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UGID:910834     UniGene Hs.520087     Homo sapiens (human)   PACSIN1 Order cDNA clone, Links
Protein kinase C and casein kinase substrate in neurons 1, mRNA (cDNA clone MGC:34644 IMAGE:5173129) (PACSIN1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_065855.1 protein kinase C and casein kinase substrate in neurons 1 H. sapiens 100.0 443
NP_848142.1 protein kinase C and casein kinase substrate in neurons 1 M. musculus 96.2 440
NP_001028900.1 protein kinase C and casein kinase substrate in neurons 1 D. rerio 81.1 444
NP_001087407.1 MGC84055 protein X. laevis 76.8 444
NP_788697.1 Syndapin CG33094-PB D. melanogaster 47.8 479

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; mixed; lung; embryonic tissue; lymph node; uncharacterized tissue; uterus; nerve; prostate; lymph; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: Chr 6 A001Z37
UniSTS entry: Chr 6 RH77896
UniSTS entry: Chr 6 A009Q41
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AB037800.2 Homo sapiens mRNA for KIAA1379 protein, partial cds P
CR612772.1 full-length cDNA clone CS0DN005YF14 of Adult brain of Homo sapiens (human)
AF242529.1 Homo sapiens protein kinase C and casein kinase substrate 1 (PACSIN1) mRNA, complete cds PA
BC128219.1 Homo sapiens protein kinase C and casein kinase substrate in neurons 1, mRNA (cDNA clone IMAGE:40114535), partial cds P
BC128220.1 Homo sapiens cDNA clone IMAGE:40114538 P
AK289956.1 Homo sapiens cDNA FLJ75595 complete cds, highly similar to Homo sapiens protein kinase C and casein kinase substrate in neurons 1 (PACSIN1), mRNA P
AL834211.1 Homo sapiens mRNA; cDNA DKFZp761O232 (from clone DKFZp761O232) PA
AK294132.1 Homo sapiens cDNA FLJ56965 complete cds, highly similar to Protein kinase C and casein kinase substratein neurons protein 1 P
NM_020804.2 Homo sapiens protein kinase C and casein kinase substrate in neurons 1 (PACSIN1), mRNA PA
BC040228.1 Homo sapiens protein kinase C and casein kinase substrate in neurons 1, mRNA (cDNA clone MGC:34644 IMAGE:5173129), complete cds PA

EST sequences (118)

AI017889.1 Clone IMAGE:1628295 mixed 3' read P
BX094526.1 Clone IMAGp998E07668_;_IMAGE:298734 lung PA
AI199526.1 Clone IMAGE:1860754 brain 3' read
T16184.1 brain 3' read
R49294.1 Clone IMAGE:36841 brain 3' read
R43720.1 Clone IMAGE:32596 brain 3' read
T09405.1 Clone HIBBT88 brain 5' read
AI804979.1 Clone IMAGE:2268143 uterus 3' read
AI822046.1 Clone IMAGE:298734 lung 5' read P
AI822097.1 Clone IMAGE:298734 lung 3' read PA
AI864586.1 Clone IMAGE:2428743 brain 3' read
AI933229.1 Clone IMAGE:2466498 brain 3' read
Z42045.1 Clone c-06g11 brain
BX328354.2 Clone CS0DL010YD08 uncharacterized tissue 5' read P
BX363840.2 Clone CS0DL006YI05 uncharacterized tissue 5' read P
BX385392.2 Clone CS0DL010YD08 uncharacterized tissue 5' read P
BX374295.2 Clone CS0DL010YD08 uncharacterized tissue 3' read A
AL119244.1 Clone DKFZp761G1313 brain 5' read P
Z44560.1 Clone c-24b06 brain
F03627.1 Clone c-24b06 brain 3' read
CF123368.1 Clone IMAGE:30572717 prostate 5' read
Z44746.1 Clone c-28b12 brain
Z41710.1 Clone c-28b12 brain 3' read
AW054731.1 Clone IMAGE:2566810 brain 3' read PA
CF453906.1 Clone IMAGE:30513516 nerve 5' read
AW408380.1 Clone IMAGE:3056668 lymph node 5' read P
AW574849.1 Clone IMAGE:3056668 lymph node 3' read A
T16221.1 brain 3' read
AW955210.1 uncharacterized tissue
AW956942.1 uncharacterized tissue
CN336466.1 embryonic tissue 5' read P
CN336467.1 embryonic tissue 5' read P
CN336468.1 embryonic tissue 5' read P
H09735.1 Clone IMAGE:45675 brain 3' read A
H10493.1 Clone IMAGE:45675 brain 5' read
H14944.1 Clone IMAGE:48328 brain 5' read
H14945.1 Clone IMAGE:48328 brain 3' read A
BE253556.1 Clone IMAGE:3344704 eye 5' read
BE254304.1 Clone IMAGE:3355638 eye 5' read
CV030244.1 mixed 5' read P
H22790.1 Clone IMAGE:52253 brain 5' read
H22998.1 Clone IMAGE:52280 brain 3' read
BP193800.1 Clone ADB03420 brain 5' read P
BP198822.1 Clone ADR03920 brain 5' read P
BP202564.1 Clone AMR08794 brain 5' read P
BP251080.1 Clone HPR06229 brain 5' read P
BP211882.1 Clone CBR02049 brain 5' read P
BP213231.1 Clone CBR06181 brain 5' read P
BP348603.1 Clone SZR01050 brain 5' read P
BP348926.1 Clone SZR02430 brain 5' read P
H28148.1 Clone IMAGE:183954 brain 3' read
BE514216.1 Clone IMAGE:3634249 lymph 5' read
H30617.1 Clone IMAGE:183954 brain 5' read
H43777.1 Clone IMAGE:184224 brain 5' read
CX782867.1 Clone IMAGE:7477437 embryonic tissue 3' read A
CX782946.1 Clone IMAGE:7477437 embryonic tissue 5' read
R84534.1 Clone IMAGE:180110 brain 5' read
BE792634.1 Clone IMAGE:3939059 lung 5' read
R87357.1 Clone IMAGE:165992 brain 5' read
DR003530.1 Clone TC100472 brain 5' read P
BF128697.1 Clone IMAGE:4054119 tonsil 5' read
H51584.1 Clone IMAGE:179905 brain 3' read
DA135509.1 Clone BRALZ2008476 brain 5' read
DA327680.1 Clone BRHIP3023736 brain 5' read P
T31052.1 brain 5' read
T31066.1 brain 5' read
T33577.1 brain 3' read
BF953173.1 brain P
BF955108.1 brain
BF955753.1 brain P
BF961264.1 brain
AL533042.3 Clone CS0DN005YF14 brain 3' read
AL533043.3 Clone CS0DN005YF14 brain 5' read
EC544949.1 prostate
N47314.1 Clone IMAGE:280511 brain 5' read
N47315.1 Clone IMAGE:280511 brain 3' read
N55224.1 Clone IMAGE:284038 brain 5' read
N75285.1 Clone IMAGE:298734 lung 3' read A
DC312410.1 Clone BRALZ2014485 brain 5' read P
DC316752.1 Clone BRAMY2046460 brain 5' read P
DC306867.1 Clone BRACE3005551 brain 5' read P
DC314914.1 Clone BRAMY2024573 brain 5' read P
DC425832.1 Clone BRAMY2024573 brain 3' read
DC332135.1 Clone BRHIP2027899 brain 5' read P
BI489567.1 Clone IMAGE:5173129 mixed 5' read P
EL953896.1 eye 5' read
BI754375.1 Clone IMAGE:5197662 brain 5' read
BI755099.1 Clone IMAGE:5194173 brain 5' read
BI755982.1 Clone IMAGE:5200707 brain 5' read
BI762520.1 Clone IMAGE:5188570 mixed 5' read
W04660.1 Clone IMAGE:298734 lung 5' read
BM544428.1 Clone IMAGE:5728165 brain 5' read
BM544781.1 Clone IMAGE:5727535 brain 5' read
BM548244.1 Clone IMAGE:5733947 brain 5' read P
BM665564.1 Clone UI-E-CL1-afb-h-24-0-UI eye 3' read A
BM665764.1 Clone UI-E-CK1-afn-f-24-0-UI eye 3' read PA
BM668658.1 Clone UI-E-CK1-afm-l-01-0-UI eye 3' read A
BM672239.1 Clone UI-E-CL1-aek-f-08-0-UI eye 3' read A
BM681486.1 Clone UI-E-EJ0-aij-e-15-0-UI eye 3' read A
BM682793.1 Clone UI-E-EJ1-ajf-i-14-0-UI eye 3' read A
BM693384.1 Clone UI-E-CK1-afm-l-01-0-UI eye 5' read A
BM700891.1 Clone UI-E-CL1-aek-f-08-0-UI eye 5' read
BM701771.1 Clone UI-E-CQ1-aew-p-18-0-UI brain 5' read
BM703989.1 Clone UI-E-CK1-afi-e-12-0-UI eye 5' read
BM719467.1 Clone UI-E-EJ1-ajf-i-14-0-UI eye 5' read A
BM724700.1 Clone UI-E-EJ0-ais-c-18-0-UI eye 5' read
BM805732.1 Clone IMAGE:5730559 brain 5' read
BM809027.1 Clone IMAGE:5734476 brain 5' read
BQ338084.1 brain
BF918411.1 brain P
BF918416.1 brain
BQ887764.1 Clone IMAGE:6315810 eye 5' read
BU193429.1 Clone IMAGE:6144222 eye 5' read P
BU729889.1 Clone UI-E-CK1-afi-e-12-0-UI eye 3' read A
AA323180.1 brain 5' read
AA323391.1 brain 5' read P
AA324499.1 brain 5' read
AA350673.1 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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