIGQTITTLQYGVVNVA 118
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
++H DKAAA G+ G+ R +++AL L +P L V V+ ++ +P +
Sbjct: 119 ILHWADKAAARGDMRGVRRGNYVALAFNALFYGLPTFLAVYFGAEFVEPLIAMIPEKIIS 178
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLN 244
G+ +GG M+ AVG+ +++ + +++WP+F +G+ A + ++ +G+I VA F++
Sbjct: 179 GLSVGGGMIGAVGFGLLLTTIKVKKLWPYFIIGYIATAFLGINMLGIGLIAVAAVFLHQI 238
Query: 245 LSKKGGNGGNAAGSA 259
+ G AA SA
Sbjct: 239 FT-----GSRAADSA 248
>ref|NP_459567.1| putative inner membrane protein [Salmonella typhimurium LT2]
ref|YP_001571367.1| hypothetical protein SARI_02362 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
ref|ZP_02337758.1| hypothetical protein Sentent_02819 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
ref|ZP_02571671.1| hypothetical protein Sententer_01000003_0100003958 [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
ref|ZP_02665344.1| hypothetical protein Senterienterica_02170 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
ref|ZP_02672532.1| hypothetical protein Sentericenterica_11587 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
ref|ZP_02676656.1| hypothetical protein Sentericaenterica_03355 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
ref|ZP_02682891.1| hypothetical protein Salmentericaenterica_07504 [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
ref|ZP_02830808.1| hypothetical protein Salentericaenterica_05450 [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gb|AAL19526.1| putative inner membrane protein [Salmonella typhimurium LT2]
gb|ABX22225.1| hypothetical protein SARI_02362 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 247
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 143/250 (57%), Gaps = 9/250 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQM-HQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
+++A L+ +IA L+G L M +PLV C L GLV G+L G+++G TL+++ LG
Sbjct: 2 LLTATLLGLIAALGILDGRLLGVSMIDRPLVMCALTGLVCGNLHEGILIGATLELIFLGN 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
IGAAV PD SV A + SG +G A + AIP+++ L ++VR ++
Sbjct: 62 VAIGAAVPPDVVTGSVLATAFSIMSG----RGPEAALTIAIPISMLAQTLGVLVRVVNAR 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFIA-LLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
H D+ AA+GN + H LL L +P + + ++AV L+A+P ++
Sbjct: 118 FGHMADRYAAQGNTRMVAVMHLGGPTLLYFLSGFLPVFFAILLGSAAVTWFLDAIPAFIT 177
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI-- 241
G+ + ++ A+G+A++I+MM + ++ P+ LGF +AA ++L +IA+ + V +AFI
Sbjct: 178 NGLVVASKILPALGFALLISMMLSSKLMPYLGLGFLIAAYTKLDIIAIALFAVVLAFIIS 237
Query: 242 -YLNLSKKGG 250
+LN S++ G
Sbjct: 238 QFLNTSQQEG 247
>ref|ZP_02558636.1| hypothetical protein Sente_00370 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
ref|ZP_02656634.1| hypothetical protein Sententerica_11388 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 247
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 143/250 (57%), Gaps = 9/250 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQM-HQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
+++A L+ +IA L+G L M +PLV C L GLV G+L G+++G TL+++ LG
Sbjct: 2 LLTATLLGLIAALGILDGRLLGVSMIDRPLVMCALTGLVCGNLHEGILIGATLELIFLGN 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
IGAAV PD SV A + SG +G A + AIP+++ L ++VR ++
Sbjct: 62 VAIGAAVPPDVVTGSVLATAFSIMSG----RGPEAALTIAIPISMLAQTLGVLVRVVNAR 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFIA-LLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
H D+ AA+GN + H LL L +P + + ++AV L+A+P ++
Sbjct: 118 FGHMADRYAAQGNTRMVAVMHLGGPTLLYFLSGFLPVFFAILLGSAAVTWFLDAIPAFIT 177
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI-- 241
G+ + ++ A+G+A++I+MM + ++ P+ LGF +AA ++L +IA+ + V +AFI
Sbjct: 178 NGLVVASKILPALGFALLISMMLSSKLIPYLGLGFLIAAYTKLDIIAIALFAVVLAFIIS 237
Query: 242 -YLNLSKKGG 250
+LN S++ G
Sbjct: 238 QFLNTSQQEG 247
>ref|YP_001308105.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR33149.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 263
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 147/261 (56%), Gaps = 14/261 (5%)
Query: 13 VIIAFFAGLEGILD-----QFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
+++ AG+ GILD Q + +P++ L+GL+ G L+ G+I+G L+++ +G A I
Sbjct: 6 IMLGLLAGI-GILDGRIFGQIMLERPIITGALVGLILGDLKTGIIIGAQLELIWMGIAGI 64
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
GAA PD + + SG+ G+ A + A+P+AV L ++VR +++
Sbjct: 65 GAATPPDVVTGGILGTAFAILSGN----GVEVALAIAVPIAVLAQSLGVLVRIINSYFAQ 120
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
A + +F GI +I ++L L +P L + + +AV +++N++P + EG+
Sbjct: 121 RASVYAKKADFRGIAIMMWIPVMLFFLSTFIPTFLAIMLGANAVTALINSIPKIILEGLG 180
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF---IYLN 244
I G+++ AVG+A++++M+ ++++ FF +GF LAA ++L + A+ + G +AF IY+N
Sbjct: 181 IAGSLLPAVGFALLMDMLLSKKMAVFFFIGFLLAAYAKLDITAIALFGACVAFILNIYIN 240
Query: 245 LSKKGGNGGNAAGSADPIGDI 265
+K+ A S G+I
Sbjct: 241 -TKENSTAKQAVASNLTEGEI 260
>ref|ZP_01696042.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Bacillus coagulans 36D1]
gb|EAY44706.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Bacillus coagulans 36D1]
Length = 266
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 144/257 (56%), Gaps = 6/257 (2%)
Query: 6 IISAILVVIIAFFAGLEG-ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
+I A+++ I+A L+G I + +PLV L+GLV G +++G+++G L+++ +G
Sbjct: 2 LIDALMLGIVAGIGILDGRIFGVMMLERPLVTGLLVGLVLGDVKSGIMIGAQLELIWMGI 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
A IGA+ PD V + SG G+ A + A+P+AV L ++VR ++
Sbjct: 62 AGIGASTPPDVVTGGVLGTAFAILSG----HGVAVALALAVPIAVLAQSLGVLVRIMNGY 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
+H DK A + NF G+ ++ +L L + +P L + + V +++NA+P + +
Sbjct: 118 FLHKADKYAEDANFRGVTLMMWVPPILFFLSVFLPTFLAILMGAKEVTALINAVPKTILD 177
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA-FIYL 243
G+ I G ++ A+G+A++++M+ ++++ FF LGF A+ +L + A+ + G +A IY+
Sbjct: 178 GLTIAGNLLPAIGFALLLDMLFSKKMVVFFFLGFLAASYLKLDITAIALFGTCLAIIIYV 237
Query: 244 NLSKKGGNGGNAAGSAD 260
+++ + AG D
Sbjct: 238 VMNRDEKSSNTQAGPND 254
>ref|NP_346576.1| PTS system, IIC component [Streptococcus pneumoniae TIGR4]
ref|NP_359559.1| Phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae R6]
ref|ZP_01408965.1| hypothetical protein SpneT_02000543 [Streptococcus pneumoniae
TIGR4]
ref|YP_817376.1| PTS system, IIC component [Streptococcus pneumoniae D39]
ref|ZP_01820217.1| PTS system, IIC component [Streptococcus pneumoniae SP6-BS73]
ref|ZP_01821760.1| PTS system, IIC component [Streptococcus pneumoniae SP9-BS68]
ref|ZP_01825549.1| PTS system, IIC component [Streptococcus pneumoniae SP11-BS70]
ref|ZP_01827921.1| PTS system, IIC component [Streptococcus pneumoniae SP14-BS69]
ref|ZP_01833174.1| PTS system, IIC component [Streptococcus pneumoniae SP19-BS75]
ref|ZP_01835048.1| PTS system, IIC component [Streptococcus pneumoniae SP23-BS72]
ref|ZP_02708965.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC1873-00]
ref|ZP_02713427.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae SP195]
ref|ZP_02715834.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC0288-04]
ref|ZP_02718225.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC3059-06]
ref|ZP_02721938.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae MLV-016]
ref|YP_001695517.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae Hungary19A-6]
gb|AAK76216.1| PTS system, IIC component [Streptococcus pneumoniae TIGR4]
gb|AAL00770.1| Phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae R6]
gb|ABJ55267.1| PTS system, IIC component [Streptococcus pneumoniae D39]
gb|EDK63089.1| PTS system, IIC component [Streptococcus pneumoniae SP11-BS70]
gb|EDK66008.1| PTS system, IIC component [Streptococcus pneumoniae SP14-BS69]
gb|EDK70914.1| PTS system, IIC component [Streptococcus pneumoniae SP19-BS75]
gb|EDK76689.1| PTS system, IIC component [Streptococcus pneumoniae SP6-BS73]
gb|EDK80046.1| PTS system, IIC component [Streptococcus pneumoniae SP9-BS68]
gb|EDK81733.1| PTS system, IIC component [Streptococcus pneumoniae SP23-BS72]
gb|ACA35803.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae Hungary19A-6]
gb|EDT50746.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC1873-00]
gb|EDT92819.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae SP195]
gb|EDT94492.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC0288-04]
gb|EDT96512.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae CDC3059-06]
gb|EDT98668.1| phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae MLV-016]
Length = 257
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
A+LV ++ A ++ F +H+PLV ++GLV G GV++G L++ LG I
Sbjct: 5 QALLVTLVGIIATIDYNGPLFMIHRPLVTSAMVGLVLGDFTQGVLIGSALELTWLGVTGI 64
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
G PD +++ AII G + +G T + A+P+AVA L ++ +TL V
Sbjct: 65 GGYTPPD----TISGAIIGTAFGILSGQGETAGIAIAVPIAVATQQLDVLAKTLDVYFVK 120
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
D A G+++ I +H+ +L+L L VP L + + V + +P + +G+
Sbjct: 121 KADNDAKNGDYSKIGFYHYSSLVLITLFKIVPIFLAIMLGGEYVADLFAKVPPIVMQGLN 180
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK 247
GA++ ++G+ M++NMM + +W F +GF + ++ I + ++G+A+A+ Y +
Sbjct: 181 SAGALLPSIGFGMLLNMMLKKNMWVFLLIGFICSVYGGMSTIGISLVGIAVAYFYDMIGS 240
Query: 248 K 248
K
Sbjct: 241 K 241
>ref|ZP_00874428.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Streptococcus suis 89/1591]
gb|EAP41390.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Streptococcus suis 89/1591]
Length = 257
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
A+LV ++ A ++ F +H+PLV ++GLV G GV++G L++ LG I
Sbjct: 5 QALLVTLVGIIATIDYNGPLFMIHRPLVTSAMVGLVLGDFTQGVLIGSALELTWLGVTGI 64
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
G PD +++ AII G + +G T + A+P+AVA L ++ +TL V
Sbjct: 65 GGYTPPD----TISGAIIGTAFGILSGQGETAGIAIAVPIAVATQQLDVLAKTLDVYFVK 120
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
D A G+++ I +H+ +L+L L VP L + + V + +P + +G+
Sbjct: 121 KADNDAKNGDYSKIGFYHYSSLVLITLFKIVPIFLAIMLGGEYVADLFAKVPPIVMQGLN 180
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK 247
GA++ ++G+ M++NMM + +W F +GF + ++ I + ++G+A+A+ Y +
Sbjct: 181 SAGALLPSIGFGMLLNMMLKKNMWVFLLIGFICSVYGGMSTIGISLVGIAVAYFYDMIGS 240
Query: 248 K 248
K
Sbjct: 241 K 241
>ref|ZP_00604892.1| PTS system, mannose-specific IIC component [Enterococcus faecium
DO]
gb|EAN08785.1| PTS system, mannose-specific IIC component [Enterococcus faecium
DO]
Length = 80
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 77/80 (96%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALG 63
+SIIS ILVV++AF AG+EGILD+FQ HQPLVACTLIGLVTG+LEAG++LGGTLQM+ALG
Sbjct: 1 MSIISIILVVLVAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLEAGIVLGGTLQMIALG 60
Query: 64 WANIGAAVAPDAALASVAAA 83
WANIGAAVAPDAALASVA+A
Sbjct: 61 WANIGAAVAPDAALASVASA 80
>ref|YP_001334230.1| putative inner membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gb|ABR76000.1| putative inner membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 247
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 139/248 (56%), Gaps = 9/248 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQM-HQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
+++A L+ +IA L+G L M +PLV C L GLV G+L G+++G TL+++ LG
Sbjct: 2 LLTATLLGLIAALGILDGRLLGVSMIDRPLVMCALTGLVCGNLHEGILIGATLELIFLGN 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
IGAA PD SV A + SG +G A + AIP+++ L ++VR ++
Sbjct: 62 VAIGAAHPPDIVTGSVLATAFSIMSG----RGPEAALTIAIPVSMLAQTLGILVRVVNAR 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLN 183
H D+ AA+GN + H LL L +P + + +SAV L A+P +
Sbjct: 118 FGHLADRYAAQGNTRMVGLMHLAGPTLLYFLNGFLPVFFAILLGSSAVSWFLEAIPPVIT 177
Query: 184 EGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI-- 241
G+ + ++ A+G+A++I+MM + ++ P+ LGF +AA ++L +IA+ + V +AFI
Sbjct: 178 NGLIVASKILPALGFALLISMMLSSKLMPYLGLGFLIAAYTKLDIIAIALFAVVLAFIIS 237
Query: 242 -YLNLSKK 248
+LNL ++
Sbjct: 238 QFLNLKQQ 245
>ref|YP_001311623.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR36667.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 254
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 10/230 (4%)
Query: 18 FAGLEGILD-----QFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVA 72
F G+ ILD + + +PL+ TL+GLV G ++ G+++G L++++LG NIGAA
Sbjct: 10 FIGVICILDSRLLGRMNLERPLIVSTLVGLVLGDIQKGLMVGAALELISLGLVNIGAAAP 69
Query: 73 PDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKA 132
PD +AS+ A + S ++ +T AIP+AV G L +++RT+ L H D
Sbjct: 70 PDMNMASIIATSFAILSNADSEAALTI----AIPIAVLGQMLGVLMRTILANLTHKADSL 125
Query: 133 AAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGA 191
G + H + L L VP L + T V++++ +P+W+ G+ +
Sbjct: 126 IENGEYKKACNIHIVWGTFLYSLMYFVPIFLAIYFGTDLVKNIVEVIPSWITNGLNLSSK 185
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
++ A G+A++++ M + ++ PF GF + A S L++ + + +AF+
Sbjct: 186 ILTAYGFALLLSTMLSTKMLPFLLGGFFITAYSNLSVTGVAISACIVAFV 235
>ref|YP_075771.1| PTS system fructose/mannose-specific IIC component [Symbiobacterium
thermophilum IAM 14863]
dbj|BAD40927.1| PTS system fructose/mannose-specific IIC component [Symbiobacterium
thermophilum IAM 14863]
Length = 247
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 128/244 (52%), Gaps = 4/244 (1%)
Query: 9 AILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIG 68
A+L+ IIA+ A + + H+ L+ + GL+ G ++ G+ +G TL +++LG G
Sbjct: 8 ALLLGIIAYIAVVMNLGASVFWHEALIVGAVTGLIVGDVQMGLTIGATLTLMSLGMWTYG 67
Query: 69 AAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHA 128
A PD + AI+ G G+ + A+P A+ L ++ R +T +H
Sbjct: 68 GATIPD----FMTGAILGTAFGALPGVGVEGGLAIAVPAALLMTQLDVLGRATTTLFIHG 123
Query: 129 GDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQI 188
DKA AEGN + +H + L GL P L V + VQ+ +N MP+ + M++
Sbjct: 124 ADKAVAEGNVRAVTWWHLLGQLPWGLTRFFPVFLAVWLGAEPVQNFINWMPDHVMNAMRV 183
Query: 189 GGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
GA++ A+G+A+++ MM ++ WPF LG+ L A ++ +I + + VA+ +YLNL +
Sbjct: 184 TGAVLPALGFALLLTMMPLKKYWPFALLGYVLFAYLKVPMIGIALTAVAVGILYLNLKEV 243
Query: 249 GGNG 252
G
Sbjct: 244 RARG 247
>ref|NP_814239.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO80310.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 267
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 16/237 (6%)
Query: 23 GILDQFQM----HQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPD---A 75
G+LDQ + + PL A T GLV G ++ G+++G TLQ++ LG A G A PD
Sbjct: 18 GVLDQISIQIGPYTPLFAATFTGLVLGDVQTGLMIGATLQLMTLGVATYGGATVPDFLSG 77
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
A+ A AII + KG + A+P+ + L ++ R +T H D+ A E
Sbjct: 78 AIMGTAYAII-------SGKGAEYGIGVAVPIGLLLTQLDILGRMANTFFQHKADRYAEE 130
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
GN+ G+ER + + + + +P + +A V ++ + +P W+ G++ GA++ A
Sbjct: 131 GNYKGVERCNVLGIFPWTISRVIPVFIGLAFGEQVVNAINDWIPIWVMNGLKAAGAILPA 190
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGV--IGVAIAFIYLNLSKKGG 250
+G A+++ + + WP+F +GF L A +GV +G+A+A IY+ KGG
Sbjct: 191 MGIAILMRYLPIKTYWPYFIIGFVLLAYGAQFFSVLGVALVGLALAAIYVMNHNKGG 247
>ref|ZP_02327588.1| PTS system, N-acetylgalactosamine-specific IIC component 1
(EIIC-AGA) (N-acetylgalactosamine-permease IIC component
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 255
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 6/251 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M+D+ +I A+L+ + A AGL+ F +H+P+V ++GL+ G L+ GVI G ++++
Sbjct: 1 MADM-LIPALLIALWAGIAGLDLFNGLFHIHRPIVTGVIVGLILGDLKTGVITGAAIELV 59
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
G + A P+ + V + +G + I A+P AVA ++ T
Sbjct: 60 WAGMVPLAGAQPPNVVIGGVIGTAFAILTGQEPKVAI----GIAVPFAVAVQACITLMFT 115
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+ ++H DK A E N GIER +++ L+L + V L + A ++V+ +P+
Sbjct: 116 AFSPVMHKADKYAEEANTKGIERINYLGLILLFIFYFVIGFLPIFFGAEAAKNVVEMLPS 175
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL +G+ + G M+ A+G+AM++ +M ++ FF +GF LA L +IA+ +IG++IA
Sbjct: 176 WLIDGLGVAGGMMAAIGFAMLLKIMLKKQYVAFFIVGFILATYLNLPIIAVALIGLSIA- 234
Query: 241 IYLNLSKKGGN 251
+Y G N
Sbjct: 235 LYDFYKSSGDN 245
>ref|YP_001087561.1| PTS system, IIc component [Clostridium difficile 630]
ref|ZP_01803793.1| hypothetical protein CdifQ_04001185 [Clostridium difficile
QCD-32g58]
emb|CAJ67921.1| PTS system, IIc component [Clostridium difficile 630]
Length = 254
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 3/238 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
IL+ +IAFFA + + ++P+V L+GL G+L G+++G TL+++ +G +
Sbjct: 7 QVILITLIAFFAYMHSFVGSTMHNRPIVVAPLVGLALGNLHTGIVIGSTLELVFMGAFPV 66
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
GA+ PD S+ A ++ +G + A A + + FL +V T H
Sbjct: 67 GASNPPDFVSGSIIATAFVILTGQDVSAAVVLAVPIATLVLLIDNFLMTVVLTWGA---H 123
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
D+ A EGN G+ER + + L +A+ + ++ ++ +L+ +P+++ GM
Sbjct: 124 IADRYAEEGNIEGVERVQLLFGIGNKLILAIIVGIGFSLGVPVIEKILSFIPSYVTHGMD 183
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ ++ A+G+AM+ MM ++ F LGF L A +T+ + + G+AIA IY+N
Sbjct: 184 VAAGVIPAIGFAMLARMMLNKKTVAFLLLGFILVAYLNITVTGVALFGLAIALIYVNF 241
>ref|ZP_02726125.1| PTS system, IIc component [Clostridium difficile QCD-37x79]
ref|ZP_02745033.1| PTS system, IIc component [Clostridium difficile QCD-63q42]
ref|ZP_02756438.1| PTS system, IIc component [Clostridium difficile QCD-76w55]
ref|ZP_02764526.1| PTS system, IIc component [Clostridium difficile QCD-97b34]
Length = 252
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 3/238 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
IL+ +IAFFA + + ++P+V L+GL G+L G+++G TL+++ +G +
Sbjct: 5 QVILITLIAFFAYMHSFVGSTMHNRPIVVAPLVGLALGNLHTGIVIGSTLELVFMGAFPV 64
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
GA+ PD S+ A ++ +G + A A + + FL +V T H
Sbjct: 65 GASNPPDFVSGSIIATAFVILTGQDVSAAVVLAVPIATLVLLIDNFLMTVVLTWGA---H 121
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
D+ A EGN G+ER + + L +A+ + ++ ++ +L+ +P+++ GM
Sbjct: 122 IADRYAEEGNIEGVERVQLLFGIGNKLILAIIVGIGFSLGVPVIEKILSFIPSYVTHGMD 181
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ ++ A+G+AM+ MM ++ F LGF L A +T+ + + G+AIA IY+N
Sbjct: 182 VAAGVIPAIGFAMLARMMLNKKTVAFLLLGFILVAYLNITVTGVALFGLAIALIYVNF 239
>ref|YP_697321.1| PTS system, IIC component [Clostridium perfringens ATCC 13124]
ref|ZP_02633909.1| PTS system, IIC component [Clostridium perfringens E str. JGS1987]
ref|ZP_02637208.1| PTS system, IIC component [Clostridium perfringens B str. ATCC
3626]
ref|ZP_02640442.1| PTS system, IIC component [Clostridium perfringens CPE str. F4969]
ref|ZP_02643650.1| PTS system, IIC component [Clostridium perfringens NCTC 8239]
ref|ZP_02864481.1| PTS system, IIC component [Clostridium perfringens C str. JGS1495]
ref|ZP_02954149.1| PTS system, IIC component [Clostridium perfringens D str. JGS1721]
gb|ABG84004.1| PTS system, IIC component [Clostridium perfringens ATCC 13124]
gb|EDS80522.1| PTS system, IIC component [Clostridium perfringens C str. JGS1495]
gb|EDT13467.1| PTS system, IIC component [Clostridium perfringens E str. JGS1987]
gb|EDT22636.1| PTS system, IIC component [Clostridium perfringens B str. ATCC
3626]
gb|EDT25928.1| PTS system, IIC component [Clostridium perfringens CPE str. F4969]
gb|EDT70823.1| PTS system, IIC component [Clostridium perfringens D str. JGS1721]
gb|EDT77423.1| PTS system, IIC component [Clostridium perfringens NCTC 8239]
Length = 263
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 8/250 (3%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQ--MHQPLVACTLIGLVTGHLEAGVILGGTLQ 58
M +I II +L+ + AF + + +L + H+PL+A GL+ G ++ G+ +G TL+
Sbjct: 1 MQEIGIIQILLLSVWAFLS-INEMLGPYLGLWHRPLIAGFGAGLILGDIQTGLFVGATLE 59
Query: 59 MLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIV 118
M++LG + G AV PD ++ +G + + GI + +P+A+ G +L ++
Sbjct: 60 MMSLGVHSYGGAVVPDYTTGAILGVTFGYLTGSY-ESGI----ALGVPIALLGSYLDVLA 114
Query: 119 RTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
R + H D AA GN G+ R+H + GL A+P + + + + +
Sbjct: 115 RLSTGICAHKADSHAANGNLKGMWRWHLFGSIPWGLSRAIPVFVGAFFGSEVATAFIEKV 174
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
P WL G G + A+G A+++N + + W F +GF L L +IA+G+IG+
Sbjct: 175 PVWLTNGFAAAGRAMPALGVAILLNYLPITKQWYFAIMGFILVCFLNLPMIAVGLIGLIT 234
Query: 239 AFIYLNLSKK 248
A IY+ L K
Sbjct: 235 AVIYVELYHK 244
>ref|ZP_00604332.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN09333.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 270
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 5/249 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M+DIS ++ +A G++ L Q+ +P ++ L G++ G + G+++G TLQ++
Sbjct: 1 MNDISFFQIFSLICLAILGGIDPYLSGLQLSKPAISGFLAGIIMGDINTGLLVGATLQLM 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
LG G + PD ++ + V SG KGI FA ++P+ + + L ++ R
Sbjct: 61 VLGVGTFGGSSIPDFGTGAIIGTALGVVSG----KGIEFAIGISVPVGLLLVQLDILARF 116
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+H DK E NF I +++L+ L A+P L + V +VLN P+
Sbjct: 117 CGVYFLHRVDKHIEEENFHKISLEAWLSLVPIALSRAIPVGLCLIFGNEVVNTVLNYAPD 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+++ GA++ VG A++++ + R + F +G+ LAA + ++ + G+A A
Sbjct: 177 WLMGGLKLAGAILPVVGIAILLHYLPIRNFFGFLIIGYILAAYLNIPMMGISFAGLAAAI 236
Query: 241 I-YLNLSKK 248
I Y L K
Sbjct: 237 IHYKKLQDK 245
>ref|NP_563547.1| probable PTS system [Clostridium perfringens str. 13]
dbj|BAB82337.1| probable PTS system [Clostridium perfringens str. 13]
Length = 265
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 8/250 (3%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQ--MHQPLVACTLIGLVTGHLEAGVILGGTLQ 58
M +I II +L+ + AF + + +L + H+PL+A GL+ G ++ G+ +G TL+
Sbjct: 3 MQEIGIIQILLLSVWAFLS-INEMLGPYLGLWHRPLIAGFGAGLILGDIQTGLFVGATLE 61
Query: 59 MLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIV 118
M++LG + G AV PD ++ +G + + GI + +P+A+ G +L ++
Sbjct: 62 MMSLGVHSYGGAVVPDYTTGAILGVTFGYLTGSY-ESGI----ALGVPIALLGSYLDVLA 116
Query: 119 RTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
R + H D AA GN G+ R+H + GL A+P + + + + +
Sbjct: 117 RLSTGICAHKADSHAANGNLKGMWRWHLFGSIPWGLSRAIPVFVGAFFGSEVATAFIEKV 176
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
P WL G G + A+G A+++N + + W F +GF L L +IA+G+IG+
Sbjct: 177 PVWLTNGFAAAGRAMPALGVAILLNYLPITKQWYFAIMGFILVCFLNLPMIAVGLIGLIT 236
Query: 239 AFIYLNLSKK 248
A IY+ L K
Sbjct: 237 AVIYVELYHK 246
>ref|NP_964592.1| phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC,
probable sorbose specific [Lactobacillus johnsonii NCC
533]
gb|AAS08558.1| phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC,
probable sorbose specific [Lactobacillus johnsonii NCC
533]
Length = 265
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 143/266 (53%), Gaps = 7/266 (2%)
Query: 6 IISAILVVIIA-FFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
++ IL++++A + A G +Q + P++ L+GL+ G+L G+++GGTLQ+++LG
Sbjct: 4 VLQNILIILLAAYMAWDNGTGNQITGNWPVIIGMLVGLIMGNLNVGLVIGGTLQLMSLGV 63
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
A IG + P+ +A++ I +++G T I + +P+ + L L ++++ ++
Sbjct: 64 AAIGGSSIPEYGVATIVGVFIAIRTGASTGTAI----AVGLPVGMLTLQLDVVIKIINNF 119
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
H + E F ++ ++ + + L+ +P L+V T V+ +L+ +P W+
Sbjct: 120 FAHWSQRLLHEKKFNKMDGVFYLTIFVWMLKYIIPIGLVVMFGTPIVKLILHVIPTWVTN 179
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF-IY- 242
G+ I G M+ VG M++ M ++ + GF LA ++ ++ + ++G+A + IY
Sbjct: 180 GLTIAGGMLPVVGIGMLLRFMPVKKYLAYLLAGFVLAGYLKVPILGIAILGLAATYEIYR 239
Query: 243 LNLSKKGGNGGNAAGSADPIGDILED 268
+N +KK +AG+ + GD ++
Sbjct: 240 INSAKKDTQEVQSAGAVEDEGDDFDE 265
>ref|YP_177564.1| PTS system, mannose-specific enzyme II, C component [Bacillus
clausii KSM-K16]
dbj|BAD66603.1| C component PTS system mannose-specific enzyme II [Bacillus clausii
KSM-K16]
Length = 226
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Query: 25 LDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAI 84
+ Q +P+V L+GLV G G+I+G TL+++ +G +G+A PD +V I
Sbjct: 1 MGQSMFERPIVMGPLVGLVMGDFVMGIIVGATLELVWMGIVGVGSATPPD----TVTGGI 56
Query: 85 IMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERF 144
+ T +G A + AIP+A+ L M+VRT++ L+H D+ A GNF +
Sbjct: 57 LGTAYAIMTGEGPEVALALAIPIALLAQSLGMLVRTINAPLIHKADRYAQSGNFKKVASL 116
Query: 145 HFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINM 204
H++ + L +P+ L + V + V ++ +P + +G+ AM A+G+A+++ M
Sbjct: 117 HWLGVFFFFLNGFIPSFLGILVGSEVVNVIIEWIPAVVTDGLGAAAAMFPALGFALLMQM 176
Query: 205 MATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
++++ PFF LGF LA L +I + +IG IA + L +
Sbjct: 177 TFSKKLAPFFFLGFVLAVFLGLDIIPVAIIGAIIATVMYQLQQS 220
>ref|YP_814351.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Lactobacillus gasseri ATCC 33323]
gb|ABJ59913.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Lactobacillus gasseri ATCC 33323]
Length = 265
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 16 AFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDA 75
A+ A G +Q + P++ L+GL+ G+L G+++GGTLQ+++LG A IG + P+
Sbjct: 15 AYMAWDNGTGNQITGNWPVIIGMLVGLIMGNLSVGLVIGGTLQLMSLGVAAIGGSSIPEY 74
Query: 76 ALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAE 135
+A++ I +++G T I + +P+ + L L ++++ ++ H + E
Sbjct: 75 GVATIVGVFIAIRTGASTGTAI----AVGLPVGMLTLQLDVVIKIINNFFAHWSQRLLHE 130
Query: 136 GNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
F ++ ++ + + L+ +P AL+V T V+ +L+ +P W+ G+ I G M+
Sbjct: 131 KKFNKMDGVFYLTIFVWMLKYIIPIALVVMFGTPIVKLILHVIPAWVTNGLTIAGGMLPV 190
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF-IY-LNLSKKGGNGG 253
VG M++ M ++ + GF LA ++ ++ + ++G+A + IY +N +KK
Sbjct: 191 VGIGMLLRYMPVKKYLAYLLAGFVLAGYLKVPILGIAILGLAATYEIYRINSAKKDKEEL 250
Query: 254 NAAGSADPIGDILED 268
AG+ + GD ++
Sbjct: 251 QTAGTVEDEGDDFDE 265
>ref|YP_075107.1| PTS system mannose-specific IID component [Symbiobacterium
thermophilum IAM 14863]
dbj|BAD40263.1| PTS system mannose-specific IID component [Symbiobacterium
thermophilum IAM 14863]
Length = 484
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 123/217 (56%), Gaps = 7/217 (3%)
Query: 45 GHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTA 104
G L G+++GGTL+ + +G +IG +V P+ A+ +V + +G +G+ A A
Sbjct: 2 GDLHTGLVVGGTLEFVFMGAVDIGGSVPPNYAIGAVLGTAFAIATG----QGVETALLIA 57
Query: 105 IPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLV 164
+P A+ G F ++ +T S+ V+A ++AA G+ I F + LL L A+P + +
Sbjct: 58 VPAALLGSFFEVLAKTFSSFFVNAAERAADRGDDRSIAMFMHLGNLLHFLAYALPTFIAL 117
Query: 165 AVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAIS 224
A+ SAVQ + ++P WLN G+ + G M+ A+G+A+++N +A + PFF +GF LAA +
Sbjct: 118 ALGASAVQRLAASIPPWLNSGISVAGKMLPALGFALLLNSLAPGTMLPFFFVGFLLAAYT 177
Query: 225 QLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSADP 261
++ + V+ + IA I + + N +AA DP
Sbjct: 178 SWGVLGIAVLAILIALIIQHYRQ--ANDEDAA-ELDP 211
>ref|ZP_01966846.1| hypothetical protein RUMTOR_00387 [Ruminococcus torques ATCC 27756]
gb|EDK25492.1| hypothetical protein RUMTOR_00387 [Ruminococcus torques ATCC 27756]
Length = 277
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 18/262 (6%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQ----MHQPLVACTLIGLVTGHLEAGVILGGT 56
M DISII A+LV ++AF G+ DQF ++QP+V C +IG + G+ E G+++GG
Sbjct: 1 MGDISIIQALLVFVVAFIMGI----DQFSFLESLYQPIVTCPIIGAILGNFELGIVVGGA 56
Query: 57 LQMLALGWANIGAAVAPDAALASVAAAIIMVK-SGDFTQKGITFAYSTAIPLAVAGLFLT 115
Q++ +G IG A P+A L + A I V + T G+ A AIP AV G +
Sbjct: 57 YQLIQIGSMPIGGAQPPNAILGGIMATIFAVSLDMEATADGVGAAMGLAIPFAVFGQYAV 116
Query: 116 MIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAV--PAALLVAVPTSAVQS 173
+ T + ++ DK A E N GI +F+ + + G V A L
Sbjct: 117 TLTFTFMSGMMAKADKYAEEANVKGIRNINFLEMAVLGCLFGVLAVAGLYGGTALGETLK 176
Query: 174 VLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQ-------L 226
+ +W+ G+ G + VG+A+++ +M + E+W F GFA+A I
Sbjct: 177 DFSYQFSWVMAGLDAAGGAMKFVGFAILMKVMMSGEMWGFLLAGFAMALICAANASTAGA 236
Query: 227 TLIAMGVIGVAIAFIYLNLSKK 248
TL+ +G AIA K
Sbjct: 237 TLLLCAFVGAAIAIYDFTTQTK 258
>ref|YP_001308097.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
gb|ABR33141.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 254
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 4/242 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
AILV +IA F E L + +P+V L+GLV G L+ G+I+G TL+M +G +
Sbjct: 3 QAILVGLIAMFVTFEWCLGSCLITRPIVTGVLVGLVMGDLQTGIIMGATLEMAFIGAVTL 62
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
GAAV PD + + +G + +T A+ A + +T+ V +H
Sbjct: 63 GAAVPPDVITGGILGTAFAIATGQGAEVALTLAFPIATLFLLVDNVMTLFVMPF---FLH 119
Query: 128 AGDKAAAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
DK EGNF G+ R HF+ +++ L + AL + + + + +VL+++P ++ G+
Sbjct: 120 KADKYVEEGNFNGVSRMHFLGGFVVKSLPRGIFVALALYLGSPFMSAVLDSIPQFVQNGL 179
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
+ + A+G +++ M+ T+++ FF LGFA++A ++ ++ + + IA + + L
Sbjct: 180 VVAAGFIPALGISLLAQMILTKKLVIFFVLGFAISAYLKIPMLGVAIFATIIAIVLVGLQ 239
Query: 247 KK 248
Sbjct: 240 NN 241
>ref|YP_075077.1| PTS system N-acetylgalactosamine-specific IIC component
[Symbiobacterium thermophilum IAM 14863]
dbj|BAD40233.1| PTS system N-acetylgalactosamine-specific IIC component
[Symbiobacterium thermophilum IAM 14863]
Length = 267
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 12/225 (5%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQ----MHQPLVACTLIGLVTGHLEAGVILGGTLQ 58
+I+ + ILV I+ F A + DQF ++QP+V +IG + G + G+I+GGT Q
Sbjct: 4 EITALQIILVFIVTFIAAI----DQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQ 59
Query: 59 MLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIV 118
++ +G IG A P+A + + AAI+ + G Q T A +TAIP ++ G + ++
Sbjct: 60 LMTIGNMPIGGAQPPNAVIGGIMAAILAITLG--LQP--TVAVATAIPFSLLGQYAVTLL 115
Query: 119 RTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
T + ++ D+AA E + I ++ A+ + GL V L + V++A+
Sbjct: 116 FTAMSPVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLFFVGGAAFGNRVVSAI 175
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAI 223
P WL G+ G M+ VG+A+++ +MA+R++W F+ +GFALA I
Sbjct: 176 PQWLMSGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANI 220
>ref|NP_561238.1| probable PTS system [Clostridium perfringens str. 13]
dbj|BAB80028.1| probable PTS system [Clostridium perfringens str. 13]
Length = 258
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 133/236 (56%), Gaps = 4/236 (1%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
II +LV +A A ++ +++PL+A +L+GLV G + G+I+G TL+++ LG
Sbjct: 2 IIQMLLVTAVAVIATIDYNGPVLMLYRPLIAGSLVGLVLGDFQQGMIIGATLELMWLGVT 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
+G PD +++ AI+ G + G+T + A+P+AV L ++ +T+
Sbjct: 62 AVGGYTPPD----TISGAIVGTALGILSGHGVTAGVAIAVPVAVVTQQLDVLAKTVDIYF 117
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
V D+AA +G+ + I +H +L+L L VP + + + ++ + + +P + G
Sbjct: 118 VKKADEAAKKGDPSKIGLYHHSSLVLIVLFKVVPIFAALVLGGNYIKDLFDKIPPVIMTG 177
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ + G M+ A+G+AM++NMM + +WP+ +GF +A L+ I + ++GVAI F+
Sbjct: 178 LNVAGGMLPAIGFAMLLNMMLKKNMWPYLLVGFVFSAFLNLSTIGIALLGVAIVFL 233
>ref|YP_001456609.1| hypothetical protein CKO_05130 [Citrobacter koseri ATCC BAA-895]
gb|ABV16173.1| hypothetical protein CKO_05130 [Citrobacter koseri ATCC BAA-895]
Length = 249
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 32 QPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI-GAAVAPDAALASVAAAIIMVKSG 90
QP+V +GL+ G+++ +I+G +Q++ LG + G V D ALA+ + I VK+G
Sbjct: 31 QPVVVAVFVGLLLGNMQTAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACISIPIAVKAG 90
Query: 91 DFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALL 150
A + AIP V G+FL + RTL+ A VH DK A N AGI R F+
Sbjct: 91 ----MDPNLAIALAIPFGVIGVFLDQLRRTLNAAWVHMADKHAETANMAGIMRCAFLYPA 146
Query: 151 LQGLRIAVPAALLV-AVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATRE 209
L GL + P + V+S L MP+WL +I G ++ A+G+A+ I ++ +
Sbjct: 147 LLGLALRFPVVFAANYFGQNVVESFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKS 206
Query: 210 VWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 250
+ P+F GF ++ ++AM + G +AF+ L+K G
Sbjct: 207 LLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIKGLAKNEG 247
>ref|NP_463556.1| hypothetical protein lmo0023 [Listeria monocytogenes EGD-e]
ref|ZP_00232696.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes str. 1/2a F6854]
ref|ZP_01931445.1| hypothetical protein LMIG_00298 [Listeria monocytogenes FSL N3-165]
ref|ZP_01934020.1| hypothetical protein LMMG_01727 [Listeria monocytogenes F6900]
ref|ZP_01935135.1| hypothetical protein LMOG_01034 [Listeria monocytogenes J0161]
ref|ZP_01939623.1| hypothetical protein LMPG_00125 [Listeria monocytogenes J2818]
emb|CAC98238.1| lmo0023 [Listeria monocytogenes]
gb|EAL07350.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes str. 1/2a F6854]
gb|EBA20613.1| hypothetical protein LMOG_01034 [Listeria monocytogenes J0161]
gb|EBA24534.1| hypothetical protein LMPG_00125 [Listeria monocytogenes J2818]
gb|EBA30597.1| hypothetical protein LMIG_00298 [Listeria monocytogenes FSL N3-165]
gb|EBA33269.1| hypothetical protein LMMG_01727 [Listeria monocytogenes F6900]
Length = 267
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++I IL+VI+A L+ + ++ P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A PD ++ + V SG + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGASIPDFTTGAIVGTVFAVLSGQDAE----FAIGLAIPVGLLMVQLDILARFTN 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ S V +LN +P WL
Sbjct: 118 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 178 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 237
Query: 243 LNLSKK-----GGNGGNAAGSADPIGDILED 268
+ K G NG G + G+ ED
Sbjct: 238 FKQNFKNPVAAGANGAALVGEENEDGE-YED 267
>ref|NP_458164.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
ref|NP_462669.1| putative phosphotransferase system enzyme IIC [Salmonella
typhimurium LT2]
ref|NP_807378.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
ref|YP_152730.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
ref|YP_218677.1| putative phosphotransferase system enzyme IIC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
ref|YP_001590830.1| hypothetical protein SPAB_04686 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
ref|ZP_02337577.1| hypothetical protein Sentent_01905 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
ref|ZP_02342712.1| hypothetical protein Sentente_00490 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
ref|ZP_02348636.1| hypothetical protein Sententeri_01935 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
ref|ZP_02559322.1| hypothetical protein Sente_03830 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
ref|ZP_02565628.1| hypothetical protein Senten_07450 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
ref|ZP_02573441.1| hypothetical protein Sententer_01000013_0100012895 [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
ref|ZP_02645295.1| hypothetical protein Senterenterica_06721 [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
ref|ZP_02650147.1| hypothetical protein Sententeric_04038 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
ref|ZP_02658362.1| hypothetical protein Sententerica_20130 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
ref|ZP_02660449.1| hypothetical protein Senteenterica_04339 [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
ref|ZP_02680450.1| hypothetical protein Sentericaenterica_22495 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
ref|ZP_02682440.1| hypothetical protein Salmentericaenterica_05235 [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
ref|ZP_02698805.1| hypothetical protein Saentericaenterica_12301 [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
ref|ZP_02702197.1| hypothetical protein Salmoentericaenterica_00845 [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
ref|ZP_02830382.1| hypothetical protein Salentericaenterica_03276 [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
pir||AD0966 probable PTS system protein STY4015 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gb|AAL22628.1| putative phosphotransferase system enzyme IIC [Salmonella
typhimurium LT2]
emb|CAD03224.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Typhi]
gb|AAO71238.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gb|AAV79418.1| putative PTS system protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gb|AAX67596.1| putative phosphotransferase system enzyme IIC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gb|ABX69997.1| hypothetical protein SPAB_04686 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 249
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 115/221 (52%), Gaps = 6/221 (2%)
Query: 32 QPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI-GAAVAPDAALASVAAAIIMVKSG 90
QP+V +GL+ G+++ +I+G +Q++ LG + G V D ALA+ + I VK+G
Sbjct: 31 QPVVIAVFVGLLLGNMQTAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACISIPIAVKAG 90
Query: 91 DFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALL 150
A + AIP V G+FL + RTL+ A VH DK A N AGI R F+
Sbjct: 91 ----MDPNLAIALAIPFGVIGVFLDQLRRTLNAAWVHMADKHAETANMAGIMRCAFLYPA 146
Query: 151 LQGLRIAVPAALLV-AVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATRE 209
L GL + P V+S L MP+WL +I G ++ A+G+A+ I ++ +
Sbjct: 147 LLGLVLRFPVVFAANYFGQDVVESFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKS 206
Query: 210 VWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 250
+ P+F GF ++ ++AM + G +AF+ L+K G
Sbjct: 207 LLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIKGLAKNEG 247
>ref|ZP_01772939.1| Hypothetical protein COLAER_01965 [Collinsella aerofaciens ATCC
25986]
gb|EBA38880.1| Hypothetical protein COLAER_01965 [Collinsella aerofaciens ATCC
25986]
Length = 257
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ AIL+ +IA F L+ L +P+V C L+G+V G L++G+ +G +L++L +G
Sbjct: 2 LVQAILIGLIAAFGKLDYQLGTLYAFRPIVLCPLVGIVLGDLQSGLAIGASLELLFMGSI 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
+IGA V PD + V A ++ G T+ I + A+P+A L + +V L
Sbjct: 62 SIGAYVPPDECIGGVLACAFAIQLGQSTEAAI----ALAMPIATLCLAIKNVVNAGMPLL 117
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP----TSAVQSVLNAMPNW 181
V D A++GN GI H+I GL I V A +L +V AVQ +L+ +P +
Sbjct: 118 VDRADVFASKGNLKGIYAMHWII----GLVIVVLAFILCSVSFYLGADAVQGLLDFIPTF 173
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ +G + ++ A+G+AM+ ++ T+++ PF+ LGF L + + + ++ + +I + I
Sbjct: 174 VLDGFGVAANILPAMGFAMLGRLVLTKQLVPFYFLGFLLCSYANVPVLGVALIAIIIGID 233
Query: 242 YLNLSKKGGNGGNAAGSADPIGD 264
+L GG + D D
Sbjct: 234 KYDLLGLGGAQSQLSVEGDEDDD 256
>ref|ZP_02078239.1| hypothetical protein EUBDOL_02059 [Eubacterium dolichum DSM 3991]
gb|EDP10796.1| hypothetical protein EUBDOL_02059 [Eubacterium dolichum DSM 3991]
Length = 529
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 5/222 (2%)
Query: 28 FQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMV 87
+ + +P+ A L+G++ G +E G+ +G T++++ +G IG +V P+A +A + + +
Sbjct: 26 WMISRPVFAGPLVGMILGDIETGLYVGATVELMYMGILPIGGSVPPNAQIAGTISTVFAI 85
Query: 88 KSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFI 147
SGD GI + AIP+ L M+ ++ L+H D+ GNF +ER H +
Sbjct: 86 TSGD-ASVGI----ALAIPIGTLAQLLIMLAWNINIYLMHRADQYIEAGNFKAVERAHLM 140
Query: 148 ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMAT 207
+ + V + L + + V+ +++ MP WL+ G+ I M+ AVG AM++ MM
Sbjct: 141 GIPIFFSVFFVSSFLAIYFGSDFVKMLVDGMPIWLSNGLTIASKMLPAVGMAMLLKMMDF 200
Query: 208 REVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
++ W FF GF L L A+ +I V IA LS+
Sbjct: 201 KKYWCFFLGGFVLVGYLNLNQTAVSLIAVVIAVAIYQLSENN 242
>ref|ZP_01942160.1| hypothetical protein LMRG_02452 [Listeria monocytogenes 10403S]
gb|EBA22008.1| hypothetical protein LMRG_02452 [Listeria monocytogenes 10403S]
Length = 267
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 10/271 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++I IL+VI+A L+ + + P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAIWQIILLVILAACTILDALTLVIGFNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A PD ++ + V SG + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGASIPDFTTGAIVGTVFAVLSGQDAE----FAIGLAIPVGLLMVQLDILARFTN 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ S V +LN +P WL
Sbjct: 118 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 178 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 237
Query: 243 LNLSKK-----GGNGGNAAGSADPIGDILED 268
+ K G NG G + G+ ED
Sbjct: 238 FKQNFKNPVAAGANGAALVGEENEDGE-YED 267
>ref|NP_469369.1| hypothetical protein lin0022 [Listeria innocua Clip11262]
ref|YP_012638.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes str. 4b F2365]
ref|ZP_00230817.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes str. 4b H7858]
ref|ZP_01926021.1| hypothetical protein LMHG_01619 [Listeria monocytogenes FSL N1-017]
ref|ZP_01942571.1| hypothetical protein LMSG_02123 [Listeria monocytogenes HPB2262]
ref|ZP_02278480.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes FSL J1-194]
ref|ZP_02285973.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes FSL J1-175]
ref|ZP_02318986.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes FSL J2-064]
ref|ZP_02689032.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes FSL J2-071]
emb|CAC95255.1| lin0022 [Listeria innocua]
gb|AAT02815.1| putative PTS system, mannose-specific, IIC component [Listeria
monocytogenes str. 4b F2365]
gb|EAL09360.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes str. 4b H7858]
gb|EBA30244.1| hypothetical protein LMHG_01619 [Listeria monocytogenes FSL N1-017]
gb|EBA38385.1| hypothetical protein LMSG_02123 [Listeria monocytogenes HPB2262]
Length = 267
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D+++ IL+VI+A L+ + ++ P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A PD ++ + V SG + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGASIPDFTTGAIVGTVFAVLSGQDAE----FAIGLAIPVGLLMVQLDILARFTN 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ S V +LN +P WL
Sbjct: 118 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 178 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 237
Query: 243 LNLSKK-----GGNGGNAAGSADPIGDILED 268
+ K G NG G + G+ ED
Sbjct: 238 FKQNFKNPVAAGANGAALVGEENEDGE-YED 267
>ref|ZP_01927932.1| PTS system, IIC component [Listeria monocytogenes FSL N1-017]
ref|ZP_02285106.1| PTS system, IIC component [Listeria monocytogenes FSL R2-503]
ref|ZP_02320759.1| PTS system, IIC component [Listeria monocytogenes FSL J2-064]
gb|EBA28416.1| PTS system, IIC component [Listeria monocytogenes FSL N1-017]
Length = 272
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 135/264 (51%), Gaps = 22/264 (8%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
+AIL+ + A FA E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +I
Sbjct: 6 TAILLALAAMFANGEYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSI 65
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS----- 122
GA++ P+ S+ + +G+ T A + IP+A L ++V+ L
Sbjct: 66 GASIPPEIISGSILGTAFAISTGEST----AVALALGIPIAS----LVLVVKNLCFIFVL 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNA 177
VH DK A EGN GI R LL G L I +P ++VA V + +Q+VL+A
Sbjct: 118 PYFVHKADKYALEGNSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDA 173
Query: 178 MPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVA 237
+P ++ G+ I ++ A G+A+++ +M ++ FF GFALA ++ + + +
Sbjct: 174 IPAFVITGLGIATGLLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFAAC 233
Query: 238 IAFIYLNLSKKGGNGGNAAGSADP 261
+A I + + G + +P
Sbjct: 234 LALILTGYATLKNDNGPKNSNTEP 257
>ref|YP_803742.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
gb|ABJ67300.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
Length = 261
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 8 SAILVVIIAFFAGLEG-ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
AIL+ II+ F ++ +L + QPLV L+G+ G L G+I+G +L+++ +G N
Sbjct: 4 KAILLGIISVFGVMDSRMLGRTNFEQPLVMGALVGIALGDLTKGLIVGASLELIFMGIVN 63
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALV 126
IGAA PD L SV A + S Q +T A+P+A+ G + +++R + V
Sbjct: 64 IGAAAPPDLVLGSVMATAFAILSHTNAQTALTI----ALPVAILGQMVGILLRMFMSTFV 119
Query: 127 HAGDKAAAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
H + GNFA RFH + +L L VP + + V+ ++ ++P+WL +G
Sbjct: 120 HRAESDIENGNFAKARRFHILWGPILYSLMYFVPVFIAIYFGADVVKDIVQSIPSWLTDG 179
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
+ + ++ A G+A+++ M +++ + +GF + A L+ V GVAI
Sbjct: 180 LNLASKILPAYGFALLMQTMVSKKTVVYLLIGFFITAYGGLS-----VTGVAI 227
>ref|YP_001310008.1| N-acetylgalactosamine-specific PTS system transporter subunit IIC
[Clostridium beijerinckii NCIMB 8052]
gb|ABR35052.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 266
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M I+++ IL+ I+A G + L+ + +P++ CTL G + G + G+I GG ++
Sbjct: 1 MHSITLLQGILLAIMAMIVGFDFWLEGLYIFRPIIVCTLTGAILGDITTGLIAGGLTELA 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
G +G P+ LA + +I +G + I A+P + ++ + +
Sbjct: 61 FAGLTPVGGTQPPNPILAGIMTTVIAYTTGADVKATI----GLALPFSFLMQYVILFYYS 116
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+ ++ DK A EG+ A R + L+ G+ V L V +++++ +MP
Sbjct: 117 AFSVFMNKADKYAEEGDTAAFTRLNITTTLIVGITYGVIVFLCTYVAQEPMRTLVESMPE 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLT-LIAMGVIGVAIA 239
WL G +I G ++ AVG+ +++ +M E PF +GF +A+ Q T L+ + +IG A A
Sbjct: 177 WLKHGFEIAGGILPAVGFGLLLRVMLKIEYVPFLIIGFLVASFVQFTNLLPVALIGAAFA 236
Query: 240 FI-YLNLSKK 248
Y+N K
Sbjct: 237 LYGYVNDKNK 246
>ref|ZP_02950750.1| PTS system, IIc component [Clostridium butyricum 5521]
gb|EDT74202.1| PTS system, IIc component [Clostridium butyricum 5521]
Length = 258
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Query: 11 LVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAA 70
LV++ F E F +QP++ ++GL+ G ++ G+ +GGTLQ+++LG +N G A
Sbjct: 10 LVILYGLFINYEKNSTMFGTYQPVMCGFIVGLILGDMKTGLYVGGTLQLMSLGISNFGGA 69
Query: 71 VAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGD 130
PD A++ I + +G + GIT IP+A+ + L ++ T L H +
Sbjct: 70 SVPDYQTATIVGTFITISTGQKPEVGITI----GIPVALFMVQLDVLRNTFGIFLQHKAE 125
Query: 131 KAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGG 190
K A + I+ + + + L +P L V V ++LN P WL G+ + G
Sbjct: 126 KYAESREYNKIQLMQMVGVAVTMLTTGIPVFLAVVFGPDLVNTILNYTPEWLIGGLSVAG 185
Query: 191 AMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
++ AVG +++ + + + +GF LA + ++ + ++G AIA LN K
Sbjct: 186 GLLPAVGIGLLLRYLPVKSYISYLIIGFVLAVYLNIPILGVALLGGAIAL--LNYKKN 241
>ref|ZP_02287590.1| PTS system, IIC component [Listeria monocytogenes FSL J1-175]
Length = 272
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 135/264 (51%), Gaps = 22/264 (8%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
+AIL+ + A FA E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +I
Sbjct: 6 TAILLALAAMFANGEYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSI 65
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS----- 122
GA++ P+ S+ + +G+ T A + IP+A L ++V+ L
Sbjct: 66 GASIPPEIISGSILGTAFAISTGEST----AVALALGIPIAS----LVLVVKNLCFIFVL 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNA 177
VH DK A EGN GI R LL G L I +P ++VA V + +Q+VL+A
Sbjct: 118 PYFVHKADKYALEGNSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDA 173
Query: 178 MPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVA 237
+P ++ G+ I ++ A G+A+++ +M ++ FF GFALA ++ + + +
Sbjct: 174 IPVFVITGLGIATGLLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFAAC 233
Query: 238 IAFIYLNLSKKGGNGGNAAGSADP 261
+A I + + G + +P
Sbjct: 234 LALILTGYATLKNDNGPKNSNTEP 257
>ref|ZP_00603299.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN10330.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 259
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 134/245 (54%), Gaps = 13/245 (5%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
I+ A+L+ I+AF A E L + +P+V G+V G ++ G+I+G TL++ +G
Sbjct: 2 IVQAVLLGIVAFVAQSEYALGTSLLSRPIVTGLFTGIVLGDVKTGIIMGATLELAFIGSF 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
++GA++ PD + + +G T+ + +P+A LT+I++ + L
Sbjct: 62 SVGASIPPDVVTGGILGTAFAITAGAGTETALLLG----LPIAT----LTLILKNIYLGL 113
Query: 126 V-----HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+ H D A EGN+ G+E H +A + L + V + V ++ + ++LN +P+
Sbjct: 114 LIPIMNHKADNYAEEGNYKGVEHMHLLAGIGLSLMLGVVVMVSYMVGSNTIGNLLNMIPD 173
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
++ +G+ + ++ A+G+AM+ ++ ++V P+F LGFA+A+ ++ + + + G +A
Sbjct: 174 FVQKGLSVATGLIPALGFAMLARLLINKQVAPYFFLGFAIASYLEIPVTGVAIFGAILAV 233
Query: 241 IYLNL 245
+ +N+
Sbjct: 234 VVVNI 238
>ref|ZP_02285785.1| PTS system, mannose-specific, IIC component, putative [Listeria
monocytogenes FSL R2-503]
Length = 260
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D+++ IL+VI+A L+ + ++ P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A PD ++ + V SG + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGASIPDFTTGAIVGTVFAVLSGQDAE----FAIGLAIPVGLLMVQLDILARFTN 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ S V +LN +P WL
Sbjct: 118 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 178 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 237
Query: 243 L--NLSKKGG 250
NL K G
Sbjct: 238 FKQNLQKSSG 247
>ref|ZP_02666899.1| hypothetical protein Senterienterica_10057 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
ref|ZP_02674877.1| hypothetical protein Sentericenterica_23486 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
Length = 249
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 6/221 (2%)
Query: 32 QPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI-GAAVAPDAALASVAAAIIMVKSG 90
QP+V +GL+ G+++ +I+G +Q++ LG + G V D ALA+ + I VK+G
Sbjct: 31 QPVVIAVFVGLLLGNMQTAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACISIPIAVKAG 90
Query: 91 DFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALL 150
A + AIP V G+FL + RTL+ A +H DK A N AGI R F+
Sbjct: 91 ----MDPNLAIALAIPFGVIGVFLDQLRRTLNAAWMHMADKHAETANMAGIMRCAFLYPA 146
Query: 151 LQGLRIAVPAALLV-AVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATRE 209
L GL + P V+S L MP+WL +I G ++ A+G+A+ I ++ +
Sbjct: 147 LLGLVLRFPVVFAANYFGQDVVESFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKS 206
Query: 210 VWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 250
+ P+F GF ++ ++AM + G +AF+ L+K G
Sbjct: 207 LLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIKGLAKNEG 247
>ref|ZP_02862951.1| hypothetical protein ANASTE_02178 [Anaerofustis stercorihominis DSM
17244]
gb|EDS72462.1| hypothetical protein ANASTE_02178 [Anaerofustis stercorihominis DSM
17244]
Length = 249
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 32 QPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGD 91
QP+V GL+ G + +I+G +L+M+ LG GA + D +LA V A I + S
Sbjct: 30 QPIVMALPFGLIYGDISKALIIGASLEMVYLGMVAAGANIPADESLAGVIAIPIALVSDI 89
Query: 92 FTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLL 151
+T A IP + G+ I RT+ H DK A E N GIER + L+
Sbjct: 90 SAATAVTLA----IPFGLLGVLQDQIRRTIQANFAHKADKYAEECNIKGIERCAILFPLI 145
Query: 152 QGLRIAVPAALLVAVPTS-AVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREV 210
G + P L S V++VL A+P WL G+++ G ++ A+G+A+ + ++ +
Sbjct: 146 LGFFLRFPPVFLANYFGSGVVENVLAAIPQWLTHGLEVTGGLLPALGFAITVFIIGKKTY 205
Query: 211 WPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
PFF LGF + ++ ++A + G +A + + L ++ N
Sbjct: 206 LPFFILGFFMVQYLKINVMAAAIFGTCMALLIVFLRRENQN 246
>ref|NP_815632.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO81702.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 263
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 8/265 (3%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
AIL+ IAF A E L + +P+V +G+V G ++ GVI+G TL++ +G ++
Sbjct: 4 QAILLGCIAFIAQSEYALGTSLLSRPIVTGLFVGIVLGDVKTGVIMGATLELAFIGSFSV 63
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTA-IPLAVAGLFLTMIVRTLSTALV 126
GA++ PD + + +G T+ + A + L + ++L +++ +S
Sbjct: 64 GASIPPDVVTGGILGTAFAITAGAGTETALVLGLPIATLTLILKNIYLGLLIPIMS---- 119
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
D+ A EG + G+ER H +A +A+ + AV ++ ++ +L+ +P ++ G+
Sbjct: 120 QKADQYAEEGAYKGVERMHLLAGFGLSFMLALIVTISFAVGSNTIKGLLDLIPEFIQHGL 179
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLS 246
+ ++ A+G+AM+ ++ ++V P+F LGF L A +L + + ++G A I +N+
Sbjct: 180 SVATGIIPALGFAMLARLLINKQVAPYFFLGFVLMAYFKLPVTGVAILGAITAVIVVNIM 239
Query: 247 K--KGGNGGNAAGSADPIGDILEDY 269
KG N S + I D ED+
Sbjct: 240 NYAKGKNETIQTTSGEVIDDD-EDF 263
>ref|ZP_00602811.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN10956.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 262
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 41 GLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFA 100
G++ G ++ G+I+GGT+Q+++LG A G + PD AII G +Q G+
Sbjct: 41 GILMGDIKTGLIVGGTVQLMSLGVAGFGGSSVPDYG----TCAIIATAFG--SQLGVEAG 94
Query: 101 YSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPA 160
+ +P+ + G+ L +IV+ L+ +V + A + F + ++ + GL A+P
Sbjct: 95 LAIGLPVGMLGVQLDVIVKILNGFVVRKSQEYANKREFKKMNSVLWLGPIFFGLSAAIPV 154
Query: 161 ALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFAL 220
+ V + SAV VL+ +PNW +G+ + G M+ AVG AM++ M T + +GF L
Sbjct: 155 FIAVTLGQSAVNYVLDVLPNWFMDGLTLAGKMLPAVGIAMLLRFMPTGRYISYLLVGFFL 214
Query: 221 AAISQLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSADPIGDILED 268
AA ++ +I +IG A+AF + ++K +AG++D +G I ED
Sbjct: 215 AAFLKVPIIGAAIIGFALAFNVYHRAEKDAQITASAGASD-VGFIGED 261
>ref|ZP_02426829.1| hypothetical protein CLORAM_00206 [Clostridium ramosum DSM 1402]
gb|EDS20113.1| hypothetical protein CLORAM_00206 [Clostridium ramosum DSM 1402]
Length = 254
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
AILV ++A F LE + + +P+V L+GLV G + G+ +G TL++ +G I
Sbjct: 3 QAILVGLVALFGYLEVVFGNSMIQRPIVMGPLVGLVLGDFKTGLEVGATLELAFMGSVAI 62
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLT-MIVRTLSTALV 126
GAA+ P+ + + +G+ T+ A + ++P+A L +T T+ L+
Sbjct: 63 GAALPPEITAGGLLGTAFAISTGNGTEA----ALALSLPIATISLLITNAFFLTIRAYLL 118
Query: 127 HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGM 186
H D A GN G+ R H I+ L + +AV A V VQ++L +P+++N+G+
Sbjct: 119 HKSDSYAVNGNVKGVNRMHIISSLSWPIFMAVLMAGSFYVGGPTVQAILEMIPDFVNDGL 178
Query: 187 QIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+ ++ A+G+A++ +M+ ++V PFF LGF L+A ++
Sbjct: 179 SVATGILPALGFALLASMLINKKVAPFFLLGFVLSAYLEM 218
>ref|ZP_01967021.1| hypothetical protein RUMTOR_00563 [Ruminococcus torques ATCC 27756]
gb|EDK25667.1| hypothetical protein RUMTOR_00563 [Ruminococcus torques ATCC 27756]
Length = 263
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 139/271 (51%), Gaps = 14/271 (5%)
Query: 4 ISIISAILVVIIAFFAGLEG----ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQM 59
+ +I IL+VI+A + ++ +L F + +++ GL+ G + G+++GGT Q+
Sbjct: 1 MEVIQNILIVILAGYMTVDQNGPVVLSWFSVIVGMIS----GLIMGDMNTGLMIGGTFQL 56
Query: 60 LALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR 119
++LG A +G A AP+ LA++ I V++G G+ A + +P+ + + L ++VR
Sbjct: 57 MSLGVAALGGASAPNYGLATIIGTFIAVRTG----TGVDAAIAVGLPVGLLAIQLEVVVR 112
Query: 120 TLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMP 179
+ + H EG + + +I +L L+ +P ++V + V+ +L +P
Sbjct: 113 IILNFVAHKMQTDNNEGKWKTMNMEAWIGPILCSLQTIIPTVIVVCFGANVVELILEVIP 172
Query: 180 NWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA 239
W+ G+ I M+ VG M++ M ++ PF +GF L+A + ++ + +IG A A
Sbjct: 173 EWVTNGLSIAAGMLPVVGIGMLMRYMPVKKFLPFILVGFVLSAYLGVPVLGIAIIGFAAA 232
Query: 240 FIYL--NLSKKGGNGGNAAGSADPIGDILED 268
F Y ++K AA AD +GD ++
Sbjct: 233 FWYFTTEINKADAVTMAAAEHADEMGDDFDE 263
>ref|YP_001338417.1| putative PTS permease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gb|ABR80150.1| putative PTS permease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 259
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 129/242 (53%), Gaps = 5/242 (2%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G ++ GVI+G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTA-IPLAVAGLFLTMIVRTLSTA 124
++GA++ PD + + SG T+ + A + L + ++L M + LS
Sbjct: 61 SVGASIPPDVVTGGILGVAFAITSGAGTETALLLGLPIATLTLILKNIYLGMFIPMLS-- 118
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
D A + GIER H IA L +A + V ++AV+S+L+ +P ++
Sbjct: 119 --QKADGYAERADLRGIERMHLIAGFGLSLMLAAVVTVSFLVGSNAVKSLLDTIPEFIKH 176
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLN 244
G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G +A + +N
Sbjct: 177 GLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVN 236
Query: 245 LS 246
++
Sbjct: 237 VT 238
>ref|ZP_02866386.1| hypothetical protein CLOSPI_00166 [Clostridium spiroforme DSM 1552]
gb|EDS75656.1| hypothetical protein CLOSPI_00166 [Clostridium spiroforme DSM 1552]
Length = 273
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 20/276 (7%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQ----MHQPLVACTLIGLVTGHLEAGVILGGTLQ 58
D++II A+LV I+AF G+ DQF ++QP+V C +IG + G + GV++GG Q
Sbjct: 2 DVNIIQALLVFIVAFIMGI----DQFSFLESLYQPIVTCPIIGAILGDFQLGVVVGGAYQ 57
Query: 59 MLALGWANIGAAVAPDAALASVAAAIIMVK-SGDFTQKGITFAYSTAIPLAVAGLFLTMI 117
++ +G IG A P+A L + A + V + + T G+ A AIP AV G + +
Sbjct: 58 LIQIGSMPIGGAQPPNAILGGIMATVFAVSLNMEATADGVGAAMGLAIPFAVFGQYAVTL 117
Query: 118 VRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQG--LRIAVPAALLVAVPTSAVQSVL 175
T+++ + D+ AA + GI + + + + G I A L V
Sbjct: 118 TFTIASGFMAKADECAANADVKGIRNINLLEMAILGTLFGILAVAGLYGGTALGDVLKEF 177
Query: 176 NAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAI-------SQLTL 228
+ +W+ G+ G + VG+A+++ +M + E+W F GFA++ I S TL
Sbjct: 178 SYDYSWVMAGLDAAGGAMKFVGFAILMKVMMSGEMWGFLLAGFAMSVICSANPSTSGATL 237
Query: 229 IAMGVIGVAIA-FIYLNLSKKGGN-GGNAAGSADPI 262
+ +G AIA + +L +K N G N G +D I
Sbjct: 238 LLCAFVGAAIAIYDFLIHTKIKSNVGTNTGGESDGI 273
>ref|ZP_00604663.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN09008.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 257
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 5/254 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
LVV+ FF + + QP+VA L GL+ G ++ G+ +GGTLQ++ LG +
Sbjct: 5 QTFLVVLYGFFINWDKEGPKIGTSQPVVAGFLTGLIMGDIQTGLYIGGTLQLMTLGITSF 64
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
G A PD A++ + + + GIT A IP+A+ + L ++ + +
Sbjct: 65 GGASVPDYQTAALIGTYLAISTNQDASIGITLA----IPVAMLIVQLDVLKWSTNIFFQQ 120
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
+K A + ++ +E ++A + +P L V + + V S +N +P W+ G++
Sbjct: 121 KAEKFAQKEDYQKLEWMQYLASINTSFVSGIPVLLTVILGPTLVGSAINYIPEWVTGGLK 180
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI-YLNLS 246
+ G ++ AVG M++ + T++ + + +GF LA Q+ ++ + ++G AIA I Y N S
Sbjct: 181 VAGGLLPAVGIGMLLKYLPTKDYFAYLLVGFVLAVYFQIPILGISLLGAAIALIVYKNRS 240
Query: 247 KKGGNGGNAAGSAD 260
A G D
Sbjct: 241 NNTQVAPAATGGFD 254
>ref|ZP_02328531.1| PTS system, IIC component [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 259
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 123/248 (49%), Gaps = 4/248 (1%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M+ I +L+ + + FA +G F +P +A GLV G ++ G+I+GGTL +L
Sbjct: 1 MTTIEWWQILLLTLYSAFAIYDGNNTTFGFVKPTMAGFFAGLVLGDIQTGMIVGGTLNLL 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
LG N G A PD ++ V SG KG F + AIP+ + + L + R
Sbjct: 61 VLGVGNFGGASIPDYMTGALLGTTFAVLSG----KGAEFGATLAIPIGLLMVQLDVFARF 116
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+T H +K GN R + L+ L +P L + ++ VQ ++ +P
Sbjct: 117 TNTFFQHRAEKLVESGNLKKASRMNLWGLVPTSLSRMIPVFLALVFGSAFVQQIVEGIPA 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+Q G ++ A+G A+++ + + + F +GF +AA +++++ ++G+A+A
Sbjct: 177 WLMSGLQTAGKILPALGIAILLRYLPVKANFAFLIIGFFIAAYLKVSVLGAALVGLALAM 236
Query: 241 IYLNLSKK 248
I+ + K
Sbjct: 237 IFFQMFSK 244
>ref|ZP_00712467.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B171]
ref|ZP_00713930.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B7A]
ref|ZP_00715241.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B7A]
ref|ZP_00715485.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B7A]
ref|ZP_00729965.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli E22]
ref|YP_001464284.1| PTS system sorbose-specific iic component [Escherichia coli
E24377A]
gb|ABV18302.1| PTS system sorbose-specific iic component [Escherichia coli
E24377A]
Length = 249
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 32 QPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI-GAAVAPDAALASVAAAIIMVKSG 90
QP+V +GL+ G++ A +I+G +Q++ LG + G V D ALA+ A I VK+
Sbjct: 31 QPVVVAVFVGLLLGNMPAAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACIAIPIAVKA- 89
Query: 91 DFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALL 150
A + AIP V G+FL + RTL+ A VH DK A N + I R F+
Sbjct: 90 ---NMDPNLAIALAIPFGVIGVFLDQLRRTLNAAWVHMADKHAETANMSAIMRCAFLYPA 146
Query: 151 LQGLRIAVPAALLV-AVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATRE 209
L GL + P + V+S L MP+WL +I G ++ A+G+A+ I ++ +
Sbjct: 147 LLGLVLRFPVVFAANYFGQNVVESFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKS 206
Query: 210 VWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGG 250
+ P+F GF ++ ++AM + G +AF+ L+K G
Sbjct: 207 LLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIKGLAKNEG 247
>ref|YP_848229.1| PTS system, mannose/fructose/sorbose family, IIC component
[Listeria welshimeri serovar 6b str. SLCC5334]
emb|CAK19444.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 267
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 10/271 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D+++ IL+VI+A L+ + ++ P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A PD ++ + V SG + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGASIPDFTTGAIVGTVFAVLSGQDAE----FAIGLAIPVGLLMVQLDILARFTN 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ V +LN +P WL
Sbjct: 118 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQGVVDFILNEIPEWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 178 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 237
Query: 243 LNLSKK-----GGNGGNAAGSADPIGDILED 268
+ K G NG G + G+ ED
Sbjct: 238 FKQNFKNQVAVGLNGAALVGEENEDGE-YED 267
>ref|YP_131817.1| putative permease protein [Photobacterium profundum SS9]
emb|CAG22017.1| putative permease protein [Photobacterium profundum SS9]
Length = 254
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 4/255 (1%)
Query: 8 SAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
A+LV + AFF G++ +H+PL+ ++GL+ G ++ G+I G TL++ LG
Sbjct: 4 EAMLVAVWAFFCGIDKYDVALNIHRPLITGPVVGLIMGDMQIGLIAGATLELAWLGLVPN 63
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
A PD L ++AA V +G + A +P+AV L + +++ +
Sbjct: 64 AGAQPPDVTLGTIAAVAFAVMTGQTAE----VAMGVGMPIAVLMQMLVIGFFAVTSFTMG 119
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQ 187
DK A +G+ GI+R L L+ L +V A + V A + P L EG+
Sbjct: 120 KADKYAEQGDSDGIDRLLISTLGLRALLYSVVAFITVYFGEHAATWIDENAPKVLLEGLG 179
Query: 188 IGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSK 247
IG MV A+G+AM++ +M ++EV F +GF + QL ++A+ ++G + A +Y S
Sbjct: 180 IGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLQLPIMAVAILGASAAALYFFFSG 239
Query: 248 KGGNGGNAAGSADPI 262
G + D I
Sbjct: 240 NGNSNNQDKEFEDGI 254
>ref|YP_536600.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
gb|ABE00517.1| PTS system, mannose-specific IIC component [Lactobacillus
salivarius UCC118]
Length = 266
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Query: 7 ISAILVVIIA-FFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+ ILV++IA + A G +Q + P+ L+GLV G++ G+++GGTLQ+++LG A
Sbjct: 5 LQDILVILIAAYMAWDNGTGNQITGNWPVTIGLLVGLVMGNVSVGLVIGGTLQLMSLGVA 64
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
IG + P+ +A++ + + +++G T I + +P+ + L L ++++ ++
Sbjct: 65 GIGGSSVPEYGVATIVSIYLAIRTGASTGTAI----AVGLPVGMLTLQLDVVLKIINNFY 120
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
H + E F I+ ++ ++ L+ +P L+V T V+ +LN +P W G
Sbjct: 121 AHWAQRLLHEKKFKKIDAVFYLTVVTWMLKYVIPVTLVVLFGTPIVKLILNVIPTWFTNG 180
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAA 222
+QI G M+ VG M++ M ++ + +GF AA
Sbjct: 181 LQIAGGMLPVVGIGMLLRYMPVKKYLTYLIIGFVAAA 217
>ref|YP_245827.1| PTS system, IIC component [Bacillus cereus E33L]
gb|AAY60489.1| PTS system, IIC component [Bacillus cereus E33L]
Length = 258
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M + +L+ + + FA +G F +P +A GL+ G ++ G+I+GGTL +L
Sbjct: 1 MVSVEWWQIVLITLYSGFAIYDGNNTTFGFVKPTMAGFFAGLILGDIQTGLIVGGTLNLL 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
LG N G A PD ++ V SG + G T A IP+ + + L ++ R
Sbjct: 61 VLGVGNFGGASIPDYMTGALLGTAFTVMSGQDAKFGATLA----IPIGLLMVQLDVLARF 116
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+T H +K AEG F + ++ L +P L + VQ++++ +P
Sbjct: 117 TNTFFQHKAEKLVAEGKFKKASYMNLWGIVPTSLSRMIPVFLALVFGAKFVQAIVDNIPK 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAF 240
WL G+Q+ G ++ A+G A+++ + ++ F +GF LAA ++ ++ + +IG+A+A
Sbjct: 177 WLMGGLQVAGGLLPALGIAILLKYLPIKQNIAFLIIGFFLAAYLKVPVLGVALIGLAMAI 236
Query: 241 IYLNLSKKGGN 251
IY K +
Sbjct: 237 IYFQTFMKDSD 247
>ref|YP_001572025.1| hypothetical protein SARI_03042 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gb|ABX22883.1| hypothetical protein SARI_03042 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 259
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 132/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG T+ + +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSGAGTETVLLLG----LPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP----TSAVQSVLN 176
L H D A GN GIER H L+ G+ +++ ++V V + V+ L+
Sbjct: 113 FIPLLCHKADAYAEVGNTRGIERMH----LISGIGLSLTLGIIVTVSYLAGVNVVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFILMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|ZP_02076878.1| hypothetical protein EUBDOL_00671 [Eubacterium dolichum DSM 3991]
gb|EDP11493.1| hypothetical protein EUBDOL_00671 [Eubacterium dolichum DSM 3991]
Length = 564
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 4 ISIISAILVVIIAFFAGLEGILDQFQMHQPLVAC--------TLIGLVTGHLEAGVILGG 55
I I+SA+LV ++A + Q+ P+ C TL+GL G G++ G
Sbjct: 9 IMILSAVLVALLA-------TMGQWWFFGPVTKCLVYPLTTGTLVGLFMGDPMTGMMAGA 61
Query: 56 TLQMLALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLT 115
+Q++ LGW + G + + +A + + + SG +TFA IP ++ GL L
Sbjct: 62 NIQLIYLGWISAGGTMPSNTIVAGIFGTAMTILSGADPTMAVTFA----IPFSMFGLLLN 117
Query: 116 MIVRTLSTALVHAGDKAAAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSV 174
+ T++ A +H DK +GN G+ +F+ + + + +PA LLV +S +
Sbjct: 118 QVYMTVNAAWIHQADKFLEKGNLRGVRLMNFVPSFFMAFILYGIPAFLLVVSGSSWATDL 177
Query: 175 LNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVI 234
+NA+P + +Q+ G ++ A+G AM++N + +++ P+F GF L S L L A+ +
Sbjct: 178 INAVPESVISALQVVGGIMPALGIAMLLNYLGKKKLIPWFFGGFFLTVYSGLGLTAISIF 237
Query: 235 GVAIAFI-YLNLSKK 248
IA I YLN + K
Sbjct: 238 SAIIALIMYLNSNDK 252
>ref|ZP_02073681.1| hypothetical protein CLOL250_00423 [Clostridium sp. L2-50]
gb|EDO58882.1| hypothetical protein CLOL250_00423 [Clostridium sp. L2-50]
Length = 269
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 9/242 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
I I+ IL+ +I E +L + +P+V L+GLV G+L AG+I+G T+++ +
Sbjct: 4 QIMILKTILIFLIGLLGYSEWLLGTSCLQRPIVLGPLVGLVMGNLPAGIIMGATMELALV 63
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFL-TMIVRTL 121
G +IGA PD +V + ++SG G A IP+A L T I + L
Sbjct: 64 GAVSIGAYNPPDLIAGTVLGVSLAIQSG----AGAETALVLGIPIATVMLAANTGICQPL 119
Query: 122 STALVHAGDKAAAEGNFAGIERFHFIALLLQGLR--IAVPAALLVAVPTSAVQSVLNAMP 179
++H D+ A +GN R + IA LQ L + +P A + AV ++L +P
Sbjct: 120 MLVMIHKCDRDAEKGNIRAFNRDYLIAGYLQNLFGIVCIPLAFYFG--SDAVTALLGKIP 177
Query: 180 NWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA 239
++ GM I A++ A+G+AM+ M R+V PFF LGF L + ++ + + V I
Sbjct: 178 EFVQSGMDITAALLPALGFAMLAQQMMNRKVAPFFFLGFFLVSYLGISTTGVAIFAVLIV 237
Query: 240 FI 241
I
Sbjct: 238 II 239
>ref|ZP_02681348.1| hypothetical protein Sentericaenterica_27015 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
ref|ZP_02698451.1| hypothetical protein Saentericaenterica_10523 [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
Length = 259
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+I A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MIEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEMGDTRGIERMH----LISGIGLSLTLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|NP_471443.1| hypothetical protein lin2109 [Listeria innocua Clip11262]
emb|CAC97339.1| lin2109 [Listeria innocua]
Length = 272
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 22/250 (8%)
Query: 22 EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVA 81
E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +IGA++ P+ S+
Sbjct: 20 EYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSIGASIPPEIISGSIL 79
Query: 82 AAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS-----TALVHAGDKAAAEG 136
+ +G+ T A + IP+A L ++V+ L VH DK A EG
Sbjct: 80 GTAFAIATGEST----AVALALGIPIAS----LVLVVKNLCFIFVLPYFVHKADKYALEG 131
Query: 137 NFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNAMPNWLNEGMQIGGA 191
N GI R LL G L I +P ++VA V + +Q+VL+A+P ++ G+ I
Sbjct: 132 NSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDAIPAFVIAGLGIATG 187
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
++ A G+A+++ +M ++ FF GFALA ++ + + + G +A I + +
Sbjct: 188 LLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFGACLALILTGYATLKND 247
Query: 252 GGNAAGSADP 261
G + +P
Sbjct: 248 NGPTNNNTEP 257
>ref|YP_850218.1| PTS system, mannose-specific IIC component [Listeria welshimeri
serovar 6b str. SLCC5334]
emb|CAK21439.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 272
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 22/250 (8%)
Query: 22 EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVA 81
E + + +PLV CTL GL+ G ++ G+++G TL++ +G +IGA++ P+ S+
Sbjct: 20 EYLFGSSMLSRPLVTCTLAGLIMGDVQMGIVMGATLELAFVGSFSIGASIPPEIISGSIL 79
Query: 82 AAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS-----TALVHAGDKAAAEG 136
+ +G+ T A + IP+A L ++V+ L VH DK A EG
Sbjct: 80 GTAFAIATGEST----AVALALGIPIAS----LVLVVKNLCFIFVLPYFVHKADKYALEG 131
Query: 137 NFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNAMPNWLNEGMQIGGA 191
N GI R LL G L I +P ++VA V + +Q+VL+A+P ++ G+ I
Sbjct: 132 NSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDAIPAFVIAGLGIATG 187
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
++ A G+A+++ +M ++ FF GFALA ++ + + + G +A I + +
Sbjct: 188 LLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFGACLALILTGYATLKND 247
Query: 252 GGNAAGSADP 261
G + +P
Sbjct: 248 NGPTKNNTEP 257
>ref|NP_603527.1| PTS system, IIC component [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gb|AAL94826.1| PTS system, IIC component [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 259
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 130/243 (53%), Gaps = 5/243 (2%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ +IAF A E L + +P+V GLV G ++AG+I+G TL++ +G
Sbjct: 1 MLQALLLGLIAFVAQSEFALGTSLISRPIVTGLFTGLVMGDIKAGLIMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMI-VRTLSTA 124
+IG ++ PD V I+ V ++ GI A+P+A L L + + L
Sbjct: 61 SIGGSIPPDV----VTGGILGVAFSIASKTGIETVLLLALPIATFTLILKNVYLGLLIPM 116
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
L H D A EGN GIER ++ L +A + ++ + S+LNA+P+++
Sbjct: 117 LSHKADIYAEEGNTKGIERMQILSGLGLSFLLAAIVFFSYLLGSNVISSILNAIPDFIQR 176
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLN 244
G+ + ++ A+G+AM+ ++ + V P+ LGFA+A SQ+ L + ++G ++ I +N
Sbjct: 177 GLAVTTGIIPALGFAMLAKLLINKTVIPYLFLGFAIAIYSQIPLTGIAIMGAILSVIIVN 236
Query: 245 LSK 247
++
Sbjct: 237 ITN 239
>ref|ZP_02684385.1| hypothetical protein Salmentericaenterica_15107 [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 259
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEMGDTRGIERMH----LISGIGLSLTLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|YP_001591810.1| hypothetical protein SPAB_05709 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
ref|ZP_02562162.1| hypothetical protein Sente_18222 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
ref|ZP_02565106.1| hypothetical protein Senten_04793 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
ref|ZP_02657953.1| hypothetical protein Sententerica_18059 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
ref|ZP_02659728.1| hypothetical protein Senteenterica_00700 [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
ref|ZP_02833007.1| hypothetical protein Salentericaenterica_16586 [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gb|ABX70977.1| hypothetical protein SPAB_05709 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 259
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEVGDTRGIERMH----LISGIGLSLTLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|YP_805667.1| Mannose-specific PTS system component IICD [Lactobacillus casei
ATCC 334]
gb|ABJ69225.1| Mannose-specific PTS system component IICD [Lactobacillus casei
ATCC 334]
Length = 532
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 6 IISAILVVIIA------FFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQM 59
++SAILV ++A FFA + M PL L+G+ G G++ G +Q+
Sbjct: 2 LLSAILVALLAIISQWWFFAPITRC-----MTYPLTTGLLVGIFMGDPMLGMLAGANIQL 56
Query: 60 LALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR 119
+ LGW N G + + +A + + + + SG + +TFA IP ++ GL + I +
Sbjct: 57 VYLGWINAGGVMPSNTMVAGIYGSALTILSGANPKLAVTFA----IPFSLLGLLMVQIYQ 112
Query: 120 TLSTALVHAGDKAAAEGNFAGIERFHFI-ALLLQGLRIAVPAALLVAVPTSAVQSVLNAM 178
T+++ VH DKA EG + I +++ + ++ + +PA LV S S+++A+
Sbjct: 113 TVNSFWVHRADKALDEGKVSQIRFLNYVPSFIVAFIVYGIPAFCLVMFGKSWTTSLISAI 172
Query: 179 PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAI 238
P +++ G ++ A+G AM++N + RE+ FF +GF L +L ++A+ + I
Sbjct: 173 PAQFTTALEVVGGLMPALGIAMLLNYLGKRELNAFFIIGFFLTVYLKLDIMAIAIFSACI 232
Query: 239 AF-IYLNLSKKGGNGGNAAGSADPI 262
AF +++ S+ AA +
Sbjct: 233 AFLVFIAQSRSNKETATAASPKKKV 257
>ref|YP_803726.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
gb|ABJ67284.1| mannose-specific PTS system component IIC [Pediococcus pentosaceus
ATCC 25745]
Length = 279
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 20/244 (8%)
Query: 7 ISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWAN 66
++AIL+ +IA E L + +PLV CTL GL+TG++ G+I+G TL++ +G +
Sbjct: 5 VTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFVGSFS 64
Query: 67 IGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS---- 122
IGA++ P+ SV + +G T +T IP+A L ++++ L
Sbjct: 65 IGASIPPEIISGSVLGTAFAIAAGKSTAVALTL----GIPIAS----LVLVIKNLCFIFI 116
Query: 123 -TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVP----TSAVQSVLNA 177
VH D AAEG+ G+ R + + + +P L+V + + ++S L
Sbjct: 117 LPYFVHKADAYAAEGDGRGLSRMNVLGGFFS---VNLPIGLVVGISYLLGSPVIKSFLAI 173
Query: 178 MPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVA 237
+P ++ G+ I ++ A G+A+++ MM + FF LGFALA + + + + + G
Sbjct: 174 IPKFIINGLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGAC 233
Query: 238 IAFI 241
+A +
Sbjct: 234 LALV 237
>ref|YP_219376.1| putative PTS permease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gb|AAX68295.1| putative PTS permease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 259
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGMSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEVGDTRGIERMH----LISGIGLSLMLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|ZP_01944424.1| PTS system, IIC component [Listeria monocytogenes HPB2262]
gb|EBA36754.1| PTS system, IIC component [Listeria monocytogenes HPB2262]
Length = 272
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 22 EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVA 81
E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +IGA++ P+ S+
Sbjct: 20 EYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSIGASIPPEIISGSIL 79
Query: 82 AAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS-----TALVHAGDKAAAEG 136
+ +G+ T A + IP+A L ++V+ L VH DK A EG
Sbjct: 80 GTAFAISTGEST----AVALALGIPIAS----LVLVVKNLCFIFVLPYFVHKADKYALEG 131
Query: 137 NFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNAMPNWLNEGMQIGGA 191
N GI R LL G L I +P ++VA V + +Q+VL+A+P ++ G+ I
Sbjct: 132 NSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDAIPAFVITGLGIATG 187
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
++ A G+A+++ +M ++ FF GFALA ++ + + + +A I + +
Sbjct: 188 LLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGIAIFAACLALILTGYATLKND 247
Query: 252 GGNAAGSADP 261
G + +P
Sbjct: 248 NGPKNSNTEP 257
>ref|NP_463396.1| putative PTS permease [Salmonella typhimurium LT2]
ref|ZP_02338450.1| hypothetical protein Sentent_06310 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
ref|ZP_02572437.1| hypothetical protein Sententer_01000006_0100007839 [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
ref|ZP_02668894.1| hypothetical protein Senterienterica_20134 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
ref|ZP_02673992.1| hypothetical protein Sentericenterica_19014 [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gb|AAL23355.1| putative PTS permease [Salmonella typhimurium LT2]
Length = 259
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEVGDTRGIERMH----LISGIGLSLMLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNMPK 239
>ref|ZP_02351573.1| hypothetical protein Sententeri_17205 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
Length = 259
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 21/251 (8%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 61 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 112
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 113 FIPLLCHKADAYAEVGDTRGIERMH----LISGIGLSLMLGIIVTVSYLAGVNMVKGFLD 168
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 169 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 228
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 229 IVAVVMVNIPK 239
>ref|YP_014617.1| PTS system, IIC component [Listeria monocytogenes str. 4b F2365]
ref|ZP_00231891.1| PTS system, IIC component [Listeria monocytogenes str. 4b H7858]
gb|AAT04794.1| PTS system, IIC component [Listeria monocytogenes str. 4b F2365]
gb|EAL08271.1| PTS system, IIC component [Listeria monocytogenes str. 4b H7858]
Length = 272
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 22 EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVA 81
E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +IGA++ P+ S+
Sbjct: 20 EYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSIGASIPPEIISGSIL 79
Query: 82 AAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS-----TALVHAGDKAAAEG 136
+ +G+ T A + IP+A L ++V+ L VH DK A EG
Sbjct: 80 GTAFAISTGEST----AVALALGIPIAS----LVLVVKNLCFIFVLPYFVHKADKYALEG 131
Query: 137 NFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNAMPNWLNEGMQIGGA 191
N GI R LL G L I +P ++VA V + +Q+VL+A+P ++ G+ I
Sbjct: 132 NSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDAIPAFVITGLGIATG 187
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
++ A G+A+++ +M ++ FF GFALA ++ + + + +A I + +
Sbjct: 188 LLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFAACLALILTGYATLKND 247
Query: 252 GGNAAGSADP 261
G + +P
Sbjct: 248 NGPKNSNTEP 257
>ref|ZP_02235526.1| hypothetical protein DORFOR_02412 [Dorea formicigenerans ATCC
27755]
gb|EDR45811.1| hypothetical protein DORFOR_02412 [Dorea formicigenerans ATCC
27755]
Length = 266
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 136/274 (49%), Gaps = 17/274 (6%)
Query: 4 ISIISAILVVIIAFFAGLEG----ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQM 59
+++I IL+VI+A + ++ +L F + +++ GL+ G + G+++GGT Q+
Sbjct: 1 MTVIQDILIVILAGYMTIDQNGPVVLSWFSVIVGMIS----GLIMGDMNTGLVIGGTFQL 56
Query: 60 LALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR 119
++LG A +G A AP+ LA++ I V++G G A + +P+ + + L ++VR
Sbjct: 57 MSLGVAALGGASAPNYGLATIIGTFIAVRTG----TGTDAALAVGLPVGLLAIQLEVVVR 112
Query: 120 TLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMP 179
++ + H G + + R ++ + L+ +P ++V + V +L +P
Sbjct: 113 IVNNFVAHKMQNDNNAGKWGRMNREAWLGPAICSLQTVIPTIIVVCFGANVVNFILKFIP 172
Query: 180 NWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA 239
W+ G+ I M+ VG M++ M ++ PF +GF L+A + ++ + ++G A A
Sbjct: 173 EWVTNGLSIAAGMLPVVGIGMLMRYMPVKKFLPFILIGFVLSAYLNVPVLGIAIVGFAAA 232
Query: 240 FIYLNLSKKGGNGGNAAGSA-----DPIGDILED 268
F Y + + A A + +GD ++
Sbjct: 233 FWYFTTELRKSDATEAVTVAANTVTEEMGDDFDE 266
>ref|NP_465525.1| hypothetical protein lmo2001 [Listeria monocytogenes EGD-e]
ref|ZP_00234230.1| PTS system, IIC component [Listeria monocytogenes str. 1/2a F6854]
ref|ZP_01930624.1| PTS system, IIC component [Listeria monocytogenes FSL N3-165]
ref|ZP_01933182.1| PTS system, IIC component [Listeria monocytogenes F6900]
ref|ZP_01934346.1| PTS system, IIC component [Listeria monocytogenes J0161]
ref|ZP_01938715.1| PTS system, IIC component [Listeria monocytogenes J2818]
ref|ZP_01940879.1| PTS system, IIC component [Listeria monocytogenes 10403S]
emb|CAD00079.1| lmo2001 [Listeria monocytogenes]
gb|EAL05911.1| PTS system, IIC component [Listeria monocytogenes str. 1/2a F6854]
gb|EBA21494.1| PTS system, IIC component [Listeria monocytogenes J0161]
gb|EBA23362.1| PTS system, IIC component [Listeria monocytogenes 10403S]
gb|EBA25624.1| PTS system, IIC component [Listeria monocytogenes J2818]
gb|EBA31380.1| PTS system, IIC component [Listeria monocytogenes FSL N3-165]
gb|EBA33916.1| PTS system, IIC component [Listeria monocytogenes F6900]
Length = 272
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 22 EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVA 81
E + + +PLV CTL GL+ G ++ G+I+G TL++ +G +IGA++ P+ S+
Sbjct: 20 EYLFGSSMLSRPLVTCTLAGLIMGDVQMGIIMGATLELAFVGSFSIGASIPPEIISGSIL 79
Query: 82 AAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS-----TALVHAGDKAAAEG 136
+ +G+ T A + IP+A L ++V+ L VH DK A EG
Sbjct: 80 GTAFAISTGEST----AVALALGIPIAS----LVLVVKNLCFIFVLPYFVHKADKYALEG 131
Query: 137 NFAGIERFHFIALLLQG-LRIAVPAALLVA----VPTSAVQSVLNAMPNWLNEGMQIGGA 191
N GI R LL G L I +P ++VA V + +Q+VL+A+P ++ G+ I
Sbjct: 132 NSRGISRMQ----LLGGFLSINLPIGIIVATSYLVGSPVIQNVLDAIPAFVITGLGIATG 187
Query: 192 MVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKGGN 251
++ A G+A+++ +M ++ FF GFALA ++ + + + +A I + +
Sbjct: 188 LLPAYGFALLLKLMVNKKNAVFFVFGFALAVYLKVPVTGVAIFAACLALILTGYATLKND 247
Query: 252 GGNAAGSADP 261
G + +P
Sbjct: 248 NGPKNTNTEP 257
>ref|YP_001570206.1| hypothetical protein SARI_01159 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gb|ABX21064.1| hypothetical protein SARI_01159 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 256
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+ A LV I AF G++ +H+PL+ ++GL+ G +E G+I G TL++ LG
Sbjct: 2 LFEATLVAIWAFLCGIDKYDVALNIHRPLITGPIVGLIMGDMEVGLIAGATLELAWLGLV 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
A PD + ++AA V +G + A +P+AV + + ++
Sbjct: 62 PNAGAQPPDVTMGTIAAVAFAVMTGQSPE----VAMGVGMPIAVLMQMIVIGFFAMTAFT 117
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
+ D+ A + + AGI R L+ + + + A + V A + P L EG
Sbjct: 118 MGKADRCAEQADTAGISRLLVGTLITRSMLYFIIAFVTVYFGEHAAAWIDENTPTVLLEG 177
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ IG MV A+G+AM++ +M ++EV F +GF + +L ++A+ ++G +IA +Y
Sbjct: 178 LGIGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLKLPIMAVAILGASIALLYYFF 237
Query: 246 SKKGGNGGNAAGSADPIGD 264
S K N N A+ D
Sbjct: 238 SGK--NSNNNTKQAEDFED 254
>ref|ZP_02135139.1| PTS system, N-acetylgalactosamine-specific IIC component [Vibrio
fischeri MJ11]
gb|EDQ23738.1| PTS system, N-acetylgalactosamine-specific IIC component [Vibrio
fischeri MJ11]
Length = 256
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 4/249 (1%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+ A LV + AFF G++ +H+PL+ ++GL+ G ++ G+I G TL++ LG
Sbjct: 2 LFEASLVAVWAFFCGIDKYDVALNIHRPLITGPVVGLIMGDMQVGLIAGATLELAWLGLV 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
A PD + ++AA V +G + A +P+AV L + +++
Sbjct: 62 PNAGAQPPDVTMGTIAAVAFAVMTGQSPE----VAMGVGMPIAVLMQMLVIGFFAMTSFT 117
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
+ DK A E N GI+ + ++ + AV A L V + P L EG
Sbjct: 118 MGKADKYAEEANTNGIDFLLLSTITMRSMLYAVIAFLTVYFGEHGAAWIDANAPKTLLEG 177
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ IG MV A+G+AM++ +M ++EV F +GF + QL ++A+ ++G + A +Y
Sbjct: 178 LGIGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLQLPIMAVAILGASAAALYYFF 237
Query: 246 SKKGGNGGN 254
S G N
Sbjct: 238 SGNGNKNSN 246
>ref|YP_206960.1| PTS system, N-acetylgalactosamine-specific IIC component [Vibrio
fischeri ES114]
gb|AAW88072.1| PTS system, N-acetylgalactosamine-specific IIC component [Vibrio
fischeri ES114]
Length = 256
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 4/249 (1%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+ A LV + AFF G++ +H+PL+ ++GL+ G ++ G+I G TL++ LG
Sbjct: 2 LFEASLVAVWAFFCGIDKYDVALNIHRPLITGPVVGLIMGDMQIGLIAGATLELAWLGLV 61
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
A PD + ++AA V +G + A +P+AV L + +++
Sbjct: 62 PNAGAQPPDVTMGTIAAVAFAVMTGQSPE----VAMGVGMPIAVLMQMLVIGFFAMTSFT 117
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
+ DK A E N GI+ + ++ + AV A L V + P L EG
Sbjct: 118 MGKADKYAEEANTNGIDFLLLSTITMRSMLYAVIAFLTVYFGEHGAAWIDANAPKTLLEG 177
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNL 245
+ IG MV A+G+AM++ +M ++EV F +GF + QL ++A+ ++G + A +Y
Sbjct: 178 LGIGAKMVPAIGFAMLLKIMWSKEVAGVFFIGFVMTTYLQLPIMAVAILGASAAALYYFF 237
Query: 246 SKKGGNGGN 254
S G N
Sbjct: 238 SGNGNKNSN 246
>ref|NP_816595.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO82665.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 249
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
Query: 30 MHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI-GAAVAPDAALASVAAAIIMVK 88
+ QPL A + GL TG L +++G +Q++ LG + G V D ALAS A I +
Sbjct: 29 LSQPLGAALVAGLATGKLSEAMVVGAGIQLVYLGVTSTPGGNVPSDPALASAIAIPIALG 88
Query: 89 SGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIA 148
G + + + A+P V G+F+ + RT++ VH DK A E N+ GI R F+
Sbjct: 89 VGMNAEAAV----ALAVPFGVLGVFMDQLRRTINATWVHMADKYAEELNYGGIYRAAFVY 144
Query: 149 LLLQGLRIAVPAALLVAVP---TSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMM 205
L G I P L+ A S V VL +P WL G ++ G ++ A+G+A+ I ++
Sbjct: 145 PALAGFLIRFP--LVFAANFFGQSVVNKVLEVIPAWLMHGFEVMGGILPALGFALTIMVI 202
Query: 206 ATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLN 244
+ + P+F +GF ++A+ ++G+ IAF+ N
Sbjct: 203 GKKNLIPYFLIGFVAVVYFGAEVMAVAILGICIAFLVRN 241
>ref|YP_001178283.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterobacter sp. 638]
gb|ABP62232.1| phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterobacter sp. 638]
Length = 258
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + I+AF AGL+ MH+P+V L+GL+ G L AG++ GGTL+++ +
Sbjct: 2 EISLLQAFALGILAFIAGLDMFNGLTHMHRPVVLGPLVGLILGDLHAGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVA-GLFLTMIVRTL 121
G A + A P+ + ++ + +G + A A+P AVA + +T + +
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTTFAISTGVKPE----VAVGVAVPFAVAVQMGITFLFSVM 117
Query: 122 STALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNW 181
S + D+ AA + AGIER +++ALL G+ + A L + ++ ++ +P
Sbjct: 118 SGVMARC-DRMAANADTAGIERVNYLALLALGIFYFLCAFLPIYFGAEHAKTAIDVLPAR 176
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTL 228
L +G+ + G ++ A+G+A+++ +M P+F LGF AA +L +
Sbjct: 177 LIDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKLPV 223
>ref|ZP_02420819.1| hypothetical protein ANACAC_03466 [Anaerostipes caccae DSM 14662]
gb|EDR96135.1| hypothetical protein ANACAC_03466 [Anaerostipes caccae DSM 14662]
Length = 263
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 6/248 (2%)
Query: 4 ISIISAILVVIIAFFAG-LEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
++ + A+ V I +FAG G + + QPLV IGL+ G + +++G ++++ +
Sbjct: 1 MNFVIAVFVGIWFWFAGGAPGYTFHYVLKQPLVMALPIGLLMGDVPQAMMIGAAIELVYV 60
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G + GA V D LA V A I +K G + A +P V G+FL + RT++
Sbjct: 61 GIISPGANVPADECLAGVIAIPIAMKIGADPATAVVLA----VPFGVLGVFLDQLRRTVN 116
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLV-AVPTSAVQSVLNAMPNW 181
H DK A G+ G+ R I + G + P + V+ LNAMP W
Sbjct: 117 ARWAHVADKYALAGDEKGLFRCAVIYPMAVGFLMRFPPVFIANYFGADVVEKFLNAMPQW 176
Query: 182 LNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI 241
+ G+ + G ++ A+G+A+++ ++ R + PF+ +G+ ++ +A V G+ IA +
Sbjct: 177 IIHGISVTGGVLPALGFAIILFVIGQRSLLPFYFMGYFAVQYLKINTMAAAVFGICIALV 236
Query: 242 YLNLSKKG 249
L + G
Sbjct: 237 ILFMKNDG 244
>ref|YP_001086757.1| PTS system, IIc component [Clostridium difficile 630]
ref|ZP_01805219.1| hypothetical protein CdifQ_04000325 [Clostridium difficile
QCD-32g58]
ref|ZP_02728766.1| PTS system, IIc component [Clostridium difficile QCD-37x79]
ref|ZP_02746985.1| PTS system, IIc component [Clostridium difficile QCD-63q42]
ref|ZP_02757656.1| PTS system, IIc component [Clostridium difficile QCD-76w55]
ref|ZP_02764771.1| PTS system, IIc component [Clostridium difficile QCD-97b34]
emb|CAJ67110.1| PTS system, IIc component [Clostridium difficile 630]
Length = 251
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 7/238 (2%)
Query: 17 FFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAA 76
F AGL G + PL +GL+ G + G+I+G +++M+ LG G + D
Sbjct: 17 FAAGLAGYTLFSTLKSPLFIGFSLGLLWGDVTTGMIVGASIEMVYLGMVAAGGNIPSDKC 76
Query: 77 LASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEG 136
LA++ A + +++G + A S A+PL V G+ + + RT + LVH DK A EG
Sbjct: 77 LAALIAIPVALQTGVNAE----VAVSIAVPLGVIGVLVNNLRRTGNAVLVHKADKYAEEG 132
Query: 137 NFAGIERFHFIALLLQGLRIAVPAALLVAV-PTSAVQSVLNAMPNWLNEGMQIGGAMVVA 195
N GI R + L+ G + P + VQS+L+ +P WL G+ + G ++ A
Sbjct: 133 NTKGIWRCATLYSLIFGFVLRFPIVFVCNFFGADLVQSLLDVIPQWLMNGLTVMGGILPA 192
Query: 196 VGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI--YLNLSKKGGN 251
+G+A I + + P F +GF + ++++ A + GV IA + ++ K+ G
Sbjct: 193 LGFATTIFTIGKNKFLPMFIIGFFMVQYFEISITAAAIFGVCIALLITFMKEDKRVGE 250
>ref|NP_814559.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO80629.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 263
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 126/251 (50%), Gaps = 5/251 (1%)
Query: 10 ILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGA 69
IL+ I AF A + ++ + QP +A + G++ G L+ G+++GGTLQ++ LG A G
Sbjct: 9 ILITIYAFIAINDSLISN-TLTQPAIAGMISGMIMGDLKTGLMVGGTLQLMRLGIAAFGG 67
Query: 70 AVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAG 129
A PD +V V SG KG + A+P+++ L L ++ R + L+H+
Sbjct: 68 ASVPDYFTGAVLGTAFAVISG----KGAEYGIGLAVPVSLLMLQLDVVARFCNVFLLHSV 123
Query: 130 DKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQIG 189
DKA + I R +L GL A+P L++ + V ++ + MP WL G++
Sbjct: 124 DKAIDKMQVKRIPRLVLSGSVLWGLSRAIPILLMLLAGDAVVTTITDNMPEWLMTGLKTA 183
Query: 190 GAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKKG 249
G ++ VG +++ + T++ P+ LGF LAA ++ ++ + ++G+ A +
Sbjct: 184 GGVLPVVGVGILLRYLPTKQYIPYLLLGFFLAAYLKVPMLGVSIVGMVAAMLVFKRDGAK 243
Query: 250 GNGGNAAGSAD 260
G+ D
Sbjct: 244 STTQATTGNGD 254
>ref|ZP_02278633.1| hypothetical protein LmonF_00285 [Listeria monocytogenes FSL
F2-515]
Length = 266
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 11/271 (4%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
D++I IL+VI+A L+ + ++ P++ TL G++ G + G+ +G TLQ++ L
Sbjct: 2 DLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVL 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G G A ++ + AI+ + + FA AIP+ + + L ++ R +
Sbjct: 62 GVGTYGGA-----SILTYNGAIVGTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTN 116
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
T +H D A GN + ++R + L L AVP +++ S V +LN +P WL
Sbjct: 117 TFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWL 176
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY 242
G+++ G ++ VG A+++ + T + + +GF AA ++ ++ + +IGVA+A IY
Sbjct: 177 MGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIY 236
Query: 243 LNLSKK-----GGNGGNAAGSADPIGDILED 268
+ K G NG G + G+ ED
Sbjct: 237 FKQNFKNPVAAGANGAALVGEENEDGE-YED 266
>ref|YP_001178289.1| N-acetylgalactosamine-specific PTS system transporter subunit IIC
[Enterobacter sp. 638]
gb|ABP62238.1| PTS system, mannose/fructose/sorbose family, IIC subunit
[Enterobacter sp. 638]
Length = 267
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
Query: 1 MSDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQML 60
M +I++I I + + FF G++ L+ + +P++ CTL G + G + G+I GG ++
Sbjct: 1 MHEITLIQGISLAALVFFLGIDFWLEALFLFRPIIVCTLTGAILGDIHIGLITGGLTELA 60
Query: 61 ALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRT 120
G G P+ +A V +I +G + I +P ++ ++ + +
Sbjct: 61 FAGLTPAGGVQPPNPIMAGVMTTVIAWSTGVDAKTAI----GLGLPFSLLMQYVILFFYS 116
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+ + D+ A E N AG R ++ L+ AV L + A+Q+++ AMP
Sbjct: 117 AFSLFMSKADRYAKETNTAGFARLNWTTTLIVACTYAVITFLCTYLAQGAMQALVKAMPA 176
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLT-LIAMGVIGVAIA 239
WL G ++ G ++ AVG+ +++ +M + P+ GF Q++ L+ + V+G A
Sbjct: 177 WLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFA 236
Query: 240 FIYLNLSKKGGNGGNAAGSADPIGDILEDY 269
+Y + K N SA + EDY
Sbjct: 237 -VYEFFNAKAKNAAQPQASAAKKDE--EDY 263
>ref|ZP_00827938.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Yersinia frederiksenii ATCC 33641]
Length = 260
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A+ + I+AF AGL+ MH+P+V L+GL+ G L G++ GGTL+++ +
Sbjct: 2 EISLLQALALGILAFIAGLDMFNGLTHMHRPVVLGPLVGLILGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G + A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTAFAITAGVKPE----VAVGVAVPFAVAVQMGITFLFSIM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ DK AA + AGIER +++ALL G + A L + ++V++ +P L
Sbjct: 118 SGVMARCDKMAANADTAGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTVIDVLPARL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F LGF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNIYIPYFILGFVAAAWLKL 221
>ref|ZP_00602508.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
gb|EAN11081.1| Phosphotransferase system PTS, sorbose-specific IIC subunit
[Enterococcus faecium DO]
Length = 248
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 131/246 (53%), Gaps = 21/246 (8%)
Query: 6 IISAILVVIIAFFAGL-EGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
+I AIL+ ++AF A + E M +PL +GL+ G LE+G+I+G TL+ + +G
Sbjct: 1 MIQAILIALVAFLASIDEYTFGASMMGRPLFTAPFVGLILGDLESGIIIGATLESMFMGS 60
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
+G+A P+ +SV I ++SG +G+ A + +PL++ FL M R + A
Sbjct: 61 IMVGSATPPEVYASSVLGTAIAIQSG----QGVGTAVALTLPLSI---FLQMW-RNFAYA 112
Query: 125 LV-----HAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAM- 178
+ + D+A +F +++H++A Q L + VP+A+LV V T S +NAM
Sbjct: 113 MPITYFNNKMDEALVNHDFKKAQKYHYVA---QPLIVGVPSAILVFVATYFGVSTINAMI 169
Query: 179 ---PNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIG 235
P + + + ++ VG A++I MMA + + P+ LGF ++ ++ + V+G
Sbjct: 170 KLIPQVVLDSFDVAAGVLSCVGLALLIKMMANKAMMPYLFLGFVGVMYLKMDVVGVAVVG 229
Query: 236 VAIAFI 241
+ +A +
Sbjct: 230 LCLALL 235
>gb|AAT01094.1| phosphotransferase enzyme II C component [Salmonella typhimurium]
Length = 257
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 131/251 (52%), Gaps = 23/251 (9%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ A+L+ ++AF A E L + +P+V L GLV G +E G+++G TL++ +G
Sbjct: 1 MVEALLLGLVAFIA--EYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF 58
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA- 124
++GA++ PD + + SG G A +P+A L +IV+ +
Sbjct: 59 SVGASLPPDVVTGGILGVAFAINSG----AGAETALLLGLPIAT----LALIVKNIYNGM 110
Query: 125 ----LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSA----VQSVLN 176
L H D A G+ GIER H L+ G+ +++ ++V V A V+ L+
Sbjct: 111 FIPLLCHKADAYAEVGDTRGIERMH----LISGIGLSLMLGIIVTVSYLAGVNMVKGFLD 166
Query: 177 AMPNWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGV 236
A+P ++ G+ + ++ A+G+AM+ ++ ++V P+F LGF L A ++ + + ++G
Sbjct: 167 AIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGA 226
Query: 237 AIAFIYLNLSK 247
+A + +N+ K
Sbjct: 227 IVAVVMVNMPK 237
>ref|ZP_02949885.1| N-acetylgalactosamine permease iic component 1 [Clostridium
butyricum 5521]
gb|EDT75093.1| N-acetylgalactosamine permease iic component 1 [Clostridium
butyricum 5521]
Length = 256
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 126/243 (51%), Gaps = 10/243 (4%)
Query: 13 VIIAFFAGLEGILDQF----QMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIG 68
++I +AG+ G+ D F +H+P+V ++GL+ G ++ G+I+G +L+++ +G +
Sbjct: 6 LLIGIWAGIAGV-DMFDGLTHIHRPIVTGLVVGLILGDMKTGLIVGASLELVWMGMVPLA 64
Query: 69 AAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHA 128
A P+ + + I + Q I A+P AVA ++ T + +H
Sbjct: 65 GAQPPNVVIGGIIGTSIAILGKLDAQAAI----GIAVPFAVAVQAAITLLFTAFSFFMHK 120
Query: 129 GDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEGMQI 188
DK E + AGIER +++ L++ + A L + + +++ A+P W+ +G+ +
Sbjct: 121 ADKYCEEADTAGIERINYLGLVVLFIFYFTIAFLPILLGADKAAAIVGAIPTWIIDGLSV 180
Query: 189 GGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLNLSKK 248
G ++ A+G+AM++ +M +E F LGF L L ++ + ++GV IA +Y SK
Sbjct: 181 AGGVMPAIGFAMLLKIMLKKEYIAFMILGFLLVTYFNLPILGLALLGVCIA-LYDYFSKS 239
Query: 249 GGN 251
N
Sbjct: 240 NSN 242
>ref|NP_786053.1| N-acetylgalactosamine PTS, EIIC [Lactobacillus plantarum WCFS1]
emb|CAD64904.1| N-acetylgalactosamine PTS, EIIC [Lactobacillus plantarum WCFS1]
Length = 269
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 5/247 (2%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+++I +L+ + A AG++ L+ + +P++ CT+ G + G+L G+I GG ++
Sbjct: 2 QVTLIQGLLIGLFALIAGIDFWLEGLYIFRPMIVCTVTGAILGNLTLGIIAGGLTELAFA 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G +G P+ +A + ++ +G K + A A+P ++ ++ + +
Sbjct: 62 GLTPVGGTQPPNPIMAGIMTVVLAYTTG----KTPSTAIGLALPFSILMQYIILFYYSAF 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ L D AA R + +L L V A L V +++++N+MP WL
Sbjct: 118 SVLTKKLDAYAANVETKKFTRLALLPTVLVALTYGVIAFLCVYGAQEPMKALVNSMPVWL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL-TLIAMGVIGVAIAFI 241
+ G +I G ++ AVG+ +++ M E P+ LGF A + L+ + VIG+++AFI
Sbjct: 178 SHGFEIAGNILPAVGFGLLLKSMLKAEYVPYLLLGFTAACFIKFGNLMPVAVIGISLAFI 237
Query: 242 YLNLSKK 248
+KK
Sbjct: 238 EFYHNKK 244
>ref|ZP_01217448.1| putative N-acetylgalactosamine-specific IID component, PTS system
[Psychromonas sp. CNPT3]
gb|EAS37729.1| putative N-acetylgalactosamine-specific IID component, PTS system
[Psychromonas sp. CNPT3]
Length = 256
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 8/226 (3%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+I II A+++ ++AF AGL+ MH+P+V L+GL+ G L+ G+++GGTL+++ +
Sbjct: 2 EIGIIQALMLGLLAFIAGLDLFNGLTHMHRPVVLGPLVGLILGDLQTGILVGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQ--KGITFAYSTAIPLAVAGLFLTMIVRT 120
G A + A P+ + ++ A + +G + GI ++ A+ + + LF M
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGATFAITTGVSAEVAVGIAVPFAVAVQMGITLLFSAM---- 117
Query: 121 LSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN 180
+ ++ D AAEGN GIE ++ AL + G + A L + + + A+P
Sbjct: 118 --SPMMSKCDVMAAEGNTRGIELVNYFALSVLGTFYFLCAFLPIYFGAEHAGAFVEALPK 175
Query: 181 WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
L +G+ + G ++ AVG+A+++ +M P+F LGF AA +L
Sbjct: 176 NLIDGLGVAGGIMPAVGFAILMKIMMKNIYIPYFILGFVAAAWLEL 221
>ref|YP_805221.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Pediococcus pentosaceus ATCC 25745]
gb|ABJ68779.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Pediococcus pentosaceus ATCC 25745]
Length = 305
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 6/225 (2%)
Query: 2 SDISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLA 61
S I+I I++ I + + ++ + Q + QP+ A + GLV G L+ G+I+GG+LQ+
Sbjct: 3 SGIAIWQVIILTIYSMYQIMDELTLQTSLSQPIWAGIIAGLVMGDLKTGLIIGGSLQLTV 62
Query: 62 LGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTL 121
LG G A DA +V A + +G + + + +P+A + ++ R
Sbjct: 63 LGVGTFGGASKIDANSGTVMATAFAIGTGMKPEVAVA---ALGVPVASLMIQTDIVARFA 119
Query: 122 STALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPN- 180
+T H DK E N++GIER + L L +P L +A V++ ++ M
Sbjct: 120 NTFFQHRIDKLIDEENYSGIERNYLYGYLPWTLSRGIPVFLALAFGGPFVRTAVDYMNTN 179
Query: 181 --WLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAI 223
WL+ G+ GA++ AVG+A+++ + ++ WP+ LGF + A+
Sbjct: 180 LAWLSNGLATAGALLPAVGFAILLRYLPVKKHWPYLILGFVITAM 224
>ref|YP_805700.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Lactobacillus casei ATCC 334]
gb|ABJ69258.1| Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Lactobacillus casei ATCC 334]
Length = 269
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
I+ IL++ +A +A L+ + P+ GL+ G L + + GT Q+++LG A
Sbjct: 4 ILQDILIIFLASYATLDNQGITIMNYWPVTVGLFAGLIMGDLPTAMTIAGTFQLMSLGVA 63
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
+G A PD LA++ + ++G G+ A + +P+ + + L ++++ ++ +
Sbjct: 64 GLGGASVPDYGLATIVGIYLSARTG----AGLGAAVAVGLPVGLLTIQLDVLIKIVNNFI 119
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
H A F + +++ L L+ +P L+V V SA+ ++L +P WL G
Sbjct: 120 AHKAQAYAHAKEFNKMRMINWLGPLFFALKNFIPMILIVTVGPSAISALLKIIPKWLTNG 179
Query: 186 MQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA-FIYLN 244
+ I G+M+ VG M+++ M ++ +GF ++A ++ ++ + +IG+A+A + Y N
Sbjct: 180 LTIAGSMLPVVGIGMLMHYMPLKKYIWVLMIGFVMSAYLKVPILGVAIIGLALAIYTYQN 239
Query: 245 L---SKK 248
L SKK
Sbjct: 240 LISASKK 246
>ref|NP_815501.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO81571.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 299
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 11/242 (4%)
Query: 12 VVIIAFFAGLEGILDQFQMHQ----PLVACTLIGLVTGHLEAGVILGGTLQMLALGWANI 67
++++ +AG + ILD+ Q++ P+ A GLV G ++AG+I+GG++Q+ LG
Sbjct: 8 ILLLTLYAGYQ-ILDELQIYSSLSAPVFAGLFAGLVMGDIKAGLIIGGSMQLTVLGVGTF 66
Query: 68 GAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVH 127
G A DA ++ A V G ++ I L + L ++ R +T H
Sbjct: 67 GGASKIDANSGTILATAFSVSLGMNPEQAIAAIAVPVASLMIQ---LDILARFANTYFAH 123
Query: 128 AGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQ---SVLNAMPNWLNE 184
DK + N+ GIER + L L +P L +A VQ SVLN WL +
Sbjct: 124 RIDKMVEDMNYKGIERNFLMGALPWSLSRMIPVFLALAFGGGLVQKVVSVLNGDLKWLGD 183
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYLN 244
G+ + GA++ AVG+A+++ + ++ +P+ LGF + A+ M ++G ++A + +
Sbjct: 184 GLSVAGAVLPAVGFAILLRYLPVKKHFPYLILGFTVTALLGTIFTNMQLLGTSVASVVKD 243
Query: 245 LS 246
S
Sbjct: 244 FS 245
>ref|ZP_02042024.1| hypothetical protein RUMGNA_02800 [Ruminococcus gnavus ATCC 29149]
gb|EDN76904.1| hypothetical protein RUMGNA_02800 [Ruminococcus gnavus ATCC 29149]
Length = 257
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 8/240 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ AIL+ +I F + + +PLV L+G+V G + GV++G L+++ +G
Sbjct: 1 MLQAILIGLIVFIGKADYFIGTAMFGRPLVLGALVGIVLGDIPTGVMIGFQLELIFMGMQ 60
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFL-TMIVRTLSTA 124
IGA++ PD + SV + +G KG+ A + A+P A+ F+ + ++
Sbjct: 61 AIGASIPPDMIVGSVLGTAFAITTG----KGMETAITIAMPAAILSAFVVNLFYGVITPI 116
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
+ A D+ A EG + IE L L AV A +V +V+NA+P WL
Sbjct: 117 MAKAADRFAEEGKYKKIEGVFLSNGFLFDLTFAVIAFGAFLFGGDSVTAVVNAIPGWLTT 176
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAA---ISQLTLIAMGVIGVAIAFI 241
G+ I ++ A+G+A +INM+ ++V FF LGF L+A IS + ++ V+ V I I
Sbjct: 177 GIGIAAGILPALGFAQLINMIMNKKVAVFFLLGFLLSAYMGISTVGIVCFSVVIVGILLI 236
>ref|NP_312039.1| N-acetylgalactosamine-specific PTS system enzyme IIC component
[Escherichia coli O157:H7 str. Sakai]
ref|ZP_00711196.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B171]
ref|ZP_00714298.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli B7A]
ref|ZP_00724737.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli F11]
ref|ZP_00731340.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli E22]
ref|ZP_00735768.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli 53638]
ref|ZP_00924414.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli 101-1]
ref|YP_542540.1| putative phosphotransferase system enzyme subunit [Escherichia coli
UTI89]
ref|YP_671107.1| putative phosphotransferase system enzyme subunit (AgaW)
[Escherichia coli 536]
ref|YP_858755.1| putative phosphotransferase system enzyme subunit [Escherichia coli
APEC O1]
ref|YP_001464607.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli E24377A]
ref|YP_001459935.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli HS]
ref|ZP_02740984.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4045]
ref|ZP_02750419.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4206]
ref|ZP_02766944.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4115]
ref|ZP_02774294.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4113]
ref|ZP_02779119.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4401]
ref|ZP_02787102.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4501]
ref|ZP_02794556.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4486]
ref|ZP_02798208.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli O157:H7 str. EC4196]
ref|ZP_02806282.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4076]
ref|ZP_02811021.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC869]
ref|ZP_02816553.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC4042]
ref|ZP_02822739.1| putative phosphotransferase system enzyme subunit [Escherichia coli
O157:H7 str. EC508]
ref|YP_001723570.1| phosphotransferase system PTS sorbose-specific IIC subunit
[Escherichia coli ATCC 8739]
ref|YP_001745409.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli SMS-3-5]
dbj|BAB37435.1| N-acetylgalactosamine-specific PTS system enzyme IIC component
[Escherichia coli O157:H7 str. Sakai]
gb|ABE09009.1| putative phosphotransferase system enzyme subunit [Escherichia coli
UTI89]
gb|ABG71206.1| putative phosphotransferase system enzyme subunit (AgaW)
[Escherichia coli 536]
gb|ABJ02631.1| putative phosphotransferase system enzyme subunit [Escherichia coli
APEC O1]
gb|ABV07552.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli HS]
gb|ABV17118.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli E24377A]
gb|ACA76243.1| phosphotransferase system PTS sorbose-specific IIC subunit
[Escherichia coli ATCC 8739]
gb|ACB20139.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli SMS-3-5]
gb|EDU34823.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia coli O157:H7 str. EC4196]
Length = 259
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + IIAF AGL+ MH+P+V L+GLV G L G++ GGTL+++ +
Sbjct: 2 EISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G + + A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTAFAITTG--VKPDV--AVGVAVPFAVAVQMGITFLFSVM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ D+ A + GIER +++ALL G + A L + +++++ +P L
Sbjct: 118 SGVMSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F LGF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKL 221
>ref|YP_001089793.1| PTS system, IIc component [Clostridium difficile 630]
ref|ZP_02740318.1| PTS system, IIc component [Clostridium difficile QCD-63q42]
emb|CAJ70174.1| PTS system, IIc component [Clostridium difficile 630]
Length = 263
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 8/250 (3%)
Query: 6 IISAILVVIIAFFAGLEG-ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
++ A ++ IIA L+G I Q + +P+V L+GLV G +++G+++G L+++ +G
Sbjct: 2 LVQATMLAIIAGVGILDGRIFGQSMLDRPIVTGMLVGLVLGDIKSGIMIGAQLELIWMGI 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
A IGAA PD V + SG+ G A + A+P+AV L ++VR +++
Sbjct: 62 AGIGAATPPDVVTGGVLGTAFAILSGN----GAEVALAVAVPVAVLAQSLGVLVRIINSY 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
A + +F + ++ ++L L +VP L + + V +++NA+P + +
Sbjct: 118 FSQKAVFYAKQADFKKVTIMMWLPVILFFLSTSVPTFLAIMIGADKVTALINAIPKVILD 177
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI--- 241
G+ + G ++ AVG+A++++M+ ++++ FF +GF LA+ L + A+ + GV +AF+
Sbjct: 178 GLGVAGTLLPAVGFALLMDMLLSKKMSVFFFIGFLLASYGGLDITAIALFGVCVAFVLNF 237
Query: 242 YLNLSKKGGN 251
Y+N + N
Sbjct: 238 YINNKENNQN 247
>ref|ZP_01802803.1| hypothetical protein CdifQ_04003808 [Clostridium difficile
QCD-32g58]
ref|ZP_02729883.1| PTS system, IIc component [Clostridium difficile QCD-37x79]
ref|ZP_02756513.1| PTS system, IIc component [Clostridium difficile QCD-76w55]
ref|ZP_02763853.1| PTS system, IIc component [Clostridium difficile QCD-97b34]
Length = 263
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 138/250 (55%), Gaps = 8/250 (3%)
Query: 6 IISAILVVIIAFFAGLEG-ILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGW 64
++ A ++ IIA L+G I Q +P+V L+GLV G +++G+++G L+++ +G
Sbjct: 2 LVQATMLAIIAGVGILDGRIFGQSMFDRPIVTGMLVGLVLGDIKSGIMIGAQLELIWMGI 61
Query: 65 ANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTA 124
A IGAA PD V + SG+ G A + A+P+AV L ++VR +++
Sbjct: 62 AGIGAATPPDVVTGGVLGTAFAILSGN----GAEVALAVAVPVAVLAQSLGVLVRIINSY 117
Query: 125 LVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNE 184
A + +F + ++ ++L L +VP L + + V +++NA+P + +
Sbjct: 118 FSQKAVFYAKQADFKKVTIMMWLPVILFFLSTSVPTFLAIMIGADKVTTLINAIPKVILD 177
Query: 185 GMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIAFI--- 241
G+ + G ++ AVG+A++++M+ ++++ FF +GF LA+ L + A+ + GV +AF+
Sbjct: 178 GLGVAGTLLPAVGFALLMDMLISKKMSVFFFIGFLLASYGGLDITAIALFGVCVAFVLNF 237
Query: 242 YLNLSKKGGN 251
Y+N + N
Sbjct: 238 YINNKENNQN 247
>ref|YP_542932.1| putative phosphotransferase system protein [Escherichia coli UTI89]
ref|YP_859058.1| hypothetical protein APECO1_2996 [Escherichia coli APEC O1]
gb|AAO43653.1| putative phosphotransferase system protein [Escherichia coli]
emb|CAH17965.1| hypothetical protein [Escherichia coli]
gb|ABE09401.1| putative phosphotransferase system protein [Escherichia coli UTI89]
gb|ABJ02934.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 248
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 30 MHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKS 89
M PL ++GL+ + + +G TLQM+ +G G D LAS A I + +
Sbjct: 27 MRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIGSIAPGGNPPADEGLASCIAIPIALTA 86
Query: 90 GDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIAL 149
G + A S AIPL + G+ L + +TL+T +H D+ A +G+ GI+R I
Sbjct: 87 GIKPE----IAISLAIPLGLLGVVLENVRKTLNTTFIHMADRYAEKGDIKGIQRAATIYP 142
Query: 150 LLQGLRIA-VPAALLVAVPTSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATR 208
LL + VP + A+ S +N +P W G+ I G ++ A+G+A+ I ++ +
Sbjct: 143 LLLAFPMRFVPVFIACLYGPDAIASFVNLLPAWSTNGLAIAGNILPALGFAITIIVIGKK 202
Query: 209 EVWPFFALGFALAAISQLTLIAMGVIGVAIAFIYL-NLSKKGGNGG 253
+ P F +GF L S L I + + G+ +Y+ + + KG G
Sbjct: 203 QYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQNTKGTKNG 248
>gb|EDN73080.1| PTS family mannose porter component IIC [Mannheimia haemolytica
PHL213]
Length = 255
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 132/245 (53%), Gaps = 8/245 (3%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
+++A+LV A L+ I Q + +PL+ ++GL+ G LE +I+G TL+++ +G
Sbjct: 1 MLTALLVACWAGICALDDIGTQM-IRRPLLIAPVVGLIMGDLETALIIGATLEVMWMGIG 59
Query: 66 NIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTAL 125
N+GA APD + + + +G+ + A + A+P ++ L ++ R+ AL
Sbjct: 60 NVGAYSAPDMISGTAIGTALGIAAGEAST-----AVALAVPTSLLAQQLLILYRSGVCAL 114
Query: 126 VHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWLNEG 185
++ AA G+F I R H+I +L+ A+P L V + ++A+P + G
Sbjct: 115 NPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADIIAQAVSALPAKVITG 174
Query: 186 MQIGGAMVVAVGYAMVINMMATR-EVWPFFALGFALAAISQLTLIAMGVIGVAIAFIY-L 243
+ + G ++ A+G +++ MM + E+W F GF LA +L+++ + +I + +A IY L
Sbjct: 175 LNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSVLPITLIALPLALIYDL 234
Query: 244 NLSKK 248
+SKK
Sbjct: 235 AVSKK 239
>ref|YP_920502.1| PTS system mannose/fructose/sorbose family IID component
[Thermofilum pendens Hrk 5]
gb|ABL78499.1| PTS system mannose/fructose/sorbose family IID component
[Thermofilum pendens Hrk 5]
Length = 534
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 142/276 (51%), Gaps = 21/276 (7%)
Query: 1 MSDISIISAILVVIIAFFAGLEGI-LDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQM 59
M+ I + L+ ++AF GL+ I + + +P+VA TL G++ G G+++G L+
Sbjct: 1 MATIGPLEVGLLGLLAFIFGLDYIWVTPLGIWRPVVAGTLTGIILGDPLTGLLVGSLLEF 60
Query: 60 LALGWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVR 119
+ G IG P+AA ++A+ ++ V +G + + A IP+AV + L ++VR
Sbjct: 61 VFAGLFTIGGGTVPEAASGTIASVVVAVTTGLKPEAAVPLA----IPVAVLTMNLEIVVR 116
Query: 120 TLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALL---VAVPTSAVQSVLN 176
+ H D+ GN+ I + + + GL A+P L +A+ AV++ ++
Sbjct: 117 SFDAVFTHWADREIERGNYGAIPLINILGAVPWGLSRAIPIWLFAGALAINPQAVKAAID 176
Query: 177 AMP----------NWLNEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
A+ W + M + GA++ A+G A+++ +M +R FF LGFALAA +L
Sbjct: 177 ALQVVQIGPFTVRFW--DAMAVAGAVLPALGAAILMKLMISRRNVMFFVLGFALAAYLKL 234
Query: 227 TLIAMGVIGVAIAF-IYLNLSKKGGNGGNAAGSADP 261
+L+A+ ++ +I F IY ++ G A +A P
Sbjct: 235 SLLAIALVAGSIIFAIYYFTHREALEAGAAVTTAAP 270
>ref|ZP_02900888.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia albertii TW07627]
gb|EDS94154.1| PTS system, N-acetylgalactosamine-specific, IIC component
[Escherichia albertii TW07627]
Length = 259
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 121/224 (54%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + I+AF AGL+ MH+P+V L+GL+ G L G++ GGTL+++ +
Sbjct: 2 EISLLQAFALGILAFIAGLDMFNGLTHMHRPVVLGPLVGLILGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G + + A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTAFAITTG--VKPDV--AVGVAVPFAVAVQMGITFLFSVM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ D+ A + GIER +++ALL G+ + A L + +++++ +P L
Sbjct: 118 SGVMSRCDRMAENADTRGIERVNYLALLALGIFYFLCAFLPIYFGAEHAKTIIDVLPQRL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F LGF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKL 221
>ref|NP_816655.1| PTS system, IIC component [Enterococcus faecalis V583]
gb|AAO82725.1| PTS system, IIC component [Enterococcus faecalis V583]
Length = 257
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 6 IISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWA 65
++ AILV I A AG++ ++ Q +H+P+V ++GL+ G + G+I G TL+++ +G
Sbjct: 2 LVQAILVGIWAGIAGVDKLVLQTHIHRPIVTGLIVGLILGDVNTGLITGATLELVWIGAV 61
Query: 66 NIGAAVAPDAALASV--AAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLST 123
IG A P+ + V A I+ KS G+ A+P AVA L ++ T +
Sbjct: 62 AIGGAQPPNVVIGGVIGTALAIITKSDPQVTVGL------AVPFAVAAQALITLLYTAMS 115
Query: 124 ALVHAGDKAAAEGNFAGIERF-HFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
++H D A + + GIER F+ ++L V L + S ++ +P W
Sbjct: 116 PIMHKFDVYAKKADTRGIERMSSFLPIVLFICYFFV-VFLCIFFGADKASSFISILPEWS 174
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQLTLIAMGVIGVAIA 239
G+ + G M+ AVG+AM++ M PFF GF +AA L +A+ + VAIA
Sbjct: 175 IHGLSVAGGMMPAVGFAMLLKTMWETSYVPFFIFGFVMAAYLGLDTLAVAGLAVAIA 231
>ref|NP_755756.1| Putative phosphotransferase system enzyme subunit [Escherichia coli
CFT073]
gb|AAN82330.1|AE016767_90 Putative phosphotransferase system enzyme subunit [Escherichia coli
CFT073]
Length = 259
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + II F AGL+ MH+P+V L+GLV G L G++ GGTL+++ +
Sbjct: 2 EISLLQAFALGIIGFIAGLDMFNGXTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTAFAITTGVKPD----VAVGVAVPFAVAVQMGITFLFSVM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ D+ A + GIER +++ALL G + A L + +++++ +P L
Sbjct: 118 SGVMSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F LGF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKL 221
>ref|YP_456105.1| putative PTS system IIC component [Sodalis glossinidius str.
'morsitans']
dbj|BAE75700.1| putative PTS system IIC component [Sodalis glossinidius str.
'morsitans']
Length = 247
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 30 MHQPLVACTLIGLVTGHLEAGVILGGTLQMLALGWANIGAAVAPDAALASVAAAIIMVKS 89
+ QPL A LIGL+ G + VI+ +Q+L +G G+ + D LA + A + + +
Sbjct: 29 IRQPLFASVLIGLIMGDVTQAVIISAAIQILYIGLVAAGSNLPADDCLAGLIAIPLALNT 88
Query: 90 GDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIAL 149
G T A + A+P+ V G+FL + +T++ VH DK A EGN I+ I
Sbjct: 89 G----LSPTLAIAIAVPVGVMGVFLGQLRKTVNAVFVHMADKYAEEGNVRQIKLCTIIWP 144
Query: 150 LLQGLRIAVPAALLVAVP-TSAVQSVLNAMPNWLNEGMQIGGAMVVAVGYAMVINMMATR 208
L G I P L + ++ + LN++P WL G + G ++ A+G+A+ I ++ +
Sbjct: 145 TLLGFFIRFPVPFLANLYGKDSINAFLNSVPKWLIHGFSVVGGLLPALGFALTIFVIGKK 204
Query: 209 EVWPFFALGFALAAISQLTLIAMGVIGVA 237
+ P+F +G+ L S + + + G++
Sbjct: 205 ALLPWFFIGYFLVQFSGIPVFGAAIFGLS 233
>ref|YP_001456022.1| hypothetical protein CKO_04532 [Citrobacter koseri ATCC BAA-895]
gb|ABV15586.1| hypothetical protein CKO_04532 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 121/224 (54%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + I+AF AGL+ MH+P+V L+GL+ G L G++ GGTL+++ +
Sbjct: 2 EISLLQAFALGILAFIAGLDMFNGLTHMHRPVVLGPLVGLILGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G + + A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTTFAITTG--VKPDV--AVGVAVPFAVAVQMGITFLFSVM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ D+ AA + GIER +++ALL G+ + A L + ++ ++ +P L
Sbjct: 118 SGVMSRCDRMAANADTHGIERVNYLALLALGIFYFLCAFLPIYFGAEHAKTAIDVLPERL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F +GF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFIIGFVAAAWLKL 221
>ref|ZP_00723252.1| COG3715: Phosphotransferase system,
mannose/fructose/N-acetylgalactosamine-specific
component IIC [Escherichia coli E110019]
Length = 259
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Query: 3 DISIISAILVVIIAFFAGLEGILDQFQMHQPLVACTLIGLVTGHLEAGVILGGTLQMLAL 62
+IS++ A + IIAF AGL+ MH+P+V L+G V G L G++ GGTL+++ +
Sbjct: 2 EISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGFVLGDLHTGILTGGTLELVWM 61
Query: 63 GWANIGAAVAPDAALASVAAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLS 122
G A + A P+ + ++ + +G + + A A+P AVA + ++
Sbjct: 62 GLAPLAGAQPPNVIIGTIVGTAFAITTG--VKPDV--AVGVAVPFAVAVQMGITFLFSVM 117
Query: 123 TALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTSAVQSVLNAMPNWL 182
+ ++ D+ A + GIER +++ALL G + A L + +++++ +P L
Sbjct: 118 SGVMSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRL 177
Query: 183 NEGMQIGGAMVVAVGYAMVINMMATREVWPFFALGFALAAISQL 226
+G+ + G ++ A+G+A+++ +M P+F LGF AA +L
Sbjct: 178 IDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKL 221
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.325 0.139 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 1,033,544,515
Number of extensions: 39218384
Number of successful extensions: 198436
Number of sequences better than 10.0: 760
Number of HSP's gapped: 201095
Number of HSP's successfully gapped: 771
Length of query: 269
Length of database: 2,222,278,849
Length adjustment: 131
Effective length of query: 138
Effective length of database: 1,368,800,225
Effective search space: 188894431050
Effective search space used: 188894431050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)