BLASTX+BEAUTY Search Results

WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.

BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.

BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract

Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract 





Checking for E. coli insertion elements
Checking for E. coli insertion elements

Masked Sequence:
>'E14G03_N03_14.ab1'
CGGCCGGGGCATCAAGNAAAGAAGCGTTTGAGGGAGAAGAGAAGTTTTGT
GCAAAATCCTTGGGAACAGTAATTGGTTTTGCCATTTCAAAGCTGGGAAA
GAACATTCGAGTACTTTCAAGTTCCTTTGTCAATAAGCAAGAGCAATACA
CTGTGGAAGGAGTGCAGAATCTTGGAGACAAAGCAGTGATGTGTCATGGG
CTAAATTTCAGAACTGCAGTATTTTACTGCCATAAAGTCCGTGAAACAAC
AGCTTTCATGGTTCCATTGGTGGCTGGTGATGGAACCAAAACTCAGGCAC
TTGCTGTTTGCCACTCAGATACTTCTGGAATGAATCATCACATGCTTCAT
GAACTCATGGGAGTTGATCCTGGAACTAACCCTGTTTGCCATTTCCTTGG
AAGCAAGGCCATTTTATGGGTACCCAATATATCTATGGACACTGCCTATC
AGACTAACGTTGTTGTTTAATTAGTCCATGCATCTGCATCTTGGGCACCA
TAAGATTGTATATAAAATAAATTATGGTGTGTTGTGTATGTTGTGCAAGA
CCTGGAACTTCACCTTTCTACGTACGTGTGCTGTTAGGATGCAGTGTGCT
TTGATGATGCTTTGATGAATAT




Reference:  Gish, Warren (1994-1997).  unpublished.
Gish, Warren and David J. States (1993).  Identification of protein coding
regions by database similarity search.  Nat. Genet. 3:266-72.


Notice:  statistical significance is estimated under the assumption that the
equivalent of one entire reading frame in the query sequence codes for protein
and that significant alignments will involve only coding reading frames.


Query=  'E14G03_N03_14.ab1'
        (622 letters)

  Translating both strands of query sequence in all 6 reading frames


Database:  nr
           625,274 sequences; 197,782,623 total letters.


     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)

        Histogram units:      = 3 Sequences     : less than 3 sequences

 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 815 174 |==========================================================
   6310 641 129 |===========================================
   3980 512 179 |===========================================================
   2510 333 100 |=================================
   1580 233  82 |===========================
   1000 151  50 |================
    631 101  27 |=========
    398  74  24 |========
    251  50  12 |====
    158  38   4 |=
    100  34   4 |=
   63.1  30   2 |:
   39.8  28   0 |
   25.1  28   0 |
   15.8  28   1 |:
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 27  <<<<<<<<<<<<<<<<<
   10.0  27   2 |:
   6.31  25   0 |
   3.98  25   0 |
   2.51  25   0 |
   1.58  25   0 |
   1.00  25   1 |:
   0.63  24   0 |
   0.40  24   0 |
   0.25  24   0 |
   0.16  24   0 |
   0.10  24   1 |:


                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N
gi|7488713|pir||T08896Sali3-2 protein, aluminium-indu... +3   780  1.7e-76   1
gi|485515|pir||S33622ADR6 protein - soybean >gi|29644... +3   739  3.7e-72   1
gi|119097|sp|P21747|EA92_VICFAEMBRYONIC ABUNDANT PROT... +3   402  1.9e-36   1
gi|100102|pir||S14068seed protein precursor - tick be... +3   399  3.9e-36   1
gi|119095|sp|P21745|EA30_VICFAEMBRYONIC ABUNDANT PROT... +3   399  3.9e-36   1
gi|135067|sp|P09059|SVF3_VICFAUNKNOWN SEED PROTEIN 30... +3   389  4.5e-35   1
gi|119096|sp|P21746|EA87_VICFAEMBRYONIC ABUNDANT PROT... +3   389  4.5e-35   1
gi|2129886|pir||S70755hypothetical protein - garden p... +3   360  5.3e-32   1
gi|7488827|pir||T06815probable embryonic abundant pro... +3   320  9.2e-28   1
gi|1172874|sp|Q08298|RD22_ARATHDEHYDRATION-RESPONSIVE... +3   297  2.5e-25   1
gi|7106540|dbj|BAA92225.1|(AB038692) similar to the B... +3   291  1.1e-24   1
gi|5257263|dbj|BAA81762.1|(AP000364) EST AU029260(E30... +3   201  1.6e-14   1
gi|5430766|gb|AAD43166.1|AC007504_21(AC007504) Putati... +3   186  1.5e-13   1
gi|7488443|pir||T07844BURP domain-containing protein ... +3   180  7.2e-13   1
gi|7489022|pir||T07178hypothetical protein SEND35, se... +3   174  2.7e-12   1
gi|7489056|pir||T07587probable polygalacturonase (EC ... +3   151  9.6e-09   1
gi|7488154|pir||T02289probable polygalacturonase (EC ... +3   150  1.2e-08   1
gi|7489055|pir||T07426probable polygalacturonase (EC ... +3   150  1.2e-08   1
gi|1762584|gb|AAB39546.1|(U63373) polygalacturonase i... +3   148  7.9e-08   1
gi|7488153|pir||T01485probable polygalacturonase (EC ... +3   148  7.9e-08   1
gi|1762428|gb|AAB39538.1|(U59467) aromatic rich glyco... +3   141  1.4e-06   1
gi|4056458|gb|AAC98031.1|(AC005990) Identical to gb|A... +3   141  1.4e-06   1
gi|320585|pir||JQ1670polygalacturonase (EC 3.2.1.15) ... +3   141  1.5e-06   1
gi|4091010|gb|AAC99621.1|(AF042275) anther-specific p... +3    99  0.063     1
gi|7716012|gb|AAF68251.1|AF206524_2(AF206524) serorea... -3    70  0.61      1
gi|6324405ref|NP_014475.1| Ynr077cp [Saccharomyces ce... -3    61  0.99992   1
gi|2769725|gb|AAC40337.1|(U92288) H88 [Human herpesvi... +2    61  0.99992   1



Use the  and  icons to retrieve links to Entrez:

E = Retrieve Entrez links (e.g., Medline abstracts, FASTA-formatted sequence reports).

R = Retrieve links to Related sequences (neighbors).

Use the  icon (if present) to retrieve links to the Sequence Retrieval System (SRS).

Use the  icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .

Use the  icon (if present) to retrieve links to the Protein Data Bank database.



to_Entrezto_Relatedto_Related >gi|7488713|pir||T08896  Sali3-2 protein, aluminium-induced - soybean
            >gi|2317900|gb|AAB66369.1| (U89693) Sali3-2 [Glycine max]
            Length = 276

Frame  3 hits (HSPs):                         ____________________________
                        __________________________________________________
Database sequence:     |        |        |        |         |        |    | 276
                       0       50      100      150       200      250

  Plus Strand HSPs:

 Score = 780 (274.6 bits), Expect = 1.7e-76, P = 1.7e-76
 Identities = 147/150 (98%), Positives = 150/150 (100%), Frame = +3

Query:    18 KEAFEGEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFVNKQEQYTVEGVQNLGDKAVMCH 197
             KEAFEGEEKFCAKSLGTVIGFAISKLGKNI+VLSSSFVNKQEQYTVEGVQNLGDKAVMCH
Sbjct:   127 KEAFEGEEKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQEQYTVEGVQNLGDKAVMCH 186

Query:   198 GLNFRTAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGT 377
             GLNFRTAVFYCHKVRETTAF+VPLVAGDGTKTQALAVCHSDTSGMNHH+LHELMGVDPGT
Sbjct:   187 GLNFRTAVFYCHKVRETTAFVVPLVAGDGTKTQALAVCHSDTSGMNHHILHELMGVDPGT 246

Query:   378 NPVCHFLGSKAILWVPNISMDTAYQTNVVV 467
             NPVCHFLGSKAILWVPNISMDTAYQTNVVV
Sbjct:   247 NPVCHFLGSKAILWVPNISMDTAYQTNVVV 276


to_Entrezto_Relatedto_Related >gi|485515|pir||S33622  ADR6 protein - soybean >gi|296445|emb|CAA49340.1|
            (X69639) auxin down regulated [Glycine max]
            >gi|2304955|gb|AAB65592.1| (U64866) similar to ADR6 encoded by
            GenBank Accession Number X69639; aluminum induced [Glycine max]
            Length = 272

Frame  3 hits (HSPs):                         ____________________________
Annotated Domains:         _____________________________________________  
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 272
                       0        50      100      150      200      250
__________________

Annotated Domains:
   DOMO                 DM02982:                                 18..258
__________________


  Plus Strand HSPs:

 Score = 739 (260.1 bits), Expect = 3.7e-72, P = 3.7e-72
 Identities = 137/149 (91%), Positives = 146/149 (97%), Frame = +3

Query:    18 KEAFEGEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFVNKQEQYTVEGVQNLGDKAVMCH 197
             KEA EGEEKFCAKSLGTVIGFAISKLGKNI+VLSSSFVNKQ+QYTVEGVQNLGDKAVMCH
Sbjct:   123 KEAIEGEEKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQDQYTVEGVQNLGDKAVMCH 182

Query:   198 GLNFRTAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGT 377
              LNFRTAVFYCH+VRETTAFMVPLVAGDGTKTQALA+CHS+TSGMNH MLH+LMGVDPGT
Sbjct:   183 RLNFRTAVFYCHEVRETTAFMVPLVAGDGTKTQALAICHSNTSGMNHQMLHQLMGVDPGT 242

Query:   378 NPVCHFLGSKAILWVPNISMDTAYQTNVV 464
             NPVCHFLGSKAILWVPN+S+DTAYQTN+V
Sbjct:   243 NPVCHFLGSKAILWVPNLSVDTAYQTNIV 271


to_Entrezto_Relatedto_Related >gi|119097|sp|P21747|EA92_VICFA  EMBRYONIC ABUNDANT PROTEIN USP92 PRECURSOR
            >gi|82002|pir||S04136 embryonic abundant protein precursor (clone
            pUSP92) - tick bean >gi|22051|emb|CAA31602.1| (X13210) USP
            precursor [Vicia faba]
            Length = 268

Frame  3 hits (HSPs):                          __________________________ 
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250
__________________

Annotated Domains:
   Entrez               Domain: 3 X 6 AA APPROXIMATE REPEATS.    50..106
   Entrez               Repetitive region: 1-1.                  50..55
   Entrez               Repetitive region: 1-2.                  83..88
   Entrez               Repetitive region: 1-3.                  101..106
   Entrez               Domain: 2 X APPROXIMATE REPEATS.         166..222
   Entrez               Repetitive region: 2-1.                  166..183
   Entrez               Repetitive region: 2-2.                  202..222
   Entrez               glycosylation site: POTENTIAL.           259
   PRODOM               PD009870:                                1..79
   PRODOM               PD013884:                                86..126
   PRODOM               PD004669:                                128..256
__________________


  Plus Strand HSPs:

 Score = 402 (141.5 bits), Expect = 1.9e-36, P = 1.9e-36
 Identities = 77/136 (56%), Positives = 95/136 (69%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ +GD AVMCH LNF 
Sbjct:   128 EHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVMCHRLNFE 187

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+VRETTA++V LVA DGTKT+AL VCH DT GMN  +L+E + V PGT PVCH
Sbjct:   188 KVVFNCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGMNPELLYEALEVTPGTVPVCH 247

Query:   393 FLGSKAILWVPNISMD 440
             F+G+KA  WVPN + D
Sbjct:   248 FIGNKAAAWVPNHTAD 263


to_Entrezto_Relatedto_Related >gi|100102|pir||S14068  seed protein precursor - tick bean
            >gi|22043|emb|CAA39696.1| (X56240) unknown seed protein [Vicia
            faba]
            Length = 268

Frame  3 hits (HSPs):                          __________________________ 
Annotated Domains:      ____                                              
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250
__________________

Annotated Domains:
   Entrez               domain: signal sequence                  1..22
__________________


  Plus Strand HSPs:

 Score = 399 (140.5 bits), Expect = 3.9e-36, P = 3.9e-36
 Identities = 76/136 (55%), Positives = 95/136 (69%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ +GD AVMCH LNF 
Sbjct:   128 EHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVMCHRLNFE 187

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+VR+TTA++V LVA DGTKT+AL VCH DT GMN  +L+E + V PGT PVCH
Sbjct:   188 KVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPELLYEALEVTPGTVPVCH 247

Query:   393 FLGSKAILWVPNISMD 440
             F+G+KA  WVPN + D
Sbjct:   248 FIGNKAAAWVPNHTAD 263


to_Entrezto_Relatedto_Related >gi|119095|sp|P21745|EA30_VICFA  EMBRYONIC ABUNDANT PROTEIN VF30.1 PRECURSOR
            >gi|82003|pir||S05471 embryonic abundant protein precursor (clone
            USP Vf30.1) - tick bean
            Length = 268

Frame  3 hits (HSPs):                          __________________________ 
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250
__________________

Annotated Domains:
   DOMO                 DM02982:                                 17..258
   Entrez               Domain: 3 X 6 AA APPROXIMATE REPEATS.    50..106
   Entrez               Repetitive region: 1-1.                  50..55
   Entrez               Repetitive region: 1-2.                  83..88
   Entrez               Repetitive region: 1-3.                  101..106
   Entrez               Domain: 2 X APPROXIMATE REPEATS.         166..222
   Entrez               Repetitive region: 2-1.                  166..183
   Entrez               Repetitive region: 2-2.                  202..222
   Entrez               glycosylation site: POTENTIAL.           259
   PRODOM               PD009870:                                1..79
   PRODOM               PD013884:                                86..126
   PRODOM               PD004669:                                128..256
__________________


  Plus Strand HSPs:

 Score = 399 (140.5 bits), Expect = 3.9e-36, P = 3.9e-36
 Identities = 76/136 (55%), Positives = 95/136 (69%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ +GD AVMCH LNF 
Sbjct:   128 EHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVMCHRLNFE 187

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+VR+TTA++V LVA DGTKT+AL VCH DT GMN  +L+E + V PGT PVCH
Sbjct:   188 KVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPELLYEALEVTPGTVPVCH 247

Query:   393 FLGSKAILWVPNISMD 440
             F+G+KA  WVPN + D
Sbjct:   248 FIGNKAAAWVPNHTAD 263


to_Entrezto_Relatedto_Related >gi|135067|sp|P09059|SVF3_VICFA  UNKNOWN SEED PROTEIN 30.1 PRECURSOR (VF30.1)
            >gi|82000|pir||S03328 embryonic abundant protein precursor (clone
            pUSP14) - tick bean >gi|22046|emb|CAA31626.1| (X13242) seed protein
            [Vicia faba]
            Length = 268

Frame  3 hits (HSPs):                          __________________________ 
Annotated Domains:      ________________________________________________  
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250
__________________

Annotated Domains:
   PRODOM               PD009870:                                1..79
   PRODOM               PD013884:                                86..126
   PRODOM               PD004669:                                128..256
__________________


  Plus Strand HSPs:

 Score = 389 (136.9 bits), Expect = 4.5e-35, P = 4.5e-35
 Identities = 75/136 (55%), Positives = 94/136 (69%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ +GD AVMCH LNF 
Sbjct:   128 EHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVMCHRLNFE 187

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+VR+TTA++V LVA DGTKT+AL VCH DT GMN  +L+E + V  GT PVCH
Sbjct:   188 KVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPELLYEALEVTLGTVPVCH 247

Query:   393 FLGSKAILWVPNISMD 440
             F+G+KA  WVPN + D
Sbjct:   248 FIGNKAAAWVPNHTAD 263


to_Entrezto_Relatedto_Related >gi|119096|sp|P21746|EA87_VICFA  EMBRYONIC ABUNDANT PROTEIN USP87 PRECURSOR
            >gi|82001|pir||S04135 embryonic abundant protein precursor (clone
            pUSP87) - tick bean >gi|22049|emb|CAA31603.1| (X13211) USP
            precursor [Vicia faba]
            Length = 268

Frame  3 hits (HSPs):                          __________________________ 
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250
__________________

Annotated Domains:
   Entrez               Domain: 3 X 6 AA APPROXIMATE REPEATS.    50..106
   Entrez               Repetitive region: 1-1.                  50..55
   Entrez               Repetitive region: 1-2.                  83..88
   Entrez               Repetitive region: 1-3.                  101..106
   Entrez               Domain: 2 X APPROXIMATE REPEATS.         166..222
   Entrez               Repetitive region: 2-1.                  166..183
   Entrez               Repetitive region: 2-2.                  202..222
   Entrez               glycosylation site: POTENTIAL.           259
   PRODOM               PD009870:                                1..79
   PRODOM               PD013884:                                86..126
   PRODOM               PD004669:                                128..256
__________________


  Plus Strand HSPs:

 Score = 389 (136.9 bits), Expect = 4.5e-35, P = 4.5e-35
 Identities = 75/136 (55%), Positives = 94/136 (69%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ +GD AVMCH LNF 
Sbjct:   128 EHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVMCHRLNFE 187

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+VR+TTA++V LVA DGTKT+AL VCH DT GMN  +L+E + V  GT PVCH
Sbjct:   188 KVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPELLYEALEVTLGTVPVCH 247

Query:   393 FLGSKAILWVPNISMD 440
             F+G+KA  WVPN + D
Sbjct:   248 FIGNKAAAWVPNHTAD 263


to_Entrezto_Relatedto_Related >gi|2129886|pir||S70755  hypothetical protein - garden pea
            >gi|20914|emb|CAA38756.1| (X55012) unknown seed protein [Pisum
            sativum]
            Length = 221

Frame  3 hits (HSPs):                        _____________________________
                        __________________________________________________
Database sequence:     |           |          |          |           |    | 221
                       0          50        100        150         200

  Plus Strand HSPs:

 Score = 360 (126.7 bits), Expect = 5.3e-32, P = 5.3e-32
 Identities = 69/126 (54%), Positives = 86/126 (68%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G   I+ +SS+F   Q+QY VE V+ + + AVMCH LNF 
Sbjct:    94 EHKHCVSSLNSMIDEVISHFGTTKIKAISSNFAQNQDQYDVEEVKKVSENAVMCHRLNFE 153

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+V +TTA+MV LVA DGTKT AL VCH DT GMN  +L+E + V PGT PVCH
Sbjct:   154 NVVFNCHQVSKTTAYMVSLVASDGTKTNALTVCHHDTRGMNPELLYEALQVTPGTVPVCH 213

Query:   393 FLGSKA 410
             F+G+KA
Sbjct:   214 FIGNKA 219


to_Entrezto_Relatedto_Related >gi|7488827|pir||T06815  probable embryonic abundant protein - garden pea
            (fragment) >gi|20912|emb|CAA38755.1| (X55011) internal part of  pea
            Unknown Seed Protein (USP) [Pisum sativum]
            Length = 221

Frame  3 hits (HSPs):                        _____________________________
                        __________________________________________________
Database sequence:     |           |          |          |           |    | 221
                       0          50        100        150         200

  Plus Strand HSPs:

 Score = 320 (112.6 bits), Expect = 9.2e-28, P = 9.2e-28
 Identities = 64/126 (50%), Positives = 82/126 (65%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKN-IRVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFR 212
             E K C  SL ++I   IS  G+  I+ +SS+    Q+QY  E V+ + + AVMCH LN  
Sbjct:    94 EHKHCVSSLNSMIDEVISHFGQTKIKAISSNSAQNQDQYAWEEVKIVTENAVMCHRLNSD 153

Query:   213 TAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMNHHMLHELMGVDPGTNPVCH 392
               VF CH+V +TTA+MV LVA DG KT  L VCH DT GMN  +L+E + V PGT PVCH
Sbjct:   154 NVVFNCHQVSKTTAYMVSLVASDGYKTNDLTVCHHDTRGMNPELLYEALQVTPGTVPVCH 213

Query:   393 FLGSKA 410
             F+G+KA
Sbjct:   214 FIGNKA 219


to_Entrezto_Relatedto_Related >gi|1172874|sp|Q08298|RD22_ARATH  DEHYDRATION-RESPONSIVE PROTEIN RD22 PRECURSOR
            >gi|479589|pir||S34823 dehydration-induced protein RD22 -
            Arabidopsis thaliana >gi|391608|dbj|BAA01546.1| (D10703) rd22
            [Arabidopsis thaliana] >gi|447134|prf||1913421A rd22 gene
            [Arabidopsis thaliana]
            Length = 392

Frame  3 hits (HSPs):                                   __________________
Annotated Domains:      __________________________________________________
                        __________________________________________________
Database sequence:     |                   |                  |           | 392
                       0                 150                300
__________________

Annotated Domains:
   DOMO                 DM02982:                                 118..391
   Entrez               Domain: 5 X APPROXIMATE REPEATS.         57..164
   Entrez               Repetitive region: 1.                    57..75
   Entrez               Repetitive region: 2.                    78..97
   Entrez               Repetitive region: 3.                    100..120
   Entrez               Repetitive region: 4.                    125..142
   Entrez               Repetitive region: 5.                    145..164
   PRODOM               PD122867: RD22_ARATH                     1..167
   PRODOM               PD004669:                                169..390
__________________


  Plus Strand HSPs:

 Score = 297 (104.5 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 59/137 (43%), Positives = 89/137 (64%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGK-NIRVLSSSFVNKQ---EQYTVE--GVQNLGD-KAVM 191
             GEEK+CA SL +++ F++SKLGK ++R +S+    K    ++Y +   GV+ L D K+V+
Sbjct:   253 GEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVV 312

Query:   192 CHGLNFRTAVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMN-HHMLHELMGVD 368
             CH   +  AVFYCHK   TT + VPL   +G + +A+AVCH +TS  N +H+  +++ V 
Sbjct:   313 CHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVK 372

Query:   369 PGTNPVCHFLGSKAILW 419
             PGT PVCHFL    ++W
Sbjct:   373 PGTVPVCHFLPETHVVW 389


to_Entrezto_Relatedto_Related >gi|7106540|dbj|BAA92225.1|  (AB038692) similar to the BURP domain [Vigna
            unguiculata]
            Length = 132

Frame  3 hits (HSPs):   _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                  |            | 132
                       0                 50                100

  Plus Strand HSPs:

 Score = 291 (102.4 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 60/129 (46%), Positives = 87/129 (67%), Frame = +3

Query:    51 AKSLGTVIGFAISKLGKNIRVLSSSFVNKQ---EQYTVE-GVQNL-GDKAVMCHGLNFRT 215
             A SL +++ F+ SKLGKN+ VLS+  V+++   +QYT+  GV+ + GD AV+CH  ++  
Sbjct:     2 ATSLESMVDFSTSKLGKNVAVLSTE-VDQETGLQQYTIAPGVKKVSGDNAVVCHKQSYPY 60

Query:   216 AVFYCHKVRETTAFMVPLVAGDGTKTQALAVCHSDTSGMN-HHMLHELMGVDPGTNPVCH 392
             AVFYCHK   T  + VPL   +G + +A+AVCH+DTS  N  H+  E++ V PGT PVCH
Sbjct:    61 AVFYCHKTETTRTYPVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCH 120

Query:   393 FLGSKAILWV 422
             FL    ++WV
Sbjct:   121 FLPEDHVVWV 130


to_Entrezto_Relatedto_Related >gi|5257263|dbj|BAA81762.1|  (AP000364) EST AU029260(E30024) corresponds to a
            region of the predicted gene.; Similar to Arabidopsis thaliana rd22
            gene. (D10703) [Oryza sativa]
            Length = 413

Frame  3 hits (HSPs):                                   __________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 413
                       0                150               300

  Plus Strand HSPs:

 Score = 201 (70.8 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 51/148 (34%), Positives = 76/148 (51%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLG-KNIRVLSSSFVN---KQEQYTVEGVQNL-GDKAVMCH 197
             GE KFCA SL  ++  A++ LG ++I  L+S+        + Y V  V  + G   V CH
Sbjct:   266 GESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRAVLPVEGAGFVACH 325

Query:   198 GLNFRTAVFYCHKVRETTAFMVPLVA---GDGTKTQALA-VCHSDTSGMN-HHMLHELMG 362
                +   V+ CH      A+MV +     GDG +   +A VCH++TS  N  H+  +L+G
Sbjct:   326 DQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLG 385

Query:   363 VDPGTNPVCHFLGSKAILWVPNISMDTA 446
               PG +PVCH +    I+W  N+   TA
Sbjct:   386 TKPGGSPVCHLMPYGHIVWAKNVKSSTA 413


to_Entrezto_Relatedto_Related >gi|5430766|gb|AAD43166.1|AC007504_21  (AC007504) Putative BURP domain
            containing protein [Arabidopsis thaliana]
            Length = 280

Frame  3 hits (HSPs):                         ____________________________
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 280
                       0       50      100      150      200      250

  Plus Strand HSPs:

 Score = 186 (65.5 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 53/154 (34%), Positives = 79/154 (51%), Frame = +3

Query:     6 GASXKEAFEGEEKFCAKSLGTVIGFAISKLGKNI--RVLSSS-FVNKQEQ-------YT- 152
             G    +A EGE KFC  SL ++I      +G N+  +V+++   V  Q         YT 
Sbjct:   125 GHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVPAQNSISYALHNYTF 184

Query:   153 VEGVQNL-GDKAVMCHGLNFRTAVFYCHKVRE-TTAFMVPLVAGDGT-KTQALAVCHSDT 323
             VE  + L G K + CH + +  AV+YCH  +  +  F V LV  DG  +    AVCH DT
Sbjct:   185 VEAPKELVGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDGRQRVVGPAVCHMDT 244

Query:   324 SGMN-HHMLHELMGVDPGTNPVCHFLGSKAILWV 422
             S  +  H+  +++ ++P + PVCHF     I+WV
Sbjct:   245 STWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWV 278


to_Entrezto_Relatedto_Related >gi|7488443|pir||T07844  BURP domain-containing protein - rape
            >gi|3098571|gb|AAC15700.1| (AF049028) BURP domain containing
            protein [Brassica napus]
            Length = 282

Frame  3 hits (HSPs):                          ___________________________
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 282
                       0       50      100      150      200      250

  Plus Strand HSPs:

 Score = 180 (63.4 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 50/149 (33%), Positives = 78/149 (52%), Frame = +3

Query:    21 EAFEGEEKFCAKSLGTVIGFAISKLGKN--IRVLSSS-FVNKQEQ-------YTVEGV-Q 167
             +A EGE KFC  SL +++  A   +  N  ++V+++   V  Q +       YT   V +
Sbjct:   132 KAIEGEYKFCGTSLESMLDLAKKTIASNADLKVMTTKVMVPDQNRISYALHNYTFAEVPK 191

Query:   168 NL-GDKAVMCHGLNFRTAVFYCHKVRE-TTAFMVPLVAGDGTK-TQALAVCHSDTSGMN- 335
              L G K + CH + +   V+YCH  +  T  F V L++ DG +     AVCH DTS  N 
Sbjct:   192 ELDGIKVLGCHRMPYPYVVYYCHGHKSGTKVFEVNLMSDDGIQLVVGPAVCHMDTSMWNA 251

Query:   336 HHMLHELMGVDPGTNPVCHFLGSKAILWV 422
              H+  +++ ++P + PVCHF     I+WV
Sbjct:   252 DHVAFKVLKIEPRSAPVCHFFPLDNIVWV 280


to_Entrezto_Relatedto_Related >gi|7489022|pir||T07178  hypothetical protein SEND35, senescence down-regulated
            - tomato (fragment) >gi|1418986|emb|CAA99758.1| (Z75522) unknown
            [Lycopersicon esculentum]
            Length = 91

Frame  3 hits (HSPs):           _____________________________________     
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 91
                       0         20         40         60         80

  Plus Strand HSPs:

 Score = 174 (61.3 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 32/67 (47%), Positives = 46/67 (68%), Frame = +3

Query:   135 KQEQYTVEGVQNLG---DKAVMCHGLNFRTAVFYCHKVRETTAFMVPLVAGDGTKTQALA 305
             + ++YT+ G + +G   DK+V+CH  N+  AVFYCHK   T ++MV LV  DG+K +A+A
Sbjct:    16 EMQKYTILGAKKMGNNNDKSVVCHKQNYAYAVFYCHKTETTESYMVSLVGVDGSKVKAVA 75

Query:   306 VCHSDTS 326
             VCH  TS
Sbjct:    76 VCHKGTS 82


to_Entrezto_Relatedto_Related >gi|7489056|pir||T07587  probable polygalacturonase (EC 3.2.1.15) 1 - tomato
            >gi|1762636|gb|AAB39557.1| (U64790) AROGP3 [Lycopersicon
            esculentum]
            Length = 632

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 632
                       0         150         300         450         600

  Plus Strand HSPs:

 Score = 151 (53.2 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 39/137 (28%), Positives = 65/137 (47%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFVNKQEQY----TVEGVQNLGD--KAVMC 194
             GE K C  S   +I FA S LG+N+ V ++   N  +      +++G+ N G   K+V C
Sbjct:   492 GETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGI-NGGKVTKSVSC 550

Query:   195 HGLNFRTAVFYCHKVRETTAFMVPLVAGDGTK--TQALAVCHSDTSGMN-HHMLHELMGV 365
             H   + + ++YCH V +   +   ++  +        +A+CH DTS     H     +G 
Sbjct:   551 HQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGS 610

Query:   366 DPGTNPVCHFLGSKAILW 419
              PG   VCH++    + W
Sbjct:   611 GPGKIEVCHWIFENDMTW 628


to_Entrezto_Relatedto_Related >gi|7488154|pir||T02289  probable polygalacturonase (EC 3.2.1.15) 1 beta chain
            T13D8.26 - Arabidopsis thaliana >gi|3249081|gb|AAC24065.1|
            (AC004473) Strong similarity to AR0GP2 gene gb|1762634 from
            Lycopersicon esculentum. [Arabidopsis thaliana]
            Length = 624

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 624
                       0         150         300         450         600

  Plus Strand HSPs:

 Score = 150 (52.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 40/142 (28%), Positives = 66/142 (46%), Frame = +3

Query:    18 KEAFEGEEKFCAKSLGTVIGFAISKLGKNIRVLSS-SFVNKQEQYTVEGVQNL--GD--K 182
             + A  GE K C  S   +I FA S LG+ + V ++ + V  +++  +  V  +  GD  +
Sbjct:   479 RPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTR 538

Query:   183 AVMCHGLNFRTAVFYCHKVRETTAFMVPLVAGDGTK--TQALAVCHSDTSGMN-HHMLHE 353
             AV CH   +   ++YCH V     +   L+     +     +A+CH DTS  +  H    
Sbjct:   539 AVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFL 598

Query:   354 LMGVDPGTNPVCHFLGSKAILW 419
              +G  PG   VCH++    + W
Sbjct:   599 ALGSGPGQIEVCHWIFENDMTW 620


to_Entrezto_Relatedto_Related >gi|7489055|pir||T07426  probable polygalacturonase (EC 3.2.1.15) 1 - tomato
            >gi|1762634|gb|AAB39556.1| (U64789) AROGP2 [Lycopersicon
            esculentum]
            Length = 629

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 629
                       0         150         300         450         600

  Plus Strand HSPs:

 Score = 150 (52.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 39/137 (28%), Positives = 65/137 (47%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFVNKQEQY----TVEGVQNLGD--KAVMC 194
             GE K C  S   +I FA S LG+N+ V ++   N  +      +++G+ N G   K+V C
Sbjct:   489 GETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGI-NGGKVTKSVSC 547

Query:   195 HGLNFRTAVFYCHKVRETTAFMVPLVAGDGTK--TQALAVCHSDTSGMN-HHMLHELMGV 365
             H   + + ++YCH V +   +   ++  +        +A+CH DTS     H     +G 
Sbjct:   548 HQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGS 607

Query:   366 DPGTNPVCHFLGSKAILW 419
              PG   VCH++    + W
Sbjct:   608 GPGKIEVCHWIFENDMTW 625


to_Entrezto_Relatedto_Related >gi|1762584|gb|AAB39546.1|  (U63373) polygalacturonase isoenzyme 1 beta subunit
            homolog [Arabidopsis thaliana]
            Length = 626

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 626
                       0         150         300         450         600

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 39/137 (28%), Positives = 63/137 (45%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFV-NKQEQYTVEGVQNLGD----KAVMCH 197
             GE K C  S   +I FA S LG+++ + ++  V   +E+  +  V  +      KAV CH
Sbjct:   486 GETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCH 545

Query:   198 GLNFRTAVFYCHKVRETTAFMVPLVAGDGTK--TQALAVCHSDTSGMN-HHMLHELMGVD 368
                +   ++YCH V +   +   L+  +  K     +A+CH DTS     H     +G  
Sbjct:   546 QSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSK 605

Query:   369 PGTNPVCHFLGSKAILW 419
             PG   VCH++    + W
Sbjct:   606 PGRIEVCHWIFENDMNW 622


to_Entrezto_Relatedto_Related >gi|7488153|pir||T01485  probable polygalacturonase (EC 3.2.1.15) 1 beta chain
            F17O7.9 - Arabidopsis thaliana >gi|3176680|gb|AAC18803.1|
            (AC003671) Identical to polygalacuronase isoenzyme 1 beta subunit
            homolog mRNA gb|U63373.  EST gb|AA404878 comes from this gene.
            [Arabidopsis thaliana]
            Length = 626

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 626
                       0         150         300         450         600

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 39/137 (28%), Positives = 63/137 (45%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFV-NKQEQYTVEGVQNLGD----KAVMCH 197
             GE K C  S   +I FA S LG+++ + ++  V   +E+  +  V  +      KAV CH
Sbjct:   486 GETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCH 545

Query:   198 GLNFRTAVFYCHKVRETTAFMVPLVAGDGTK--TQALAVCHSDTSGMN-HHMLHELMGVD 368
                +   ++YCH V +   +   L+  +  K     +A+CH DTS     H     +G  
Sbjct:   546 QSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSK 605

Query:   369 PGTNPVCHFLGSKAILW 419
             PG   VCH++    + W
Sbjct:   606 PGRIEVCHWIFENDMNW 622


to_Entrezto_Relatedto_Related >gi|1762428|gb|AAB39538.1|  (U59467) aromatic rich glycoprotein JP630
            [Arabidopsis thaliana]
            Length = 622

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |            |           |           | | 622
                       0         150          300         450         600

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 39/136 (28%), Positives = 63/136 (46%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKNIRVLSS-SFVNKQEQYTVEGVQNLGD----KAVMCHG 200
             E K C  S   +I FA S LG+++ + ++ S    +E+  +  V  +      K+V CH 
Sbjct:   483 ETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQ 542

Query:   201 LNFRTAVFYCHKVRETTAFMVPLV--AGDGTKTQALAVCHSDTS--GMNHHMLHELMGVD 368
               +   ++YCH V +   +   L+           +A+CH DTS  G NH     L+G  
Sbjct:   543 SLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFM-LLGSR 601

Query:   369 PGTNPVCHFLGSKAILW 419
             PG   VCH++    + W
Sbjct:   602 PGQIEVCHWIFENDMNW 618


to_Entrezto_Relatedto_Related >gi|4056458|gb|AAC98031.1|  (AC005990) Identical to gb|ATU59467 aromatic rich
            glycoprotein which is strongly similar to gb|U63373
            polygalacturonase isozyme 1 from Arabidopsis thaliana.  EST
            gb|AA395212 comes from this gene
            Length = 622

Frame  3 hits (HSPs):                                         ____________
                        __________________________________________________
Database sequence:     |           |            |           |           | | 622
                       0         150          300         450         600

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 39/136 (28%), Positives = 63/136 (46%), Frame = +3

Query:    36 EEKFCAKSLGTVIGFAISKLGKNIRVLSS-SFVNKQEQYTVEGVQNLGD----KAVMCHG 200
             E K C  S   +I FA S LG+++ + ++ S    +E+  +  V  +      K+V CH 
Sbjct:   483 ETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQ 542

Query:   201 LNFRTAVFYCHKVRETTAFMVPLV--AGDGTKTQALAVCHSDTS--GMNHHMLHELMGVD 368
               +   ++YCH V +   +   L+           +A+CH DTS  G NH     L+G  
Sbjct:   543 SLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFM-LLGSR 601

Query:   369 PGTNPVCHFLGSKAILW 419
             PG   VCH++    + W
Sbjct:   602 PGQIEVCHWIFENDMNW 618


to_Entrezto_Relatedto_Relatedto_ec >gi|320585|pir||JQ1670  polygalacturonase (EC 3.2.1.15) 1 beta chain precursor -
            tomato >gi|170480|gb|AAA34181.1| (M98466) polygalacturonase
            isoenzyme 1 beta subunit [Lycopersicon esculentum]
            >gi|1762586|gb|AAB39547.1| (U63374) polygalacturonase isoenzyme 1
            beta subunit [Lycopersicon esculentum]
            Length = 630

Frame  3 hits (HSPs):                                         ____________
Annotated Domains:      __________________________________________________
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 630
                       0         150         300         450         600
__________________

Annotated Domains:
   DOMO                 DM02622:                                 135..173
   DOMO                 DM02622:                                 175..215
   DOMO                 DM02622:                                 217..257
   DOMO                 DM02622:                                 259..306
   DOMO                 DM02622:                                 308..353
   DOMO                 DM02982:                                 355..628
   Entrez               domain: signal sequence                  1..30
   Entrez               domain: amino-terminal propeptide        31..108
   Entrez               domain: carboxyl-terminal propeptide     398..630
   Entrez               binding site: carbohydrate (Asn) (covale 124
   Entrez               binding site: carbohydrate (Asn) (covale 142
   Entrez               binding site: carbohydrate (Asn) (covale 256
   Entrez               binding site: carbohydrate (Asn) (covale 334
   Entrez               binding site: carbohydrate (Asn) (covale 369
   Entrez               binding site: carbohydrate (Asn) (covale 387
__________________


  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 40/137 (29%), Positives = 63/137 (45%), Frame = +3

Query:    33 GEEKFCAKSLGTVIGFAISKLGKNIRVLSSSFVNKQEQY----TVEGVQNLGD--KAVMC 194
             GE K C  S   +I FA S LG+N+ V ++             +V+G+ N G   K+V C
Sbjct:   490 GETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGI-NGGKVTKSVSC 548

Query:   195 HGLNFRTAVFYCHKVRETTAFMVPLVAGDG-TK-TQALAVCHSDTSGMN-HHMLHELMGV 365
             H   +   ++YCH V +   +   ++  +   K    +A+CH DTS     H     +G 
Sbjct:   549 HQTLYPYLLYYCHSVPKVRVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGS 608

Query:   366 DPGTNPVCHFLGSKAILW 419
              PG   VCH++    + W
Sbjct:   609 GPGKIEVCHWIFENDMTW 626


to_Entrezto_Relatedto_Related >gi|4091010|gb|AAC99621.1|  (AF042275) anther-specific protein [Oryza sativa]
            Length = 264

Frame  3 hits (HSPs):                                 ___________________ 
                        __________________________________________________
Database sequence:     |         |        |         |        |         |  | 264
                       0        50      100       150      200       250

  Plus Strand HSPs:

 Score = 99 (34.8 bits), Expect = 0.066, P = 0.063
 Identities = 33/96 (34%), Positives = 42/96 (43%), Frame = +3

Query:   147 YTVEGVQNL-GDKAVMCHGLNFRTA-VFYC-HKVR-ETTAFMVPLVAGDGTKTQ-ALAVC 311
             YTV  V+ + G   V+C G     A V+ C H       A+ V    G G     A  VC
Sbjct:   164 YTVRSVRAIEGSSFVVCRGETTAGAGVYGCRHAATGPARAYAVDAAGGGGGDAVIAAVVC 223

Query:   312 HSDTSGMN-HHMLHELMGVDPGTNPVCHFLGSKAIL 416
             H+DTS  +  H    L+GV PG   VC  +    IL
Sbjct:   224 HADTSRWDPDHAAFRLLGVRPGGAAVCRAVADAHIL 259


to_Entrezto_Relatedto_Related >gi|7716012|gb|AAF68251.1|AF206524_2  (AF206524) seroreactive antigen BMN1-13B
            [Babesia microti]
            Length = 91

Frame -3 hits (HSPs):                      _____________________          
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 91
                       0         20         40         60         80

  Minus Strand HSPs:

 Score = 70 (24.6 bits), Expect = 0.94, P = 0.61
 Identities = 13/37 (35%), Positives = 25/37 (67%), Frame = -3

Query:   443 SVHRYIGYP*NGLASKEMANRVSSRINSHEFMKHVMI 333
             +V  +IGYP  G  ++E  N + +RI+++ + KHV++
Sbjct:    36 AVELFIGYPPFGSTTEEPNNVIMNRIHTYHWTKHVLL 72


to_Entrezto_Related >gi|6324405  ref|NP_014475.1| Ynr077cp [Saccharomyces cerevisiae]
            >gi|1730703|sp|P53758|YN9D_YEAST HYPOTHETICAL 9.7 KD PROTEIN IN
            PAU6 3'REGION >gi|2131985|pir||S63410 hypothetical protein YNR077c
            - yeast (Saccharomyces cerevisiae) >gi|1302618|emb|CAA96361.1|
            (Z71692) ORF YNR077c [Saccharomyces cerevisiae]
            Length = 84

Frame -3 hits (HSPs):             _____________________________________   
                        __________________________________________________
Database sequence:     |           |           |           |           |  | 84
                       0          20          40          60          80

  Minus Strand HSPs:

 Score = 61 (21.5 bits), Expect = 9.4, P = 1.0
 Identities = 16/62 (25%), Positives = 31/62 (50%), Frame = -3

Query:   275 SHQWNHESCCFTDFMAVKYC----SSEI*PMTHHCFVSKILHSFHSVLLLLIDKGT*KYS 108
             SH + H +  +  F   KYC    ++ + P+ HH   ++ +H++ ++      K   K+ 
Sbjct:    18 SHDYPHFNI-YISFGGPKYCITALNTYVIPLLHHILTTQFIHTYFNIPTKSPPKSP-KHK 75

Query:   107 NVLS 96
             N LS
Sbjct:    76 NYLS 79


to_Entrezto_Relatedto_Related >gi|2769725|gb|AAC40337.1|  (U92288) H88 [Human herpesvirus 6]
            Length = 40

Frame  2 hits (HSPs):             ________________________________        
                        __________________________________________________
Database sequence:     |                       |                          | 40
                       0                      20

  Plus Strand HSPs:

 Score = 61 (21.5 bits), Expect = 9.5, P = 1.0
 Identities = 13/30 (43%), Positives = 18/30 (60%), Frame = +2

Query:   461 CCLISPCICILGTIRLYIK*IMVCCVC-CAR 550
             CC+   C+C+L    L +  + VCCVC C R
Sbjct:     9 CCVCVCCVCVLC---LCV--VFVCCVCVCER 34


Parameters:
  filter=none
  matrix=BLOSUM62
  V=50
  B=50
  E=10
  gi
  H=1
  sort_by_pvalue
  echofilter

  ctxfactor=5.99

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.333   0.142   0.465  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.354   0.157   0.656  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.348   0.152   0.554  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.348   0.145   0.499  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.344   0.152   0.541  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.349   0.150   0.535  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      206       205       10.  77 3  12 22  0.097   35
                                                    31  0.11    38
   +2      0      207       206       10.  77 3  12 22  0.097   35
                                                    31  0.11    38
   +1      0      207       206       10.  77 3  12 22  0.097   35
                                                    31  0.11    38
   -1      0      207       206       10.  77 3  12 22  0.097   35
                                                    31  0.11    38
   -2      0      207       206       10.  77 3  12 22  0.097   35
                                                    31  0.11    38
   -3      0      206       205       10.  77 3  12 22  0.097   35
                                                    31  0.11    38


Statistics:

  Database:  /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
    Title:  nr
    Release date:  unknown
    Posted date:  4:06 PM CST Feb 28, 2001
    Format:  BLAST
  # of letters in database:  197,782,623
  # of sequences in database:  625,274
  # of database sequences satisfying E:  27
  No. of states in DFA:  598 (59 KB)
  Total size of DFA:  269 KB (320 KB)
  Time to generate neighborhood:  0.02u 0.01s 0.03t  Elapsed: 00:00:00
  No. of threads or processors used:  6
  Search cpu time:  274.13u 1.22s 275.35t  Elapsed: 00:02:35
  Total cpu time:  274.17u 1.27s 275.44t  Elapsed: 00:02:35
  Start:  Wed Jan 23 19:57:15 2002   End:  Wed Jan 23 19:59:50 2002



Annotated Domains Database:   March 14, 2000 

Release Date:  March 14, 2000