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BUILD 129
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Submitted SNP(ss) Details: ss947737           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-383926
RefSNP(rs#)rs308791
Submitted Batch IDOVLP-000804-1
Submitted DateSep 01, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 1 2000 12:00:00:000AM
Resource Links
GenBank AccessionAC027127.3
AC040976.3
Submitted Gene NameN.D
Submitted Gene IDN.D.
Submitted SNP SynonymsN.D
Submitted linkoutN.D
Submission reportview
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
SNP Classsingle base
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC027127 SequenceAccession1:AC027127 SequenceVersion1:3 SequenceContigName1:Contig32 SequenceContigPosition1:7280 SequenceLocalName2:AC040976 SequenceAccession2:AC040976 SequenceVersion2:3 SequenceContigName2:Contig18 SequenceContigPosition2:17419 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss947737|allelePos=220|len=567|taxid=9606|alleles='C/T'|mol=Genomic
 GATGATAATT TCCCAAATGT CTTTCTCAAT ACTGACATTT CATTGATTCC TACAAATTCT
 TTACCAGTCT TTCAAATACA ATCTTAGTGT TTATAATTTC tggtagctaa gctaatggac
 tctagagaca aactgcttag atttgaattt aaagtccaat cctttccagc tgtttgtcct
 tgggcaattt atttaacctc acaggtctca acttcctta
 Y
 ttataaaatg gggatactaa tgttacctgt ctcatggggt tgttttaatg gttcagtgaa
 tatctatgtg gtattgacag tagtacctgc tacTGTCAGT CTCAATTTCA CATGTCTCAA
 TTTCCTTATT TATAAAATGG GAATAGTAAT GTTACCTGTC TCATGGGGTT GTTTTAGTGG
 TTCAGTGAAT GTCTATGTGG TACTGACAGT AGTACCTGCT ACATCATAAA TGCTCATTGA
 AGTTAGTTAT CATTAGCCCC TATCATCCCC TTTCCACATC CTACACTCCA CTTTCCCTTC
 TGTGGGTTCT GCCTATTTAG ACTTCAGCTG GAGTGTCCAA GAACTTG

  Submitted Frequency for ss947737 back to top
There is no frequency submission for ss947737.

  dbSNP summary of Genotypes for ss947737 back to top
No sufficient data to compute Hardy-weinberg probability for ss947737.

  Submitted individual genotype for ss947737 back to top
There is no individual genotype data for ss947737.

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Revised: May 25, 2006 1:38 PM .