Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss224876	KWOK|OVLP-000621-16513		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	06/30/00	10/10/03	79	Genomic			96 %
ss230551	KWOK|OVLP-000621-348889		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	06/30/00	10/10/03	79	Genomic			95 %
ss628802	SC_JCM|AC027131.2_142745		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	07/12/00	10/10/03	80	Genomic			unknown
ss956249	KWOK|OVLP-000804-432860		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	09/01/00	10/10/03	86	Genomic			99 %
ss1033690	KWOK|OVLP-000804-441043		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	09/02/00	10/10/03	86	Genomic			97 %
ss1068475	KWOK|OVLP-000804-424453		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	09/02/00	10/10/03	86	Genomic			81 %
ss1714814	KWOK|OVLP-000925-694571		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	10/05/00	04/07/04	92	Genomic			99 %
ss1744754	KWOK|OVLP-000925-690480		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	10/05/00	10/10/03	92	Genomic			97 %
ss1756850	KWOK|OVLP-000925-685126		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	10/05/00	10/10/03	92	Genomic			81 %
ss14263443	BCM_SSAHASNP|chr16.NT_010498.14_15634259		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	11/05/03	11/22/03	119	Genomic			unknown
ss17562723	CSHL-HAPMAP|CSHL-HuCC-200402.chr16.NT_010498.14_15634259		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	02/19/04	03/04/04	120	Genomic			unknown
ss43948788	ABI|hCV2287344		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	07/18/05	07/18/05	126	Genomic			unknown
ss65715874	ILLUMINA|Human1-rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	10/10/06	10/10/06	127	Genomic			unknown
ss67117098	ILLUMINA|HumanHap550v1.1_rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	11/14/06	11/14/06	127	Genomic			unknown
ss67454754	ILLUMINA|HumanHap650Yv1.0_rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	11/14/06	11/14/06	127	Genomic			unknown
ss68156793	ILLUMINA|HumanHap250Sv1.0_rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	12/06/06	12/07/06	127	Genomic			unknown
ss70624434	ILLUMINA|HumanHap550v3.0__rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	04/20/07	03/30/08	130	Genomic			unknown
ss71173558	ILLUMINA|HumanHap650Yv3.0_rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	04/23/07	04/23/07	127	Genomic			unknown
ss74830409	AFFY|SNP_M-587186		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	08/09/07	08/09/07	128	Genomic			unknown
ss75881341	ILLUMINA|ILMN_Human_1M_rs149156		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	08/28/07	08/29/07	129	Genomic			unknown
ss78203722	HGSV|Cor12878_SNV_20070510.chr16_65470207		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	10/17/07	10/18/07	129	Genomic			unknown
ss82299030	HGSV|Cor18555_SNV_20070510.chr16_65470207		rev/B	C/T	aaaataatttataaggaagcaggtcatcac	ggaatgccacaatgttaggaccagaaggga	11/27/07	12/02/07	130	Genomic			unknown
ss83367665	KRIBB_YJKIM|KHS444895		fwd/T	A/G	tcccttctggtcctaacattgtggcattcc	gtgatgacctgcttccttataaattatttt	12/04/07	12/04/07	130	Genomic			unknown

Fasta sequence   (Legend)

 TTGATTTTAC GGTTTTCCCT CCTCCACCTT TGACTTGGTC CTAACCACAG AGCAGAGCAG
 CCAGAATGAC GCCCCTCCCA CCTTTTCTCG TGGTTGGTGG gtagagacaa ggtctttcta
 tgttgcccag gctggtctca aactgccagg ctcaagcaat cctcccacct cagcctcccc
 aaagtgctgg gattacagac gtgagccatc acgcctggcA GAATGACACT TCTAAAACTC
 AAATTCCAAg gccgagtgcg gtggctcctg cctgtaatcc cagcactttg ggaggccgag
 gcggggggat ctcctgaggt caggagtttg agaccagcct ggccaacatc acgaaaccgt
 ctctactaaa aatacaaaaa ttagctggga gtggtggtgc gcgcctgtag tcccagctac
 ctgggaggct gaggcatgag aatcatttga accagggagg tggaagttgc actgaggtga
 gatcatgcca ctgcacgcca gcctgggaga cagagtgaga gtctgtctca aaaaaaacaa
 aaacagaaac aaaaacaaaC CAAAAAAACC CTCAAATTCC TGCCCTAAAG TCtttttttt
 tttttttttt ttttttttga gacggagtct cgctctgtcg cccaggctgg agtgcagtgg
 cgggatctcg gctcactgca agctccgcct cccgggttca cgccattccc ctgcctcagc
 ctcccaagta gctgggacta caggcgcccg ccactacgcc cggctaattt tttgtatttt
 tagtagagac ggggtttcac cgttttagcc gggatggtct cgatctcctg acctcgtgat
 ccgcccgcct ccgcctccca aagtgctggg attacaggca tgagccaccg cgcccggccT
 CCTGCCCTAA AGTCTTTAGT GGTTTCCCAC AAACCATTAA GCTTTGAACT GACCATTATA
 TTGGCCTGCT ACTGACAATT AACTCAGCAC GGCTGGCGGC TGGTAGGTTG AGAGAGACAG
 CGAACCCCGA CACCAGATAA TCCCTCCGTC CCTTCTGGTC CTAACATTGT GGCATTCC
 R
 GTGATGACCT GCTTCCTTAT AAATTATTTT CACAGAACTC TTGTAACTAT GGTAAGTCAG
 ATGGAGTCCT TCCCTGGAGA CAGAGAAAAA TGGGAGACAA CCAGAAAAAG CCACTTGGAG
 CCCTGAGAGT GTGGTTTTCC AGAAGGAAGA CACACTGGCT TACCTGGGCA GCCTGGCCAG
 CCTCCTGGAC CCAAGGACGT

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_010498->NM_020786 sv function
Celera	NW_926462->NM_020786 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss1714814	CEPH		184	AF					0.390	0.610
	HapMap-CEU	European	120	IG	0.233	0.417	0.350	0.251	0.442	0.558
	HapMap-HCB	Asian	90	IG	0.111	0.444	0.444	1.000	0.333	0.667
	HapMap-JPT	Asian	88	IG	0.159	0.523	0.318	0.655	0.420	0.580
	HapMap-YRI	Sub-Saharan African	120	IG	0.017	0.133	0.850	0.343	0.083	0.917

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
Validated by: ILLUMINA	UNKNOWN	UNKNOWN	UNKNOWN