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UniSTS:23481 Links
WI-15826
Homo sapiens chromosome X, loci CXorf40A and CXorf40B
Pan troglodytes chromosome X, locus LOC465898

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:CAATCCAGAAACTAGCAGGACC
Reverse primer:CTTGTGTGATGCCTCCTTAGG
PCR product size:126 (bp), Homo sapiens
GenBank Accession:F09153 G23200

   Homo sapiens
Name: WI-15826
Also known as: EST129737
Polymorphism info:  

Cross References Help
Gene GeneID:541578
 Symbol:CXorf40B
 Description:chromosome X open reading frame 40B
 Position:Xq28
Gene GeneID:91966
 Symbol:CXorf40A
 Description:chromosome X open reading frame 40A
 Position:Xq28
UniGeneHs.545950 Chromosome X open reading frame 40B
 Hs.654738 Chromosome X open reading frame 40A

Mapping InformationHelp
WI-15826 Sequence Map: Chr X|HuRef Map Viewer
  Position: 137582107-137582232 (bp)
 
WI-15826 Sequence Map: Chr X Map Viewer
  Position: 148436611-148436736 (bp)
 
WI-15826 Sequence Map: Chr X Map Viewer
  Position: 148851097-148851222 (bp)
 
WI-15826 Sequence Map: Chr X|Celera Map Viewer
  Position: 148977423-148977548 (bp)
 
WI-15826 NCBI RH Map: Chr X Map Viewer
  Position: 733.4 (cR)
  Lod score: 1.14
 
WI-15826 Whitehead-RH Map: Chr X Map Viewer
  Position: 314.8 (cR3000)
  Lod score: P0.00
 
WI-15826 GeneMap99-GB4 Map: Chr X Map Viewer
  Position: 347.01 (cR3000)
  Lod score: 1.08
  Reference Interval: DXS1193-qTEL

Electronic PCR results Help
RefSeq mRNA (2)
NM_178124.3 1217 .. 1342 (126 bp)  
NM_001013845.1 1191 .. 1316 (126 bp)  
 
mRNA (5 of 7)[Show All Hits]
L43578.1 919 .. 1044 (126 bp)  
U66042.1 1178 .. 1303 (126 bp)  
BC009523.1 797 .. 922 (126 bp)  
AK055235.1 2174 .. 2299 (126 bp)  
AY074889.1 1217 .. 1342 (126 bp)  
 
Genomic (5 of 13)[Show All Hits]
G23039.1 26 .. 149 (124 bp)  
G23200.1 24 .. 149 (126 bp)  
U66083.1 37061 .. 37186 (126 bp)  
AF011889.1 313901 .. 314026 (126 bp)  
CH003470.1 143760148 .. 143760273 (126 bp)  
 
ESTs (5 of 116)[Show All Hits]
T17036.1 24 .. 149 (126 bp)  
F09153.1 24 .. 149 (126 bp)  
T87306.1 26 .. 149 (124 bp)  
H15095.1 32 .. 157 (126 bp)  
L43576.1 451 .. 576 (126 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01200572.1 1699 .. 1824 (126 bp)  
AADC01148787.1 1119010 .. 1119135 (126 bp)  
AADB02037402.1 26330 .. 26455 (126 bp)  
ABBA01185262.1 557 .. 682 (126 bp)  
ABBA01049647.1 2030 .. 2155 (126 bp)  
 

   Pan troglodytes
Name: WI-15826
Polymorphism info:  

Cross References Help
Gene GeneID:465898
 Symbol:LOC465898
 Description:hypothetical LOC465898
 Position: 

Mapping InformationHelp
WI-15826 Sequence Map: Chr X Map Viewer
  Position: 149028910-149029035 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_521298.2 1015 .. 1140 (126 bp)  
XM_001140462.1 827 .. 952 (126 bp)  
XM_001140538.1 1264 .. 1389 (126 bp)  
 
Genomic (3)
CT025638.1 184742 .. 184867 (126 bp)  
CM000336.1 149028910 .. 149029035 (126 bp)  
CU695245.1 49787 .. 49912 (126 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01096893.1 7909 .. 8034 (126 bp)  
AACZ02224823.1 8111 .. 8236 (126 bp)  
 

 

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