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UniSTS:70184 Links
SHGC-24292
Homo sapiens chromosome 13, locus LNX2
Macaca mulatta chromosome 17, locus LOC710660
Pan troglodytes chromosome 13, locus LNX2

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TGACTTTTATTTCCATCCTGAATG
Reverse primer:TGGTTTGTTCTGTGCCTTCA
PCR product size:92 (bp), Homo sapiens
GenBank Accession:Z38767

   Homo sapiens
Name: SHGC-24292
Also known as:
Polymorphism info:  

Cross References Help
Gene GeneID:222484
 Symbol:LNX2
 Description:ligand of numb-protein X 2
 Position:13q12.2
UniGeneHs.132359 Ligand of numb-protein X 2
 Hs.597424 Transcribed locus

Mapping InformationHelp
SHGC-24292 Sequence Map: Chr 13 Map Viewer
  Position: 27018062-27018153 (bp)
 
SHGC-24292 Sequence Map: Chr 13|HuRef Map Viewer
  Position: 8941254-8941345 (bp)
 
SHGC-24292 Sequence Map: Chr 13|Celera Map Viewer
  Position: 9188688-9188779 (bp)
 
SHGC-24292 NCBI RH Map: Chr 13 Map Viewer
  Position: 202.6 (cR)
  Lod score: 1.12
 
SHGC-24292 TNG Map: Chr 13 Map Viewer
  Position: 4788 (cR50000)
  Lod score: 5.1
  Reference Interval: 10
 
SHGC-24292 Stanford-G3 Map: Chr 13 Map Viewer
  Position: 341 (cR10000)
  Lod score: F
  Reference Interval: 1
 
SHGC-24292 GeneMap99-G3 Map: Chr 13 Map Viewer
  Position: 337 (cR10000)
  Lod score: F
  Reference Interval: D13S1244-D13S260

Electronic PCR results Help
RefSeq mRNA (1)
NM_153371.3 4701 .. 4792 (92 bp)  
 
mRNA (2)
AK022995.1 2474 .. 2565 (92 bp)  
BC036755.2 4530 .. 4621 (92 bp)  
 
Genomic (5 of 7)[Show All Hits]
AL138699.10 8131 .. 8222 (92 bp)  
CH003460.1 8731073 .. 8731164 (92 bp)  
CH003508.1 9085939 .. 9086030 (92 bp)  
CH471075.1 8923912 .. 8924003 (92 bp)  
CM000264.1 9188688 .. 9188779 (92 bp)  
 
ESTs (5 of 20)[Show All Hits]
Z38767.1 11 .. 102 (92 bp)  
N91273.1 11 .. 102 (92 bp)  
AA630753.1 10 .. 101 (92 bp)  
AA744901.1 10 .. 101 (92 bp)  
AA988366.1 18 .. 109 (92 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01130245.1 10861 .. 10952 (92 bp)  
AADC01111844.1 25102 .. 25193 (92 bp)  
AADB02015942.1 1072934 .. 1073025 (92 bp)  
ABBA01035744.1 37274 .. 37365 (92 bp)  
 

   Macaca mulatta
Name: SHGC-24292
Polymorphism info:  

Cross References Help
Gene GeneID:710660
 Symbol:LOC710660
 Description:similar to PDZ domain containing ring finger 1
 Position: 
UniGeneMmu.1202 Similar to PDZ domain containing ring finger 1

Mapping InformationHelp
SHGC-24292 Sequence Map: Chr 17 Map Viewer
  Position: 7247057-7247148 (bp)

   Pan troglodytes
Name: SHGC-24292
Polymorphism info:  

Cross References Help
Gene GeneID:467244
 Symbol:LNX2
 Description:ligand of numb-protein X 2
 Position: 

Mapping InformationHelp
SHGC-24292 Sequence Map: Chr 13 Map Viewer
  Position: 27199214-27199305 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_522642.2 4577 .. 4668 (92 bp)  
 
Genomic (1)
CM000327.1 27199214 .. 27199305 (92 bp)  
 
Whole Genome Shotgun sequences (3)
AADA01197711.1 37314 .. 37405 (92 bp)  
AADA01158898.1 352 .. 443 (92 bp)  
AACZ02141646.1 12216 .. 12307 (92 bp)  
 

 

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