BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TDE1218
(474 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42526727|ref|NP_971825.1| flagellum-specific ATP synthas... 903 0.0
gi|2105151|gb|AAB57902.1| FliI [Treponema denticola] 840 0.0
gi|15639393|ref|NP_218842.1| flagellum-specific ATP synthas... 511 e-143
gi|124521665|ref|ZP_01696539.1| flagellar protein export AT... 478 e-133
gi|126653746|ref|ZP_01725664.1| flagellum-specific ATP synt... 474 e-132
gi|23099013|ref|NP_692479.1| flagellum-specific ATP synthas... 474 e-132
gi|52080226|ref|YP_079017.1| flagellum-specific ATP synthas... 473 e-131
gi|149182506|ref|ZP_01860979.1| flagellum-specific ATP synt... 472 e-131
gi|16078687|ref|NP_389506.1| flagellum-specific ATP synthas... 467 e-130
gi|56419757|ref|YP_147075.1| flagellum-specific ATP synthas... 459 e-127
gi|138894743|ref|YP_001125196.1| Flagellar-specific ATP syn... 457 e-127
gi|89098641|ref|ZP_01171523.1| flagellum-specific ATP synth... 457 e-127
gi|154686040|ref|YP_001421201.1| FliI [Bacillus amyloliquef... 453 e-125
gi|76796419|ref|ZP_00778781.1| ATPase FliI/YscN [Thermoanae... 452 e-125
gi|68055857|ref|ZP_00539997.1| ATPase FliI/YscN [Exiguobact... 448 e-124
gi|15615018|ref|NP_243321.1| flagellum-specific ATP synthas... 448 e-124
gi|134300244|ref|YP_001113740.1| flagellar protein export A... 448 e-124
gi|15642991|ref|NP_228033.1| flagellum-specific ATP synthas... 445 e-123
gi|146296283|ref|YP_001180054.1| flagellar protein export A... 444 e-123
gi|150390484|ref|YP_001320533.1| flagellar protein export A... 444 e-123
gi|20807886|ref|NP_623057.1| Flagellar biosynthesis/type II... 444 e-123
gi|106894641|ref|ZP_01361758.1| ATPase FliI/YscN [Clostridi... 441 e-122
gi|148269842|ref|YP_001244302.1| flagellar protein export A... 439 e-121
gi|125972989|ref|YP_001036899.1| flagellar protein export A... 439 e-121
gi|28211328|ref|NP_782272.1| flagellum-specific ATP synthas... 438 e-121
gi|147678420|ref|YP_001212635.1| flagellar biosynthesis/typ... 438 e-121
gi|109646047|ref|ZP_01369967.1| ATPase, FliI/YscN family [D... 436 e-120
gi|83589626|ref|YP_429635.1| ATPase FliI/YscN [Moorella the... 436 e-120
gi|89210109|ref|ZP_01188501.1| ATPase FliI/YscN [Halothermo... 434 e-120
gi|89895732|ref|YP_519219.1| hypothetical protein DSY2986 [... 434 e-120
gi|150019077|ref|YP_001311331.1| flagellar protein export A... 434 e-120
gi|56964031|ref|YP_175762.1| flagellum-specific ATP synthas... 433 e-119
gi|114566387|ref|YP_753541.1| Sodium-transporting two-secto... 432 e-119
gi|118442915|ref|YP_877978.1| flagellum-specific ATP syntha... 432 e-119
gi|121533760|ref|ZP_01665587.1| flagellar protein export AT... 432 e-119
gi|153938471|ref|YP_001391960.1| flagellar protein export A... 432 e-119
gi|15895428|ref|NP_348777.1| Flagellar-Type ATPase [Clostri... 431 e-119
gi|42524760|ref|NP_970140.1| flagellum-specific ATP synthas... 430 e-119
gi|150021149|ref|YP_001306503.1| flagellar protein export A... 429 e-118
gi|148380617|ref|YP_001255158.1| flagellum-specific ATP syn... 429 e-118
gi|153953781|ref|YP_001394546.1| FliI [Clostridium kluyveri... 428 e-118
gi|153934199|ref|YP_001384903.1| flagellar protein export A... 428 e-118
gi|91200226|emb|CAJ73270.1| strongly similar to flagellar A... 426 e-117
gi|77918793|ref|YP_356608.1| flagellum-specific ATP synthas... 425 e-117
gi|126697822|ref|YP_001086719.1| flagellum-specific ATP syn... 425 e-117
gi|145956182|ref|ZP_01805179.1| hypothetical protein CdifQ_... 424 e-117
gi|67941452|ref|ZP_00533589.1| ATPase FliI/YscN [Chlorobium... 423 e-116
gi|118726781|ref|ZP_01575399.1| flagellar protein export AT... 422 e-116
gi|154249443|ref|YP_001410268.1| flagellar protein export A... 421 e-116
gi|106885112|ref|ZP_01352477.1| ATPase FliI/YscN [Clostridi... 421 e-116
gi|39995521|ref|NP_951472.1| flagellum-specific ATP synthas... 419 e-115
gi|118581829|ref|YP_903079.1| flagellar protein export ATPa... 415 e-114
gi|153892990|ref|ZP_02013808.1| flagellar protein export AT... 414 e-114
gi|78224301|ref|YP_386048.1| ATPase FliI/YscN [Geobacter me... 413 e-113
gi|51894136|ref|YP_076827.1| flagellar-specific ATP synthas... 412 e-113
gi|110599282|ref|ZP_01387522.1| ATPase FliI/YscN [Geobacter... 412 e-113
gi|117923588|ref|YP_864205.1| flagellar protein export ATPa... 411 e-113
gi|116619484|ref|YP_821640.1| ATPase, FliI/YscN family [Sol... 409 e-112
gi|145617500|ref|ZP_01773565.1| flagellar protein export AT... 409 e-112
gi|111115113|ref|YP_709731.1| flagellum-specific ATP syntha... 408 e-112
gi|148266220|ref|YP_001232926.1| flagellar protein export A... 407 e-112
gi|51598548|ref|YP_072736.1| flagellum-specific ATP synthas... 405 e-111
gi|94986982|ref|YP_594915.1| Type III secretion component p... 405 e-111
gi|95929852|ref|ZP_01312593.1| ATPase FliI/YscN [Desulfurom... 404 e-111
gi|118744430|ref|ZP_01592423.1| flagellar protein export AT... 404 e-111
gi|78355397|ref|YP_386846.1| ATPase FliI/YscN [Desulfovibri... 402 e-110
gi|15594633|ref|NP_212422.1| flagellum-specific ATP synthas... 402 e-110
gi|51246511|ref|YP_066395.1| flagellum-specific ATP synthas... 401 e-110
gi|145621452|ref|ZP_01777421.1| flagellar protein export AT... 400 e-110
gi|1196321|gb|AAB51413.1| flagellar export apparatus [Borre... 400 e-110
gi|94264096|ref|ZP_01287895.1| ATPase FliI/YscN [delta prot... 400 e-109
gi|46562141|ref|YP_009159.1| type III secretion system ATPa... 399 e-109
gi|149178726|ref|ZP_01857309.1| flagellum-specific ATP synt... 397 e-109
gi|108762697|ref|YP_630662.1| ATPase, FliI/YscN family [Myx... 396 e-108
gi|85858820|ref|YP_461022.1| flagellum-specific ATP synthas... 395 e-108
gi|46578726|ref|YP_009534.1| flagellum-specific ATP synthas... 394 e-107
gi|78043388|ref|YP_359843.1| flagellum-specific ATP synthas... 392 e-107
gi|33593244|ref|NP_880888.1| type III secretion system ATPa... 390 e-106
gi|33600613|ref|NP_888173.1| type III secretion system ATPa... 390 e-106
gi|117928052|ref|YP_872603.1| flagellar protein export ATPa... 390 e-106
gi|144900259|emb|CAM77123.1| flagellum-specific ATP synthas... 389 e-106
gi|87307395|ref|ZP_01089540.1| flagellum-specific ATP synth... 389 e-106
gi|37527629|ref|NP_930973.1| type III secretion system ATPa... 388 e-106
gi|33596839|ref|NP_884482.1| type III secretion system ATPa... 388 e-106
gi|83647778|ref|YP_436213.1| putative Yops secretion ATP sy... 388 e-106
gi|94987296|ref|YP_595229.1| Flagellar biosynthesis/type II... 388 e-106
gi|54124956|gb|AAV30224.1| AscN [Aeromonas hydrophila] 387 e-106
gi|46447031|ref|YP_008396.1| type III secretion system ATPa... 387 e-106
gi|2935537|gb|AAC38612.1| BscN [Bordetella bronchiseptica] 385 e-105
gi|15834665|ref|NP_296424.1| type III secretion system ATPa... 385 e-105
gi|15618617|ref|NP_224903.1| type III secretion system ATPa... 384 e-105
gi|46398256|gb|AAS91810.1| AscN [Aeromonas hydrophila] 384 e-105
gi|153832446|ref|ZP_01985113.1| type III secretion apparatu... 383 e-104
gi|145301459|ref|YP_001144298.1| AscN protein [Aeromonas sa... 383 e-104
gi|61219459|gb|AAX40636.1| HrpB6 [Xanthomonas oryzae pv. or... 383 e-104
gi|38674625|gb|AAR26330.1| AscN [Aeromonas hydrophila] 382 e-104
gi|156974019|ref|YP_001444926.1| hypothetical protein VIBHA... 382 e-104
gi|51860705|gb|AAU11472.1| putative TTSS ATPase N [Photobac... 382 e-104
gi|29839803|ref|NP_828909.1| type III secretion system ATPa... 382 e-104
gi|15605402|ref|NP_220188.1| type III secretion system ATPa... 381 e-104
gi|76789409|ref|YP_328495.1| type III secretion system ATPa... 381 e-104
gi|89898777|ref|YP_515887.1| type III secretory flagellar b... 380 e-104
gi|27550061|gb|AAO18044.1| LscN [Photorhabdus luminescens] 380 e-104
gi|116049647|ref|YP_791548.1| ATP synthase in type III secr... 380 e-103
gi|84321661|ref|ZP_00970016.1| COG1157: Flagellar biosynthe... 380 e-103
gi|15596894|ref|NP_250388.1| type III secretion system ATPa... 379 e-103
gi|62184683|ref|YP_219468.1| type III secretion system ATPa... 379 e-103
gi|107101129|ref|ZP_01365047.1| hypothetical protein PaerPA... 379 e-103
gi|28898442|ref|NP_798047.1| type III secretion system ATPa... 379 e-103
gi|126193420|gb|EAZ57483.1| ATP synthase in type III secret... 379 e-103
gi|75674724|ref|YP_317145.1| flagellum-specific ATP synthas... 379 e-103
gi|84328018|ref|ZP_00976029.1| COG1157: Flagellar biosynthe... 379 e-103
gi|115377823|ref|ZP_01465011.1| type III secretion apparatu... 379 e-103
gi|153836244|ref|ZP_01988911.1| type III secretion apparatu... 378 e-103
gi|21241185|ref|NP_640767.1| type III secretion system ATPa... 378 e-103
gi|30524894|gb|AAP34339.1|AF499777_7 HrcN [Xanthomonas axon... 378 e-103
gi|85713633|ref|ZP_01044623.1| flagellum-specific ATP synth... 378 e-103
gi|92118831|ref|YP_578560.1| ATPase FliI/YscN [Nitrobacter ... 377 e-103
gi|58579714|ref|YP_198730.1| type III secretion system ATPa... 377 e-103
gi|89094452|ref|ZP_01167392.1| flagellum-specific ATP synth... 377 e-102
gi|83309727|ref|YP_419991.1| Flagellar biosynthesis/type II... 377 e-102
gi|83816428|ref|YP_446712.1| flagellar protein export ATPas... 377 e-102
gi|78045988|ref|YP_362163.1| type III secretion system ATPa... 376 e-102
gi|120609166|ref|YP_968844.1| type III secretion apparatus ... 376 e-102
gi|146338576|ref|YP_001203624.1| flagellum-specific ATP syn... 376 e-102
gi|24251287|gb|AAN46406.1| HrpB6 [Xanthomonas oryzae pv. or... 376 e-102
gi|148257762|ref|YP_001242347.1| flagellum-specific ATP syn... 375 e-102
gi|46201676|ref|ZP_00054580.2| COG1157: Flagellar biosynthe... 375 e-102
gi|91224474|ref|ZP_01259736.1| type III secretion system AT... 375 e-102
gi|116186970|ref|ZP_01476861.1| hypothetical protein VEx2w_... 375 e-102
gi|94968677|ref|YP_590725.1| ATPase FliI/YscN [Acidobacteri... 375 e-102
gi|17549091|ref|NP_522431.1| type III secretion system ATPa... 375 e-102
gi|89111182|dbj|BAE80271.1| HrcN [Acidovorax avenae subsp. ... 375 e-102
gi|89111149|dbj|BAE80239.1| HrcN [Acidovorax avenae subsp. ... 375 e-102
gi|152965619|ref|YP_001361403.1| ATPase, FliI/YscN family [... 375 e-102
gi|91978136|ref|YP_570795.1| ATPase FliI/YscN [Rhodopseudom... 374 e-102
gi|145597142|ref|YP_001154606.1| Yops secretion ATP synthas... 374 e-102
gi|83646778|ref|YP_435213.1| flagellum-specific ATP synthas... 374 e-102
gi|119899009|ref|YP_934222.1| ATP synthase [Azoarcus sp. BH... 374 e-102
gi|16082728|ref|NP_395174.1| type III secretion system ATPa... 373 e-101
gi|10955560|ref|NP_052401.1| ATPase YscN [Yersinia enteroco... 373 e-101
gi|152986739|ref|YP_001349621.1| flagellar protein export A... 373 e-101
gi|21230693|ref|NP_636610.1| type III secretion system ATPa... 372 e-101
gi|32477553|ref|NP_870547.1| flagellum-specific ATP synthas... 372 e-101
gi|116327838|ref|YP_797558.1| Endoflagellar biosynthesis/ty... 372 e-101
gi|24215292|ref|NP_712773.1| flagellum-specific ATP synthas... 372 e-101
gi|27377312|ref|NP_768841.1| flagellum-specific ATP synthas... 371 e-101
gi|119856733|ref|ZP_01638165.1| Flagellar protein export AT... 371 e-101
gi|388096|gb|AAA20119.1| yscN >gi|392946|gb|AAA73398.1| YscN 370 e-101
gi|70729033|ref|YP_258767.1| flagellum-specific ATP synthas... 370 e-100
gi|83747851|ref|ZP_00944884.1| HrcN [Ralstonia solanacearum... 370 e-100
gi|77457766|ref|YP_347271.1| flagellum-specific ATP synthas... 370 e-100
gi|83646016|ref|YP_434451.1| Flagellar biosynthesis/type II... 370 e-100
gi|124265761|ref|YP_001019765.1| flagellar biosynthesis ATP... 370 e-100
gi|148359301|ref|YP_001250508.1| flagellum-specific ATP syn... 369 e-100
gi|52841984|ref|YP_095783.1| nucleotide binding protein Fli... 369 e-100
gi|6066711|emb|CAB58257.1| HrpE protein [Ralstonia solanace... 369 e-100
gi|54307262|ref|YP_128282.1| Putative FliI, flagellum-speci... 368 e-100
gi|104782818|ref|YP_609316.1| flagellum-specific ATP syntha... 367 1e-99
gi|77979919|ref|ZP_00835335.1| COG1157: Flagellar biosynthe... 366 1e-99
gi|126665012|ref|ZP_01735995.1| flagellum-specific ATP synt... 366 2e-99
gi|71906409|ref|YP_283996.1| ATPase FliI/YscN [Dechloromona... 365 3e-99
gi|86751019|ref|YP_487515.1| ATPase FliI/YscN [Rhodopseudom... 365 3e-99
gi|77359744|ref|YP_339319.1| flagellum-specific ATP synthas... 365 3e-99
gi|54297670|ref|YP_124039.1| flagellum-specific ATP synthas... 365 3e-99
gi|154252622|ref|YP_001413446.1| flagellar protein export A... 365 3e-99
gi|39934703|ref|NP_946979.1| flagellum-specific ATP synthas... 364 5e-99
gi|54294644|ref|YP_127059.1| flagellum-specific ATP synthas... 364 6e-99
gi|88800457|ref|ZP_01116021.1| flagellum-specific ATP synth... 363 9e-99
gi|56413614|ref|YP_150689.1| type III secretion system ATPa... 363 1e-98
gi|90425705|ref|YP_534075.1| ATPase FliI/YscN [Rhodopseudom... 363 1e-98
gi|34498589|ref|NP_902804.1| flagellum-specific ATP synthas... 363 1e-98
gi|77959500|ref|ZP_00823519.1| COG1157: Flagellar biosynthe... 363 1e-98
gi|77634796|ref|ZP_00796890.1| COG1157: Flagellar biosynthe... 363 1e-98
gi|119469988|ref|ZP_01612793.1| flagellum-specific ATP synt... 363 1e-98
gi|62180006|ref|YP_216423.1| type III secretion system ATPa... 363 1e-98
gi|16764765|ref|NP_460380.1| type III secretion system ATPa... 363 2e-98
gi|15596301|ref|NP_249795.1| flagellum-specific ATP synthas... 363 2e-98
gi|45440276|ref|NP_991815.1| flagellum-specific ATP synthas... 363 2e-98
gi|115422793|emb|CAJ49321.1| flagellum-specific ATP synthas... 363 2e-98
gi|16120605|ref|NP_403918.1| flagellum-specific ATP synthas... 363 2e-98
gi|37525868|ref|NP_929212.1| flagellum-specific ATP synthas... 363 2e-98
gi|66046683|ref|YP_236524.1| flagellum-specific ATP synthas... 363 2e-98
gi|90406816|ref|ZP_01215008.1| flagellum-specific ATP synth... 363 2e-98
gi|146307844|ref|YP_001188309.1| flagellar protein export A... 363 2e-98
gi|33592499|ref|NP_880143.1| flagellum-specific ATP synthas... 362 2e-98
gi|119715003|ref|YP_921968.1| ATPase, FliI/YscN family [Noc... 362 2e-98
gi|153948731|ref|YP_001402772.1| type III secretion apparat... 362 3e-98
gi|88704284|ref|ZP_01101998.1| flagellum-specific ATP synth... 362 3e-98
gi|28869165|ref|NP_791784.1| flagellum-specific ATP synthas... 362 3e-98
gi|16760496|ref|NP_456113.1| type III secretion system ATPa... 362 3e-98
gi|115526263|ref|YP_783174.1| flagellar protein export ATPa... 362 3e-98
gi|120554911|ref|YP_959262.1| flagellar protein export ATPa... 362 4e-98
gi|74101650|gb|AAZ99740.1| FliIL [Aeromonas hydrophila] 362 4e-98
gi|33601562|ref|NP_889122.1| flagellum-specific ATP synthas... 362 4e-98
gi|33596155|ref|NP_883798.1| flagellum-specific ATP synthas... 362 4e-98
gi|83647858|ref|YP_436293.1| flagellum-specific ATP synthas... 361 5e-98
gi|145298349|ref|YP_001141190.1| Polar flagellum-specific A... 361 6e-98
gi|88813204|ref|ZP_01128444.1| Flagellar biosynthesis/type ... 361 6e-98
gi|83591865|ref|YP_425617.1| ATPase FliI/YscN [Rhodospirill... 361 7e-98
gi|77165819|ref|YP_344344.1| Flagellar biosynthesis/type II... 360 9e-98
gi|149908767|ref|ZP_01897428.1| Putative FliI, flagellum-sp... 360 1e-97
gi|71736661|ref|YP_275538.1| flagellum-specific ATP synthas... 360 1e-97
gi|58040126|ref|YP_192090.1| flagellum-specific ATP synthas... 360 1e-97
gi|149377885|ref|ZP_01895614.1| flagellum-specific ATP synt... 360 2e-97
gi|55977138|gb|AAV68359.1| FliI [Herminiimonas arsenicoxydans] 359 2e-97
gi|149928159|ref|ZP_01916405.1| flagellar biosynthesis/type... 359 2e-97
gi|88858105|ref|ZP_01132747.1| flagellum-specific ATP synth... 359 2e-97
gi|77957924|ref|ZP_00821967.1| COG1157: Flagellar biosynthe... 359 2e-97
gi|82702477|ref|YP_412043.1| ATPase FliI/YscN [Nitrosospira... 359 3e-97
gi|77978145|ref|ZP_00833578.1| COG1157: Flagellar biosynthe... 359 3e-97
gi|146282926|ref|YP_001173079.1| flagellum-specific ATP syn... 359 3e-97
gi|153005077|ref|YP_001379402.1| ATPase, FliI/YscN family [... 358 3e-97
gi|67154575|ref|ZP_00416320.1| ATPase FliI/YscN [Azotobacte... 358 4e-97
gi|16760916|ref|NP_456533.1| flagellum-specific ATP synthas... 358 4e-97
gi|118592622|ref|ZP_01550012.1| type III secretion system A... 358 4e-97
gi|77961116|ref|ZP_00824962.1| COG1157: Flagellar biosynthe... 358 6e-97
gi|123442767|ref|YP_001006744.1| flagellum-specific ATP syn... 357 7e-97
gi|118708579|ref|ZP_01561163.1| type III secretion apparatu... 357 8e-97
gi|16765310|ref|NP_460925.1| flagellum-specific ATP synthas... 357 9e-97
gi|59712456|ref|YP_205232.1| flagellum-specific ATP synthas... 357 1e-96
gi|83859268|ref|ZP_00952789.1| flagellum-specific ATP synth... 356 1e-96
gi|74055037|gb|AAZ95842.1| FliI [Aeromonas hydrophila] 356 2e-96
gi|85711039|ref|ZP_01042099.1| flagellum-specific ATP synth... 356 2e-96
gi|117620954|ref|YP_855907.1| flagellar protein export ATPa... 356 2e-96
gi|56413115|ref|YP_150190.1| flagellum-specific ATP synthas... 355 3e-96
gi|84388114|ref|ZP_00991010.1| flagellum-specific ATP synth... 355 3e-96
gi|91776327|ref|YP_546083.1| ATPase FliI/YscN [Methylobacil... 355 3e-96
gi|157082470|gb|ABV12148.1| hypothetical protein CKO_01002 ... 355 3e-96
gi|114777408|ref|ZP_01452405.1| flagellum-specific ATP synt... 355 4e-96
gi|50120656|ref|YP_049823.1| flagellum-specific ATP synthas... 355 4e-96
gi|122919955|pdb|2DPY|A Chain A, Crystal Structure Of The F... 355 4e-96
gi|30250026|ref|NP_842096.1| Flagellar ATP synthase [Nitros... 355 4e-96
gi|74317621|ref|YP_315361.1| flagellar biosynthesis/type II... 355 4e-96
gi|114319873|ref|YP_741556.1| flagellar protein export ATPa... 355 5e-96
gi|149908454|ref|ZP_01897117.1| flagellum-specific ATP synt... 355 5e-96
gi|77975709|ref|ZP_00831243.1| COG1157: Flagellar biosynthe... 355 5e-96
gi|126357144|ref|ZP_01714147.1| flagellar protein export AT... 355 5e-96
gi|152997448|ref|YP_001342283.1| flagellar protein export A... 354 6e-96
gi|26991055|ref|NP_746480.1| flagellum-specific ATP synthas... 354 6e-96
gi|21231371|ref|NP_637288.1| flagellar protein [Xanthomonas... 354 7e-96
gi|119034703|gb|ABL59998.1| SctN [Lysobacter enzymogenes] 354 8e-96
gi|100235049|ref|ZP_01335855.1| hypothetical protein Bpse4_... 354 9e-96
gi|1146265|gb|AAB04681.1| flagellar export protein 354 9e-96
gi|89075516|ref|ZP_01161927.1| flagellum-specific ATP synth... 354 9e-96
gi|58582227|ref|YP_201243.1| flagellar protein [Xanthomonas... 354 9e-96
gi|86146133|ref|ZP_01064459.1| flagellum-specific ATP synth... 353 1e-95
gi|126442369|ref|YP_001062985.1| type III secretion apparat... 353 1e-95
gi|148546740|ref|YP_001266842.1| flagellar protein export A... 353 1e-95
gi|83717873|ref|YP_438941.1| type III secretion cytoplasmic... 353 1e-95
gi|146312178|ref|YP_001177252.1| ATPase, FliI/YscN family [... 353 1e-95
gi|114569221|ref|YP_755901.1| flagellar protein export ATPa... 353 1e-95
gi|76818377|ref|YP_335581.1| type III secretion system ATPa... 353 1e-95
gi|53716417|ref|YP_106211.1| type III secretion system ATPa... 353 1e-95
gi|100917301|ref|ZP_01345780.1| hypothetical protein Bmal10... 353 1e-95
gi|32490806|ref|NP_871060.1| hypothetical protein WGLp057 [... 353 1e-95
gi|53722421|ref|YP_111406.1| type III secretion system ATPa... 353 1e-95
gi|126443725|ref|YP_001063282.1| type III secretion apparat... 353 1e-95
gi|134281964|ref|ZP_01768670.1| type III secretion apparatu... 353 2e-95
gi|82536630|ref|ZP_00895634.1| hypothetical protein Bpse110... 353 2e-95
gi|67640496|ref|ZP_00439300.1| COG1157: Flagellar biosynthe... 353 2e-95
gi|57505593|ref|ZP_00371520.1| flagellum-specific ATP synth... 353 2e-95
gi|126176164|ref|YP_001052313.1| ATPase, FliI/YscN family [... 352 2e-95
gi|99907914|ref|ZP_01315719.1| hypothetical protein Bpse1_0... 352 2e-95
gi|53722650|ref|YP_111635.1| type III secretion system ATPa... 352 2e-95
gi|152980499|ref|YP_001353128.1| FliI flagellum specific AT... 352 3e-95
gi|121997297|ref|YP_001002084.1| flagellar protein export A... 352 3e-95
gi|78485780|ref|YP_391705.1| ATPase FliI/YscN [Thiomicrospi... 352 3e-95
gi|145297447|ref|YP_001140288.1| lateral flagellar FliI-lik... 352 3e-95
gi|90579930|ref|ZP_01235738.1| flagellum-specific ATP synth... 351 6e-95
gi|152990375|ref|YP_001356097.1| flagellar-specific ATP syn... 351 6e-95
gi|145598585|ref|YP_001162661.1| flagellum-specific ATP syn... 351 7e-95
gi|153951633|ref|YP_001397442.1| flagellum-specific ATP syn... 351 7e-95
gi|77973321|ref|ZP_00828870.1| COG1157: Flagellar biosynthe... 351 7e-95
gi|118753941|ref|ZP_01601740.1| flagellar protein export AT... 351 8e-95
gi|119775429|ref|YP_928169.1| Sodium-transporting two-secto... 350 1e-94
gi|28899020|ref|NP_798625.1| flagellum-specific ATP synthas... 350 1e-94
gi|15791582|ref|NP_281405.1| flagellum-specific ATP synthas... 350 1e-94
gi|118032280|ref|ZP_01503730.1| ATPase, FliI/YscN family [B... 350 1e-94
gi|90411026|ref|ZP_01219040.1| flagellum-specific ATP synth... 350 2e-94
gi|94314183|ref|YP_587392.1| ATPase FliI/YscN [Ralstonia me... 350 2e-94
gi|134297243|ref|YP_001120978.1| flagellar protein export A... 350 2e-94
gi|148976416|ref|ZP_01813122.1| flagellum-specific ATP synt... 350 2e-94
gi|86151231|ref|ZP_01069446.1| flagellum-specific ATP synth... 349 2e-94
gi|18182541|gb|AAL65163.1|AF453480_5 flagellar ATPase; FliI... 349 2e-94
gi|109899349|ref|YP_662604.1| flagellar protein export ATPa... 349 2e-94
gi|107023998|ref|YP_622325.1| Flagellar protein export ATPa... 349 2e-94
gi|149188088|ref|ZP_01866383.1| flagellum-specific ATP synt... 349 2e-94
gi|91223547|ref|ZP_01258812.1| flagellum-specific ATP synth... 349 2e-94
gi|94500272|ref|ZP_01306805.1| flagellum-specific ATP synth... 349 2e-94
gi|57237200|ref|YP_178212.1| flagellum-specific ATP synthas... 349 2e-94
gi|116185995|ref|ZP_01475896.1| hypothetical protein VEx2w_... 349 3e-94
gi|84356109|ref|ZP_00980973.1| COG1157: Flagellar biosynthe... 349 3e-94
gi|118710060|ref|ZP_01562640.1| flagellar protein export AT... 349 3e-94
gi|108807199|ref|YP_651115.1| flagellum-specific ATP syntha... 349 3e-94
gi|27365283|ref|NP_760811.1| flagellum-specific ATP synthas... 348 3e-94
gi|150381867|ref|ZP_01920847.1| ATPase, FliI/YscN family [S... 348 3e-94
gi|119877626|ref|ZP_01644628.1| ATPase, FliI/YscN family [S... 348 3e-94
gi|127512300|ref|YP_001093497.1| flagellar protein export A... 348 4e-94
gi|54308119|ref|YP_129139.1| flagellum-specific ATP synthas... 348 4e-94
gi|73538925|ref|YP_299292.1| ATPase FliI/YscN [Ralstonia eu... 348 4e-94
gi|51596036|ref|YP_070227.1| flagellum-specific ATP synthas... 348 4e-94
gi|116218038|ref|ZP_01483822.1| hypothetical protein VchoR_... 348 4e-94
gi|114330755|ref|YP_746977.1| flagellar protein export ATPa... 348 4e-94
gi|22126362|ref|NP_669785.1| flagellum-specific ATP synthas... 348 5e-94
gi|34558482|ref|NP_908297.1| flagellum-specific ATP synthas... 348 5e-94
gi|78067885|ref|YP_370654.1| ATPase FliI/YscN [Burkholderia... 348 5e-94
gi|153803032|ref|ZP_01957618.1| flagellum-specific ATP synt... 348 5e-94
gi|78778279|ref|YP_394594.1| ATPase FliI/YscN [Thiomicrospi... 348 5e-94
gi|57168630|ref|ZP_00367762.1| flagellum-specific ATP synth... 348 6e-94
gi|118474658|ref|YP_892815.1| flagellar protein export ATPa... 348 6e-94
gi|119503667|ref|ZP_01625750.1| ATPase FliI/YscN [marine ga... 348 6e-94
gi|37680662|ref|NP_935271.1| flagellum-specific ATP synthas... 348 7e-94
gi|150379075|ref|ZP_01918271.1| flagellar protein export AT... 348 7e-94
gi|16122080|ref|NP_405393.1| flagellum-specific ATP synthas... 347 7e-94
gi|15642129|ref|NP_231761.1| flagellum-specific ATP synthas... 347 7e-94
gi|118072032|ref|ZP_01540224.1| flagellar protein export AT... 347 7e-94
gi|134095079|ref|YP_001100154.1| flagellum-specific ATP syn... 347 8e-94
gi|118720504|ref|ZP_01573028.1| flagellar protein export AT... 347 8e-94
gi|147675718|ref|YP_001217653.1| flagellum-specific ATP syn... 347 9e-94
gi|118700637|ref|ZP_01558705.1| flagellar protein export AT... 347 9e-94
gi|78047551|ref|YP_363726.1| flagellar biosynthesis/type II... 347 1e-93
gi|120597297|ref|YP_961871.1| ATPase, FliI/YscN family [She... 347 1e-93
gi|13475302|ref|NP_106866.1| ATP synthase in type III secre... 347 1e-93
gi|84363183|ref|ZP_00987782.1| COG1157: Flagellar biosynthe... 347 1e-93
gi|86158021|ref|YP_464806.1| ATPase FliI/YscN [Anaeromyxoba... 347 1e-93
gi|100267850|ref|ZP_01342017.1| hypothetical protein Bmal2_... 347 1e-93
gi|86153685|ref|ZP_01071888.1| flagellar protein export ATP... 347 1e-93
gi|154174001|ref|YP_001407433.1| flagellar protein export A... 347 1e-93
gi|1938379|gb|AAC45616.1| FliI [Caulobacter crescentus] 347 1e-93
gi|153834126|ref|ZP_01986793.1| flagellar protein export AT... 346 2e-93
gi|83616831|ref|ZP_00927414.1| COG1157: Flagellar biosynthe... 346 2e-93
gi|126174194|ref|YP_001050343.1| ATPase, FliI/YscN family [... 346 2e-93
gi|34498058|ref|NP_902273.1| flagellum-specific ATP synthas... 346 2e-93
gi|113969628|ref|YP_733421.1| flagellar protein export ATPa... 346 2e-93
gi|119476318|ref|ZP_01616669.1| flagellum-specific ATP synt... 346 2e-93
gi|117919793|ref|YP_868985.1| flagellar protein export ATPa... 346 3e-93
gi|118040242|ref|ZP_01511638.1| flagellar protein export AT... 345 3e-93
gi|115353163|ref|YP_775002.1| flagellar protein export ATPa... 345 3e-93
gi|90021830|ref|YP_527657.1| Sodium-transporting two-sector... 345 3e-93
gi|21242695|ref|NP_642277.1| flagellar protein [Xanthomonas... 345 4e-93
gi|153949483|ref|YP_001401262.1| flagellar protein export A... 345 5e-93
gi|113948280|ref|ZP_01433941.1| ATPase FliI/YscN [Shewanell... 345 5e-93
gi|126175125|ref|YP_001051274.1| flagellar protein export A... 345 5e-93
gi|153001449|ref|YP_001367130.1| flagellar protein export A... 345 5e-93
gi|56460305|ref|YP_155586.1| flagellum-specific ATP synthas... 345 5e-93
gi|149194683|ref|ZP_01871778.1| flagellum-specific ATP synt... 345 5e-93
gi|121608101|ref|YP_995908.1| flagellar protein export ATPa... 344 6e-93
gi|90577384|ref|ZP_01233195.1| putative flagellum-specific ... 344 7e-93
gi|91785614|ref|YP_560820.1| ATPase FliI/YscN [Burkholderia... 344 7e-93
gi|120598253|ref|YP_962827.1| flagellar protein export ATPa... 344 9e-93
gi|83747625|ref|ZP_00944661.1| FliI [Ralstonia solanacearum... 343 1e-92
gi|15802376|ref|NP_288402.1| flagellum-specific ATP synthas... 343 2e-92
gi|109672788|ref|ZP_01375022.1| flagellar protein export AT... 343 2e-92
gi|149189869|ref|ZP_01868149.1| putative flagellum-specific... 343 2e-92
gi|24374737|ref|NP_718780.1| flagellum-specific ATP synthas... 343 2e-92
gi|89072274|ref|ZP_01158853.1| putative flagellum-specific ... 342 2e-92
gi|153901159|ref|ZP_02021718.1| flagellar protein export AT... 342 2e-92
gi|16520041|ref|NP_444161.1| HrcN homolog [Rhizobium sp. NG... 342 2e-92
gi|77956155|ref|ZP_00820288.1| COG1157: Flagellar biosynthe... 342 3e-92
gi|85058028|ref|YP_453730.1| flagellum-specific ATP synthas... 342 3e-92
gi|110805911|ref|YP_689431.1| flagellum-specific ATP syntha... 342 3e-92
gi|118712291|ref|ZP_01564862.1| type III secretion apparatu... 342 3e-92
gi|17548614|ref|NP_521954.1| PROBABLE FLAGELLUM-SPECIFIC AT... 342 3e-92
gi|74317109|ref|YP_314849.1| flagella ATPase FliI [Thiobaci... 342 4e-92
gi|124546497|ref|ZP_01705573.1| flagellar protein export AT... 342 4e-92
gi|116696307|ref|YP_841883.1| Flagellum-specific ATP syntha... 342 4e-92
gi|53717869|ref|YP_106855.1| flagellum-specific ATP synthas... 342 4e-92
gi|148028899|gb|EDK86831.1| flagellum-specific ATP synthase... 342 4e-92
gi|156453381|ref|ZP_02059743.1| flagellar protein export AT... 342 5e-92
gi|91211159|ref|YP_541145.1| flagellum-specific ATP synthas... 342 5e-92
gi|52631924|gb|AAU85374.1| putative ATPase; HcrN; Y4yI [Sin... 342 5e-92
gi|114562363|ref|YP_749876.1| flagellar protein export ATPa... 341 5e-92
gi|76808788|ref|YP_331828.1| flagellar protein export ATPas... 341 5e-92
gi|116692941|ref|YP_838474.1| type III secretion apparatus ... 341 6e-92
gi|75190959|ref|ZP_00704226.1| COG1157: Flagellar biosynthe... 341 6e-92
gi|16129888|ref|NP_416451.1| flagellum-specific ATP synthas... 341 6e-92
gi|15831934|ref|NP_310707.1| flagellum-specific ATP synthas... 341 6e-92
gi|83719073|ref|YP_440755.1| flagellum-specific ATP synthas... 341 8e-92
gi|113950579|ref|ZP_01436200.1| ATPase FliI/YscN [Shewanell... 341 8e-92
gi|24113316|ref|NP_707826.1| flagellum-specific ATP synthas... 340 9e-92
gi|121530227|ref|ZP_01662836.1| Sodium-transporting two-sec... 340 1e-91
gi|29423534|gb|AAO73596.1| lateral flagellar FliI-like asse... 340 1e-91
gi|149119264|ref|ZP_01845741.1| flagellar protein export AT... 340 1e-91
gi|91795003|ref|YP_564654.1| ATPase FliI/YscN [Shewanella d... 340 1e-91
gi|156976205|ref|YP_001447111.1| hypothetical protein VIBHA... 340 1e-91
gi|28901388|ref|NP_801043.1| putative flagellum-specific AT... 340 1e-91
gi|153835939|ref|ZP_01988606.1| FliIL [Vibrio parahaemolyti... 340 1e-91
gi|76574801|gb|ABA47275.1| HrcN [Pseudomonas cichorii] 340 2e-91
gi|157084322|gb|ABV14000.1| hypothetical protein CKO_02894 ... 340 2e-91
gi|71281978|ref|YP_268247.1| flagellum-specific ATP synthas... 340 2e-91
gi|118066085|ref|ZP_01534345.1| ATPase, FliI/YscN family [S... 339 2e-91
gi|18092674|gb|AAL59403.1| BcscN [Burkholderia cepacia geno... 339 2e-91
gi|75513612|ref|ZP_00736003.1| COG1157: Flagellar biosynthe... 339 3e-91
gi|59889770|emb|CAH19125.1| Lateral flagellar export/assemb... 339 3e-91
gi|107025875|ref|YP_623386.1| ATP synthase FliI/YscN [Burkh... 338 4e-91
gi|118716510|ref|ZP_01569047.1| type III secretion apparatu... 338 4e-91
gi|153831717|ref|ZP_01984384.1| FliIL [Vibrio harveyi HY01]... 338 4e-91
gi|84502399|ref|ZP_01000535.1| flagellum-specific ATP synth... 338 5e-91
gi|156933439|ref|YP_001437355.1| hypothetical protein ESA_0... 338 6e-91
gi|92114081|ref|YP_574009.1| ATPase FliI/YscN [Chromohaloba... 338 6e-91
gi|86157817|ref|YP_464602.1| ATPase FliI/YscN [Anaeromyxoba... 337 7e-91
gi|91223214|ref|ZP_01258480.1| putative flagellum-specific ... 337 7e-91
gi|75239165|ref|ZP_00723142.1| COG1157: Flagellar biosynthe... 337 8e-91
gi|120613028|ref|YP_972706.1| flagellar protein export ATPa... 337 1e-90
gi|113935665|ref|ZP_01421562.1| ATPase FliI/YscN [Caulobact... 337 1e-90
gi|88794792|ref|ZP_01110497.1| flagellum-specific ATP synth... 337 1e-90
gi|84663099|gb|ABC60081.1| EsaN [Edwardsiella ictaluri] 337 2e-90
gi|38639342|gb|AAR25808.1| BcscN [Burkholderia multivorans] 336 2e-90
gi|85059279|ref|YP_454981.1| putative type III secretion AT... 336 2e-90
gi|110632469|ref|YP_672677.1| ATPase, FliI/YscN family [Mes... 336 2e-90
gi|91792685|ref|YP_562336.1| ATPase FliI/YscN [Shewanella d... 336 2e-90
gi|115358971|ref|YP_776109.1| type III secretion apparatus ... 336 3e-90
gi|87119484|ref|ZP_01075381.1| flagellum-specific ATP synth... 336 3e-90
gi|118694726|ref|ZP_01552810.1| type III secretion apparatu... 336 3e-90
gi|134294012|ref|YP_001117748.1| ATPase, FliI/YscN family [... 335 3e-90
gi|124516308|gb|EAY57816.1| putative flagellar ATPase FliI ... 335 4e-90
gi|116186213|ref|ZP_01476111.1| hypothetical protein VEx2w_... 335 4e-90
gi|83716747|ref|YP_438376.1| flagellum-specific ATP synthas... 334 8e-90
gi|57241768|ref|ZP_00369713.1| ATPase FliI/YscN family subf... 334 8e-90
gi|84360129|ref|ZP_00984841.1| COG1157: Flagellar biosynthe... 334 8e-90
gi|89899364|ref|YP_521835.1| ATPase FliI/YscN [Rhodoferax f... 334 9e-90
gi|118696416|ref|ZP_01554498.1| type III secretion apparatu... 333 1e-89
gi|118755472|ref|ZP_01603261.1| ATPase, FliI/YscN family [S... 333 1e-89
gi|83944173|ref|ZP_00956629.1| flagellum-specific ATP synth... 333 1e-89
gi|16127270|ref|NP_421834.1| flagellum-specific ATP synthas... 333 2e-89
gi|115360594|ref|YP_777731.1| type III secretion apparatus ... 333 2e-89
gi|146309428|ref|YP_001189893.1| ATPase, FliI/YscN family [... 332 2e-89
gi|83955127|ref|ZP_00963783.1| Flagellum-specific ATP synth... 330 9e-89
gi|27376927|ref|NP_768456.1| RhcN protein [Bradyrhizobium j... 330 1e-88
gi|118054218|ref|ZP_01522759.1| flagellar protein export AT... 330 1e-88
gi|134280666|ref|ZP_01767376.1| flagellum-specific ATP synt... 330 1e-88
gi|16121036|ref|NP_404349.1| flagellum-specific ATP synthas... 330 1e-88
gi|126445125|ref|YP_001061232.1| flagellum-specific ATP syn... 330 2e-88
gi|62199646|gb|AAX76920.1| EsaN [Edwardsiella tarda] 329 2e-88
gi|61743018|gb|AAX55238.1| EsaN [Edwardsiella tarda] 329 2e-88
gi|125657204|gb|ABN48692.1| flagella biosynthesis/type III ... 329 2e-88
gi|89204822|ref|ZP_01183397.1| ATPase FliI/YscN [Bacillus w... 329 3e-88
gi|114765225|ref|ZP_01444357.1| flagellum-specific ATP synt... 329 3e-88
gi|99911041|ref|ZP_01317968.1| hypothetical protein Bpse1_0... 328 3e-88
gi|51597645|ref|YP_071836.1| flagellum-specific ATP synthas... 328 3e-88
gi|32266064|ref|NP_860096.1| flagellum-specific ATP synthas... 328 4e-88
gi|1071643|gb|AAA82637.1| ATPase 328 4e-88
gi|153948482|ref|YP_001399626.1| flagellum-specific ATP syn... 328 4e-88
gi|118714265|ref|ZP_01566823.1| ATPase, FliI/YscN family [B... 328 5e-88
gi|145597809|ref|YP_001161885.1| flagellum-specific ATP syn... 327 1e-87
gi|71737205|ref|YP_274726.1| type III secretion component, ... 327 1e-87
gi|89068700|ref|ZP_01156086.1| flagellum-specific ATP synth... 327 1e-87
gi|118731777|ref|ZP_01580292.1| flagellar protein export AT... 326 2e-87
gi|15616698|ref|NP_239910.1| flagellum-specific ATP synthas... 326 3e-87
gi|15606716|ref|NP_214096.1| flagellar export protein [Aqui... 325 5e-87
gi|121596091|ref|YP_987987.1| flagellar protein export ATPa... 325 6e-87
gi|15804229|ref|NP_290268.1| escN [Escherichia coli O157:H7... 324 8e-87
gi|149201590|ref|ZP_01878564.1| FliI, Flagellum-specific AT... 324 1e-86
gi|1648933|gb|AAB17681.1| putative ATPase [Sinorhizobium fr... 323 1e-86
gi|2865290|gb|AAC38383.1| EscN [Escherichia coli] 323 1e-86
gi|108563771|ref|YP_628087.1| flagellum-specific ATP syntha... 323 1e-86
gi|85058543|ref|YP_454245.1| type III secretion apparatus S... 323 1e-86
gi|2731646|gb|AAB93498.1| ATPase [Helicobacter pylori] 323 2e-86
gi|15612380|ref|NP_224033.1| flagellum-specific ATP synthas... 322 2e-86
gi|15646029|ref|NP_208211.1| flagellum-specific ATP synthas... 322 2e-86
gi|42780842|ref|NP_978089.1| flagellum-specific ATP synthas... 322 3e-86
gi|47566132|ref|ZP_00237170.1| type III secretion cytoplasm... 322 3e-86
gi|90415349|ref|ZP_01223283.1| flagellum-specific ATP synth... 322 3e-86
gi|1890178|emb|CAA69911.1| F0/F1-ATPase [Helicobacter pylori] 322 4e-86
gi|118477185|ref|YP_894336.1| flagellum-specific ATP syntha... 322 5e-86
gi|52143708|ref|YP_083120.1| flagellum-specific ATP synthas... 321 6e-86
gi|34498451|ref|NP_902666.1| flagellum-specific ATP synthas... 321 6e-86
gi|75761139|ref|ZP_00741131.1| Flagellum-specific ATP synth... 321 7e-86
gi|30019794|ref|NP_831425.1| flagellum-specific ATP synthas... 321 8e-86
gi|18140083|gb|AAL60251.1|AF459637_1 putative EscN [Escheri... 320 1e-85
gi|152975161|ref|YP_001374678.1| ATPase, FliI/YscN family [... 320 1e-85
gi|30261747|ref|NP_844124.1| flagellum-specific ATP synthas... 320 2e-85
gi|68164517|gb|AAY87246.1| predicted flagellar biosynthesis... 320 2e-85
gi|15723922|gb|AAL06369.1|AF311901_21 EscN [Citrobacter rod... 319 2e-85
gi|109946732|ref|YP_663960.1| flagellum-specific ATP syntha... 318 4e-85
gi|124899715|gb|EAY71558.1| Flagellar biosynthesis/type III... 318 4e-85
gi|13447716|gb|AAK26715.1|AF200363_23 EscN [Escherichia col... 318 5e-85
gi|75212382|ref|ZP_00712406.1| COG1157: Flagellar biosynthe... 318 7e-85
gi|84358634|ref|ZP_00983406.1| COG1157: Flagellar biosynthe... 317 9e-85
gi|118588293|ref|ZP_01545702.1| flagellum-specific ATP synt... 317 1e-84
gi|57434457|emb|CAI43874.1| EscN protein [Escherichia coli] 316 2e-84
gi|84514813|ref|ZP_01002176.1| FliI, Flagellum-specific ATP... 315 5e-84
gi|50954407|ref|YP_061695.1| flagellum-like ATP synthase [L... 314 8e-84
gi|52630923|gb|AAU84925.1| putative flagellum-specific ATP ... 314 8e-84
gi|51103157|gb|AAT96299.1| HrcN [Pseudomonas viridiflava] 314 8e-84
gi|149912828|ref|ZP_01901362.1| flagellum-specific ATP synt... 314 9e-84
gi|21492905|ref|NP_659980.1| type III secretion system ATP ... 314 9e-84
gi|51103115|gb|AAT96258.1| HrcN [Pseudomonas viridiflava] 314 1e-83
gi|66044464|ref|YP_234305.1| type III secretion cytoplasmic... 313 2e-83
gi|51103198|gb|AAT96339.1| HrcN [Pseudomonas viridiflava] 313 2e-83
gi|19749325|gb|AAL98695.1| Y4yI [Sinorhizobium fredii] 311 4e-83
gi|25008474|sp|Q8KA42|FLII_BUCAP Flagellum-specific ATP syn... 311 5e-83
gi|34098419|sp|Q52371|HRCN_PSESY Type III secretion ATP syn... 311 5e-83
gi|83717980|ref|YP_439029.1| type III secretion system prot... 311 7e-83
gi|30410813|ref|NP_660429.2| flagellum-specific ATP synthas... 311 8e-83
gi|119947164|ref|YP_944844.1| ATPase, FliI/YscN family prot... 310 1e-82
gi|56695106|ref|YP_165453.1| H+-transporting two-sector ATP... 310 1e-82
gi|116872105|ref|YP_848886.1| flagellum-specific ATP syntha... 310 1e-82
gi|110677657|ref|YP_680664.1| flagellum-specific ATP syntha... 310 1e-82
>gi|42526727|ref|NP_971825.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
35405]
gi|41817042|gb|AAS11736.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
35405]
Length = 474
Score = 903 bits (2333), Expect = 0.0, Method: Composition-based stats.
Identities = 474/474 (100%), Positives = 474/474 (100%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV
Sbjct: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS
Sbjct: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA
Sbjct: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI
Sbjct: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE
Sbjct: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR
Sbjct: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD
Sbjct: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
Query: 421 PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN 474
PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN
Sbjct: 421 PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN 474
>gi|2105151|gb|AAB57902.1| FliI [Treponema denticola]
Length = 473
Score = 840 bits (2169), Expect = 0.0, Method: Composition-based stats.
Identities = 443/474 (93%), Positives = 449/474 (94%), Gaps = 1/474 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV
Sbjct: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VGLNGTIVQLMSYTDVQGVKIG L++ + E P G VDALCKSADGKPEPYS
Sbjct: 61 VGLNGTIVQLMSYTDVQGVKIGTLLLQA-EKFYRPGWKYFTGPCVDALCKSADGKPEPYS 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA
Sbjct: 120 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 179
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSD+ LARIRGAYTATAI
Sbjct: 180 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDRKCLARIRGAYTATAI 239
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE
Sbjct: 240 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 299
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSIS + +
Sbjct: 300 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISSIIQQ 359
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
G KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD
Sbjct: 360 SIGTKHKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 419
Query: 421 PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN 474
PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN
Sbjct: 420 PAKLKDTLQKLSDITGIDIPPEEFDEAGLGVGAIKKYAQSSEASALYKPDREVN 473
>gi|15639393|ref|NP_218842.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|6016024|sp|O83417|FLII_TREPA Flagellum-specific ATP synthase
gi|3322685|gb|AAC65390.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
pallidum str. Nichols]
Length = 447
Score = 511 bits (1315), Expect = e-143, Method: Composition-based stats.
Identities = 271/441 (61%), Positives = 339/441 (76%), Gaps = 2/441 (0%)
Query: 3 DLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVG 62
DL KY A+ E++P+K+ G V V LIES GP A VGELC+I+ L AEVVG
Sbjct: 4 DLLCKYEVALRESEPVKYVGHVTAVRGLLIESRGPHAVVGELCRIVLRRQGRPLIAEVVG 63
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
L G+ V+LMSYTD GV++G V+A G LSVPVG+ LLGRV++A K+ DGK E Y+
Sbjct: 64 LAGSTVKLMSYTDTHGVEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPL 123
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
R V+ + + M R PI +++VTG+R +DSLLAVG GQRLGIF+G+G+GKSTL+GMIARN
Sbjct: 124 RSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTLMGMIARN 183
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T+ADV+VIALIGERGREV+DF+ HDLGPEGLK SVIVSATSD+S LAR+RGAYTATAIAE
Sbjct: 184 TDADVSVIALIGERGREVMDFVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAE 243
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKG 302
YFRDQGK V+LLFDS+TRFA AQREIGLA GE PATRGYTP VF +LPKLLER+G+ G
Sbjct: 244 YFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSFSMG 303
Query: 303 SITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVS 362
S+T FYTVLV+GDD++EPISDAVRGI+DGHIVL R LA+R YPA++VL+S+SRL++RV
Sbjct: 304 SVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVL 363
Query: 363 GPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPA 422
G + K+A + +R L Y E ED++ +GAYQ+GS A +D AI + FLTQ +
Sbjct: 364 GADMKEAVRIVRRALAVYAEVEDLVRVGAYQQGSDAELDRAIAMRAELERFLTQGAQERV 423
Query: 423 KLKDTLQKLSDITGIDI--PP 441
+ +DT+ LS +TG+ I PP
Sbjct: 424 RFQDTVTSLSMLTGLSIAQPP 444
>gi|124521665|ref|ZP_01696539.1| flagellar protein export ATPase FliI [Bacillus coagulans 36D1]
gi|124496627|gb|EAY44214.1| flagellar protein export ATPase FliI [Bacillus coagulans 36D1]
Length = 441
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 248/422 (58%), Positives = 318/422 (75%), Gaps = 2/422 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDD--NPDGLKAEVVGLNGTIVQ 69
+ E K G+V RV +IES GP +S+G++C I D+ N + AEVVG V
Sbjct: 10 IPEIGTFKHYGKVKRVIGLMIESLGPESSIGDVCYIHVDNKKNTKKIIAEVVGFRDGNVI 69
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
LM YT++Q + G LV A+G+ + V G LLG+V+D L D P P K P+ +
Sbjct: 70 LMPYTNIQEISPGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLDHSPLPAGLKPIPIDRT 129
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP+ + R PIR+ I G+RAIDSLL VG+GQR+GIFAG+G+GKSTLLGMIARNTNAD+NV
Sbjct: 130 PPNPLKRPPIREPIELGVRAIDSLLTVGKGQRIGIFAGSGVGKSTLLGMIARNTNADLNV 189
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
IALIGERGREV +FIE DLGPEGLK S++V ATSDQ AL RI+GAYTATAIAEYFRDQG
Sbjct: 190 IALIGERGREVREFIEQDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAIAEYFRDQGL 249
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
+VM + DSVTR AMAQRE+GLA GEPPAT+GYTPSVF+ LPKLLER+GT+E G+ITG YT
Sbjct: 250 NVMFMMDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTGTNESGTITGIYT 309
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLV+GDD+NEPI+D VRGILDGH VLDR+LA +GQYPA+N+LKS+SRL ++++ P K A
Sbjct: 310 VLVDGDDLNEPIADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASPAHKKA 369
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
++++R L Y SED+IN+GAY+ G+S ID+AI+ YP+I F+ Q D+ ++ +++
Sbjct: 370 AEKIREQLSTYLNSEDLINIGAYKPGASKEIDEAIERYPKIVSFIKQSTDETYSMESSIR 429
Query: 430 KL 431
L
Sbjct: 430 AL 431
>gi|126653746|ref|ZP_01725664.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
gi|126589710|gb|EAZ83846.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
Length = 441
Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats.
Identities = 246/417 (58%), Positives = 316/417 (75%), Gaps = 3/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDG---LKAEVVGLNGTIVQLMSYTDVQG 78
GRV RV +IES+GP +S+G++C+I + +G + AEVVG IV LM +T ++
Sbjct: 20 GRVTRVVGLMIESQGPDSSIGDVCKIHVETVNNGHQIILAEVVGFKDEIVVLMPFTSLRE 79
Query: 79 VKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKP 138
+ IG LV +G L V VG L+G+V+D++ DG P P PP+ +TR P
Sbjct: 80 ISIGCLVEGTGAPLEVKVGPELIGKVLDSMGNPIDGTLLPKGLMTVPTEQDPPNPLTRPP 139
Query: 139 IRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGR 198
I +R+ G++AID +L VG GQR+GIFAG+G+GKSTLLGMIARNT AD+NVIALIGERGR
Sbjct: 140 INERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKSTLLGMIARNTQADLNVIALIGERGR 199
Query: 199 EVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSV 258
EV +FIE DLGPEGL S++V+ATSDQ AL RI+GA+TATAIAEYFR++G +VML+ DSV
Sbjct: 200 EVREFIERDLGPEGLSRSIVVAATSDQPALMRIKGAFTATAIAEYFRNRGLNVMLMMDSV 259
Query: 259 TRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMN 318
TR AMAQREIGLA GEPPA +GYTPSVF+ LPKLLER+GT+EKGSIT FYTVLV+GDDMN
Sbjct: 260 TRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLLERTGTNEKGSITAFYTVLVDGDDMN 319
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
EPI+D VRGILDGHIVLDRNLA +GQYPA+NVLKS+SRL N V+ P K A++R+R L
Sbjct: 320 EPIADTVRGILDGHIVLDRNLANKGQYPAINVLKSVSRLMNHVAEPEHKKAAERLRELYY 379
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
Y +SED+IN+GAY++G+S ID+AI + P I +L Q D L++++ +L ++
Sbjct: 380 TYDKSEDLINIGAYKRGTSREIDEAIHYEPLITTYLKQGYLDKVTLEESVNELISLS 436
>gi|23099013|ref|NP_692479.1| flagellum-specific ATP synthase [Oceanobacillus iheyensis HTE831]
gi|22777241|dbj|BAC13514.1| flagellar-specific H(+)-transporting ATP synthase [Oceanobacillus
iheyensis HTE831]
Length = 439
Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats.
Identities = 245/433 (56%), Positives = 323/433 (74%), Gaps = 2/433 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVG 62
+ D+Y + +++ D K G+V+RV +IESEGP A++GE+C I T N D L AEVVG
Sbjct: 1 MIDQYRDVIAKVDTYKRYGKVIRVVGLMIESEGPTANIGEVCNIKTSANTDHALLAEVVG 60
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE-PYSA 121
+ LM YT+V V G LV A+G+ L+V VG L+G+V+++L K + E P
Sbjct: 61 FRNEKIILMPYTEVTEVGPGCLVEATGKPLTVKVGRGLVGKVLNSLGKPLNDTEELPKGL 120
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ +PP+ + R PIR + G++AIDSLL +G GQR+G+FAG+G+GKSTLLGMIAR
Sbjct: 121 ANFMTEQTPPNPLERPPIRTPLQVGVKAIDSLLTMGEGQRVGLFAGSGVGKSTLLGMIAR 180
Query: 182 NTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIA 241
N++A++NVIALIGERGREV +FIE+DLGPEGLK S++V ATSDQ AL RI+GAYTATAI+
Sbjct: 181 NSSAEINVIALIGERGREVREFIENDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAIS 240
Query: 242 EYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK 301
EYFRD G V L+ DSVTR AMAQREIGLA+GEPP T+GYTPSVFS LPKLLER+GT+
Sbjct: 241 EYFRDLGYKVNLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFSILPKLLERTGTNAN 300
Query: 302 GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRV 361
G+ITGFYTVLV+GDDMNEPI+DAVRGILDGH +LDR LAERGQ+PA+NVLKSISR+ N +
Sbjct: 301 GTITGFYTVLVDGDDMNEPIADAVRGILDGHFILDRKLAERGQFPAINVLKSISRVMNVI 360
Query: 362 SGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDP 421
+ K+ S+ +R LL Y E++++I +GAY+KG++ ID AI P I +FL Q + +
Sbjct: 361 ADEEHKEQSQTLRKLLSTYEENQELITIGAYKKGTNHEIDQAISFQPYILEFLKQGIHEK 420
Query: 422 AKLKDTLQKLSDI 434
+T+Q + ++
Sbjct: 421 RTFDETIQMMKNL 433
>gi|52080226|ref|YP_079017.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
gi|52785603|ref|YP_091432.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
gi|52003437|gb|AAU23379.1| flagellar-specific ATP synthase [Bacillus licheniformis ATCC 14580]
gi|52348105|gb|AAU40739.1| FliI [Bacillus licheniformis DSM 13]
Length = 437
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 244/434 (56%), Positives = 318/434 (73%), Gaps = 1/434 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITD-DNPDGLKAEVVG 62
+ + + D K G+V + +IES+GP S+G++C+I T D P +KAEVVG
Sbjct: 1 MLKQLLECIETADSYKRYGKVKQAVGLMIESKGPECSIGDVCKIYTKGDGPKAIKAEVVG 60
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+ LM Y + + G +V A+GE L V VG+ L+G+VVDA DG P
Sbjct: 61 FKDQNILLMPYLEAANIAPGSIVEATGESLRVKVGSGLIGQVVDAFGNPLDGSVLPKGLA 120
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
+ +PP+ M R PIR+++ G+R+IDSLL VG+GQR+GIFAG+G+GKSTL+GMIAR
Sbjct: 121 QVSTDQAPPNPMKRPPIREKMAVGVRSIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARE 180
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T AD+NVIAL+GERGREV +FIE DLG EGLK +++V ATSDQ AL R++ AYTATAIAE
Sbjct: 181 TAADLNVIALVGERGREVREFIEKDLGEEGLKRTIVVVATSDQPALMRLKAAYTATAIAE 240
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKG 302
YFRD+G++VM + DSVTR AMAQREIGLA GEPP T+GYTPSVF+ LPKLLER+GT+E G
Sbjct: 241 YFRDKGQNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTGTTESG 300
Query: 303 SITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVS 362
SIT FYTVLV+GDDMNEPI+D VRGILDGHIVLDR LA +GQ+PAVN+LKSISR+ + ++
Sbjct: 301 SITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNIA 360
Query: 363 GPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPA 422
+ A+ R R +L Y SED+IN+GAY+KGSS ID+AI +P++ FL QEVD+ A
Sbjct: 361 EKDHIRAANRFREMLSTYQNSEDLINIGAYKKGSSREIDEAIQFHPKLISFLKQEVDEAA 420
Query: 423 KLKDTLQKLSDITG 436
L++++ L +TG
Sbjct: 421 SLEESISLLKSLTG 434
>gi|149182506|ref|ZP_01860979.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
gi|148849766|gb|EDL63943.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
Length = 440
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 237/413 (57%), Positives = 317/413 (76%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V RV +IES+GP +S+G++C I + ++AEVVG V LM Y+++ +
Sbjct: 20 GKVKRVVGLMIESQGPKSSIGDMCFIHLSETRRKIRAEVVGFKEETVILMPYSNINEISP 79
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G LV A+ + L++ VG+ L+G+VVD+L DG+ P PP +TR PI +
Sbjct: 80 GSLVEATSKPLTIKVGHSLIGKVVDSLGNPLDGESLPKGLTPAFTEQDPPSPLTRPPINE 139
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+I G+RAIDS+L VG+GQR+GIFAG+G+GKSTLLGMIARNT AD+NVIALIGERGREV
Sbjct: 140 KIEVGVRAIDSMLTVGKGQRVGIFAGSGVGKSTLLGMIARNTTADLNVIALIGERGREVR 199
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE DLG EGLK S++V+ATSDQ AL RI+GA+TATAIAEYFRD+G +VML+ DSVTR
Sbjct: 200 EFIERDLGEEGLKKSIVVAATSDQPALMRIKGAFTATAIAEYFRDKGMNVMLMMDSVTRV 259
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQREIGLA+GEPPAT+GYTPSVF+ LPKLLER+GT+E G+IT FYTVLV+GDDMNEPI
Sbjct: 260 AMAQREIGLAVGEPPATKGYTPSVFAILPKLLERTGTNEHGTITAFYTVLVDGDDMNEPI 319
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+D RGILDGHIVLDRN+A +GQ+PA+NVL+S+SRL N ++ P+ A++++R L+ Y+
Sbjct: 320 ADTTRGILDGHIVLDRNIANKGQFPAINVLRSVSRLMNHLASPDHLRAAEKIRELMSTYS 379
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
SED+IN+GAY+KG+S ID AI + P+I FL Q + L+++++ + ++
Sbjct: 380 NSEDLINIGAYKKGTSQEIDQAITYQPKILSFLKQGTGERVTLEESVRDIINL 432
>gi|16078687|ref|NP_389506.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|120331|sp|P23445|FLII_BACSU Flagellum-specific ATP synthase
gi|580859|emb|CAA39523.1| unnamed protein product [Bacillus subtilis]
gi|2633996|emb|CAB13497.1| flagellar-specific ATP synthase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 440
Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats.
Identities = 246/425 (57%), Positives = 315/425 (74%), Gaps = 6/425 (1%)
Query: 15 TDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG-LKAEVVGLNGTIVQLMSY 73
TD K G+V RV +IES+GP +S+G+LC I +KAEVVG + LM Y
Sbjct: 16 TDSYKRYGKVKRVIGLMIESKGPASSIGDLCLIYAKGQSGKVIKAEVVGFQEENILLMPY 75
Query: 74 TDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVA--SPP 131
+ + G +V A+GE L V VG L+G+V+DA + D E + K PV SPP
Sbjct: 76 LEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD---ESFCRKVSPVSTEQSPP 132
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
+ M R PIR+++ G+R+IDSLL VG+GQR+GIFAG+G+GKSTL+GMIA+ T AD+NVIA
Sbjct: 133 NPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIA 192
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
L+GERGREV +FIE DLG EGLK S++V ATSDQ AL R++ AYTATAIAEYFRD+G++V
Sbjct: 193 LVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNV 252
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
M + DSVTR AMAQREIGLA GEPP T+GYTPSVF+ LP+LLER+G +E G+IT FYTVL
Sbjct: 253 MFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANEHGTITAFYTVL 312
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
V+GDDMNEPI+D VRGILDGHIVLDR LA +GQ+PAVNVLKSISR+ + +S DA+
Sbjct: 313 VDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAAN 372
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+ R LL Y SED+IN+GAY++GSS ID+AI YP++ FL Q D+PA L++++ L
Sbjct: 373 KFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPALLEESIAAL 432
Query: 432 SDITG 436
+ +TG
Sbjct: 433 TSLTG 437
>gi|56419757|ref|YP_147075.1| flagellum-specific ATP synthase [Geobacillus kaustophilus HTA426]
gi|56379599|dbj|BAD75507.1| flagellar-specific ATP synthase [Geobacillus kaustophilus HTA426]
Length = 422
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 237/410 (57%), Positives = 304/410 (74%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V RV ++ES+GP +S+G+LC I + AEVVG + V LM ++ + +
Sbjct: 6 GKVSRVIGLMMESKGPKSSIGDLCYIHEQSGCRKIPAEVVGFHEQHVLLMPFSAMSHIAP 65
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G LV A+G L V VG+ L+G V+D L + DG P P K V PP+ + R PI +
Sbjct: 66 GCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGSPLPPGLKPVSVERDPPNPLVRPPIVE 125
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIR IDSLLAVG+GQR+GIFAG+G+GKSTL+GMIAR+T+ADVNVIALIGERGREV
Sbjct: 126 PLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARHTSADVNVIALIGERGREVR 185
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F+E DLGP+GL SV+V ATSDQ AL R++GAYTATAIAEYFRDQG DVML+ DSVTR
Sbjct: 186 EFLERDLGPDGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVMLMMDSVTRV 245
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQREIGLA+GEPP T+GYTPSVF+ LPKLLER+GT+ G+IT FYTVLV+GDDMNEPI
Sbjct: 246 AMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNASGTITAFYTVLVDGDDMNEPI 305
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+DAVRGILDGH VL+R LA +G YPA+NVLKS+SR+ + ++A+ R R LL Y
Sbjct: 306 ADAVRGILDGHFVLERQLANKGHYPAINVLKSVSRVMPHMISAEHREAANRFRRLLSTYI 365
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+SED+I +GAY++GSS ID+AI+ YP++ F Q +D+ +++ L
Sbjct: 366 DSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFCRQNIDEKTTRAESIDAL 415
>gi|138894743|ref|YP_001125196.1| Flagellar-specific ATP synthase [Geobacillus thermodenitrificans
NG80-2]
gi|134266256|gb|ABO66451.1| Flagellar-specific ATP synthase [Geobacillus thermodenitrificans
NG80-2]
Length = 423
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 238/410 (58%), Positives = 303/410 (73%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V RV + ES+GP +S+G+LC I + AEVVG + V LM ++ + +
Sbjct: 6 GKVSRVIGLMTESKGPESSIGDLCYIHETSGGRKIPAEVVGFHEQHVLLMPFSSMAHIAP 65
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G LV A+G+ L V VG+ L+G V+D + + DG P K V PP+ + R PI +
Sbjct: 66 GCLVEATGKPLEVYVGDALIGTVLDPIGRPLDGSALPLGLKPVSVERDPPNPLARPPIAE 125
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+R IDSLLAVG+GQR+GIFAG+G+GKSTL+GMIAR T+ADVNVIALIGERGREV
Sbjct: 126 PLEVGVRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARRTSADVNVIALIGERGREVR 185
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F+E DLGPEGL SV+V ATSDQ AL R++GAYTATAIAEYFRDQG DVML+ DSVTR
Sbjct: 186 EFLERDLGPEGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVMLMMDSVTRV 245
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQREIGLA+GEPP T+GYTPSVF+ LPKLLER+GT+ G+IT FYTVLV+GDDMNEPI
Sbjct: 246 AMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNASGTITAFYTVLVDGDDMNEPI 305
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+DAVRGILDGH VL+R LA +GQYPA+NVLKS+SR+ + ++A+ R+R LL Y
Sbjct: 306 ADAVRGILDGHFVLERQLANKGQYPAINVLKSVSRVMPHIISAEHREAANRVRRLLSTYI 365
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+SED+I +GAY+ GSS ID+AI YP+I F QE+D+ +++ L
Sbjct: 366 DSEDLIQIGAYKHGSSREIDEAIQFYPQIMAFCRQEIDEKTTRAESIDAL 415
>gi|89098641|ref|ZP_01171523.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
gi|89086603|gb|EAR65722.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
Length = 438
Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats.
Identities = 240/421 (57%), Positives = 306/421 (72%), Gaps = 1/421 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQL 70
+ + D K G+V +V +IES+GP +S+G++C I + + AEVVG V L
Sbjct: 10 IGQIDTYKRYGKVKKVVGLMIESQGPESSIGDVCIIHVGSGKKRKIMAEVVGFKEENVIL 69
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASP 130
M YT + + G LV A+ + L + +G L+G V+DAL DGK P P P
Sbjct: 70 MPYTAISEIAPGSLVEATLKPLEIKIGTSLIGEVIDALGHPLDGKALPKGLASVPTEQDP 129
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P+ M R PI + G+RAIDSLL VG GQR+GIFAG+G+GKSTLLGM+ARNT AD+NVI
Sbjct: 130 PNPMNRPPISAPVEVGVRAIDSLLTVGYGQRVGIFAGSGVGKSTLLGMVARNTKADLNVI 189
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
ALIGERGREV +FIE+DLG EGLK S++++ATSDQ AL RI+GAYTATAIAEYFRD+G +
Sbjct: 190 ALIGERGREVREFIENDLGEEGLKRSIVIAATSDQPALMRIKGAYTATAIAEYFRDKGLN 249
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTV 310
V+L+ DSVTR AMAQRE+GLAIGEPP T+GYTPSVF+ LPKLLER+GT+ KGSIT FYTV
Sbjct: 250 VVLMMDSVTRVAMAQREVGLAIGEPPTTKGYTPSVFAVLPKLLERTGTNHKGSITAFYTV 309
Query: 311 LVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDAS 370
LV+GDDMNEPI+D VRGILDGH VLDR LA +GQYPA+NVLKS+SR+ N + K ++
Sbjct: 310 LVDGDDMNEPIADTVRGILDGHFVLDRALANKGQYPAINVLKSVSRVMNNIVPHEHKKSA 369
Query: 371 KRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQK 430
+ +R L Y SED+IN+GAY+KG+S ID A+ YP I FL Q ++ ++D++Q
Sbjct: 370 ELLRERLSTYINSEDLINIGAYKKGTSREIDQAVRLYPEIISFLKQGTEEKVTMQDSIQH 429
Query: 431 L 431
L
Sbjct: 430 L 430
>gi|154686040|ref|YP_001421201.1| FliI [Bacillus amyloliquefaciens FZB42]
gi|154351891|gb|ABS73970.1| FliI [Bacillus amyloliquefaciens FZB42]
Length = 438
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 239/428 (55%), Positives = 319/428 (74%), Gaps = 1/428 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVGLNGTIV 68
+++ DP K G+V RV +IES+GP +S+G++C I + +KAEVVG +
Sbjct: 8 DSIETADPYKRYGKVKRVIGLMIESKGPESSIGDVCLIYPKGHAKKAIKAEVVGFQDENI 67
Query: 69 QLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVA 128
LM Y + + G +V A+GE L + VG L+G+VVDA + DG+ P
Sbjct: 68 LLMPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGRALPKGLSPVSTEQ 127
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PP+ M R PIR+++ G+R+IDSLL VG+GQR+GIFAG+G+GKSTL+GMIA+ T AD+N
Sbjct: 128 PPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLN 187
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
+IAL+GERGREV +FIE DLG EGLK S++V ATSDQ AL R++ AYTATAIAEYFRD+G
Sbjct: 188 IIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKG 247
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
++VM + DSVTR AMAQREIGLA GEPP T+GYTPSVF+ LP+LLER+G +E+G+IT FY
Sbjct: 248 RNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANEQGTITAFY 307
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLV+GDDMNEPI+D VRGILDGHIVLDR LA +GQ+PAVN+LKSISR+ + +S + +
Sbjct: 308 TVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNISDTSHIE 367
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
A+ + R LL Y SED+IN+GAY++GSS ID+AI YP++ FL Q ++PA+L+D++
Sbjct: 368 AANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTEEPAQLEDSI 427
Query: 429 QKLSDITG 436
L+ +TG
Sbjct: 428 AALTSLTG 435
>gi|76796419|ref|ZP_00778781.1| ATPase FliI/YscN [Thermoanaerobacter ethanolicus ATCC 33223]
gi|114843722|ref|ZP_01454184.1| ATPase FliI/YscN [Thermoanaerobacter ethanolicus X514]
gi|76588183|gb|EAO64593.1| ATPase FliI/YscN [Thermoanaerobacter ethanolicus ATCC 33223]
gi|114806323|gb|EAU58102.1| ATPase FliI/YscN [Thermoanaerobacter ethanolicus X514]
Length = 437
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 242/428 (56%), Positives = 309/428 (72%), Gaps = 1/428 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
+ +KY A+ E I++ G+V +V IES GP++++GE+C I T N + + AEVVG
Sbjct: 5 VLNKYKKALQEKRLIQYYGKVSQVIGLTIESTGPLSNIGEICNIKTI-NGNTILAEVVGF 63
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
V LM +++G+ G VIA+G+ L V VGN LLGRV+D L DGK K
Sbjct: 64 KEEKVYLMPLGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKGPIKFEKS 123
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
P+ PPD + RK IR+ + GI+AID LL G+GQR+GIFAG+G+GKSTLLGM+ARN
Sbjct: 124 IPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNA 183
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
AD+NVIALIGERGREV +F+E DLG EGLK SV+V ATSD AL R++GA TATAIAEY
Sbjct: 184 KADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTATAIAEY 243
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG DV+L+ DSVTRFAMAQRE+GL+IGE P +RGYTPSVFS LPKLLERSG S+KGS
Sbjct: 244 FRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSGCSKKGS 303
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLV+GDD+NEPI+DAVRGILDGHIVL R LA + YPA++VL S+SR+ N +
Sbjct: 304 ITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIIT 363
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
K+ R + +L YTE+ED+IN+GAY GS+ ID+AI+ ++ +FL Q +D+
Sbjct: 364 EEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLRQRIDESYD 423
Query: 424 LKDTLQKL 431
+ T Q L
Sbjct: 424 FETTKQLL 431
>gi|68055857|ref|ZP_00539997.1| ATPase FliI/YscN [Exiguobacterium sibiricum 255-15]
gi|68007580|gb|EAM86832.1| ATPase FliI/YscN [Exiguobacterium sibiricum 255-15]
Length = 437
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 236/421 (56%), Positives = 315/421 (74%), Gaps = 3/421 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVA-SVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
V + ++ +G+VV+V +IES GP A ++GE C +I D ++AEVVG V L
Sbjct: 14 VRREELVEHSGKVVQVIGLMIESRGPTAVAIGERC-LIRIHRGDEIEAEVVGFREGHVLL 72
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASP 130
M Y + + G +VIA+G+ L VPVG+ L+G V+D L +S DGK + + +V P
Sbjct: 73 MPYGETTAIAPGSIVIATGKPLHVPVGDDLIGTVLDGLGRSLDGKSLAH-LRTTSIVRKP 131
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P + R I + + TGIRAID LL VG+GQR+G+FAG+G+GKSTLLGMIA+ + AD+NVI
Sbjct: 132 PSPLDRPRIDEVLSTGIRAIDGLLTVGQGQRVGLFAGSGVGKSTLLGMIAKRSMADINVI 191
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
ALIGERGREV +FIE +LG EG+ S+IV ATSDQ L R++GAYTATAIAEYFRDQGK+
Sbjct: 192 ALIGERGREVKEFIEAELGEEGMSRSIIVVATSDQPPLVRLKGAYTATAIAEYFRDQGKN 251
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTV 310
V+L+ DSVTRFAMAQREIGLA GEPPA++GYTPSVF+ LP+LLERSG + +GSIT FYTV
Sbjct: 252 VVLMMDSVTRFAMAQREIGLATGEPPASKGYTPSVFALLPQLLERSGKTTEGSITAFYTV 311
Query: 311 LVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDAS 370
LV+GDDMNEPI+DAVRGILDGH VLDRNLA +GQYPA+++L+SISR+ N+++ KD++
Sbjct: 312 LVDGDDMNEPIADAVRGILDGHFVLDRNLANKGQYPAIHILRSISRVMNQITSTEHKDSA 371
Query: 371 KRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQK 430
R LL Y ++ED+IN+GAY+ G++ ID A++ YP + FL Q V++ + +D + +
Sbjct: 372 ITFRQLLSTYLDAEDLINIGAYKSGTNPDIDRAVEKYPELIGFLKQRVEEKSHFEDGMSR 431
Query: 431 L 431
L
Sbjct: 432 L 432
>gi|15615018|ref|NP_243321.1| flagellum-specific ATP synthase [Bacillus halodurans C-125]
gi|10175075|dbj|BAB06174.1| flagellar-specific ATP synthase [Bacillus halodurans C-125]
Length = 437
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 235/413 (56%), Positives = 298/413 (72%)
Query: 19 KFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQG 78
K+ G+V RV IE++GP AS+GELC I+ + AEVVG V LM
Sbjct: 17 KWYGKVTRVIGLTIEAKGPQASIGELCYILVGKQGTKVMAEVVGFKEERVLLMPLNGTAE 76
Query: 79 VKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKP 138
+ G LV +G L V VG L+G V+D + G+ P YP PP+ ++R
Sbjct: 77 IAPGSLVEGTGRPLQVKVGYSLIGHVIDGCGRPLTGEALPNGLTPYPTDNPPPNPISRPR 136
Query: 139 IRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGR 198
I++ + G+RAID LL VG+GQR+GIFAG+G+GKSTLL M+A+N AD+N+IALIGERGR
Sbjct: 137 IKEAMHLGVRAIDGLLTVGKGQRVGIFAGSGVGKSTLLAMLAKNAAADLNIIALIGERGR 196
Query: 199 EVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSV 258
EV DFIE DLG +GL+ S+IV ATSDQ AL RI+GA TATA+AEYFRDQG V L+ DSV
Sbjct: 197 EVKDFIERDLGEDGLRRSIIVVATSDQPALMRIKGAMTATALAEYFRDQGLHVNLMMDSV 256
Query: 259 TRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMN 318
TRFAMAQREIGLA+GEPP T+GYTPSVF+ LPKLLER+GT+ KGSITGFYTVLV+GDD+N
Sbjct: 257 TRFAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNGKGSITGFYTVLVDGDDLN 316
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
EPISD VRGILDGH VLDR LA +G YPA+N+LKS+SR+ N + K A++ +R+LL
Sbjct: 317 EPISDTVRGILDGHFVLDRELANKGHYPAINILKSVSRVMNDIVTDEQKRAAEHVRSLLS 376
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
Y ESED+IN+GAY++GSS ID+AI+ P + FL Q D+ A + ++Q+L
Sbjct: 377 VYKESEDLINIGAYKRGSSKQIDEAIERQPEVISFLRQNTDEVAIAEHSIQQL 429
>gi|134300244|ref|YP_001113740.1| flagellar protein export ATPase FliI [Desulfotomaculum reducens
MI-1]
gi|134052944|gb|ABO50915.1| flagellar protein export ATPase FliI [Desulfotomaculum reducens
MI-1]
Length = 442
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 236/432 (54%), Positives = 308/432 (71%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
+ Y VS IK G+V RV +IE +G A +GE+C I+ P+ ++AEVVG
Sbjct: 9 LNPYKERVSRARVIKPIGKVTRVIGLMIEVQGITARIGEVCDIVAQGEPEPVRAEVVGFR 68
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
LM +++G+ G VI SG L++ VG L G+V+D L + D + S + +
Sbjct: 69 DQFSLLMPLGELRGIYPGCAVIPSGHNLTIKVGKHLQGKVLDGLGRPIDKTVDYASGQEF 128
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
V PP+ + RK I + TG+RA+D+LL G+GQR+GIFAG+G+GKSTLLGMIAR+ +
Sbjct: 129 LVDNKPPNPLKRKRIDSVLPTGVRAVDALLTCGKGQRIGIFAGSGVGKSTLLGMIARHGS 188
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGREVL+F+E DLGP+G+ SVIV+ATSDQ AL R++GA+ ATAIAEYF
Sbjct: 189 ADVNVIALIGERGREVLEFLEEDLGPQGMARSVIVAATSDQPALVRLKGAFVATAIAEYF 248
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RDQG DVML+ DSVTRFAMAQRE+GLA+GEPPAT+GYTPSVF+ LPKLLERSG ++GSI
Sbjct: 249 RDQGLDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGMGQQGSI 308
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVLV+GDD+NEPI+DAVRGILDGHIVL R LA YPA++VL+S+SRL ++
Sbjct: 309 TAFYTVLVDGDDLNEPIADAVRGILDGHIVLTRKLASANHYPAIDVLQSVSRLMPDIASD 368
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
K+ + +R LL Y ESED+IN+GAY GS+ ID AI + I +L Q + +
Sbjct: 369 QHKNQAGNLRDLLATYQESEDLINIGAYVLGSNPKIDHAISKHDEIIGYLRQSPLEYSSY 428
Query: 425 KDTLQKLSDITG 436
++TL L+D+ G
Sbjct: 429 EETLNGLADLVG 440
>gi|15642991|ref|NP_228033.1| flagellum-specific ATP synthase [Thermotoga maritima MSB8]
gi|4980716|gb|AAD35310.1|AE001706_9 flagellum-specific ATP synthase [Thermotoga maritima MSB8]
Length = 438
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 232/434 (53%), Positives = 310/434 (71%), Gaps = 2/434 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M D+ + +SE D KF GRV RV +ES+GP A +GE+C+I + + L AEV
Sbjct: 1 MKDILKELKKKLSEEDFNKFNGRVTRVVGLTVESKGPDAFLGEMCKISLQNGKNAL-AEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG V LM Y DV G+K+G VI + ++L V V ++GRV D L + DGKP
Sbjct: 60 VGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPF-VP 118
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
RYP++ +PP+ + R+ I+ + GIR+ID + +G+GQR+GIFAG+G+GKSTLLGMIA
Sbjct: 119 EDRYPLINNPPNPLKRRRIKDPLPVGIRSIDGFITIGKGQRIGIFAGSGVGKSTLLGMIA 178
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNT AD+NV+ALIGERGREV +FIE DLG EGLK S++V +TSDQ ALAR++ TAT+I
Sbjct: 179 RNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLTATSI 238
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AE+FRD G DV+L+ DS+TR+AMAQRE+GLA+GEPP TRGY PSVF+ LPK+LER+G S+
Sbjct: 239 AEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERAGNSD 298
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KGSIT YTVLVE DD NEPISD VR I+DGHI+L R LAE YPAV+VL S+SRL N
Sbjct: 299 KGSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASVSRLMND 358
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ ++A+ R+R+L+ Y ++D+I +GAY+ G++ +D A++ I FL Q V +
Sbjct: 359 IVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFLKQGVFE 418
Query: 421 PAKLKDTLQKLSDI 434
A ++TLQKL D+
Sbjct: 419 KASFEETLQKLLDL 432
>gi|146296283|ref|YP_001180054.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409859|gb|ABP66863.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 431
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 234/431 (54%), Positives = 304/431 (70%), Gaps = 2/431 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
+F++ + T+ +FTG V +V IES GP S+G LC+I T + AEVVG
Sbjct: 1 MFERLKTKIESTNFYQFTGFVNQVIGLTIESIGPAVSIGTLCKIKTAKSET--LAEVVGF 58
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
V LM Y+D+ G+ G VIA I V VG LLGR++D L + DGK E S +
Sbjct: 59 KENKVLLMPYSDLVGIFPGCKVIAQDSIFEVKVGEELLGRILDGLGQPIDGKGEIKSKIK 118
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
YPV P+ + R I + GI+AID+L+ +G+GQR+GIFAG+G+GKSTLLGMIARN
Sbjct: 119 YPVENRAPNPLERPRIDSVMPLGIKAIDALITIGKGQRVGIFAGSGVGKSTLLGMIARNA 178
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADVNV+ALIGERGRE+ +F+E DL EGLK SV++ ATSD+SAL R++ AY A AIAEY
Sbjct: 179 KADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVIVATSDESALKRVKAAYVAMAIAEY 238
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG DV+ + DS+TRFAMAQREIGLAIGEPP +RGYTPSVFS +PKLLER+G ++KGS
Sbjct: 239 FRDQGMDVLFMMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAGKNQKGS 298
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLV+GDD NEPI+D RGILDGHIVL R++A + YPA++VL SISR+ N +
Sbjct: 299 ITALYTVLVDGDDFNEPITDTARGILDGHIVLSRSIANKNHYPAIDVLASISRVMNDIVS 358
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P K+ + + +L Y E+ED+I +GAY KG+++ ID AID PRI +FL Q+VD+ +
Sbjct: 359 PEHKEVANETKRILATYKEAEDLITIGAYTKGTNSEIDRAIDLMPRINEFLRQDVDESFE 418
Query: 424 LKDTLQKLSDI 434
+ L+ L I
Sbjct: 419 FEQELEMLKSI 429
>gi|150390484|ref|YP_001320533.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
QYMF]
gi|149950346|gb|ABR48874.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
QYMF]
Length = 436
Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats.
Identities = 231/432 (53%), Positives = 307/432 (71%)
Query: 3 DLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVG 62
+L KY A++E D +K+TGRV +V IE+ GP +GE+C+I + + AE VG
Sbjct: 4 NLLKKYQVALNELDLVKYTGRVSQVIGLTIEAIGPAVKIGEVCKIFPLKGANPILAEAVG 63
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
V LM +++G+ G V A+G LS+ VG LLGR++D L DGK +
Sbjct: 64 FREKKVLLMPLGEMEGIGPGSKVEATGSTLSINVGEALLGRILDGLGNPIDGKGPIEAHT 123
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
YP + SP + + RK I++ + G++AID LL+ G GQR+GIFAG+G+GKSTLLGMIARN
Sbjct: 124 AYPAMGSPVNPLLRKTIKEPLSLGVKAIDGLLSCGNGQRIGIFAGSGVGKSTLLGMIARN 183
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T AD+NVIALIGERGREV +FIE DL EGLK SV++ ATSDQ AL R++GA AT++AE
Sbjct: 184 TRADINVIALIGERGREVKEFIEKDLKEEGLKRSVVIVATSDQPALIRMKGALLATSVAE 243
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKG 302
YFRD K+VMLL DS+TRF+MAQRE+GLAIGEPP T+GYTPSVF+ LPKLLERSGTS+KG
Sbjct: 244 YFRDHNKNVMLLMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAILPKLLERSGTSDKG 303
Query: 303 SITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVS 362
+ITG YTVLV+GDDMNEPI+DAVRGILDGHIVL R +A R YPA++VL S+SR+ + +
Sbjct: 304 AITGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVMDSIV 363
Query: 363 GPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPA 422
G + ++ +L Y ++ED+IN+GAY KGS+ ID AI+ + +FL Q D+
Sbjct: 364 GKEHIKLANELKEILSTYNDAEDLINIGAYVKGSNPKIDRAIEKIDAVNEFLIQTTDEKI 423
Query: 423 KLKDTLQKLSDI 434
++++ + I
Sbjct: 424 TFQESVDIMKKI 435
>gi|20807886|ref|NP_623057.1| Flagellar biosynthesis/type III secretory pathway ATPase
[Thermoanaerobacter tengcongensis MB4]
gi|20516451|gb|AAM24661.1| Flagellar biosynthesis/type III secretory pathway ATPase
[Thermoanaerobacter tengcongensis MB4]
Length = 437
Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats.
Identities = 238/429 (55%), Positives = 309/429 (72%), Gaps = 1/429 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
+ +KY+ + E + + G+V +V IES GP++++GE+C I T D + L AEVVG
Sbjct: 5 VLEKYSKILREKRLVGYYGKVSQVIGLTIESVGPLSNIGEICYIKTIDGNEVL-AEVVGF 63
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
V LM +++G+ G VIA+G+ L V VG LLGRV+D L DGK K
Sbjct: 64 KEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPLKYEKS 123
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV +PPD + RK IR+ + GI+AID LL G+GQR+GIFAG+G+GKSTLLGM+ARN
Sbjct: 124 IPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNA 183
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
AD+NVIALIGERGREV +FIE DLG EGLK SV+V ATSD AL R++GA TATAIAEY
Sbjct: 184 KADLNVIALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPALVRVKGAMTATAIAEY 243
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG DV+L+ DS+TRFAMAQREIGL+IGE P +RGYTPSVFS LPKLLERSG+S+KGS
Sbjct: 244 FRDQGLDVLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERSGSSQKGS 303
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLV+GDD+NEPI+DAVRGILDGHIVL R LA + YPA++VL S+SR+ N +
Sbjct: 304 ITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIIT 363
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
K+ + + +L Y E+ED+IN+GAY G++ ID+AI+ ++ FL Q++D+
Sbjct: 364 DEHKELVAKFKNILATYAEAEDLINIGAYNFGTNPKIDEAIELNEKMNSFLRQKIDEAYD 423
Query: 424 LKDTLQKLS 432
+ T + L+
Sbjct: 424 FETTKKLLA 432
>gi|106894641|ref|ZP_01361758.1| ATPase FliI/YscN [Clostridium sp. OhILAs]
gi|106774106|gb|EAT30673.1| ATPase FliI/YscN [Clostridium sp. OhILAs]
Length = 437
Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats.
Identities = 233/428 (54%), Positives = 303/428 (70%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
KY A+S+ D IK+TG V +V IES GP +GE+C+I + + + +EVVG
Sbjct: 8 KYEEALSKLDLIKYTGYVSQVIGLTIESVGPAVKLGEMCKIYSLKGTEPILSEVVGFKEK 67
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
V LM +++G+ G V A G + V VG LLGRV+D L D K + K YPV
Sbjct: 68 KVLLMPLGEMEGIGPGSKVEALGITMQVSVGEELLGRVLDGLGNPIDDKELLNTNKTYPV 127
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
+A+PP+ + R I + + G++ +D LL G GQR+GIFAG+G+GKSTLLGMIARNT AD
Sbjct: 128 MAAPPNPLKRTKINEPLALGVKTLDGLLTCGNGQRIGIFAGSGVGKSTLLGMIARNTQAD 187
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
+NVIALIGERGREV +FIE+DL EGLK SV++ ATSDQ AL R +GA ATA+AEYFRD
Sbjct: 188 INVIALIGERGREVREFIENDLQEEGLKRSVVIVATSDQPALIRKKGALLATAVAEYFRD 247
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
QGK+V+L+ DS+TRF+MAQRE+GLA+GEPP +RGYTPSVF+ LPKLLERSGTS+KGSITG
Sbjct: 248 QGKNVILMMDSLTRFSMAQREVGLAVGEPPVSRGYTPSVFAELPKLLERSGTSDKGSITG 307
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLV+GDDMNEPI+D VRGILDGHIVL R +A R YPA++VL S+SR+ +
Sbjct: 308 LYTVLVDGDDMNEPIADTVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVMPNIVEKKH 367
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
+ ++ LL Y SED+IN+GAY KG++ ID++I+ I FL Q+V D L+D
Sbjct: 368 LLIANEIKELLSTYNSSEDLINIGAYIKGTNRRIDESINKIDSINSFLRQDVHDKTTLED 427
Query: 427 TLQKLSDI 434
+ + +I
Sbjct: 428 AITMMEEI 435
>gi|148269842|ref|YP_001244302.1| flagellar protein export ATPase FliI [Thermotoga petrophila RKU-1]
gi|147735386|gb|ABQ46726.1| flagellar protein export ATPase FliI [Thermotoga petrophila RKU-1]
Length = 427
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 231/423 (54%), Positives = 305/423 (72%), Gaps = 2/423 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+SE D KF GRV RV +ES+GP A +GE+C+I + + L AEVVG V LM
Sbjct: 1 MSEEDFNKFNGRVTRVVGLTVESKGPDAFLGEMCKISLQNGKNAL-AEVVGFREESVILM 59
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPP 131
Y DV G+K+ VI + ++L V V ++GRV D L + DGKP RYP+ +PP
Sbjct: 60 PYEDVSGLKMSCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPF-VPEDRYPLTNNPP 118
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
+ + R+ I+ + GIR+ID L+ VG+GQR+GIFAG+G+GKSTLLGMIARNT ADVNV+A
Sbjct: 119 NPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFAGSGVGKSTLLGMIARNTTADVNVLA 178
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
LIGERGREV +FIE DLG EGLK S++V +TSDQ ALAR++ TAT+IAE+FRD G DV
Sbjct: 179 LIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLTATSIAEFFRDLGYDV 238
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
+L+ DS+TR+AMAQRE+GLA+GEPP TRGY PSVF+ LPK+LER+G S+KGSIT YTVL
Sbjct: 239 LLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERAGNSDKGSITAIYTVL 298
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
VE DD NEPISD VR I+DGHI+L R LAE YPAV+VL S+SRL N + ++A+
Sbjct: 299 VEADDFNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASVSRLMNDIVTEEHREAAN 358
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
R+R+L+ Y ++D+I +GAY+ G++ +D A++ I FL Q V + + ++TLQKL
Sbjct: 359 RLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFLKQGVFEKSSFEETLQKL 418
Query: 432 SDI 434
D+
Sbjct: 419 LDL 421
>gi|125972989|ref|YP_001036899.1| flagellar protein export ATPase FliI [Clostridium thermocellum ATCC
27405]
gi|125713214|gb|ABN51706.1| flagellar protein export ATPase FliI [Clostridium thermocellum ATCC
27405]
Length = 437
Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 231/430 (53%), Positives = 304/430 (70%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F KY + + D I++TG+V +V IES GP ++GE+C+I + AE VG
Sbjct: 6 FSKYYDVLDNRDFIEYTGKVSKVVGLTIESNGPEVNIGEICKINALRENKVISAEAVGFR 65
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM D+ G+ G V+A+ + LSV VGN L+GRV+D + + DGK E + Y
Sbjct: 66 DNKVLLMPLGDMNGIGPGSKVVATRDYLSVGVGNALIGRVIDGMGRPIDGKGEIVTETTY 125
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
PV PP + R I++ + G++ ID LL VG+GQR+GIFAG+G+GKSTL+GMIARNT
Sbjct: 126 PVENKPPHPLKRNRIKEPLPLGVKTIDGLLTVGKGQRVGIFAGSGVGKSTLIGMIARNTK 185
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGREV +FIE DL EGLK SV+V ATSDQ AL R++GA ATAIAEYF
Sbjct: 186 ADVNVIALIGERGREVREFIEKDLKEEGLKRSVVVVATSDQPALIRLKGALMATAIAEYF 245
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RDQGKDV+LL DS+TRFAMAQREIGL+IGEPP +RGYTPSVFS +PKLLER+G S+ GSI
Sbjct: 246 RDQGKDVLLLMDSLTRFAMAQREIGLSIGEPPVSRGYTPSVFSIMPKLLERAGNSQSGSI 305
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLV+GDD+ EP++D RGILDGHIVL RNLA + QYPA++VL S+SR+ +
Sbjct: 306 TGLYTVLVDGDDLTEPVTDTARGILDGHIVLSRNLANKNQYPAIDVLASVSRVMPDIVDD 365
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ + ++ + Y E+ED+IN+GAY KGS+ ID AI+ +I +F+ Q V +
Sbjct: 366 EHQKIANDIKKTMAIYREAEDLINVGAYAKGSNEKIDYAIEVIDKIQEFIKQGVHERYSY 425
Query: 425 KDTLQKLSDI 434
++T+ + ++
Sbjct: 426 EETINLMKNV 435
>gi|28211328|ref|NP_782272.1| flagellum-specific ATP synthase [Clostridium tetani E88]
gi|28203768|gb|AAO36209.1| flagellum-specific ATP synthase [Clostridium tetani E88]
Length = 446
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 235/430 (54%), Positives = 303/430 (70%), Gaps = 2/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F+ + ETD + G V +V IE EG A +GE+C I N + + EVVG
Sbjct: 12 FNYINKKIKETDYYSYEGVVKKVIGLTIEVEGIKAFIGEVCTIYNQQN-NPIVCEVVGFV 70
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM ++ G+ G VI SG LSV L G+V+D L +G+ + + Y
Sbjct: 71 EDNVILMPLGELIGIAPGCRVIPSGNPLSVKCSEELFGKVLDGLGSPLNGE-KIKTGVPY 129
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ PPD + R+ I+ I TG+RAID L G GQR+GIFAG+G+GKST LGMIA+
Sbjct: 130 PLDREPPDPLKRRRIKDVIPTGVRAIDGYLTCGEGQRIGIFAGSGVGKSTSLGMIAKYAE 189
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVI LIGERGREVLDF+E DLG EG+K S+++ ATSD+ AL RI+GA+TATAIAEYF
Sbjct: 190 ADVNVICLIGERGREVLDFVEKDLGEEGMKKSIVICATSDKPALVRIKGAFTATAIAEYF 249
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RD+GK V+L+ DSVTRFAMAQRE+GLAIGEPPAT+GYTPSVF+ LP+L+ERSG S+KGSI
Sbjct: 250 RDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDKGSI 309
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVLV+GDD NEPI+DAVRGILDGHIVL R+LA + YPA+++L SISRL N +S
Sbjct: 310 TAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAAKNHYPAIDILSSISRLMNEISVK 369
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
K+++ R L+ Y E+ED+IN+GAY KGS+ ID AI + I +FLTQ+VD+
Sbjct: 370 EHKESASIGRDLIATYKEAEDLINIGAYVKGSNEKIDIAIKYIDSINEFLTQKVDEHNNF 429
Query: 425 KDTLQKLSDI 434
++++Q L+ I
Sbjct: 430 EESIQWLNSI 439
>gi|147678420|ref|YP_001212635.1| flagellar biosynthesis/type III secretory pathway ATPase
[Pelotomaculum thermopropionicum SI]
gi|146274517|dbj|BAF60266.1| flagellar biosynthesis/type III secretory pathway ATPase
[Pelotomaculum thermopropionicum SI]
Length = 446
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 228/428 (53%), Positives = 307/428 (71%), Gaps = 1/428 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTI 67
+ + + E ++ TG+V RV +E +G AS+GE+C+I P+ ++AEVVG
Sbjct: 11 WRSRLKEARLLRLTGQVTRVIGLTVEVKGINASIGEVCEITVPGEPEPVRAEVVGFRDGS 70
Query: 68 VQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADG-KPEPYSAKRYPV 126
LM +++G+ G V SG ++ VG LLGRV++ L + DG P + YPV
Sbjct: 71 TLLMPLGELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPV 130
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
PP+ + R+ I + + TG+RA+D LL GRGQR+GIF+G+G+GKSTLLGM++R ++AD
Sbjct: 131 DNRPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTLLGMVSRFSDAD 190
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
VNVI LIGERGREVLDFIE DLGPEGL SV+V ATS+Q AL R++GA+ A A+AEYFRD
Sbjct: 191 VNVIGLIGERGREVLDFIETDLGPEGLARSVVVVATSEQPALVRLKGAFVACAVAEYFRD 250
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
QG+DV+L+ DS+TRFAMAQRE+GLAIGEPPAT+GYTPSVF+ LP+LLER+G S GSIT
Sbjct: 251 QGRDVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMSSAGSITA 310
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
F+TVLV+GDD+NEPISDAVRGILDGHIVL R+LA +PAV+VL S+SRL ++
Sbjct: 311 FFTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLNSVSRLMPDITTEEH 370
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
+ + R+R LL Y ++ED+IN+GAY GS+ +D+AI Y I FL Q++ + A+ ++
Sbjct: 371 RAWAGRLRDLLAAYRQAEDLINIGAYVAGSNPRVDEAIACYQDIVAFLRQDLKEHARFEE 430
Query: 427 TLQKLSDI 434
TL L I
Sbjct: 431 TLAMLEKI 438
>gi|109646047|ref|ZP_01369967.1| ATPase, FliI/YscN family [Desulfitobacterium hafniense DCB-2]
gi|109643996|gb|EAT53549.1| ATPase, FliI/YscN family [Desulfitobacterium hafniense DCB-2]
Length = 433
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 230/420 (54%), Positives = 299/420 (71%), Gaps = 2/420 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+S+ D I GRV ++ +IES+GP SVGE C+I T + + AEVVG + LM
Sbjct: 11 MSDLDLIVSHGRVAKIVGLMIESDGPRVSVGEYCRIHTQQGKE-IPAEVVGFRNSTTLLM 69
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPP 131
+++G+ GD V+ L V VG LLGR++D L + DG+P + + YP+ +PP
Sbjct: 70 PLAELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPM-VTQRDYPLQNAPP 128
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
A R IR + G+R +D +L +GRGQR+GIFAG+G+GKSTLLGM+ARNT A VNVIA
Sbjct: 129 SAFLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIA 188
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
L+GERGRE+ DFIE DLG EGL+ SV+V ATSDQ AL R++ A+TATAIAEYFRDQG+DV
Sbjct: 189 LVGERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDV 248
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
+L+ DSVTRFAMAQRE+GL GEPPATRGY PSVF+ LPKLLERSG SE GSITG YTVL
Sbjct: 249 LLMMDSVTRFAMAQREVGLTAGEPPATRGYPPSVFAMLPKLLERSGMSEIGSITGIYTVL 308
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
V+GDD NEPI+D VRGILDGHIVL R LA + YPA++ L+S+SR+ N + P K+ +
Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
++R L Y +++D+I++GAY GS+ ID AI H I FL Q+V++ L++L
Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQDVEEKVSFDQMLRQL 428
>gi|83589626|ref|YP_429635.1| ATPase FliI/YscN [Moorella thermoacetica ATCC 39073]
gi|83572540|gb|ABC19092.1| ATPase FliI/YscN [Moorella thermoacetica ATCC 39073]
Length = 436
Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 231/413 (55%), Positives = 303/413 (73%), Gaps = 2/413 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V RV IE+ G A++GELC+I ++ + AEVVG + LM +++G+
Sbjct: 24 GKVTRVTGLTIEARGLKAAIGELCRIY-NNGSGPIVAEVVGFREEVTLLMPLGELEGIGP 82
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G VIA+G + VG LLGRV+D L +S DG S PV PP+ ++R+ I++
Sbjct: 83 GCRVIATGRGHYIRVGEELLGRVLDGLGRSLDGTVL-VSGDPQPVNNRPPNPLSRRRIKE 141
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG++AID+LL G GQR+GIFAG+G+GKSTLLGMIAR++ AD+NVIALIGERGREV
Sbjct: 142 VLATGVKAIDALLTCGCGQRVGIFAGSGVGKSTLLGMIARHSTADINVIALIGERGREVR 201
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
DFIE DLGPEGL S++V+ATSDQ AL RI+GA+TATAIAEYFRDQGK+V+L+ DS+TRF
Sbjct: 202 DFIEGDLGPEGLARSIVVAATSDQPALVRIKGAFTATAIAEYFRDQGKNVLLMMDSLTRF 261
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A+AQRE+GLAIGEPP TRGYTPSVF+SLPKL+ER+G E+GSITG YTVLVEGDDMNEP+
Sbjct: 262 AIAQREVGLAIGEPPTTRGYTPSVFASLPKLVERAGNGERGSITGLYTVLVEGDDMNEPV 321
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+D VRG+LDGHIVL R LA YPA++VL+SISRL ++ ++ + ++R LL Y
Sbjct: 322 ADTVRGLLDGHIVLSRRLAAANHYPAIDVLQSISRLMPEITSREQQEQAGKLRDLLAAYQ 381
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E+ D+I +GAYQ GS+ +D A+ ++ I FL Q D+ +DTL L+ I
Sbjct: 382 EAADLIEIGAYQAGSNPRVDAALKYHEAIQSFLRQGKDEYFAFQDTLAALAGI 434
>gi|89210109|ref|ZP_01188501.1| ATPase FliI/YscN [Halothermothrix orenii H 168]
gi|89160182|gb|EAR79838.1| ATPase FliI/YscN [Halothermothrix orenii H 168]
Length = 437
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 233/433 (53%), Positives = 306/433 (70%), Gaps = 3/433 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F + T+ V + G + RV +IES+GP S+GE+C I + +KAEVVG +
Sbjct: 6 FSQLTSVVDRARVTRNYGHITRVVGLIIESKGPEVSIGEICLI--KNGKRSVKAEVVGFD 63
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKS-ADGKPEPYSAKR 123
V LM +++G+ G V+A+GE L+V VG LLG+V++ L + + G +
Sbjct: 64 KDKVLLMPIGEMRGINPGARVVATGEKLTVKVGEGLLGQVLNGLGQPISSGLKMRHGFTE 123
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV+A PPD + RK I + + GIR+ID LL GRGQR+GIFAG+G+GKSTLLGM ARNT
Sbjct: 124 VPVMAQPPDPLLRKRITEPLSLGIRSIDGLLTCGRGQRVGIFAGSGVGKSTLLGMAARNT 183
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
AD+NVI L+GERGREV DFIE DLGPEGLK S++V ATSD+ AL R++ AY ATAIAE+
Sbjct: 184 EADINVIGLVGERGREVRDFIERDLGPEGLKKSIVVVATSDKPALVRVKAAYVATAIAEF 243
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQGK+V+L+ DSVTR AMA RE+GLA+GEPPATRGY PSV++ LPKLLER+GT++ G+
Sbjct: 244 FRDQGKNVLLMMDSVTRVAMAFREVGLAVGEPPATRGYPPSVYAELPKLLERAGTNQHGT 303
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLVEGDD NEP+SD VRGILDGHIVL R+LA R YPAV+VL+S+SRL +
Sbjct: 304 ITALYTVLVEGDDFNEPVSDTVRGILDGHIVLSRDLASRNHYPAVDVLESVSRLMPDIVD 363
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
A+ ++ +L DY ESED+IN+GAY+ GS+ AID A+++ I FL Q + +
Sbjct: 364 EEHLQAAGEVKKMLADYRESEDLINIGAYKPGSNPAIDRALENINDINTFLRQGIGQKSS 423
Query: 424 LKDTLQKLSDITG 436
++T+ L I G
Sbjct: 424 FEETVTMLKQIAG 436
>gi|89895732|ref|YP_519219.1| hypothetical protein DSY2986 [Desulfitobacterium hafniense Y51]
gi|89335180|dbj|BAE84775.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 433
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 228/409 (55%), Positives = 295/409 (72%), Gaps = 2/409 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+S+ D I GRV ++ +IES+GP SVGE C+I T + + AEVVG + LM
Sbjct: 11 ISDLDLIVSHGRVAKIVGLMIESDGPRVSVGEYCRIHTQQGKE-IPAEVVGFRNSTTLLM 69
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPP 131
+++G+ GD V+ L V VG LLGR++D L + DG+P + + YP+ +PP
Sbjct: 70 PLAELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPM-VTHRDYPLQNAPP 128
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
A R IR + G+R +D +L +GRGQR+GIFAG+G+GKSTLLGM+ARNT A VNVIA
Sbjct: 129 SAFLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIA 188
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
L+GERGRE+ DFIE DLG EGL+ SV+V ATSDQ AL R++ A+TATAIAEYFRDQG+DV
Sbjct: 189 LVGERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDV 248
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
+L+ DSVTRFAMAQRE+GL GEPPATRGY PSVF+ LPKLLERSG SE GSITG YTVL
Sbjct: 249 LLMMDSVTRFAMAQREVGLTTGEPPATRGYPPSVFAMLPKLLERSGMSEIGSITGIYTVL 308
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
V+GDD NEPI+D VRGILDGHIVL R LA + YPA++ L+S+SR+ N + P K+ +
Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
++R L Y +++D+I++GAY GS+ ID AI H I FL Q+V++
Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQDVEE 417
>gi|150019077|ref|YP_001311331.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
NCIMB 8052]
gi|149905542|gb|ABR36375.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
NCIMB 8052]
Length = 438
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 238/434 (54%), Positives = 297/434 (68%), Gaps = 4/434 (0%)
Query: 1 MVDL---FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK 57
M+DL FDK S+ I G V +V IE +G A VGELC I + N +
Sbjct: 1 MLDLDLDFDKIIKKASDASTIYSEGVVKKVIGLTIEVQGIKAFVGELCIIYNEKNVP-VN 59
Query: 58 AEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE 117
EVVG V LM ++ G+ G V+ + LSV + LLG ++D L D
Sbjct: 60 CEVVGFRDEFVILMPLDELIGISPGCRVVPQRKPLSVKCSDKLLGHIIDGLGNPLDCDSI 119
Query: 118 PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLG 177
+ YP+ PD + RK I++ + TG+RAID L G GQR+GIFAG+G+GKST LG
Sbjct: 120 SMDGEEYPLENDAPDPLKRKRIKEIMPTGVRAIDGFLTCGDGQRIGIFAGSGVGKSTTLG 179
Query: 178 MIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTA 237
MIAR ADVNVI+LIGERGREVL+FIE DLGPEG+K SV+V ATSD+ AL RI+GA TA
Sbjct: 180 MIAREAKADVNVISLIGERGREVLEFIEKDLGPEGMKKSVVVCATSDKPALIRIKGALTA 239
Query: 238 TAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG 297
TAIAEYFRD+GK V+L+ DSVTRFAMAQRE+GLAIGEPPAT+GYTPSVF+ LPKL+ERSG
Sbjct: 240 TAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAKLPKLMERSG 299
Query: 298 TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRL 357
TS GSIT FYTVLV+GDD NEPI+DAVRGILDGHIVL R+LA + YPA+++L S+SRL
Sbjct: 300 TSADGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAHKNHYPAIDILNSVSRL 359
Query: 358 SNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQE 417
N ++ K+A+ R LL Y +SED+IN+GAY KGS+ ID AI++ + DFL Q
Sbjct: 360 MNTIAPKEHKEAASMARDLLATYKDSEDLINIGAYVKGSNKKIDMAINYNDSLNDFLCQG 419
Query: 418 VDDPAKLKDTLQKL 431
+D+ + T L
Sbjct: 420 IDERTSFEGTQNSL 433
>gi|56964031|ref|YP_175762.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
gi|56910274|dbj|BAD64801.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
Length = 437
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 241/433 (55%), Positives = 301/433 (69%), Gaps = 13/433 (3%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK--AEVVGLN 64
K + V P K+ G+V IES GP A +GELC I + G K AEVVG
Sbjct: 3 KLIDHVHTLSPYKWYGQVRHAAGLTIESAGPRAFIGELCYIWASPDQKGTKVRAEVVGFK 62
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK-- 122
+ LM D + + G V +G+ L+V G L+G++V+ + G+P SA
Sbjct: 63 DDRILLMPLDDTRRIAPGSYVEGTGKPLNVACGPSLIGQIVNGV-----GEPFLQSAALG 117
Query: 123 ----RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGM 178
Y SPP+ + R I + + G+RAID LL +G+GQR+GIFAG+G+GKSTL+ M
Sbjct: 118 DTDANYSTDNSPPNPLERPRISEIMSVGVRAIDGLLTMGKGQRVGIFAGSGVGKSTLMSM 177
Query: 179 IARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTAT 238
IA+ ++ADVNVIALIGERGREV +F+E DLG EGLK SV+V ATSDQ AL R++GA TAT
Sbjct: 178 IAKQSDADVNVIALIGERGREVKEFVERDLGEEGLKKSVVVVATSDQPALLRVKGAQTAT 237
Query: 239 AIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT 298
AIAEYFRD+GK+V L+ DSVTRFAMAQREIGLAIGEPP T+GY PSVF+ +PKLLERSGT
Sbjct: 238 AIAEYFRDKGKNVNLMMDSVTRFAMAQREIGLAIGEPPTTKGYPPSVFAMMPKLLERSGT 297
Query: 299 SEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLS 358
++ GSITG YTVLV+GDDMNEPI+DAVRGILDGH VLDR LA RGQYPAVNVLKS+SRL
Sbjct: 298 NQSGSITGLYTVLVDGDDMNEPIADAVRGILDGHFVLDRQLANRGQYPAVNVLKSVSRLM 357
Query: 359 NRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV 418
+ + A+K R L DY +SED+I+LGAY++GSS ID AI +P + DFL QEV
Sbjct: 358 KDLVENDHLHAAKLFRQRLADYEQSEDLISLGAYKQGSSKDIDAAIHDHPAMLDFLKQEV 417
Query: 419 DDPAKLKDTLQKL 431
++ +T KL
Sbjct: 418 EESDSFAETKTKL 430
>gi|114566387|ref|YP_753541.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337322|gb|ABI68170.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 442
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 228/430 (53%), Positives = 308/430 (71%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGL-KAEVVGL 63
+KY +A+ +T + GR+ + IE+ GP +GELC + T+ + L AEVVG
Sbjct: 9 LEKYLDALDKTTTCQLKGRISQAIGLTIEATGPRVRMGELCFLQTNYSDRQLVPAEVVGF 68
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ LM +++G+ G ++ASG L V VG L+GRV++ L + D + S
Sbjct: 69 KDKKILLMPLGNLEGIGPGSELLASGTTLRVQVGMELVGRVLNGLGEPIDDRGRIKSETT 128
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
YPV PP + RK I + + G++AID L+++G+GQR+GI AG+G+GKSTL+GMIARNT
Sbjct: 129 YPVTNQPPSPLKRKRITEVLQVGVKAIDGLVSIGKGQRMGILAGSGVGKSTLIGMIARNT 188
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
AD+NVIALIGERGREV +F+E DLG EGL SV+V ATSDQ AL R++GA+ AT+IAEY
Sbjct: 189 EADINVIALIGERGREVREFLERDLGEEGLGKSVVVVATSDQPALVRLKGAFVATSIAEY 248
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQGKDV+ L DSVTRFA+AQRE+GLAIGEPPATRGYTPSVF+ LPKLLER+GTSEKG+
Sbjct: 249 FRDQGKDVLFLMDSVTRFALAQREVGLAIGEPPATRGYTPSVFAMLPKLLERAGTSEKGT 308
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
ITG Y+VLVEGDD+NEPI+DAVRGILDGHI L R+LA YPA++V +SISR+ ++
Sbjct: 309 ITGLYSVLVEGDDLNEPITDAVRGILDGHIALSRSLAAMNLYPAIDVGQSISRVMIDIAS 368
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P + R R++L Y E+ D+I++GAY+KGS+ ID++I + +F+ Q++ D A
Sbjct: 369 PKHIKNANRFRSILATYEEARDLIDIGAYKKGSNPRIDESIALIDKCQNFIRQDIYDEAN 428
Query: 424 LKDTLQKLSD 433
+ TL+ L +
Sbjct: 429 ITTTLENLEE 438
>gi|118442915|ref|YP_877978.1| flagellum-specific ATP synthase [Clostridium novyi NT]
gi|118133371|gb|ABK60415.1| flagellum-specific ATP synthase [Clostridium novyi NT]
Length = 438
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 230/430 (53%), Positives = 302/430 (70%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F+ N +++ D G V +V IE EG A VGE+C I +N + + EVVG
Sbjct: 7 FENIKNKIAKCDFKYTEGLVKQVIGLTIEVEGIKAFVGEVCTIYNKEN-EPIMCEVVGFK 65
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM ++ G+ G V+ S + LSV + LLG+V++ L K + E Y
Sbjct: 66 EDNVILMPLGELIGIGPGCKVVPSKKYLSVKCSDDLLGKVLNGLGKPLKSEEELPIGVDY 125
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ +PPD + R+ I+ I TG+RA+D L G GQR+GIFAG+G+GKST LGMIAR
Sbjct: 126 PLDTAPPDPLKRRRIKDEIATGVRAVDGFLTCGEGQRIGIFAGSGVGKSTTLGMIAREAK 185
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
AD+NVIALIGERGREVLDFIE DLG EGLK SVIV ATSDQ AL R++GA+TATAIAEYF
Sbjct: 186 ADINVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAEYF 245
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RD+GK V+L+ DSVTRFAMAQRE+GLAIGEPPAT+GYTPSVF+ LP+L+ERSG S+KGSI
Sbjct: 246 RDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDKGSI 305
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVLV+GDD NEPI+DAVRGILDGHIVL R LA + YPA+++L S+SRL + ++
Sbjct: 306 TAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSVSRLMSEIATD 365
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
K A+ R LL Y SED+IN+GAY +GS+ +D AI + + D+L Q + + ++
Sbjct: 366 EHKKAASLARDLLATYKNSEDLINIGAYVRGSNPKVDMAIQYNDELNDYLRQGIKEHSEF 425
Query: 425 KDTLQKLSDI 434
++++ +L ++
Sbjct: 426 QESVTRLVNM 435
>gi|121533760|ref|ZP_01665587.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
Nor1]
gi|121307751|gb|EAX48666.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
Nor1]
Length = 439
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 237/430 (55%), Positives = 305/430 (70%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F++Y AV + ++ G++ ++ +IES GP ++GELC I + AEVVG
Sbjct: 6 FERYLGAVKSAETMRLNGKITQIIGLVIESRGPSVNLGELCYIHPRSGGKPIPAEVVGFR 65
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM +++G+ G VIA+ L V VG LLGRV+D L DGK +A Y
Sbjct: 66 PNHVLLMPIGELEGIGPGCSVIAANRTLKVGVGPDLLGRVLDGLGNPIDGKGPVATAAEY 125
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A PP ++R+ I + + G+RAID L +GRGQR+GI AG+G+GKSTLLGMIARNT
Sbjct: 126 PLHALPPPPLSRRRITEPLSVGVRAIDGFLTLGRGQRVGIMAGSGVGKSTLLGMIARNTE 185
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
AD++VIALIGERGREV +FIE DLG +GLK SV+V ATSDQ AL RI+GA TATAIAE+F
Sbjct: 186 ADISVIALIGERGREVREFIERDLGEDGLKRSVVVVATSDQPALVRIKGAMTATAIAEFF 245
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RDQGKDV L+ DSVTRFAMAQRE+GL +GEPPATRGYTPSVF+ LPKLLERSGT +KGSI
Sbjct: 246 RDQGKDVTLMMDSVTRFAMAQREVGLTVGEPPATRGYTPSVFAMLPKLLERSGTGDKGSI 305
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVL +GDDMNEPI+DAVR ILDGHIVL R+LA + YPA++VL S+SR+ +
Sbjct: 306 TGIYTVLADGDDMNEPIADAVRSILDGHIVLSRDLAAQNHYPAIDVLASVSRVMLDIVDK 365
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
A++++R++L Y E+ED+IN+GAY GS+ ID A+ + FL Q+V + L
Sbjct: 366 EHWQAAQKLRSVLATYHEAEDLINIGAYAAGSNPRIDQAVRLIDGVRRFLRQDVHEMVDL 425
Query: 425 KDTLQKLSDI 434
+TL L D+
Sbjct: 426 TNTLAWLHDL 435
>gi|153938471|ref|YP_001391960.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
Langeland]
gi|152934367|gb|ABS39865.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
Langeland]
Length = 438
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 238/435 (54%), Positives = 302/435 (69%), Gaps = 3/435 (0%)
Query: 1 MVDL-FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAE 59
M+D+ F+K + ET+ G V +V +E EG A VGE+C II ++ + E
Sbjct: 3 MLDIDFEKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFVGEVC-IIYNEKNQTIPCE 61
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPY 119
VVG V LM ++ G+ G VI G+ LSV +LG+V+D L +G+ E
Sbjct: 62 VVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGE-ELM 120
Query: 120 SAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMI 179
Y + + PPD M R+ I+ I TGI+AID + VG GQR+GIFAG+G+GKST LGMI
Sbjct: 121 EGSPYALDSDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
A+ AD+NVIALIGERGREV DFIE DLG EGLK SVIV ATSD+ AL R++GA+TATA
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS 299
IAEYFRDQGK V+L+ DSVTRFAMAQREIGLAIGEPPAT+GYTPSVF+ LP+L+ERSG S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
KGSIT FYTVLV+GDD NEPI+DAVRGILDGHIVL R+LA + YPA++VL S+SRL +
Sbjct: 301 NKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDVLSSVSRLMS 360
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
++ KDA+ R LL Y SED+IN+GAY KGS+ +D AI ++ I FL Q +
Sbjct: 361 EIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQGIG 420
Query: 420 DPAKLKDTLQKLSDI 434
+ +++ L D+
Sbjct: 421 EQHSFEESTSILQDM 435
>gi|15895428|ref|NP_348777.1| Flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
gi|15025152|gb|AAK80117.1|AE007716_6 Flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
Length = 438
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 235/438 (53%), Positives = 308/438 (70%), Gaps = 3/438 (0%)
Query: 1 MVDL-FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAE 59
M+D+ FDK + + E G V +V IE +G A VGE+C II ++ +K E
Sbjct: 1 MIDINFDKVISQIRECKTEYVEGIVNKVVGLTIEVDGIKAFVGEVC-IIYNERNRPIKCE 59
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPY 119
VVG N V LM +++G+ G V+ +G LSV + LLG+V+D L G+ E
Sbjct: 60 VVGFNEGRVILMPLGELEGISPGCRVVQTGIPLSVKCSDELLGKVLDGLGAPLRGE-EVK 118
Query: 120 SAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMI 179
S Y + PPD + R+ I+ I TG+RAID L G GQR+GIFAG+G+GKST LGMI
Sbjct: 119 SGVLYQLDREPPDPLKRRRIKNSIETGVRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMI 178
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
AR ADVNVIALIGERGREVLDFIE DLG EG+K SVIV ATSD+ AL R++GA+TATA
Sbjct: 179 AREAKADVNVIALIGERGREVLDFIEKDLGEEGMKRSVIVCATSDKPALVRLKGAFTATA 238
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS 299
IAEYFRD+GK V+L+ DSVTRFAMAQRE+GLA GEPPAT+GYTPSVF+ LP+L+ERSG +
Sbjct: 239 IAEYFRDKGKKVILMMDSVTRFAMAQREVGLATGEPPATKGYTPSVFAMLPRLMERSGMA 298
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
E GSIT FYTVLV+GDD NEPI+DAVR ILDGHIVL RNLA + YPA++VL S+SRL +
Sbjct: 299 ETGSITAFYTVLVDGDDFNEPIADAVRSILDGHIVLSRNLAAQNHYPAIDVLSSVSRLMS 358
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
++ + K A+ R LL +Y ++ED+IN+GAY KG++ +D AI++ RI +L Q ++
Sbjct: 359 EIADSDHKKAAGLARDLLAEYKKNEDLINIGAYVKGTNNKVDAAINYNDRIISYLKQGIE 418
Query: 420 DPAKLKDTLQKLSDITGI 437
+ + ++++ L + I
Sbjct: 419 EKSSFEESINSLKSMFNI 436
>gi|42524760|ref|NP_970140.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
gi|39576970|emb|CAE78199.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
Length = 442
Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats.
Identities = 226/435 (51%), Positives = 308/435 (70%), Gaps = 9/435 (2%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK----AEV 60
DKY++ + K +G+V V+ LI+ P ASVG + I NP G++ AEV
Sbjct: 8 LDKYSDVIQSVHLTKDSGKVTEVNGMLIKGYLPGASVGSIVSI----NPSGMEKSFLAEV 63
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG V +M+ D++GV +G ++ + +I +V G LLGRVVD L + D K E +
Sbjct: 64 VGFKDKHVLMMALNDMRGVALGSKIVLARQIATVRAGEELLGRVVDGLGRPLDDKGEVEN 123
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ P+ + + + R+PIR+ I GIRAI+ L G GQR+ I AG+G+GKS LLGM+A
Sbjct: 124 FREVPLYSEVRNPLDRRPIREPIDLGIRAINGALTAGLGQRVAIMAGSGVGKSVLLGMMA 183
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNTNADVNVIA+IGERGREV +FIEHDLGPEG+K SV+V TSDQS L R+RGAY ATA+
Sbjct: 184 RNTNADVNVIAMIGERGREVREFIEHDLGPEGMKRSVVVCVTSDQSPLLRMRGAYVATAL 243
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYF QGK+V+L+ DSVTRFAMAQREIGL+ GEPP+ +GYTPSVF++LPKLLER+G+ E
Sbjct: 244 AEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGEPPSQKGYTPSVFATLPKLLERAGSFE 303
Query: 301 -KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
+GSITGFYT LVEGDDMN+PI D+VR I+DGHIVL R+LA++G +PA+++++S SR+
Sbjct: 304 GEGSITGFYTTLVEGDDMNDPIGDSVRSIVDGHIVLSRSLAQKGHFPAIDIMQSASRVMR 363
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
VS P ++++R L Y ++ED+IN+GAY+ GS+ ID A+ ++ DFL Q V+
Sbjct: 364 AVSSPEHSKLAQKLRETLAVYKDAEDLINIGAYKPGSNPKIDRAVKVIDQVNDFLKQRVE 423
Query: 420 DPAKLKDTLQKLSDI 434
DP T++++ I
Sbjct: 424 DPTNFTQTVRQMQQI 438
>gi|150021149|ref|YP_001306503.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
BI429]
gi|149793670|gb|ABR31118.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
BI429]
Length = 434
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 231/433 (53%), Positives = 306/433 (70%), Gaps = 3/433 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVV 61
+D + +SE +P + G V ++ IES+GP A +GELC+IIT+ AEVV
Sbjct: 1 MDRLELLKKRLSEYNPYQKIGAVSKIVGLTIESKGPDAFLGELCKIITEYKKS--YAEVV 58
Query: 62 GLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA 121
G N V LM D+ G+K G VI + + +S+PV LLGRVVDAL + DGK + S
Sbjct: 59 GFNENGVILMPLEDISGLKKGCQVIKTNQYVSIPVSEELLGRVVDALGRPLDGK-KILSK 117
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
++ P+V P+ + RK I I GIRAID L +G GQR+GIFAG+G+GKSTLLGMIAR
Sbjct: 118 EKIPIVREAPNPLIRKRITTPISVGIRAIDGFLTLGYGQRIGIFAGSGVGKSTLLGMIAR 177
Query: 182 NTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIA 241
NT+AD+NVI+LIGERGREV +FIE DL EGLK S++V +TSDQ AL R++ TAT+IA
Sbjct: 178 NTSADINVISLIGERGREVREFIEKDLKKEGLKRSIVVVSTSDQPALLRVKALLTATSIA 237
Query: 242 EYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK 301
EYFRD+G +V+L+ DS+TR+AMAQRE+GLA GEPP TRGY PSVF+ LPK+LER+G S+K
Sbjct: 238 EYFRDKGYNVLLMVDSLTRWAMAQREVGLATGEPPTTRGYPPSVFAGLPKILERAGNSDK 297
Query: 302 GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRV 361
GSITG YTVLVE DD NEPISD VRGI+DGHI+L R LAE YPA++VL S+SRL N +
Sbjct: 298 GSITGIYTVLVEADDFNEPISDTVRGIVDGHIILSRKLAESAHYPAIDVLMSVSRLMNDI 357
Query: 362 SGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDP 421
K ++ +++ L+ Y +++D+I++GAY+KG++ ID +I+ I FL Q +D+
Sbjct: 358 VTKEHKISAMKLKDLIATYYDAKDLIDVGAYKKGTNPKIDKSIELIDEINKFLKQSIDES 417
Query: 422 AKLKDTLQKLSDI 434
DT+Q L I
Sbjct: 418 MSFDDTVQYLISI 430
>gi|148380617|ref|YP_001255158.1| flagellum-specific ATP synthase [Clostridium botulinum A str. ATCC
3502]
gi|148290101|emb|CAL84220.1| flagellum-specific ATP synthase [Clostridium botulinum A str. ATCC
3502]
Length = 438
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 236/435 (54%), Positives = 301/435 (69%), Gaps = 3/435 (0%)
Query: 1 MVDL-FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAE 59
M+D+ F K + ET+ G V +V +E EG A VGE+C II ++ + E
Sbjct: 3 MLDIDFQKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFVGEVC-IIYNEKNQTIPCE 61
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPY 119
VVG V LM ++ G+ G VI G+ LSV +LG+V+D L +G+ E
Sbjct: 62 VVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGE-ELM 120
Query: 120 SAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMI 179
Y + + PPD M R+ I+ I TGI+AID + VG GQR+GIFAG+G+GKST LGMI
Sbjct: 121 EGSPYALDSDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
A+ AD+NVIALIGERGREV DFIE DLG EGLK SVIV ATSD+ AL R++GA+TATA
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS 299
IAEYFRDQGK V+L+ DSVTRFAMAQREIGLAIGEPPAT+GYTPSVF+ LP+L+ERSG S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
KGSIT FYTVLV+GDD NEPI+DAVRGILDGHIVL R+LA + YPA+++L S+SRL +
Sbjct: 301 NKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRLMS 360
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
++ K+A+ R LL Y SED+IN+GAY KGS+ +D AI ++ I FL Q +
Sbjct: 361 EIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQGIS 420
Query: 420 DPAKLKDTLQKLSDI 434
+ +++ L D+
Sbjct: 421 EQHSFEESTSILQDM 435
>gi|153953781|ref|YP_001394546.1| FliI [Clostridium kluyveri DSM 555]
gi|146346662|gb|EDK33198.1| FliI [Clostridium kluyveri DSM 555]
Length = 439
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 230/410 (56%), Positives = 295/410 (71%), Gaps = 2/410 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G V +V IE EG A VGE+C + +++N + + EVVG V LM ++ G+
Sbjct: 23 GIVKKVIGLTIEVEGIKAFVGEVCNVYSEENGN-IACEVVGFKEKDVILMPLGELIGISP 81
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V+ LSV L G+V+D L G+ E S Y + A PPD + RK I+Q
Sbjct: 82 GCRVVPGRRPLSVKCSEELFGKVLDGLGNPL-GEDEISSGVLYELDAEPPDPLKRKRIKQ 140
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
I TGIRAID L G GQR+GIFAG+G+GKST LGMIAR ADVNVIALIGERGREV
Sbjct: 141 VISTGIRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIARYAEADVNVIALIGERGREVR 200
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
DFIE DLG EGLK S+IV ATSD+ AL R++GA+TATAIAEYFRD+GK V+L+ DSVTRF
Sbjct: 201 DFIEKDLGEEGLKKSIIVCATSDKPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRF 260
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQREIGLA+GEPPAT+GYTPSVF+ LP+L+ERSG S+KGSIT FYTVLV+GDD+NEPI
Sbjct: 261 AMAQREIGLAVGEPPATKGYTPSVFAKLPRLMERSGMSDKGSITAFYTVLVDGDDLNEPI 320
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+DAVRGILDGHIVL R+LA + YPA++VL SISRL + ++ + K ++ R +L Y
Sbjct: 321 ADAVRGILDGHIVLSRSLANKNHYPAIDVLSSISRLMSEITEKSHKKSASFARDMLSVYK 380
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
SED+IN+GAY +G++ ID AI++Y I ++L Q +D+ + +++ +L
Sbjct: 381 NSEDLINIGAYIRGNNPNIDMAINYYDGIINYLKQNMDEYSSFDNSINRL 430
>gi|153934199|ref|YP_001384903.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
ATCC 19397]
gi|153936379|ref|YP_001388372.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
Hall]
gi|152930243|gb|ABS35743.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
ATCC 19397]
gi|152932293|gb|ABS37792.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
Hall]
Length = 438
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 235/435 (54%), Positives = 301/435 (69%), Gaps = 3/435 (0%)
Query: 1 MVDL-FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAE 59
M+D+ F K + ET+ G V +V +E EG A VGE+C II ++ + E
Sbjct: 3 MLDIDFQKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFVGEVC-IIYNEKNQTIPCE 61
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPY 119
VVG V LM ++ G+ G VI G+ LSV +LG+V+D L +G+ E
Sbjct: 62 VVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGE-ELM 120
Query: 120 SAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMI 179
Y + + PPD M R+ I+ I TGI+AID + VG GQR+GIFAG+G+GKST LGMI
Sbjct: 121 EGSPYALDSDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
A+ AD+NVIALIGERGREV DFIE DLG EGLK SVIV ATSD+ AL R++GA+TATA
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS 299
IAEYFRDQGK V+L+ DSVTRFAMAQREIGLAIGEPPAT+GYTPSVF+ LP+L+ER+G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERTGMS 300
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
KGSIT FYTVLV+GDD NEPI+DAVRGILDGHIVL R+LA + YPA+++L S+SRL +
Sbjct: 301 NKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRLMS 360
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
++ K+A+ R LL Y SED+IN+GAY KGS+ +D AI ++ I FL Q +
Sbjct: 361 EIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQGIS 420
Query: 420 DPAKLKDTLQKLSDI 434
+ +++ L D+
Sbjct: 421 EQHSFEESTSILQDM 435
>gi|91200226|emb|CAJ73270.1| strongly similar to flagellar ATPase fliI [Candidatus Kuenenia
stuttgartiensis]
Length = 439
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 224/428 (52%), Positives = 304/428 (71%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
F + VSE+ ++ TGRV + +IES GP VGELC I +++ + AEVVG
Sbjct: 8 FALHKKRVSESVLVQRTGRVAHIAGLVIESNGPSVPVGELCYIHSNNGETPIPAEVVGFK 67
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
+ LM +++ + G+ V ASG L+V VG L+GR++ L + DGK +R
Sbjct: 68 EKRILLMPIGELERIGPGNRVTASGSPLTVGVGMGLMGRILGGLGEPMDGKGPLNVEERV 127
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
+ SPPD +TR I++ + TG+RAID +L G+GQRLGIFAG+G+GKSTL+GMIARN+
Sbjct: 128 SIYNSPPDPLTRSRIKEVLETGVRAIDGMLTFGQGQRLGIFAGSGVGKSTLMGMIARNSG 187
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
A+VNVIALIGERGREV +F+E +LG EG+K SVIVS TSD+ AL R++GAY A++IAEYF
Sbjct: 188 AEVNVIALIGERGREVREFVEKNLGEEGMKKSVIVSVTSDKPALLRVKGAYIASSIAEYF 247
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RD+G V+L+ DSVTRFA AQREIGLAIGEPP ++GYTPSVF+ LPKLLERSGT KGSI
Sbjct: 248 RDRGMRVLLMMDSVTRFANAQREIGLAIGEPPTSKGYTPSVFALLPKLLERSGTGTKGSI 307
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLV+GDDMNEPI+DAVRGILDGH+VL R +A + YPA+++++S+SR + +
Sbjct: 308 TGLYTVLVDGDDMNEPIADAVRGILDGHVVLSRAMASQNHYPAIDIMESVSRCMDDIITG 367
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ A++ ++ + Y E+EDMIN+GAY KG + ID A+ I ++L Q++
Sbjct: 368 EHRKAAQMLKAVYATYKEAEDMINIGAYAKGGNKKIDYALSVIDAINEYLKQDMTTNGNF 427
Query: 425 KDTLQKLS 432
+++ KLS
Sbjct: 428 NESISKLS 435
>gi|77918793|ref|YP_356608.1| flagellum-specific ATP synthase FliI [Pelobacter carbinolicus DSM
2380]
gi|77544876|gb|ABA88438.1| flagellum-specific ATP synthase FliI [Pelobacter carbinolicus DSM
2380]
Length = 433
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 224/430 (52%), Positives = 294/430 (68%), Gaps = 1/430 (0%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D+ + PI+ +G++ ++ ++E P A+VG LC+++ D + AEVVG
Sbjct: 2 DRLLACIDNLAPIQVSGKITQIVGLVVEGYCPAATVGTLCELMPRDGGTPVPAEVVGFRD 61
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
+ LM +++G+ G + ++PVG LLGRV+DA+ + D P P P
Sbjct: 62 SRALLMPLGELRGLGPGSRIRVVSNSATLPVGRELLGRVIDAMGQPIDDGPLPVRETDMP 121
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
+ A P M R I + GIRAI+ LL G+GQR+GI AG+G+GKSTLLGMIA+NT A
Sbjct: 122 LYALPAGPMERDTIDTPLDLGIRAINGLLTCGQGQRMGIMAGSGVGKSTLLGMIAQNTQA 181
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DVNVIALIGERGREV +FIE DLGPEGL SV++ ATSDQS L R+RGA+ AT +AEYF
Sbjct: 182 DVNVIALIGERGREVREFIERDLGPEGLARSVVIVATSDQSPLLRMRGAFVATTVAEYFS 241
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSI 304
QG +V+L+ DSVTRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G+ GSI
Sbjct: 242 SQGLNVLLMMDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFATLPKLLERAGSFRNSGSI 301
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLVEGDDMNEPI+DAVR ILDGHIVL R LA + YP +++L S SR+ N V P
Sbjct: 302 TGLYTVLVEGDDMNEPIADAVRSILDGHIVLSRRLAAKNHYPCIDILHSASRVMNAVVDP 361
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+D + R+R +L Y E+ED+IN+GAY+KGS+ ID A+ H + FL Q V + L
Sbjct: 362 GHQDLAGRLREILATYEEAEDLINIGAYKKGSNPKIDTALSHIDNVLRFLRQRVSEAVDL 421
Query: 425 KDTLQKLSDI 434
TL +L+D+
Sbjct: 422 STTLDQLNDL 431
>gi|126697822|ref|YP_001086719.1| flagellum-specific ATP synthase [Clostridium difficile 630]
gi|115249259|emb|CAJ67072.1| flagellum-specific ATP synthase [Clostridium difficile 630]
Length = 439
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 227/430 (52%), Positives = 295/430 (68%), Gaps = 2/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FDK + + GRV ++ +E EG A VGELC I N + EVVG
Sbjct: 10 FDKINKKIENLELTISEGRVKKIIGLTVEVEGIKAFVGELCVIYNQVNKP-VNCEVVGFK 68
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM+ ++ + G VI++G LSV + LLG+V+D L D + RY
Sbjct: 69 DKEVILMALGELTLIAPGCKVISNGIPLSVMCSDNLLGKVLDGLGNPIDNS-DAVLGDRY 127
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
+ PPD M RK IR + TG+RAID+ G GQR+GIFAG+G+GKST LGMIARN
Sbjct: 128 NLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAK 187
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGREVLDFI+ DLG EG+K SV+V ATSD++ L R++GA TATAIAEYF
Sbjct: 188 ADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYF 247
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RDQGK V+L+ DSVTRFAMAQRE+G+AIGEPPA +GYTPSVF+ LPKL+ER+GTS+KGSI
Sbjct: 248 RDQGKKVILMMDSVTRFAMAQREVGVAIGEPPAQKGYTPSVFAMLPKLMERTGTSDKGSI 307
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVLV+GDD NEPI+D RGILDGHIVL R+LA + YP+++VL S+SRL N ++
Sbjct: 308 TAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASK 367
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ R +L +Y E+ED+IN+GAY G++ ID+AI ++ I +FL Q +++ +
Sbjct: 368 EDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSSF 427
Query: 425 KDTLQKLSDI 434
+T+ L +
Sbjct: 428 NETISSLRRV 437
>gi|145956182|ref|ZP_01805179.1| hypothetical protein CdifQ_04000284 [Clostridium difficile
QCD-32g58]
Length = 439
Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats.
Identities = 228/430 (53%), Positives = 294/430 (68%), Gaps = 2/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FDK + + GRV ++ +E EG A VGELC I N + EVVG
Sbjct: 10 FDKINKKIENLELTISEGRVKKIIGLTVEVEGIKAFVGELCVIYNQVNKP-VNCEVVGFK 68
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
V LM+ ++ + G VI+ G LSV + LLG+V+D L D + RY
Sbjct: 69 DKEVILMALGELTLIAPGCKVISKGIPLSVMCSDNLLGKVLDGLGNPIDNS-DAVLGDRY 127
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
+ PPD M RK IR + TG+RAID+ G GQR+GIFAG+G+GKST LGMIARN
Sbjct: 128 NLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAK 187
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGREVLDFI+ DLG EG+K SV+V ATSD++ L R++GA TATAIAEYF
Sbjct: 188 ADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYF 247
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RDQGK V+L+ DSVTRFAMAQRE+G+AIGEPPA +GYTPSVF+ LPKL+ER+GTS+KGSI
Sbjct: 248 RDQGKKVILMMDSVTRFAMAQREVGIAIGEPPAQKGYTPSVFAILPKLMERTGTSDKGSI 307
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVLV+GDD NEPI+D RGILDGHIVL R+LA + YP+++VL S+SRL N ++
Sbjct: 308 TAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASK 367
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ R +L +Y E+ED+IN+GAY G++ ID+AI ++ I +FL Q +++ +
Sbjct: 368 EDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSSF 427
Query: 425 KDTLQKLSDI 434
+T+ L I
Sbjct: 428 NETISSLRRI 437
>gi|67941452|ref|ZP_00533589.1| ATPase FliI/YscN [Chlorobium phaeobacteroides BS1]
gi|67912333|gb|EAM62046.1| ATPase FliI/YscN [Chlorobium phaeobacteroides BS1]
Length = 440
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 228/435 (52%), Positives = 305/435 (70%), Gaps = 5/435 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M DL ++ V +P+K +G+V+++ ++E P A+VG LCQ+I + + + AEV
Sbjct: 1 MKDLVER----VKAVNPLKVSGKVIQIVGLVVEGYCPSATVGTLCQLIPLGSGEPVPAEV 56
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG + LM +++G+ G L+ + S+PVG+ LLGR++DAL + D +P
Sbjct: 57 VGFRDSRALLMPLGELRGLGPGSLIQVVRDSASLPVGDHLLGRILDALGQPLDERPLEPC 116
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
P+ A P M RKPI + G++AI+ LL G GQR+GI AG+G+GKS LLGM+A
Sbjct: 117 EYECPLYALPASPMARKPIVHPLDLGVQAINGLLTCGSGQRMGIMAGSGVGKSVLLGMMA 176
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
++T ADVNVIALIGERGREV +FIE DLGPEGL SV+++ATSDQS L R+RGA+ AT I
Sbjct: 177 KHTQADVNVIALIGERGREVREFIERDLGPEGLARSVVITATSDQSPLLRMRGAFVATTI 236
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYF QGK+V+LL DSVTRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G+ +
Sbjct: 237 AEYFCAQGKNVLLLMDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFATLPKLLERAGSFK 296
Query: 301 -KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
KGSITG YTVLVEGDDMNEPI+DAVR ILDGHIVL R+LA R YP++++L S SR+
Sbjct: 297 GKGSITGLYTVLVEGDDMNEPIADAVRSILDGHIVLSRDLAARNHYPSIDILNSASRVMR 356
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
+ S R+R +L Y E+ED+IN+GAY +GS+ ID AI I +FL Q +D
Sbjct: 357 DIVSSEHMQLSGRVREILATYKEAEDLINIGAYIEGSNGKIDYAISQIEAIIEFLRQGMD 416
Query: 420 DPAKLKDTLQKLSDI 434
D L+ T+ +L+ +
Sbjct: 417 DAVDLQTTVDELTTL 431
>gi|118726781|ref|ZP_01575399.1| flagellar protein export ATPase FliI [Clostridium cellulolyticum
H10]
gi|118663851|gb|EAV70494.1| flagellar protein export ATPase FliI [Clostridium cellulolyticum
H10]
Length = 437
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 227/420 (54%), Positives = 294/420 (70%), Gaps = 1/420 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
KY A+ + I + G+V +V IES+GP S+G+LC I LKAEVVG
Sbjct: 8 KYREALKSKEYIDYIGKVSKVVGLTIESDGPQVSIGDLCNIHIIGGSK-LKAEVVGFKDE 66
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
V LM ++ G+ G V A+G+IL V VG L+GRV+D L D K S Y
Sbjct: 67 KVLLMPLGEMTGIGPGSTVSANGDILKVAVGPQLVGRVLDGLGNPIDDKGSLQSKHYYKT 126
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
PP+ +TRK I + + G+RAID LL +G+GQR+GIFAG+G+GKSTL+GM+ARNT AD
Sbjct: 127 DNKPPNPLTRKRISEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKAD 186
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
+NVIALIGERGREV +F+E DL EGL SV+V ATSDQ AL R++GA ATAIAEYFRD
Sbjct: 187 INVIALIGERGREVREFLERDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRD 246
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
GKDV+LL DS+TR+AMAQRE+GL+IGEPP +RGYTPSVFS PKLLER+GTS+KGSITG
Sbjct: 247 CGKDVLLLMDSLTRYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTSDKGSITG 306
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLV+GDD+ EP++D RGILDGHIVL R++A + YPA++VL S+SR+ +
Sbjct: 307 LYTVLVDGDDLTEPVTDTARGILDGHIVLSRSMANKNHYPAIDVLASVSRVMGDIIDKEH 366
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
K ++ ++ ++ + +SED+IN+GAY KGS+ ID AI+ I FL QE D+ +D
Sbjct: 367 KKSANEIKKVMAVHRDSEDLINIGAYVKGSNEKIDYAIECIEDITSFLQQETDEKVSFED 426
>gi|154249443|ref|YP_001410268.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
Rt17-B1]
gi|154153379|gb|ABS60611.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
Rt17-B1]
Length = 443
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 227/425 (53%), Positives = 300/425 (70%), Gaps = 3/425 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+ V + +P ++ G V ++ IES GP A++GELC+I+ N L AEVVG +
Sbjct: 18 DKVKKLNPYEYAGEVQKIIGLTIESRGPDAALGELCKILVG-NKKAL-AEVVGFKEDLTI 75
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
LM DV G+K G V+ +G +SVPVG L GRV+DAL + DGK R +V+
Sbjct: 76 LMPLEDVTGLKKGCEVLKTGRTVSVPVGEELKGRVIDALGRPIDGKRLVLKEYR-QIVSE 134
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P+ + RK I + + G+RAID L +G+GQR+GIFAG+G+GKSTLLGMIARNT AD+NV
Sbjct: 135 APNPLIRKRILEPLPVGVRAIDGFLTLGKGQRIGIFAGSGVGKSTLLGMIARNTTADINV 194
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
IALIGERGREV +FIE DLG EG+K SV+V +TSDQ AL RI+ TAT IAEYFRD+G
Sbjct: 195 IALIGERGREVREFIEKDLGEEGIKRSVVVVSTSDQPALLRIKALLTATTIAEYFRDKGY 254
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
VML+ DS+TR+AMAQRE+GLAIGEPP TRGY PSVF+ LPK+LER+G S+KGSITG YT
Sbjct: 255 AVMLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVFAQLPKILERAGNSDKGSITGIYT 314
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVE DD NEPISD VRGI+DGHI+L R LAE +PA++VL SISRL ++ P +
Sbjct: 315 VLVEADDFNEPISDTVRGIVDGHIILSRKLAESNHFPAIDVLMSISRLMVDITKPEHIQS 374
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
++ +R ++ Y +++D+I++GAY+KG++ ID +I+ I FL Q + + +DT+
Sbjct: 375 ARAIRDIIATYNDAKDLIDVGAYKKGANPKIDKSIELIDEINKFLRQGIKEKMSFQDTVD 434
Query: 430 KLSDI 434
L I
Sbjct: 435 YLISI 439
>gi|106885112|ref|ZP_01352477.1| ATPase FliI/YscN [Clostridium phytofermentans ISDg]
gi|106767462|gb|EAT24176.1| ATPase FliI/YscN [Clostridium phytofermentans ISDg]
Length = 434
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 231/434 (53%), Positives = 312/434 (71%), Gaps = 3/434 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M+D F+KY + ++ + G+V +V +ES GP ASV +LC+II+ D +KAEV
Sbjct: 1 MID-FNKYEELLMKSYANRL-GKVTKVVGLTVESIGPDASVNDLCEIISQDKSIVVKAEV 58
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G + LM Y D+ G+ +G +V+ E L V VG+ LLG+ +D L D S
Sbjct: 59 IGFRDDKLLLMPYDDITGIGVGSMVLNKKEPLLVKVGDELLGQTLDGLGNPMDMSTLSLS 118
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ YPV A PD M R+ I + + G+RA+D LL +G+GQR+GIFAG+G+GKSTLLGM A
Sbjct: 119 -ESYPVDAKAPDPMDRELIGEVLSLGVRAVDGLLTIGKGQRIGIFAGSGVGKSTLLGMFA 177
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNT AD+NVIALIGERGREV +FIE DLGPEG+K SV+V ATSD+ AL R + A TATAI
Sbjct: 178 RNTKADINVIALIGERGREVKEFIERDLGPEGVKRSVLVIATSDKPALIRKKAAKTATAI 237
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRD+GKDV+L+ DS+TRF+MAQREIGLA GEPP +RGY PSV+S +PKLLER+G S+
Sbjct: 238 AEYFRDKGKDVLLMMDSLTRFSMAQREIGLASGEPPVSRGYPPSVYSEMPKLLERAGNSD 297
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KGSITG YTVLV+GDD NEPI+D RGILDGHIVL R +A++ YPA++VL SISR+ +
Sbjct: 298 KGSITGLYTVLVDGDDFNEPITDTARGILDGHIVLSRKMAQKNHYPAIDVLASISRVMSA 357
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
++ K + +++ +L Y ++ED+IN+GAY+ G++ ID ++ ++ +FL Q+VDD
Sbjct: 358 IATSEHKKLAGKLKMVLATYQDAEDLINIGAYKPGTNKNIDYSMRKIEQVNEFLCQQVDD 417
Query: 421 PAKLKDTLQKLSDI 434
A +DT+ KL I
Sbjct: 418 KADFEDTIHKLESI 431
>gi|39995521|ref|NP_951472.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
gi|39982284|gb|AAR33745.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
Length = 441
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 229/430 (53%), Positives = 298/430 (69%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
+Y +AV PI+F G+V +V +IE P A+VG LC + +D D + AEVVG
Sbjct: 6 LSRYLSAVDAMKPIRFHGKVTQVVGLVIEGFCPDAAVGTLCLVHPNDG-DPIPAEVVGFR 64
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
LM +++GV +G L+ + S+ VG LLGRV+D L D K + Y
Sbjct: 65 DNKTLLMPLGELRGVGLGSLISVKRKKASLGVGPGLLGRVIDGLGVPIDDKGPLAIREEY 124
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A+P + M R+PIRQ + GIRAI++LL G GQR+GI AG+G+GKSTLLGMIAR T
Sbjct: 125 PIYANPVNPMKRRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTLLGMIARYTE 184
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGRE+ +FIE DL EGLK SV+V ATSDQ L R+RGAY AT IAEYF
Sbjct: 185 ADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYF 244
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
+ QGK V+L+ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G+ GSI
Sbjct: 245 QAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGSFLDGSI 304
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLVEGDD NEPISDA+R ILDGHIVL+R LA R YP +++L S SR+ N V+
Sbjct: 305 TGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARAIYPPLDILASASRVMNDVTER 364
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ + + R + LL Y ++ED+IN+GAY+ GS+ ID AI + +F+ Q + D +
Sbjct: 365 SQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTIDYAIAKMDGMINFIRQGIHDGVSM 424
Query: 425 KDTLQKLSDI 434
+ ++ +L+DI
Sbjct: 425 EQSIAELADI 434
>gi|118581829|ref|YP_903079.1| flagellar protein export ATPase FliI [Pelobacter propionicus DSM
2379]
gi|118504539|gb|ABL01022.1| flagellar protein export ATPase FliI [Pelobacter propionicus DSM
2379]
Length = 439
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 226/425 (53%), Positives = 292/425 (68%), Gaps = 1/425 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
KY AV PI+ G+V +V +IE P SVG +C+I + + AEVVG
Sbjct: 10 KYRFAVENATPIRLNGKVTQVVGLVIEGYCPDTSVGAICEI-RPQVGEPIPAEVVGFRNN 68
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
LM +++GV + L+ E S+ VG ++LGRV+D L D + + + YP+
Sbjct: 69 KTLLMPLGELRGVGLDSLISIRREQASMGVGPLMLGRVIDGLGNPIDDRGPLHVEEEYPI 128
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
A+P + MTR PIR+ + GIR+I+ LL G+GQR+GI AG+G+GKSTLLGMIAR T AD
Sbjct: 129 YATPVNPMTRPPIRKPLDLGIRSINGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEAD 188
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
VNVIALIGERGRE+ +FIE DL GLK SV+V ATSDQ L R+RGAY AT IAEYF+
Sbjct: 189 VNVIALIGERGRELREFIEKDLQEIGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQK 248
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
QGK V+L+ DSVTRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G GSITG
Sbjct: 249 QGKKVLLMMDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAGNFTDGSITG 308
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLVEGDD NEPISDAVR ILDGHIVL RNLA R YP +++L S SR+ N V+ +
Sbjct: 309 LYTVLVEGDDFNEPISDAVRSILDGHIVLTRNLASRNIYPPIDILASASRVMNDVTVTDH 368
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
++ + + + Y +SED+IN+GAY+ GS+ ID AI + +L Q V DPA L++
Sbjct: 369 QELVGKFKEAMATYRQSEDLINIGAYKSGSNPGIDYAISKMDGMTAYLKQAVRDPANLQE 428
Query: 427 TLQKL 431
+++ L
Sbjct: 429 SVESL 433
>gi|153892990|ref|ZP_02013808.1| flagellar protein export ATPase FliI [Opitutaceae bacterium TAV2]
gi|151580943|gb|EDN44678.1| flagellar protein export ATPase FliI [Opitutaceae bacterium TAV2]
Length = 461
Score = 414 bits (1063), Expect = e-114, Method: Composition-based stats.
Identities = 230/434 (52%), Positives = 299/434 (68%), Gaps = 4/434 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
D V ++ GRV V +IESEGP +G++C I ++ + + AEVVG
Sbjct: 21 LDALRTQVRHAPAMRRLGRVAAVTGLIIESEGPNVGLGDICVIRSERDAFEVMAEVVGFR 80
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPV-GNILLGRVVDALCKSADGKPEPYSAKR 123
G V LM + G+ G +++G+ +PV G LLGRV+DAL + DG P +R
Sbjct: 81 GERVLLMPLGETTGLHAG-CSVSAGDRPPIPVSGAQLLGRVLDALGRPFDGA-GPVPTRR 138
Query: 124 YPVVAS-PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
V S PP + R+ IR+ + TG+RA+D+ +GRGQRLG+FAG+G+GKSTLLGMIAR
Sbjct: 139 VDAVHSRPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTLLGMIARG 198
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
+ ADV VI L+GERGREV +F+E DLG EGL SV+V ATSD A R+R A+TATAIAE
Sbjct: 199 SAADVVVIGLVGERGREVREFLEKDLGAEGLARSVVVVATSDSPAPLRLRAAFTATAIAE 258
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKG 302
+RDQGK+V+LL DSVTRFAMAQREIGLAIGEPPATRGYTPSVF+ LP+LLER+G E G
Sbjct: 259 SYRDQGKNVLLLMDSVTRFAMAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGAGETG 318
Query: 303 SITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVS 362
+IT YTVLVEGDDMNEPI+DAVRGILDGH+VL R LA YPA++VL+S+SRL+ +
Sbjct: 319 AITALYTVLVEGDDMNEPIADAVRGILDGHLVLSRALAHANHYPAIDVLESVSRLTRDIC 378
Query: 363 GPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPA 422
+++ R R LL Y +ED+I +GAYQKG+SAA+D A+ + + FL Q VD+
Sbjct: 379 SATEVESAARARELLAIYKRNEDLITIGAYQKGASAALDRAVTLHEPLKQFLRQRVDEIV 438
Query: 423 KLKDTLQKLSDITG 436
D +L+++ G
Sbjct: 439 ARADVFNRLAEVMG 452
>gi|78224301|ref|YP_386048.1| ATPase FliI/YscN [Geobacter metallireducens GS-15]
gi|78195556|gb|ABB33323.1| ATPase FliI/YscN [Geobacter metallireducens GS-15]
Length = 443
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 225/430 (52%), Positives = 292/430 (67%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
+Y AV PI+F G+V +V +IE P A+VG LC + D D + AEVVG
Sbjct: 8 LSRYLTAVETMTPIRFHGKVTQVVGLVIEGYCPDAAVGTLCHVHPHDG-DPIPAEVVGFR 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
LM +++GV +G L+ + S+ VG LLGRV+D L + D K + + Y
Sbjct: 67 DNKTLLMPLGELRGVGLGSLISVKRKKSSLGVGPGLLGRVIDGLGEPIDDKGPLATREEY 126
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A+P + M R+PIR+ + GIRAI+ LL G+GQR+GI AG+G+GKSTLLGMIAR T
Sbjct: 127 PIYANPVNPMKRRPIREPLDLGIRAINGLLTCGKGQRVGIMAGSGVGKSTLLGMIARYTE 186
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGRE+ +FIE DL EGLK SV+V ATSDQ L R+RGAY AT IAEYF
Sbjct: 187 ADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYF 246
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
+ QGK V+L+ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G GSI
Sbjct: 247 QAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFMDGSI 306
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLVEGDD NEP+SDA+R ILDGHIVL+R LA R YP ++VL S SR+ V+
Sbjct: 307 TGLYTVLVEGDDFNEPVSDAMRSILDGHIVLNRELAARAIYPPIDVLASASRVMMDVTER 366
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ + R + LL + ++ED+IN+GAY+ GS+ ID AI + ++ Q + D +
Sbjct: 367 GQQQFASRFKELLAAHKQAEDLINIGAYKPGSNPTIDYAISKMEGMVGYIRQGIHDGVTM 426
Query: 425 KDTLQKLSDI 434
+ ++ L DI
Sbjct: 427 EQSVTALGDI 436
>gi|51894136|ref|YP_076827.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
14863]
gi|51857825|dbj|BAD41983.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
14863]
Length = 436
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 224/433 (51%), Positives = 295/433 (68%), Gaps = 3/433 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
K AV + + GRV +IES GP A + ELC + D + AEVVG
Sbjct: 5 KLRRAVEHVELLPVVGRVTGAAGLIIESAGPRAKMNELCWLQGDGRR--VPAEVVGFRED 62
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
+ LM + G++ G VIA+G L PVG LLGRV+D L D K P+
Sbjct: 63 RLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFRPI 122
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
+ PD + R+ I + + G+RA+D+L+ VG GQR+GIFAG+G+GKSTLLGM+AR T AD
Sbjct: 123 LGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTLLGMVARATAAD 182
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
NVIAL+GERGREV +FIE DLG EGL+ SV+V ATS+Q +L RIR A ATAIAEYFRD
Sbjct: 183 CNVIALVGERGREVREFIEKDLGEEGLRRSVVVVATSEQPSLVRIRAALMATAIAEYFRD 242
Query: 247 -QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
G DV+L+ DSVTR A AQRE+GLA+GEPPATRGYTPSVF+ LP++LERSGT GS+T
Sbjct: 243 AHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFAMLPRVLERSGTGPAGSVT 302
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
G YTVLV+GDDMNEP++DAVR ILDGH+VL R LA G YPA++ L+S+SR+ V+ P
Sbjct: 303 GVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHYPAIDPLQSVSRVMPDVTTPE 362
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ ++R+R LL Y E+ED+I +GAYQ+G++ +D+A+ +I FL Q D P+ ++
Sbjct: 363 HRKQAQRLRALLSAYQEAEDLIQIGAYQQGTNPLVDEALAKMDQIKRFLIQPADQPSTME 422
Query: 426 DTLQKLSDITGID 438
+ L+ L+ + G D
Sbjct: 423 EALRGLAALCGED 435
>gi|110599282|ref|ZP_01387522.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
gi|110550037|gb|EAT63223.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
Length = 443
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 223/430 (51%), Positives = 289/430 (67%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
++ AV PIK G+V +V +IE P +VG LC+I + + AEVVG
Sbjct: 8 LSRFLPAVESARPIKLHGKVTQVVGLVIEGFCPETAVGTLCEI-NSQGSESIPAEVVGFR 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
LM +++GV +G L+ E S+ VG LLGRV+D L D + + + Y
Sbjct: 67 ENKTLLMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGAPIDDRGPIITGEEY 126
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A+P + M R+PIRQ + GIRAI+ LL G GQR+GI AG+G+GKSTLLGMIAR T
Sbjct: 127 PIYATPVNPMKRRPIRQPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTE 186
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGRE+ +FIE DL EGLK SV+V ATSDQ L R+RGAY AT IAEYF
Sbjct: 187 ADVNVIALIGERGRELREFIEKDLQAEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYF 246
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
+ QGK V+L+ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G + GSI
Sbjct: 247 QAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFQNGSI 306
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLVEGDD NEPISDA+R ILDGHIVL R LA R YP ++VL S SR+ V+
Sbjct: 307 TGLYTVLVEGDDFNEPISDAMRSILDGHIVLSRELAARNIYPPIDVLNSASRVMMDVTAK 366
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
N + + + +L Y ++ED+IN+GAY+ GS+ ID A+ + +L Q++ D +
Sbjct: 367 NHQKLAGNFKGVLATYRQAEDLINIGAYKPGSNPGIDYALAKIEHMNAYLKQDIKDGVGV 426
Query: 425 KDTLQKLSDI 434
++ + +L I
Sbjct: 427 ENAVMELEAI 436
>gi|117923588|ref|YP_864205.1| flagellar protein export ATPase FliI [Magnetococcus sp. MC-1]
gi|117607344|gb|ABK42799.1| flagellar protein export ATPase FliI [Magnetococcus sp. MC-1]
Length = 449
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 219/414 (52%), Positives = 291/414 (70%), Gaps = 2/414 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G V +V LIE GP S+G++C ++ + N + +KAEVVG V LM ++G+
Sbjct: 35 GWVKKVVGLLIEGNGPAVSIGQMCDVVRE-NGEVVKAEVVGFRDKSVLLMPLGSIKGIFP 93
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +I+ G VPVG LLGRV+ + ++ DG P+ P+ A+P + M R+ I +
Sbjct: 94 GSRIISQGRAEQVPVGPQLLGRVIGPMGEALDGHALPHLDDHVPLHAAPINPMLRRKIEE 153
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RA++SLL VGRGQRLGIFAGTG+GKSTLLGM+AR T AD+NVIALIGERGREV+
Sbjct: 154 PLDLGVRAVNSLLTVGRGQRLGIFAGTGVGKSTLLGMMARYTAADINVIALIGERGREVV 213
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE +LGPEG+ S+++ ATSDQ L R+R AY ATAIAE+FR Q KDV+LL DS+TRF
Sbjct: 214 EFIEDELGPEGMARSIVIVATSDQPPLLRLRAAYMATAIAEFFRAQQKDVLLLMDSITRF 273
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE-KGSITGFYTVLVEGDDMNEP 320
AMAQRE+GLA GEPP +RGY PS F LP+LLER G + +GSIT YTVL+EGDD+ +P
Sbjct: 274 AMAQREVGLATGEPPTSRGYPPSTFMLLPRLLERGGRDQGRGSITSIYTVLMEGDDIQDP 333
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
I DAVRGILDGHIVL R+LA YPA++V S+SRL +S K A+ ++R +L Y
Sbjct: 334 IVDAVRGILDGHIVLSRDLAAANHYPAIDVNGSLSRLMEGLSEKAHKRAAGQLREILATY 393
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++EDMIN+GAY GS+ ID AI I FL Q V++P+ L++++ +L +
Sbjct: 394 VKAEDMINIGAYVAGSNPRIDRAIRFIEPIRTFLKQSVEEPSTLEESIAQLESL 447
>gi|116619484|ref|YP_821640.1| ATPase, FliI/YscN family [Solibacter usitatus Ellin6076]
gi|116222646|gb|ABJ81355.1| ATPase, FliI/YscN family [Solibacter usitatus Ellin6076]
Length = 449
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 210/424 (49%), Positives = 298/424 (70%), Gaps = 1/424 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTI 67
Y + + +P+++TG+V +V LIES GP ++G+ C++ T + +V+G
Sbjct: 8 YISHLDRVNPLRWTGQVTQVVGLLIESRGPSVAIGDFCEVKTASGRR-IHTQVIGFRDGR 66
Query: 68 VQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVV 127
V M ++ G+++GD + A E V VG LLGRV+D K D P + + Y +
Sbjct: 67 VLSMPLEEIDGLQLGDPLAARSEDARVEVGPGLLGRVIDGFGKPMDTGPAINARESYSLH 126
Query: 128 ASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADV 187
+P + + R+ I Q +VTGIRAID+LL G+GQR+GIF G+G+GKSTLLG ++RN +ADV
Sbjct: 127 GTPTNPLDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTLLGSMSRNNSADV 186
Query: 188 NVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQ 247
VIA+IGER REV F+E++LGPEG K SV+V ATS++ A R+R + + AIAEYFRDQ
Sbjct: 187 TVIAMIGERNREVRGFLENELGPEGRKRSVVVCATSERPAPLRVRACFVSLAIAEYFRDQ 246
Query: 248 GKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGF 307
G +V+L+ DSVTR AMAQREIGLA GEPP+ +GYTPSVF+ LPK+LER+G +GSITGF
Sbjct: 247 GANVLLVMDSVTRLAMAQREIGLAAGEPPSQKGYTPSVFNLLPKVLERAGNFGRGSITGF 306
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
+TVLVEGDD NEPI DAVRGILDGH +L R+L +G YPA+++L S+SRL++ ++ P K
Sbjct: 307 FTVLVEGDDFNEPICDAVRGILDGHFILSRDLGAQGHYPAIDILHSVSRLTSAIATPAQK 366
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
+A++++R L Y ++ED+I LGAY GS+ +D +I P + DFL Q+ + L++T
Sbjct: 367 EAARKIRAALAAYRDAEDLIQLGAYVSGSNPDLDASIHLRPELLDFLRQDHLVVSTLEET 426
Query: 428 LQKL 431
L++L
Sbjct: 427 LRRL 430
>gi|145617500|ref|ZP_01773565.1| flagellar protein export ATPase FliI [Geobacter bemidjiensis Bem]
gi|144946289|gb|EDJ81349.1| flagellar protein export ATPase FliI [Geobacter bemidjiensis Bem]
Length = 434
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 220/434 (50%), Positives = 295/434 (67%), Gaps = 2/434 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M++L +Y V P++F G+V +V +IE P +VG +C++ ++ + + AEV
Sbjct: 1 MINL-SRYMPVVEGAKPVRFHGKVTQVVGLVIEGYCPETAVGSVCEVHSEGHAP-IPAEV 58
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG LM +++GV +G ++ E ++ VG LLGRV+D L + D K
Sbjct: 59 VGFRENKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDGLGQPIDDKGPIEV 118
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
A YP+ A P + M R+PIR+ + GIRAI+ LL G GQR+GI AG+G+GKSTLLGMIA
Sbjct: 119 ADEYPIYALPVNPMKRRPIRKPLNLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIA 178
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R T ADVNVIALIGERGRE+ +FIE DL EGL+ SV+V ATSDQ L R+RGAY AT I
Sbjct: 179 RYTEADVNVIALIGERGRELREFIEKDLQKEGLRKSVVVVATSDQPPLVRMRGAYIATTI 238
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYF+ QGK V+L+ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LP+LLER+G +
Sbjct: 239 AEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPRLLERTGNFQ 298
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSITG YTVLVEGDD NEPISDA+R ILDGHI+L R LA R YP ++++ S SR+ +
Sbjct: 299 GGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRELAARNIYPPIDLMNSASRVMSD 358
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V+ K + R + LL Y ++EDMIN+GAY+ GS+ ID A+ ++ +L Q+V D
Sbjct: 359 VATKEHKALAGRFKELLATYRQAEDMINIGAYKSGSNPKIDYAVAKMEQMIGYLKQDVGD 418
Query: 421 PAKLKDTLQKLSDI 434
++++ L I
Sbjct: 419 EVNFEESIAALERI 432
>gi|111115113|ref|YP_709731.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
gi|110890387|gb|ABH01555.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
Length = 436
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 208/435 (47%), Positives = 298/435 (68%), Gaps = 5/435 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M + F+ Y V + + + F GRV ++ L+ES GP +VG+LC +I N + AEV
Sbjct: 1 MSNFFENYLRQVGDIETVAFVGRVQKIKGLLVESLGPQCAVGDLC-LIDQRNNKKVCAEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G NG V LM+Y G+++G+ V + + L + + + LLGRV+D+L + D K +
Sbjct: 60 LGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLN 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
K ++ + ++R ++I+TG++ +D L V +GQR+GIF+G G+GKSTLLGMIA
Sbjct: 120 NKYKELIFEKINPISRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLLGMIA 179
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
+N+NADVNVIA IGERGRE+ +FIEH+LG E LK SV+V +TSD+S ++R +GAY AT I
Sbjct: 180 KNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMI 239
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG-TS 299
AEYFRDQGKDV LLFDS+TRFA A+RE+ L++GEPP +GY PSVF +P LLERSG
Sbjct: 240 AEYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNG 299
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
GS+TGFYTVLVEGDD EP++D ++ +LDGH++LDR+L +RG YP++N+L S SR +
Sbjct: 300 NGGSVTGFYTVLVEGDDFAEPVADNIKAVLDGHVILDRDLFDRGIYPSINILSSTSRSIH 359
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
R+ + + R LL Y + ED+I G Y KGS+ +D AI YP+I DF++Q ++
Sbjct: 360 RIMSLEKQKLIMKARNLLSVYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIIDFISQGIN 419
Query: 420 ---DPAKLKDTLQKL 431
D L+D ++K+
Sbjct: 420 ETFDFENLEDEIRKI 434
>gi|148266220|ref|YP_001232926.1| flagellar protein export ATPase FliI [Geobacter uraniumreducens
Rf4]
gi|146399720|gb|ABQ28353.1| flagellar protein export ATPase FliI [Geobacter uraniumreducens
Rf4]
Length = 443
Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats.
Identities = 221/430 (51%), Positives = 288/430 (66%), Gaps = 1/430 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
++ +AV PI+ G+V +V +IE P +VG LC+I D + AEVVG
Sbjct: 8 LSRFMHAVEAVKPIRLHGKVTQVVGLVIEGFCPETAVGTLCEI-NSHGSDPIPAEVVGFR 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
LM +++GV +G L+ E S+ VG LLGRV+D L D + + + Y
Sbjct: 67 DNKTLLMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGSPIDDRGAIITGEEY 126
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A P + M R+PIR+ + GIRAI+ LL G GQR+GI AG+G+GKSTLLGMIAR T
Sbjct: 127 PIYAMPVNPMKRRPIREPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTE 186
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIALIGERGRE+ +FIE DL EGLK SV+V ATSDQ L R+RGAY AT IAEYF
Sbjct: 187 ADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYF 246
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
+ QGK V+L+ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G GSI
Sbjct: 247 QAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAGNFHGGSI 306
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
TG YTVLVEGDD NEP+SDA+R ILDGHI+L R LA R YP ++VL S SR+ V+
Sbjct: 307 TGLYTVLVEGDDFNEPVSDAMRSILDGHIILSRELAARNIYPPIDVLNSASRVMMDVTSR 366
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ + + +L Y ++ED+IN+GAY+ GS+ ID AI + +L Q+V+D ++
Sbjct: 367 EHQKLAGGFKGVLATYRQAEDLINIGAYKPGSNPKIDYAIAKIEHMNSYLKQDVNDGVEV 426
Query: 425 KDTLQKLSDI 434
+ L++I
Sbjct: 427 DAAVASLAEI 436
>gi|51598548|ref|YP_072736.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
gi|51573119|gb|AAU07144.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
Length = 436
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 208/435 (47%), Positives = 295/435 (67%), Gaps = 5/435 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M + F+ Y V + + + F GRV ++ L+ES GP + G+LC +I N + AEV
Sbjct: 1 MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAFGDLC-LIDQRNNKKVFAEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G NG V LM+Y G+++G+ V + + L + + + LLGRV+D+L + D K
Sbjct: 60 LGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLK 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ + + + R ++I+TG++ +D L V +GQR+GIF+G G+GKSTLLGMIA
Sbjct: 120 NRYKELTFEKINPINRSIFEEQILTGVKVLDGFLPVEKGQRVGIFSGAGVGKSTLLGMIA 179
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
+N+NADVNVIA IGERGRE+ +FIEH+LG E LK SV+V +TSD+S ++R +GAY AT I
Sbjct: 180 KNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMI 239
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG-TS 299
AEYFRDQGKDV LLFDS+TRFA A+RE+ L++GEPP ++GY PSVF +P LLERSG
Sbjct: 240 AEYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVSKGYPPSVFVEIPILLERSGFNG 299
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
GS+TGFYTVLVEGDD EP++D ++ +LDGHI+LDR+L +RG YP++N+L S SR N
Sbjct: 300 NGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINILSSTSRSIN 359
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQ--- 416
R+ + + R LL Y + ED+I G Y KGS+ +D AI YP+I DF++Q
Sbjct: 360 RIMNLEKQKLIMKARNLLSIYKDYEDLIRTGIYIKGSNKDVDFAISKYPKIIDFISQGIN 419
Query: 417 EVDDPAKLKDTLQKL 431
E+ D L+D ++++
Sbjct: 420 EIFDFENLEDEIREI 434
>gi|94986982|ref|YP_594915.1| Type III secretion component protein SctN [Lawsonia intracellularis
PHE/MN1-00]
gi|94731231|emb|CAJ54594.1| Type III secretion component protein SctN [Lawsonia intracellularis
PHE/MN1-00]
Length = 438
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 218/421 (51%), Positives = 280/421 (66%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
AV T P++ GRV +V +I + P +GELC++ + L+AEVVG + L
Sbjct: 13 AVQNTSPVEVRGRVEQVIGTIIRAVVPGVKIGELCELRNPWDNWTLQAEVVGFVKHVALL 72
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASP 130
D+QG+ VI +G + ++PVG LLGRV++ L + DGK YPV A P
Sbjct: 73 TPLGDLQGISPSTEVIPTGMVHAIPVGRELLGRVLNGLGEPIDGKAPLRLRTYYPVYADP 132
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P+ M R+ I + I G+R +D +L G GQR+GIFA G GKSTLL I + T ADV ++
Sbjct: 133 PNPMLRRIIEKPISLGLRVLDGILTCGEGQRMGIFAAAGGGKSTLLSSIIKGTTADVCIL 192
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
ALIGERGREV +FIEHDLG EGLK SV+V +TSD+S++ R++ AYTATAIAEYFRDQGK
Sbjct: 193 ALIGERGREVREFIEHDLGAEGLKRSVLVVSTSDRSSMERLKSAYTATAIAEYFRDQGKK 252
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTV 310
V+LL DSVTRF A REIGLA GEPP RG+ PSVFSSLPKL+ER+G S+KGSIT YTV
Sbjct: 253 VLLLMDSVTRFGRALREIGLASGEPPTRRGFPPSVFSSLPKLMERAGNSDKGSITALYTV 312
Query: 311 LVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDAS 370
LVEGDDM EPI+D R ILDGHI+L R LA YPAV+VL S+SR+ N + K+ +
Sbjct: 313 LVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAVDVLASVSRVMNAIVTKEHKENA 372
Query: 371 KRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQK 430
++R L Y E E ++ +G Y+ G+ A DDAI H I FL Q +D+ + + TLQ
Sbjct: 373 GKLRKYLAKYAEVELLVQIGEYKAGNDPAADDAIKHNKGINAFLQQGLDEKSTFEQTLQA 432
Query: 431 L 431
L
Sbjct: 433 L 433
>gi|95929852|ref|ZP_01312593.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
gi|95134148|gb|EAT15806.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
Length = 442
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 211/418 (50%), Positives = 291/418 (69%), Gaps = 1/418 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
++ G+V ++ +IE P ASVG LC++I + + AEVVG + LM +++
Sbjct: 14 LRVWGKVTKIVGLVIEGYCPSASVGTLCEVIPLSGGEPIAAEVVGFRDGLALLMPLGELR 73
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ G L+ ++PVG+ +LGRV+DA+ + DG P P + PV + PP M RK
Sbjct: 74 GLGPGSLIRVLRTSATMPVGDAMLGRVLDAMGHAIDGLPSPVLDQEMPVYSLPPGPMQRK 133
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + G+RAI+ LL GRGQR+GI AG+G+GKS LLG +A+++ +D+NVIALIGERG
Sbjct: 134 KISDPLDLGVRAINGLLTCGRGQRMGIMAGSGVGKSVLLGTMAKHSQSDINVIALIGERG 193
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +FIE DLG EGL SV++ ATSDQS L R+RGA+ AT +AEYF QG +V+L+ DS
Sbjct: 194 REVREFIERDLGEEGLARSVVLVATSDQSPLLRMRGAFVATTLAEYFCQQGHNVLLMMDS 253
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYTVLVEGDD 316
VTRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G+ E+GSITG YTVLVEGDD
Sbjct: 254 VTRFAMAMREVGLAIGEPPTTKGYTPSVFATLPKLLERAGSFKEQGSITGLYTVLVEGDD 313
Query: 317 MNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTL 376
MNEPI+D+VR ILDGHIVL R+LA + YP +++L S SR+ + P ++ ++R +
Sbjct: 314 MNEPIADSVRSILDGHIVLSRDLAAKNHYPCIDILHSASRVMRDIVDPEHVQSAAQIREI 373
Query: 377 LKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
L + E+ED+IN+GAY GS+ ID AI + DFL Q +D+ L T++ ++ +
Sbjct: 374 LATHKEAEDLINIGAYVAGSNPKIDYAISRIDAVNDFLRQGMDERDDLVGTVEAMTKL 431
>gi|118744430|ref|ZP_01592423.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
gi|118682659|gb|EAV89065.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
Length = 439
Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats.
Identities = 221/428 (51%), Positives = 288/428 (67%), Gaps = 1/428 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
+Y AV +PI+ G+V +V +IE P SVG +C+I D + AEVVG
Sbjct: 10 RYLRAVESVNPIRLHGKVTQVVGLVIEGYCPDTSVGAICEIRPKDGVP-IPAEVVGFRDN 68
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
LM D++GV + L+ + ++ VG LLGRV+D L D K + + YP+
Sbjct: 69 KTLLMPLGDLRGVGLDSLIAVRRDKATLRVGPGLLGRVIDGLGNPIDDKGPLHLDEEYPI 128
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
A+P + M R PIR+ + GIR+I+ LL G+GQR+GI AG+G+GKSTLLGMIAR T AD
Sbjct: 129 YAAPVNPMKRPPIRRPLDLGIRSINGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEAD 188
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
VNVIALIGERGRE+ +F+E DL +GL SV+V ATSDQ L R+RGAY AT IAEYF+D
Sbjct: 189 VNVIALIGERGRELREFVEKDLQEQGLHKSVVVVATSDQPPLVRMRGAYLATTIAEYFKD 248
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
QGK V+++ DS TRFAMA RE+GLAIGEPP T+GYTPSVF++LPKLLER+G +GSITG
Sbjct: 249 QGKKVLMMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFPEGSITG 308
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLVEGDD NEPISDA+R ILDGHIVL R+LA R YP ++++ S SR+ V+
Sbjct: 309 LYTVLVEGDDFNEPISDAMRSILDGHIVLSRDLAARNIYPPIDIMASASRVMADVADERH 368
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
+ + + + L Y +SED+IN+GAY+ GS+ ID AI + + Q V DPA L D
Sbjct: 369 RKLAGQFKETLATYRQSEDLINIGAYKAGSNPGIDQAIRKIDAMTAYQKQAVADPATLAD 428
Query: 427 TLQKLSDI 434
++ L I
Sbjct: 429 SVDGLQRI 436
>gi|78355397|ref|YP_386846.1| ATPase FliI/YscN [Desulfovibrio desulfuricans G20]
gi|78217802|gb|ABB37151.1| ATPase FliI/YscN [Desulfovibrio desulfuricans G20]
Length = 440
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 216/415 (52%), Positives = 286/415 (68%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V ++ + E G A +G +C II +D L AEVVG + M Y D++GV+
Sbjct: 20 GKVNKIVGLVAEGCGVKAPLGAVCHIIPEDGSAPLPAEVVGFRDGNILFMPYGDMRGVQS 79
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G L+ + PVG +LGR DA DG P A P+ A PP+ ++R I
Sbjct: 80 GSLIRNTSMPPLFPVGESMLGRAFDAFGAPMDGSTMPPVAGHNPIYAQPPNPLSRPRIDD 139
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+R I+SL+ +G+GQR+GI AG+G+GKSTL+GM+AR T+ADVNVIALIGERGREV+
Sbjct: 140 PLDVGVRCINSLITLGKGQRVGIMAGSGVGKSTLMGMMARYTSADVNVIALIGERGREVV 199
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F+E DLGPEG+ SV++ ATSDQS L R+R AY ATA+AE+FRDQGKDV+L+ DSVTRF
Sbjct: 200 EFMEKDLGPEGMARSVLIIATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRF 259
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMA RE+GLA+GEPP T+GYTP+VF+ LPKLLER+G + G+ITG YTVLV+GDD NEPI
Sbjct: 260 AMAAREVGLAVGEPPTTKGYTPTVFAQLPKLLERAGRNRHGTITGIYTVLVDGDDFNEPI 319
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+DAVR ILDGHIVL R+LA+ G YPA++VL+SISRL + A + + L +
Sbjct: 320 ADAVRSILDGHIVLTRDLADMGHYPAIDVLRSISRLRTDICPQEVIAAGRTLTRHLATFR 379
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
+ EDMIN+GAY +GS+ ID AI PRI FL Q+V D + ++ ++ G
Sbjct: 380 KVEDMINIGAYAQGSNPDIDQAIGMVPRINQFLQQQVQDKQAIDACYAQMLELAG 434
>gi|15594633|ref|NP_212422.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
gi|1706850|sp|P52607|FLII_BORBU Flagellum-specific ATP synthase
gi|1165272|gb|AAA85611.1| FliI
gi|2688178|gb|AAC66660.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
Length = 436
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 203/435 (46%), Positives = 295/435 (67%), Gaps = 2/435 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M + F+ Y V + + + F GRV ++ L+ES GP ++G+LC +I N + AEV
Sbjct: 1 MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLC-LIDQRNGKKVCAEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G NG V LM+Y G+++G+ V + + L + + + LLGRV+D+L + D K +
Sbjct: 60 LGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLN 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
++ + + R +I+TG++ +D L V +GQR+GIF+G+G+GKSTLLGMIA
Sbjct: 120 NSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIA 179
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
+N+NADVNVIA IGERGRE+ +FIEH+LG E LK SV+V +TSD+S ++R +GAY AT I
Sbjct: 180 KNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMI 239
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG-TS 299
AEYFR+QGKDV LLFDS+TRFA A+RE+ L++GEPP +GY PSVF +P LLERSG
Sbjct: 240 AEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNG 299
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
GS+TGFYTVLVEGDD EP++D ++ +LDGHI+LDR+L +RG YP++NVL S SR +
Sbjct: 300 NGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIH 359
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
R+ + + R LL Y + ED+I G Y KGS+ +D AI YP+I +F++Q ++
Sbjct: 360 RIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQGIN 419
Query: 420 DPAKLKDTLQKLSDI 434
+ ++ ++ +I
Sbjct: 420 ETFDFENLEDEIKEI 434
>gi|51246511|ref|YP_066395.1| flagellum-specific ATP synthase (FliI) [Desulfotalea psychrophila
LSv54]
gi|50877548|emb|CAG37388.1| probable flagellum-specific ATP synthase (FliI) [Desulfotalea
psychrophila LSv54]
Length = 434
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 214/427 (50%), Positives = 291/427 (68%), Gaps = 1/427 (0%)
Query: 9 TNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIV 68
T + + + IK G+V ++ ++E P AS+G LC+I D+ + EVVG V
Sbjct: 5 TQHLKDLNTIKVWGKVTKIVGLVVEGHCPHASIGSLCEISPVDHGSPIFGEVVGFRDGKV 64
Query: 69 QLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVA 128
LM +++G+ G L+ + ++ VG LLGRV+D + D P P ++ + A
Sbjct: 65 LLMPLGELRGLGAGSLIRVIRQSATMRVGPHLLGRVIDGMEVPQDTLPPPELSEEVELYA 124
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PP+ M R I Q I G+RAI+ LL G GQR+GI AG+G+GKS LLGM+A+ AD+N
Sbjct: 125 LPPNPMLRDNICQPIDLGVRAINGLLTCGLGQRMGIMAGSGVGKSVLLGMMAKYAQADIN 184
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
VIALIGERGREV +FIE DLGPEGL SVIV TSDQS L R+RGA+ ATAIAE+F QG
Sbjct: 185 VIALIGERGREVREFIERDLGPEGLARSVIVVVTSDQSPLLRMRGAFVATAIAEFFCKQG 244
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE-KGSITGF 307
K+V+L+ DSVTRFAMA REIGLAIGEPP T+GYTPSVF++LPKLLER+G + +GSITG
Sbjct: 245 KNVLLMMDSVTRFAMAMREIGLAIGEPPTTKGYTPSVFATLPKLLERAGRFKGQGSITGI 304
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
YTVLV+GDDM EP++D+VR ILDGHIVL R +A + +PA+++L S SR+ + P
Sbjct: 305 YTVLVDGDDMTEPVADSVRSILDGHIVLSRAIAAKNHFPAIDILASASRVMRDIVSPEHI 364
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
+ + ++RT+L DY E+ED+IN+GAY KG++ ID AI+ + FL Q + + +T
Sbjct: 365 ELAGKLRTVLADYREAEDLINIGAYVKGTNKNIDLAIEKIEQAKLFLKQGYNQTTDMTET 424
Query: 428 LQKLSDI 434
L++L +
Sbjct: 425 LEQLESL 431
>gi|145621452|ref|ZP_01777421.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
gi|144948089|gb|EDJ83116.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
Length = 442
Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats.
Identities = 213/428 (49%), Positives = 295/428 (68%), Gaps = 4/428 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTI 67
+T+ + + G++ R+ IES GP ++G+LC+I D + AE VG +
Sbjct: 13 FTDKLKNRPLFELEGKISRIVGVTIESIGPSVALGDLCRIKLKDGSK-IFAETVGFSDNK 71
Query: 68 VQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADG-KPEPYSAKRYPV 126
V LM DV G+ +G V ++V + + LLG V+D L +S DG K + Y +K +
Sbjct: 72 VLLMPLEDVSGIYVGAPVERVDSKINVKISSDLLGHVLDGLGRSMDGSKVKSYESKS--I 129
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
S P+ + R I++ + G+RAID+ L +G+GQR+GI AG+G+GKSTLLGMIARNT AD
Sbjct: 130 YRSAPNPLLRNRIKEPLSVGVRAIDAFLTLGKGQRIGIMAGSGVGKSTLLGMIARNTEAD 189
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
+NVI LIGERGREV DFIE DLG EGLK SV++ +TSD AL R++ YTAT IAEYFRD
Sbjct: 190 INVIGLIGERGREVKDFIEKDLGEEGLKKSVLIVSTSDSPALLRVKALYTATTIAEYFRD 249
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
G +V+++ DS+TR+AMAQREIGL+IGEPP TRGYTPSVF+++PK+LER+G S+KGS+T
Sbjct: 250 LGYNVLMMVDSITRWAMAQREIGLSIGEPPTTRGYTPSVFANMPKILERAGNSQKGSMTA 309
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLVE DDMN+PI DAVR I+DGHIVL R+LA+ YP +++L S+SRL V
Sbjct: 310 IYTVLVEADDMNDPIGDAVRSIVDGHIVLSRSLADSSHYPPIDILSSVSRLMKEVVDEKH 369
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
A+ +R + Y S+D+I +GAY+KGS+ +D A++ I +FLTQ +++ A +
Sbjct: 370 LKAAMFIRDIYASYMNSKDLIEVGAYKKGSNKKVDIALEEIENINNFLTQRIEEKAPFEQ 429
Query: 427 TLQKLSDI 434
TL+KL +I
Sbjct: 430 TLKKLVEI 437
>gi|1196321|gb|AAB51413.1| flagellar export apparatus [Borrelia burgdorferi]
Length = 436
Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats.
Identities = 201/435 (46%), Positives = 293/435 (67%), Gaps = 2/435 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M + F+ Y V + + + F GRV ++ L+ES GP ++G+LC +I N + AEV
Sbjct: 1 MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLC-LIDQRNGKKVCAEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G NG V LM+Y G+++G+ V + + L + + + LLGRV+D+L + D K +
Sbjct: 60 LGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLN 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
++ + + R +I+TG++ +D L V +GQR+GIF+G+G+GKSTLLGMIA
Sbjct: 120 NSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIA 179
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
+N+NADVNVIA IGERGRE+ +FIEH+LG E LK SV+V +TSD+S ++R +GAY AT I
Sbjct: 180 KNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMI 239
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG-TS 299
AEYFR+QGKDV FDS+TRFA A+RE+ L++GEPP +GY PSVF +P LLERSG
Sbjct: 240 AEYFREQGKDVAFCFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNG 299
Query: 300 EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
GS+TGFYTVLVEGDD EP++D ++ +LDGHI+LDR+L +RG YP++NVL S SR +
Sbjct: 300 NGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIH 359
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
R+ + + R LL Y + ED+I G Y KGS+ +D AI YP+I +F++Q ++
Sbjct: 360 RIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQGIN 419
Query: 420 DPAKLKDTLQKLSDI 434
+ ++ ++ +I
Sbjct: 420 ETFDFENLEDEIKEI 434
>gi|94264096|ref|ZP_01287895.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
gi|93455512|gb|EAT05702.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
Length = 437
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 215/415 (51%), Positives = 288/415 (69%), Gaps = 1/415 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
I GRV +V +IES+GP VG +C++ + AEVVG V LM +++
Sbjct: 16 ITVGGRVSQVIGMVIESDGPGIPVGSICEVEVFRGRSTVPAEVVGFREGRVLLMPLGEMR 75
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
GV+ G + + V V LLGR++D L + DG P YP+ A P + M R+
Sbjct: 76 GVEPGSAIRLAEGQARVTVSQALLGRIIDGLGQPMDGGPPLPGEAFYPLYAEPLNPMERE 135
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I++ + G+R+I+ LL +G+GQR+GI AG+G+GKSTL+GMIAR+T AD++VIALIGERG
Sbjct: 136 RIQEPVDVGVRSINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAADISVIALIGERG 195
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
RE+ DFIE DLGPEGL SV++ ATSDQ L R+RGAY A A+AEYFRD +DV+L+ DS
Sbjct: 196 RELKDFIERDLGPEGLARSVVIVATSDQPPLVRMRGAYLAMAVAEYFRDHDRDVVLMMDS 255
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE-KGSITGFYTVLVEGDD 316
VTR+AM+ RE+GLAIGEPP +RGYTPSVF LPKLLER+GT + KGSITG +TVLVEGDD
Sbjct: 256 VTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQGKGSITGIFTVLVEGDD 315
Query: 317 MNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTL 376
MNEPI+DAVR I+DGHIVL R+LA +G YPA+ V S+SR + V+ +A+ R +
Sbjct: 316 MNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASAEQIEAAHRFLEI 375
Query: 377 LKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+ Y SED+IN+GAY KGS+ ID+AI ++ +L Q+V+ KD++ +L
Sbjct: 376 ISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQQVEQQVPYKDSVAQL 430
>gi|46562141|ref|YP_009159.1| type III secretion system ATPase [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120586842|ref|YP_961187.1| type III secretion apparatus H+-transporting two-sector ATPase
[Desulfovibrio vulgaris subsp. vulgaris DP4]
gi|46447678|gb|AAS94344.1| type III secretion system ATPase [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120564256|gb|ABM29999.1| type III secretion apparatus H+-transporting two-sector ATPase
[Desulfovibrio vulgaris subsp. vulgaris DP4]
Length = 438
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 216/425 (50%), Positives = 282/425 (66%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
AV+ ++ GRV +V +I + P VGELC + + L+AEVVG + L
Sbjct: 13 AVNSGPSVEVRGRVEQVVGTIIRAVVPGVKVGELCLLRNPWDDWNLRAEVVGFVKHVALL 72
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASP 130
++QG+ VI +GEILS+PVG LLGRV+D L DG P RYPV A P
Sbjct: 73 TPLGNLQGISPATEVIPTGEILSIPVGEDLLGRVLDGLGDPIDGGPPLKPRTRYPVYADP 132
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P+ MTR+ I + I G+R +D +L G GQR+GIFA G GKSTLL I + +ADV V+
Sbjct: 133 PNPMTRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVL 192
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
ALIGERGREV +FIEHDLGPEG K +V+V +TSD+S++ R++ AYTATAIAEYFRDQ +
Sbjct: 193 ALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRS 252
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTV 310
V+L+ DSVTRF AQREIGLA GEPP RG+ PSVFS+LP+L+ER+G S++GSIT YTV
Sbjct: 253 VLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDRGSITALYTV 312
Query: 311 LVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDAS 370
LVEGDDM EPI+D R ILDGHIVL R LA YPA++V S+SR+ N + G K A+
Sbjct: 313 LVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVGKEHKGAA 372
Query: 371 KRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQK 430
+++R +L Y E E ++ +G Y+KGS DDA+ + FL Q +D+ + +TL
Sbjct: 373 QKLRKILAKYAEVELLVQIGEYKKGSDKEADDALARVGAVNAFLRQGLDERSTFDETLAA 432
Query: 431 LSDIT 435
L T
Sbjct: 433 LYKAT 437
>gi|149178726|ref|ZP_01857309.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
gi|148842424|gb|EDL56804.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
Length = 458
Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats.
Identities = 218/460 (47%), Positives = 302/460 (65%), Gaps = 5/460 (1%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
+FD + + + P + TGRV RV G A +G +C I +N ++AEVVG
Sbjct: 1 MFD-VSQQIKQILPFRLTGRVTRVVGLTASVSGFPAPLGSVCAI-DRENGSAVEAEVVGF 58
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
L+ Y D+ G++ GD V + +V VG +LGRV+D + DGK + + R
Sbjct: 59 QNEETLLLPYEDLAGIRRGDRVSLIQSVPAVAVGQGILGRVLDGRGRCIDGKNQAMLSHR 118
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
+ A P + R I + TGIR ID LL G+GQRLGIFAG+G+GKSTL+G +AR +
Sbjct: 119 ANLKAKPISPLNRPRIDSPLSTGIRTIDGLLTCGKGQRLGIFAGSGVGKSTLMGQMARQS 178
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
+AD+NV+ L+GERGREV +F++ DLG EGL+ SV++ ATSD+ AL R+R A+ ATA++E+
Sbjct: 179 SADINVVCLVGERGREVREFLDRDLGSEGLERSVVIVATSDEPALIRLRAAHLATAVSEF 238
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRD GKDV+L+ DSVTR+A+AQREIGLA GEPPATRGY PSVFS LPKLLERSG +E GS
Sbjct: 239 FRDCGKDVLLMMDSVTRYALAQREIGLAAGEPPATRGYPPSVFSLLPKLLERSGRTESGS 298
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
ITGFYTVLVE DD NEPISD VRGILDGHI+L R LA +PA++VL+SISR N ++
Sbjct: 299 ITGFYTVLVEADDANEPISDTVRGILDGHIMLSRKLAHESHWPAIDVLQSISRSMNDITS 358
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
+ + +++ L+ Y +SED+I++GAYQ GS+ +D AI P ++L Q + +
Sbjct: 359 AEHQQSVAQIKKLMAAYQQSEDLISIGAYQAGSNPEVDLAIKMRPLWNEYLKQGNTEDSD 418
Query: 424 LKDTLQKLSDITG--IDIPPEEFDEAGLGVGAIKKYAQSS 461
+ L+++ + P + EAG + A + AQ++
Sbjct: 419 FHTASEGLTNLVARMQQLKPMKASEAG-QIAATDQTAQTT 457
>gi|108762697|ref|YP_630662.1| ATPase, FliI/YscN family [Myxococcus xanthus DK 1622]
gi|108466577|gb|ABF91762.1| ATPase, FliI/YscN family [Myxococcus xanthus DK 1622]
Length = 437
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 213/431 (49%), Positives = 287/431 (66%), Gaps = 3/431 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVV 61
+DL +Y + + E ++ GRV + +I++ P VGEL +I N +KAEVV
Sbjct: 3 IDL-SRYFDLIKEAQVVRVRGRVTELTGLIIKASVPNVRVGELV-LIKSRNRGAVKAEVV 60
Query: 62 GLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA 121
G G V LM ++ G+ VI +G+ LS+ G LLGRV++ + + DG P P
Sbjct: 61 GFQGDEVMLMPLGELHGIGPDSEVIPTGKPLSIKCGEALLGRVLNGIGEPMDGHPLPEEG 120
Query: 122 K-RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ V PD TR+ I + + G+R ID LL VG GQR+G+FAG+G+GKSTL+G IA
Sbjct: 121 LIDWSVDRDCPDPFTRQRIERPLPLGVRCIDGLLTVGEGQRVGLFAGSGVGKSTLMGQIA 180
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
RNT AD+ V+ALIGERGREV +FIE +G EG+K SV+V ATSDQ +L R+R AY ATAI
Sbjct: 181 RNTKADLCVVALIGERGREVREFIEDAMGEEGMKRSVLVCATSDQPSLVRLRAAYVATAI 240
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFR++G +V+ + D+VTR A AQREIGLA+GEPPA +GY PSVFS LP++LER+G SE
Sbjct: 241 AEYFRERGGNVLFMLDTVTRLARAQREIGLAVGEPPARQGYPPSVFSMLPRILERTGNSE 300
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KG T YT LV G DM EPI+D VRGILDGH +L+R L ER Q+PA++VL S+SR+ +
Sbjct: 301 KGKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRALGERNQWPAMDVLASLSRVMSG 360
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ + K A+ R+R LL Y + D+I LGAYQ G+ D AID Y I DFL Q+
Sbjct: 361 IVSKDHKKAAGRLRELLSTYEKQRDLILLGAYQYGTDPRTDQAIDKYDAIIDFLKQDTHS 420
Query: 421 PAKLKDTLQKL 431
+ ++T+++L
Sbjct: 421 NSGFEETVEQL 431
>gi|85858820|ref|YP_461022.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
gi|85721911|gb|ABC76854.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
Length = 455
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 208/420 (49%), Positives = 290/420 (69%), Gaps = 3/420 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVV 61
+DL +Y + + PIK GRV + ++E +GP AS+GE+C ++ D+ + AEVV
Sbjct: 15 IDL-SRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKP-VFAEVV 72
Query: 62 GLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA 121
G V LM +VQG+ G + + G+ +V VG LLGRV+D + D + +
Sbjct: 73 GFKKGKVILMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTE 132
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ YP+ A P + + R I I G++ ++ L + G+GQR+GIFAG+G+GKS L+GMIAR
Sbjct: 133 EEYPLYAEPINPLARGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSGVGKSVLMGMIAR 192
Query: 182 NTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIA 241
NT+AD+NVI LIGERGREV +F+E +LG EGL SV+V A SD L R+R A+ AT ++
Sbjct: 193 NTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLIRMRAAHVATTVS 252
Query: 242 EYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE- 300
EYFRDQG+DV+L+ DS+TRFAMAQREIGL++GEPP T+GYTPSVFS LPKLLER+G E
Sbjct: 253 EYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEG 312
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
+GSITG YT+LVEGDD NEPISDA R ILDGH+ L R LA + YPAV+VL SISR+
Sbjct: 313 RGSITGLYTILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMID 372
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ ++ + R+ +++ + ++E++IN+GAY GS+A ID AI ++ DFL Q++ +
Sbjct: 373 IVSEKHRNMANRILSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHE 432
>gi|46578726|ref|YP_009534.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120603710|ref|YP_968110.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris subsp.
vulgaris DP4]
gi|46448138|gb|AAS94793.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120563939|gb|ABM29683.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris subsp.
vulgaris DP4]
Length = 437
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 216/420 (51%), Positives = 285/420 (67%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+ E P++ G++ +V + E G A +G +C ++ DD + + AEVVG + M
Sbjct: 12 LRECAPMQTFGKITKVVGLVAEGSGIKAPLGAVCHMLPDDGGESVAAEVVGFRDGRLLFM 71
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPP 131
Y +++GV+ G L+ S PVG LLGR DA DG P+ ASPP
Sbjct: 72 PYGELRGVRPGSLIRNSSLPPVFPVGEGLLGRAFDAFGAPLDGGTPVMPEAWAPLYASPP 131
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
+ +TR I + G+R I+SLL +GRGQR+GI AG+G+GKSTL+GM+AR T A VNVI
Sbjct: 132 NPLTRPRIDTPLDVGVRCINSLLTLGRGQRVGIMAGSGVGKSTLMGMMARYTEAQVNVIG 191
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
LIGERGREV++F+E DLGPEG+ SV+V ATSDQS L R+R AY ATA+AE+FRDQGKDV
Sbjct: 192 LIGERGREVVEFMEKDLGPEGMARSVLVVATSDQSPLVRMRAAYAATAVAEFFRDQGKDV 251
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
+L+ DSVTRFAMA RE+GLA+GEPP T+GYTP+VF+ LP+LLER+G S +G+ITG YTVL
Sbjct: 252 LLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPRLLERAGRSPEGTITGIYTVL 311
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
V+GDD NEPI+DAVR ILDGHIVL R LA++G +PA++VLKSISRL + + +A +
Sbjct: 312 VDGDDFNEPIADAVRSILDGHIVLTRELADQGHFPAIDVLKSISRLRTDICPDDIVNAGR 371
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+ + + EDMIN+GAY GS+ ID AI I DFL Q + D L ++L
Sbjct: 372 ILTRHMATFRRVEDMINIGAYATGSNPDIDKAIAMVGPINDFLRQHITDQQPLPGCYEQL 431
>gi|78043388|ref|YP_359843.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995503|gb|ABB14402.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 434
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 217/426 (50%), Positives = 288/426 (67%), Gaps = 5/426 (1%)
Query: 9 TNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIV 68
T + E + +K G V +V +E+ G SVGE +I+ + + AEVVG
Sbjct: 10 TEQIKEHEFLKPWGVVRQVIGLTVEAHGLKVSVGETVEILAGNAR--VLAEVVGFKEENA 67
Query: 69 QLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVA 128
LM ++ G+ +G LV L + VG LLG+V+D L + + + + + +
Sbjct: 68 ILMPLGEINGISLGSLVRPLRRQLQITVGKSLLGKVLDGLGRPLNA--DKIYGRHFSLDR 125
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PP + R+ I++ TGI+AID L G GQRLGIFAG+G+GKSTLLGMIAR ADVN
Sbjct: 126 KPPKPLHRRRIKKPFATGIKAIDGPLTCGEGQRLGIFAGSGVGKSTLLGMIARYAEADVN 185
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
VIALIGERGREVLDFIE+DLG EG+K SV+V ATS+Q AL R++GA+ ATAIAEYFR+QG
Sbjct: 186 VIALIGERGREVLDFIENDLG-EGIKKSVLVVATSEQPALFRVKGAFVATAIAEYFREQG 244
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
K V+L+ DS+TRFAMAQREIGLA GEPP++RGYTPSVF+ LPKL+ER+G +KGSIT FY
Sbjct: 245 KKVLLMMDSLTRFAMAQREIGLAAGEPPSSRGYTPSVFALLPKLVERAGNDDKGSITAFY 304
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLVEGDD NEPI+DAVRG+LDGHIVL R LA +G YPA+++L S SRL +
Sbjct: 305 TVLVEGDDFNEPIADAVRGLLDGHIVLSRQLAGKGHYPAIDLLASNSRLMPELVDEQHLA 364
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
+ +MR +L Y ++ED+I +GAY+ G++ +D AI P+I FL Q+ ++ T
Sbjct: 365 LTLKMREILDIYRQNEDLILIGAYKPGTNPLLDRAIQLVPKINQFLQQKQNEKVDFTTTK 424
Query: 429 QKLSDI 434
+ L +
Sbjct: 425 EMLKTL 430
>gi|33593244|ref|NP_880888.1| type III secretion system ATPase [Bordetella pertussis Tohama I]
gi|29603230|emb|CAC79575.1| bscN [Bordetella pertussis Tohama I]
gi|33563619|emb|CAE42520.1| putative ATP synthase in type III secretion system [Bordetella
pertussis Tohama I]
Length = 444
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 210/428 (49%), Positives = 277/428 (64%), Gaps = 2/428 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
A+ + ++ GRVV+V +I++ P+ +GE+C + + EVVG L
Sbjct: 14 ALQDLSTLRIKGRVVQVVGTIIKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALL 73
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEP--YSAKRYPVVA 128
D+ G+ VI +G VPVG LLGRV+D L + D ++ K YPV A
Sbjct: 74 TPIGDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDAAESGPLHAHKFYPVFA 133
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PD +TR+ I + G+R +D LL G GQRLGIFA G GKSTLLGM+ + DV
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
V+ALIGERGREV +F+EH+LGPEG + SVIV ATSD+S++ R + AY ATAIAEYFRDQG
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
+ V+ L DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G ++ GSIT Y
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQTGSITALY 313
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLVEGDDMNEP++D R ILDGHIVL R L YPAV+VL S SR+ N V P K
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
+ RMR L+ Y + E ++ +G Y++G+ A+ D+AI +I FL Q D+ +DT+
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433
Query: 429 QKLSDITG 436
++++I G
Sbjct: 434 LRMAEIIG 441
>gi|33600613|ref|NP_888173.1| type III secretion system ATPase [Bordetella bronchiseptica RB50]
gi|33568212|emb|CAE32125.1| putative ATP synthase in type III secretion system [Bordetella
bronchiseptica RB50]
Length = 444
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 212/428 (49%), Positives = 278/428 (64%), Gaps = 2/428 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
A+ + ++ GRVV+V +I++ P+ +GE+C + + EVVG L
Sbjct: 14 ALQDLSTLRIKGRVVQVVGTIIKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALL 73
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSAD-GKPEPYSA-KRYPVVA 128
D+ G+ VI +G VPVG LLGRV+D L + D + P A K YPV A
Sbjct: 74 TPIGDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKFYPVFA 133
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PD +TR+ I + G+R +D LL G GQRLGIFA G GKSTLLGM+ + DV
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
V+ALIGERGREV +F+EH+LGPEG + SVIV ATSD+S++ R + AY ATAIAEYFRDQG
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
+ V+ L DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G ++ GSIT Y
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQTGSITALY 313
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLVEGDDMNEP++D R ILDGHIVL R L YPAV+VL S SR+ N V P K
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
+ RMR L+ Y + E ++ +G Y++G+ A+ D+AI +I FL Q D+ +DT+
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433
Query: 429 QKLSDITG 436
++++I G
Sbjct: 434 LRMAEIIG 441
>gi|117928052|ref|YP_872603.1| flagellar protein export ATPase FliI [Acidothermus cellulolyticus
11B]
gi|117648515|gb|ABK52617.1| flagellar protein export ATPase FliI [Acidothermus cellulolyticus
11B]
Length = 439
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 213/412 (51%), Positives = 286/412 (69%), Gaps = 4/412 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
++ NA++ P GRV + I + G A++G++ I+ P AEVV L+
Sbjct: 13 RWENALAAARP-SVHGRVTGIVGLSITAAGIRAAIGDVV-IVEGRQPT--LAEVVALHDE 68
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
+ M DV GV +G LV +G L+VPVG+ LLGRV+D L + DGK E R +
Sbjct: 69 SLACMPLGDVSGVAVGALVTPTGGPLTVPVGDALLGRVLDGLGRPIDGKGELRDTIRVGL 128
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
A+PP + R I +++ G+R +D++ GRGQRLGIFAG+G+GKS+LL MIAR T AD
Sbjct: 129 DATPPHPLRRTRISEQLSLGVRVLDTMTPCGRGQRLGIFAGSGVGKSSLLSMIARGTEAD 188
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
V+VIAL+GERGREV +F+E+DLG EGL SV+V ATSD+ AL R+R A+ AT IAE+FRD
Sbjct: 189 VSVIALVGERGREVREFLENDLGEEGLARSVVVVATSDEPALLRLRAAFVATRIAEWFRD 248
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
G+ V+L+ DS+TRFAMAQREIGL++GEP ATRGY PSVF+ LPKLLER+G E GSITG
Sbjct: 249 LGRHVILMMDSITRFAMAQREIGLSVGEPAATRGYPPSVFALLPKLLERAGAGEHGSITG 308
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLVEGDDMNEPI+D R ILDGH+ L R LA G YPAV+VL+SISRL+ ++
Sbjct: 309 LYTVLVEGDDMNEPIADTARSILDGHVTLSRRLATSGHYPAVDVLESISRLTGAITTAQQ 368
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV 418
+D + +R +L + ++ ++I++GAY GS+ +D A+ PRI DFL Q++
Sbjct: 369 RDDATFLRRILAAHRDARELIDIGAYVPGSNPDVDTALRLQPRITDFLRQDI 420
>gi|144900259|emb|CAM77123.1| flagellum-specific ATP synthase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 450
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 212/437 (48%), Positives = 288/437 (65%), Gaps = 10/437 (2%)
Query: 18 IKFTGRVVRVHDKLIESEG--PVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
I+ GRV V LIE+ G SVG+ C ++ D + E VG LM +T
Sbjct: 18 IQVYGRVAGVQGMLIEAGGVQRQISVGDRCHVVARDGRR-VPCEAVGFRNGRALLMPFTA 76
Query: 76 VQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADG-KPEPYSAKRYPVVASPPDAM 134
+ G+ +G V + LGRV++A + DG P P YP+ A+PP A
Sbjct: 77 IDGIGLGCRTEVHESEPVVHPSDAWLGRVINAFAQPVDGLGPLPLGDNPYPIRATPPSAH 136
Query: 135 TRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIG 194
+R+ + ++ G+RA++S L + RGQR+GIFAG+G+GKS++L M+A+NT+ DV++I LIG
Sbjct: 137 SRQRVAGKVDLGVRAVNSFLTMCRGQRMGIFAGSGVGKSSILSMMAKNTSCDVSIIGLIG 196
Query: 195 ERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLL 254
ERGRE +FIE DLG EG+K SV+V +TSD+S L R + AY ++AEYFRDQGKDV+ +
Sbjct: 197 ERGREAREFIEDDLGEEGMKRSVVVVSTSDESPLMRRQAAYLTLSVAEYFRDQGKDVLCM 256
Query: 255 FDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYTVLVE 313
DSVTRFAMAQREI L+ GEPPA++GYTP+VF+ LP+LLER+G + KGSITG +TVLV+
Sbjct: 257 MDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPGTGKGSITGLFTVLVD 316
Query: 314 GDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRM 373
GDD NEPISDAVRGILDGHIVLDR +A+RG+YPAVN+L+S+SR + R
Sbjct: 317 GDDHNEPISDAVRGILDGHIVLDRAIADRGRYPAVNILRSVSRTMPGCNNEQENALVSRA 376
Query: 374 RTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSD 433
R LL Y + ++I LGAY+KG+ A+D+AI +YP I LTQ D L+D +L+
Sbjct: 377 RKLLATYEDMAELIRLGAYRKGTDPAVDEAIHYYPMIEKLLTQGKKDATSLRDCYAQLAQ 436
Query: 434 ITGIDIPPEEFDEAGLG 450
+ G+ FD G+G
Sbjct: 437 VLGM-----PFDGDGMG 448
>gi|87307395|ref|ZP_01089540.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
gi|87290135|gb|EAQ82024.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
Length = 456
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 205/389 (52%), Positives = 270/389 (69%), Gaps = 4/389 (1%)
Query: 36 GPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVP 95
PV SV E I + L EVVG G + + + GV+ G V + S+P
Sbjct: 35 APVGSVVE----IQRQSGKPLAGEVVGFRGELTLVFPLEQLSGVRQGSSVRLIRTMRSIP 90
Query: 96 VGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLA 155
VG+ LLGR+VDA DG P P R P+ PP A +R I + TG+RAID +L
Sbjct: 91 VGDSLLGRIVDAHGNCIDGFPHPALTMRSPMDQDPPIATSRPRIHETFSTGVRAIDGMLT 150
Query: 156 VGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKH 215
G GQR+GIFAG+G+GKS LGM+A+ +++VNVIALIGERGREV DFIE DLGPEG+
Sbjct: 151 CGDGQRIGIFAGSGVGKSVTLGMMAKYASSEVNVIALIGERGREVNDFIERDLGPEGMAR 210
Query: 216 SVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEP 275
SV++ ATSDQ A+ R++ A AT+IAEYFR+ G+ V+ + DSVTRFAMAQREIGLA GEP
Sbjct: 211 SVVIVATSDQPAIMRVQAAMAATSIAEYFRESGRRVLFMMDSVTRFAMAQREIGLAAGEP 270
Query: 276 PATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVL 335
P T+GYTPSVF+ LPKL+ER+G S +GSIT FYTVLVEGDD NEP+SDAVRG+LDGH++L
Sbjct: 271 PTTKGYTPSVFAMLPKLVERTGRSAQGSITAFYTVLVEGDDTNEPVSDAVRGLLDGHVIL 330
Query: 336 DRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKG 395
R +A +G YPA+++L SISRL N + T+ A++ +R L+ Y E+ED+IN+GAY++G
Sbjct: 331 SRAIAAKGHYPAIDILASISRLMNDLVSEETRRAAQTIRELMSTYRENEDLINIGAYRQG 390
Query: 396 SSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
++ ID AI I FL Q +++ + +
Sbjct: 391 TNPQIDLAIRMRSEIDTFLRQAMEEKSSV 419
>gi|37527629|ref|NP_930973.1| type III secretion system ATPase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787064|emb|CAE16139.1| Type III secretion component protein SctN [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 440
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 210/429 (48%), Positives = 271/429 (63%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
K +A++E I+ GRV +V L+++ P +GELC + DN L AEV+G
Sbjct: 11 KMRHAINECRLIQIRGRVTQVTGTLLKAVIPGVRIGELCHLRNPDNTLSLLAEVIGFQQH 70
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
L ++ G+ V +G + V VG+ LLG+V+D L G P YPV
Sbjct: 71 QALLTPLGEMFGISSNTEVSPTGAMHQVGVGDYLLGQVLDGLGNPFSGGQLPEPQAWYPV 130
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
P M+RK I + G+RAID LL G GQR+GIFA G GKSTLL + R+ D
Sbjct: 131 YRDAPAPMSRKRIEHPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVD 190
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
V V+ALIGERGREV +FIE DLG EGLK SV+V ATSD+ A+ R + + AT+IAEYFRD
Sbjct: 191 VTVLALIGERGREVREFIESDLGEEGLKRSVLVVATSDRPAMERAKAGFVATSIAEYFRD 250
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
QGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT
Sbjct: 251 QGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITA 310
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P
Sbjct: 311 LYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEH 370
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
+ + +R L Y E E ++ +G YQKG D+AI H I ++L Q +P+ L
Sbjct: 371 QAQAGLLRKWLAKYEEVELLLQIGEYQKGQDPVADNAIAHIEAIRNWLRQGTHEPSDLPQ 430
Query: 427 TLQKLSDIT 435
TL +L IT
Sbjct: 431 TLAQLQQIT 439
>gi|33596839|ref|NP_884482.1| type III secretion system ATPase [Bordetella parapertussis 12822]
gi|33573540|emb|CAE37531.1| putative ATP synthase in type III secretion system [Bordetella
parapertussis]
Length = 444
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 211/428 (49%), Positives = 278/428 (64%), Gaps = 2/428 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
A+ + ++ GRVV+V +I++ P+ +GE+C + + EVVG L
Sbjct: 14 ALQDLSTLRIKGRVVQVVGTIIKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALL 73
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSAD-GKPEPYSA-KRYPVVA 128
D+ G+ VI +G VPVG LLGRV+D L + D + P A K YPV A
Sbjct: 74 TPIGDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKFYPVFA 133
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PD +TR+ I + G+R +D LL G GQRLGIFA G GKSTLLGM+ + DV
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
V+ALIGERGREV +F+EH+LGPEG + SVIV ATSD+S++ R + AY ATAIAEYFRDQG
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
+ V+ L DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G ++ GSIT Y
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQTGSITALY 313
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLVEGDDMNEP++D R ILDGHIVL R L YPAV+VL S SR+ N V P K
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
+ RMR L+ Y + E ++ +G +++G+ A+ D+AI +I FL Q D+ +DT+
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEHKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433
Query: 429 QKLSDITG 436
++++I G
Sbjct: 434 LRMAEIIG 441
>gi|83647778|ref|YP_436213.1| putative Yops secretion ATP synthase YscN [Hahella chejuensis KCTC
2396]
gi|83635821|gb|ABC31788.1| putative Yops secretion ATP synthase YscN [Hahella chejuensis KCTC
2396]
Length = 439
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 212/425 (49%), Positives = 273/425 (64%), Gaps = 3/425 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A++E P+ GRV V +I + P A +GELC + + P L AEVVG
Sbjct: 13 SAIAEVQPVGLRGRVTNVVGTIIRAIVPGAQIGELCYLESAGAPR-LLAEVVGFQEKEAL 71
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE--PYSAKRYPVV 127
L D+ G+ VI +G+ + VG LLGRV+D + DGK P + YPV
Sbjct: 72 LTPMGDMLGISTATEVITTGQSHHIAVGPHLLGRVLDGMGAPMDGKNADFPSDLQHYPVY 131
Query: 128 ASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADV 187
A P M R+ I + + G+RA+D LL G GQR+G+FA G GKSTLL M+ + DV
Sbjct: 132 ADAPSPMMRRMISEPLSLGVRALDGLLTCGEGQRMGVFAAAGGGKSTLLSMLVMGADVDV 191
Query: 188 NVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQ 247
VIALIGERGREV +FIEH+LGPEGL SV+V +TSD+ ++ R + AY AT IAEYFRDQ
Sbjct: 192 IVIALIGERGREVREFIEHNLGPEGLARSVLVISTSDRPSMERAKAAYVATTIAEYFRDQ 251
Query: 248 GKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGF 307
G+ V+LL DSVTRFA AQREIGLA GEPP RG+ PSVF++LPKLLER G ++KGSIT
Sbjct: 252 GQKVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFATLPKLLERVGFNDKGSITAL 311
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
YTVLVEGDDM+EPI+D VR ILDGHIVL R LA YPA++VL S SR+ ++ P +
Sbjct: 312 YTVLVEGDDMSEPIADEVRSILDGHIVLSRKLAATNHYPAIDVLASTSRVMTAITSPEHR 371
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
A+ +MR L+ Y + E ++ +G YQ+GS D+AI RI FL Q D+ + T
Sbjct: 372 QAAGKMRELMAKYVDVELLVKIGEYQRGSDPVADEAIAKIDRIRGFLKQATDEKCDFQTT 431
Query: 428 LQKLS 432
L L+
Sbjct: 432 LNALA 436
>gi|94987296|ref|YP_595229.1| Flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
intracellularis PHE/MN1-00]
gi|94731545|emb|CAJ54908.1| Flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
intracellularis PHE/MN1-00]
Length = 439
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 206/425 (48%), Positives = 297/425 (69%), Gaps = 2/425 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIIT--DDNPDGLKAEVVGLNGTIVQ 69
+ E++P++ G+V +V + E G + +G +C +++ D++ + + AEVVG +
Sbjct: 12 LKESNPLRVYGKVNKVVGLVAEGTGLKSPLGAVCHMLSGNDEHGEAIAAEVVGFREGNLL 71
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
M Y +++G++ G L+ + PVG +LG +A + G K P+ ++
Sbjct: 72 FMPYGEMRGIQPGSLIRNTSLPPVFPVGKEILGHAFNAFGEPLSGGNPIIPEKLIPLYSN 131
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP + R I+ + G+RAI+S++ +G+GQR+GI AG+G+GKSTL+GM+AR T+ADVNV
Sbjct: 132 PPSPLERPRIKDPLDVGVRAINSMITLGKGQRVGIMAGSGVGKSTLMGMMARYTSADVNV 191
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
I LIGERGREV++F+E +LGPEG+ SV++ ATSDQS L R+R AY ATA+AEYFRDQGK
Sbjct: 192 IGLIGERGREVVEFMEKELGPEGMTRSVLIIATSDQSPLVRMRAAYAATAVAEYFRDQGK 251
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
DV+L+ DSVTRFAMA REIGLA+GEPP T+GYTP+VF+ LPKLLER+G S G+ITG YT
Sbjct: 252 DVLLMMDSVTRFAMAAREIGLAVGEPPTTKGYTPTVFAQLPKLLERTGRSNTGTITGIYT 311
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLV+GDD NEPI+DAVR ILDGHIVL R+LA++ +PA++VL+SISRL + + P
Sbjct: 312 VLVDGDDFNEPIADAVRSILDGHIVLTRDLADQDHFPAIDVLRSISRLRSDICTPEQVQD 371
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ + + + ++EDMIN+GAY +GS+ ID AI + I FL Q + D + L+D+ +
Sbjct: 372 GRIVGRYMATFRKAEDMINIGAYIQGSNEEIDKAITMHGPIESFLKQNISDRSTLEDSFR 431
Query: 430 KLSDI 434
L D+
Sbjct: 432 LLHDL 436
>gi|54124956|gb|AAV30224.1| AscN [Aeromonas hydrophila]
Length = 440
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 212/426 (49%), Positives = 271/426 (63%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ E I+ GRV +V L+++ P VGELC + DN L+AEV+G
Sbjct: 14 HAIDECRLIQIRGRVTQVTGTLLKAVVPGVRVGELCHLRNPDNTLSLQAEVIGFAQHQAL 73
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V +G + V VG LLG+V+D L G P A YPV
Sbjct: 74 LTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFSGGQLPEPAAWYPVYRD 133
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+RK I Q I GIRAID LL G GQR+GIFA G GKSTLL + R+ DV V
Sbjct: 134 APAPMSRKRIEQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTV 193
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIE DLG EGLK +V+V ATSD+ A+ R + + AT+IAEYFRDQGK
Sbjct: 194 LALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGK 253
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT YT
Sbjct: 254 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYT 313
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P+ +
Sbjct: 314 VLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIITPDHQAQ 373
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ R+R+ L Y E E ++ +G YQKG D+AI I +L Q +P+ L D L
Sbjct: 374 AGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLRQRTHEPSALPDALA 433
Query: 430 KLSDIT 435
L +T
Sbjct: 434 TLDALT 439
>gi|46447031|ref|YP_008396.1| type III secretion system ATPase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400672|emb|CAF24121.1| probable type III secretion pathway protein sctN [Candidatus
Protochlamydia amoebophila UWE25]
Length = 454
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 211/415 (50%), Positives = 277/415 (66%), Gaps = 4/415 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ + LI++ P +GE+C I +P L+AEVVG V L ++ G+
Sbjct: 40 GRITEIVGMLIKAVVPQVKIGEVCLIKRAGDP--LRAEVVGFTKDEVLLSPLGEMTGIGP 97
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSAD--GKPEPYSAKRYPVVASPPDAMTRKPI 139
VI + L + VG LLGR+++ L + D K + YPV+ +PPD + R PI
Sbjct: 98 SSEVIPTHLPLHIKVGPQLLGRILNGLGEPLDEETKGPLILEETYPVIQAPPDPVKRMPI 157
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
I GIRAID +L G GQR+GIFA G GKSTLLGMIARN ADVNVI+LIGERGRE
Sbjct: 158 HNPISVGIRAIDGVLTTGLGQRVGIFAAAGGGKSTLLGMIARNAVADVNVISLIGERGRE 217
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
+ +FIE DLGPEGLK SV+V +TSDQ++ R+ AY TAIAEYFRDQGK V+L+ DSVT
Sbjct: 218 LREFIEKDLGPEGLKRSVLVVSTSDQASQLRLNAAYVGTAIAEYFRDQGKSVILMMDSVT 277
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNE 319
RFA A RE+GLA GEPPA GYTPSVFS+LPKLLER+G S+KGSIT FYT+LV GDDMNE
Sbjct: 278 RFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGNSDKGSITAFYTILVAGDDMNE 337
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
P++D VR ILDGHI+L LA + YPA++VL S SR+ N + +++ +L +
Sbjct: 338 PVADEVRSILDGHIILSSELARQYHYPAIDVLSSASRVMNAIVPKEHLQLVGKLKEVLAN 397
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
Y ++E +I +G Y++G+ A D AID+ ++ FL Q VD+ ++T+Q L +
Sbjct: 398 YKKNELLIKIGEYKRGADKAGDFAIDYIEKVLKFLKQGVDEKCSFQETVQLLKSL 452
>gi|2935537|gb|AAC38612.1| BscN [Bordetella bronchiseptica]
Length = 444
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 210/428 (49%), Positives = 277/428 (64%), Gaps = 2/428 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
A+ + ++ GRVV+V +I++ P+ +GE+C + + EVVG L
Sbjct: 14 ALQDLSTLRIKGRVVQVVGTIIKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALL 73
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSAD-GKPEPYSA-KRYPVVA 128
D+ G+ VI +G VPVG LLGRV+D L + D + P A K YPV A
Sbjct: 74 TPIGDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKFYPVFA 133
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
PD +TR+ I + G+R +D LL G GQRLGIFA G GKSTLLGM+ + DV
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
V+ALIGERGREV +F+EH+LGPEG + SVIV ATSD+S++ R + AY ATAIAEYFRDQG
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFY 308
+ V+ DSVTRFA AQREIGLA G+PP RGY PSVF++LPKL+ER+G ++ GSIT Y
Sbjct: 254 QRVLFRMDSVTRFARAQREIGLAAGDPPTRRGYPPSVFATLPKLMERAGMNQTGSITALY 313
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLVEGDDMNEP++D R ILDGHIVL R L YPAV+VL S SR+ N V P K
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
+ RMR L+ Y + E ++ +G Y++G+ A+ D+AI +I FL Q D+ +DT+
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433
Query: 429 QKLSDITG 436
++++I G
Sbjct: 434 LRMAEIIG 441
>gi|15834665|ref|NP_296424.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
gi|7190080|gb|AAF38931.1| type III secretion cytoplasmic ATPase SctN [Chlamydia muridarum
Nigg]
Length = 442
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 216/434 (49%), Positives = 281/434 (64%), Gaps = 5/434 (1%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FD + E GR++ V LI++ P VGE+C ++ + L EVVG
Sbjct: 8 FDTLMTELPEVQLTAVVGRIIEVVGMLIKAVVPDVRVGEVC-LVKRHGMEPLVTEVVGFT 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK---PEPYSA 121
V L ++ GV VIA+G L + G LLGRV++ L + D + P
Sbjct: 67 QNFVFLSPLGELSGVSPSSEVIATGLPLHIRAGAGLLGRVLNGLGEPIDIETKGPLENVD 126
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
YP+ +PPD + R+ +R + TG+R ID +L V +GQR+GIFAG G+GKS+LLGMIAR
Sbjct: 127 SIYPIFKAPPDPLHREKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIAR 186
Query: 182 NTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
N AD+NVIALIGERGREV +FIE+DLG EG+K SVIV +TSDQS+ R+ AY TAI
Sbjct: 187 NAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAI 246
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LPKLLER+G SE
Sbjct: 247 AEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASE 306
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL SISRL
Sbjct: 307 KGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTA 366
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ + R R +L Y +E +I +G Y++GS +D AIDH ++ FL Q++ +
Sbjct: 367 IVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHE 426
Query: 421 PAKLKDTLQKLSDI 434
++ Q+L I
Sbjct: 427 KTNYEEAAQQLRAI 440
>gi|15618617|ref|NP_224903.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029]
gi|15836239|ref|NP_300763.1| type III secretion system ATPase [Chlamydophila pneumoniae J138]
gi|16752333|ref|NP_444591.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39]
gi|33242065|ref|NP_877006.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183]
gi|4377010|gb|AAD18846.1| Yops secretion ATPase [Chlamydophila pneumoniae CWL029]
gi|6672040|dbj|BAA88657.1| Yop N (flagellar-type ATPase) [Chlamydophila pneumoniae]
gi|7188979|gb|AAF37934.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila
pneumoniae AR39]
gi|8979079|dbj|BAA98914.1| YopN [Chlamydophila pneumoniae J138]
gi|33236575|gb|AAP98663.1| YopN [Chlamydophila pneumoniae TW-183]
Length = 442
Score = 384 bits (986), Expect = e-105, Method: Composition-based stats.
Identities = 215/434 (49%), Positives = 283/434 (65%), Gaps = 5/434 (1%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FD + + + + GR+ V LI++ P VGE+C ++ + + L EVVG
Sbjct: 8 FDTLMSQLGDVNLTTVVGRITEVVGMLIKAVVPNVRVGEVC-LVKRNGMEPLVTEVVGFT 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK---PEPYSA 121
+ L ++ GV VI +G L + GN LLGRV++ L + D + P
Sbjct: 67 QSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKGPLQNVD 126
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ +P+ +PPD + R +RQ + TG+R ID +L V RGQR+GIFAG G+GKS+LLGMIAR
Sbjct: 127 QTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIAR 186
Query: 182 NTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
N ADVNVIALIGERGREV +FIE DLG EG+K SVIV +TSDQS+ R+ AY TAI
Sbjct: 187 NAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAI 246
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LP+LLERSG S+
Sbjct: 247 AEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLERSGASD 306
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL SISRL
Sbjct: 307 KGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTA 366
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ + + R +L Y +E +I +G Y++GS ID AIDH ++ FL Q++ +
Sbjct: 367 IVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREIDFAIDHIDKLNRFLKQDIHE 426
Query: 421 PAKLKDTLQKLSDI 434
++ Q+L I
Sbjct: 427 KTNYEEAAQQLRAI 440
>gi|46398256|gb|AAS91810.1| AscN [Aeromonas hydrophila]
Length = 440
Score = 384 bits (985), Expect = e-105, Method: Composition-based stats.
Identities = 210/426 (49%), Positives = 270/426 (63%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ E I+ GRV +V L+++ P +GELC + DN L+AEV+G
Sbjct: 14 HAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQAL 73
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V +G + V VG LLG+V+D L G P A YPV
Sbjct: 74 LTPLGEMFGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGNPFGGGHLPEPAAWYPVYRD 133
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+RK I Q I GIRAID LL G GQR+GIFA G GKSTLL + R+ DV V
Sbjct: 134 APPPMSRKRITQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTV 193
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIE DLG EGLK +V+V ATSD+ A+ R + + AT+IAEYFRDQGK
Sbjct: 194 LALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGK 253
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT YT
Sbjct: 254 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYT 313
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P +
Sbjct: 314 VLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQ 373
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ R+R+ L Y E E ++ +G YQKG D+AI I +L Q +P+ L + L
Sbjct: 374 AGRIRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLRQGTHEPSSLPEALT 433
Query: 430 KLSDIT 435
L +T
Sbjct: 434 TLEALT 439
>gi|153832446|ref|ZP_01985113.1| type III secretion apparatus H+-transporting two-sector ATPase
[Vibrio harveyi HY01]
gi|148871241|gb|EDL70113.1| type III secretion apparatus H+-transporting two-sector ATPase
[Vibrio harveyi HY01]
Length = 440
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 208/428 (48%), Positives = 277/428 (64%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 13 SAIKQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQHHAL 72
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V G++ V VG+ LLG+++D L + DG + YPV
Sbjct: 73 LTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQSTEPSAWYPVYRD 132
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ + DV V
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIEHDLG EG+ SV+V ATSD+ A+ R + A+ AT+IAEYFRDQGK
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT YT
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSITALYT 312
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ + +
Sbjct: 313 VLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQAS 372
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ MR +L Y E E +I +G YQ G+ + D AI I FL Q +P++L++T+
Sbjct: 373 AAHMREMLAKYEEVELLIKIGEYQHGADSRSDMAIAQGDDIRAFLRQGTHEPSELEETVT 432
Query: 430 KLSDITGI 437
+L + G+
Sbjct: 433 QLRGLAGL 440
>gi|145301459|ref|YP_001144298.1| AscN protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|38201225|emb|CAD56760.1| ascN protein [Aeromonas salmonicida subsp. salmonicida]
gi|66947962|emb|CAE83099.1| AscN protein [Aeromonas salmonicida subsp. salmonicida]
gi|142856341|gb|ABO92550.1| AscN protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|145284342|gb|ABP51923.1| AscN [Aeromonas veronii bv. sobria]
Length = 445
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 209/430 (48%), Positives = 271/430 (63%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D+ +A+ E I+ GRV +V L+++ P +GELC + DN L+AEV+G
Sbjct: 15 DQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQ 74
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
L ++ G+ V +G + V VG LLG+V+D L G P YP
Sbjct: 75 HQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFGGGHLPEPEAWYP 134
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
V P M+RK I + I GIRAID LL G GQR+GIFA G GKSTLL + R+
Sbjct: 135 VYRDAPAPMSRKRIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEV 194
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DV V+ALIGERGREV +FIE DLG EGLK +V+V ATSD+ A+ R + + AT+IAEYFR
Sbjct: 195 DVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFR 254
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
DQGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT
Sbjct: 255 DQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSIT 314
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
YTVLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P
Sbjct: 315 ALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPE 374
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ + R+R+ L Y E E ++ +G YQKG D+AI I +L Q +P+ L
Sbjct: 375 HQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIRQWLRQGTHEPSSLP 434
Query: 426 DTLQKLSDIT 435
+ L L +T
Sbjct: 435 EALSTLEALT 444
>gi|61219459|gb|AAX40636.1| HrpB6 [Xanthomonas oryzae pv. oryzicola]
Length = 486
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 201/414 (48%), Positives = 276/414 (66%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV V +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 70 GKVVEVVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSR 129
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I
Sbjct: 130 ETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEH 189
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 190 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 249
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 250 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 309
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 310 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 369
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ A+ R+R LL Y
Sbjct: 370 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSYHSQAAGRLRRLLAKYN 429
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
E E ++ +G Y++GS A D+AID I DFL+Q D + + TL++L+ +T
Sbjct: 430 EVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSDYESTLEQLASVT 483
>gi|38674625|gb|AAR26330.1| AscN [Aeromonas hydrophila]
Length = 440
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 209/426 (49%), Positives = 270/426 (63%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ + I+ GRV +V L+++ P +GELC + DN L+AEV+G
Sbjct: 14 HAIDDARLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQAL 73
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V +G + V VG LLG+V+D L G P A YPV
Sbjct: 74 LTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFAGGHLPEPAAWYPVYRD 133
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+RK I Q I GIRAID LL G GQR+GIFA G GKSTLL + R+ DV V
Sbjct: 134 APPPMSRKRIAQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTV 193
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIE DLG EGLK +V+V ATSD+ A+ R + + AT+IAEYFRDQGK
Sbjct: 194 LALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGK 253
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT YT
Sbjct: 254 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYT 313
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P +
Sbjct: 314 VLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQ 373
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ R+R+ L Y E E ++ +G YQKG D+AI I +L Q +P+ L + L
Sbjct: 374 AGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLKQGTHEPSSLPEALA 433
Query: 430 KLSDIT 435
L +T
Sbjct: 434 TLEALT 439
>gi|156974019|ref|YP_001444926.1| hypothetical protein VIBHAR_01730 [Vibrio harveyi ATCC BAA-1116]
gi|41834180|gb|AAS13318.1| VscN [Vibrio harveyi]
gi|156525613|gb|ABU70699.1| hypothetical protein VIBHAR_01730 [Vibrio harveyi ATCC BAA-1116]
Length = 440
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 208/428 (48%), Positives = 276/428 (64%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 13 SAIKQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQHHAL 72
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V G++ V VG+ LLG+++D L + DG + YPV
Sbjct: 73 LTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQSTEPSAWYPVYRD 132
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ + DV V
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIEHDLG EG+ SV+V ATSD+ A+ R + A+ AT+IAEYFRDQGK
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT YT
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSITALYT 312
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ +
Sbjct: 313 VLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQAP 372
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ MR +L Y E E +I +G YQ G+ + D AI I FL Q +P++L++T+
Sbjct: 373 AAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSELEETVT 432
Query: 430 KLSDITGI 437
+L + G+
Sbjct: 433 QLRGLAGL 440
>gi|51860705|gb|AAU11472.1| putative TTSS ATPase N [Photobacterium damselae subsp. piscicida]
Length = 440
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 208/428 (48%), Positives = 278/428 (64%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 13 SAIKQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQHHAL 72
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V G++ V VG+ LLG+++D L + DG + YPV
Sbjct: 73 LTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQSTEPSAWYPVYRD 132
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ + DV V
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIEHDLG +G+ SV+V ATSD+ A+ R + A+ AT+IAEYFRDQGK
Sbjct: 193 LALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT YT
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSITALYT 312
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ + +
Sbjct: 313 VLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQAS 372
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ MR +L Y E E +I +G YQ G+ + D AI I FL Q +P++L++T+
Sbjct: 373 AAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRVFLRQGTHEPSELEETVT 432
Query: 430 KLSDITGI 437
+LS + G+
Sbjct: 433 QLSGLAGL 440
>gi|29839803|ref|NP_828909.1| type III secretion system ATPase [Chlamydophila caviae GPIC]
gi|29834150|gb|AAP04787.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila caviae
GPIC]
Length = 442
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 215/434 (49%), Positives = 282/434 (64%), Gaps = 5/434 (1%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FD + +++ GR+ V LI++ P VGE+C ++ + L EVVG
Sbjct: 8 FDTLMSQLNDVHLTTVVGRITEVVGMLIKAVVPNVRVGEVC-LVKRQGMEPLVTEVVGFT 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK---PEPYSA 121
+ L ++ GV VI +G L + GN LLGRV++ L + D + P
Sbjct: 67 QSFAFLSPLGELSGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDTELKGPLVDVN 126
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ YPV +PPD + R+ +R + TG+R ID +L V RGQR+GIFAG G+GKS+LLGMIAR
Sbjct: 127 ETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIAR 186
Query: 182 NTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
N ADVNVIALIGERGREV +FIE DLG EG+K SVIV +TSDQS+ R+ AY TAI
Sbjct: 187 NAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAI 246
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LP+LLERSG S+
Sbjct: 247 AEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLERSGASD 306
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL SISRL
Sbjct: 307 KGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTA 366
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ + + R +L Y +E +I +G Y++GS +D AIDH ++ FL Q++ +
Sbjct: 367 IVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHE 426
Query: 421 PAKLKDTLQKLSDI 434
++ Q+L I
Sbjct: 427 KTNYEEAAQQLRAI 440
>gi|15605402|ref|NP_220188.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX]
gi|3329120|gb|AAC68264.1| Yops secretion ATPase [Chlamydia trachomatis D/UW-3/CX]
Length = 442
Score = 381 bits (978), Expect = e-104, Method: Composition-based stats.
Identities = 214/441 (48%), Positives = 286/441 (64%), Gaps = 8/441 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFT---GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK 57
M ++ ++ ++E ++ T GR++ V LI++ P VGE+C ++ + L
Sbjct: 1 MEEITTEFNTLMTELPDVQLTAVVGRIIEVVGMLIKAVVPDVRVGEVC-LVKRHGMEPLV 59
Query: 58 AEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-- 115
EVVG V L ++ GV V+A+G L + G LLGRV++ L D +
Sbjct: 60 TEVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETK 119
Query: 116 -PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKST 174
P YP+ +PPD + R +R + TG+R ID +L V +GQR+GIFAG G+GKS+
Sbjct: 120 GPLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSS 179
Query: 175 LLGMIARNTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGMIARN AD+NVIALIGERGREV +FIE+DLG EG+K SVIV +TSDQS+ R+
Sbjct: 180 LLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNA 239
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
AY TAIAEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LPKLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLL 299
Query: 294 ERSGTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKS 353
ER+G S+KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL S
Sbjct: 300 ERAGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLAS 359
Query: 354 ISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDF 413
ISRL + + R R +L Y +E +I +G Y++GS +D AIDH ++ F
Sbjct: 360 ISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRF 419
Query: 414 LTQEVDDPAKLKDTLQKLSDI 434
L Q++ + ++ Q+L I
Sbjct: 420 LKQDIHEKTNYEEAAQQLRAI 440
>gi|76789409|ref|YP_328495.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13]
gi|76167939|gb|AAX50947.1| SctN [Chlamydia trachomatis A/HAR-13]
Length = 442
Score = 381 bits (978), Expect = e-104, Method: Composition-based stats.
Identities = 214/441 (48%), Positives = 286/441 (64%), Gaps = 8/441 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFT---GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK 57
M ++ ++ ++E ++ T GR++ V LI++ P VGE+C ++ + L
Sbjct: 1 MEEITTEFNTLMTELPDVQLTAVVGRIIEVVGMLIKAVVPDVRVGEVC-LVKRHGMEPLV 59
Query: 58 AEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-- 115
EVVG V L ++ GV V+A+G L + G LLGRV++ L D +
Sbjct: 60 TEVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETK 119
Query: 116 -PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKST 174
P YP+ +PPD + R +R + TG+R ID +L V +GQR+GIFAG G+GKS+
Sbjct: 120 GPLESVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSS 179
Query: 175 LLGMIARNTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGMIARN AD+NVIALIGERGREV +FIE+DLG EG+K SVIV +TSDQS+ R+
Sbjct: 180 LLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNA 239
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
AY TAIAEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LPKLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLL 299
Query: 294 ERSGTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKS 353
ER+G S+KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL S
Sbjct: 300 ERAGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLAS 359
Query: 354 ISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDF 413
ISRL + + R R +L Y +E +I +G Y++GS +D AIDH ++ F
Sbjct: 360 ISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRF 419
Query: 414 LTQEVDDPAKLKDTLQKLSDI 434
L Q++ + ++ Q+L I
Sbjct: 420 LKQDIHEKTNYEEAAQQLRAI 440
>gi|89898777|ref|YP_515887.1| type III secretory flagellar biosynthesis ATP synthase
[Chlamydophila felis Fe/C-56]
gi|89332149|dbj|BAE81742.1| type III secretory flagellar biosynthesis ATP synthase
[Chlamydophila felis Fe/C-56]
Length = 442
Score = 380 bits (977), Expect = e-104, Method: Composition-based stats.
Identities = 217/441 (49%), Positives = 286/441 (64%), Gaps = 8/441 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFT---GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLK 57
M +L + +S+ + ++ T GR+ V LI++ P VGE+C ++ + L
Sbjct: 1 MDELTTNFDTLMSQLNDVRLTTVVGRITEVVGMLIKAVVPDVRVGEVC-LVKRQGMEPLV 59
Query: 58 AEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-- 115
EVVG L ++ GV VI +G L + GN LLGRV++ L + D +
Sbjct: 60 TEVVGFTQHFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEIK 119
Query: 116 -PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKST 174
P + YPV +PPD + R+ +R + TG+R ID +L V RGQR+GIFAG G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179
Query: 175 LLGMIARNTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGMIARN ADVNVIALIGERGREV +FIE DLG EG+K SVIV +TSDQS+ R+
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
AY TAIAEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LP+LL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLL 299
Query: 294 ERSGTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKS 353
ERSG S+KG+IT FYTVLV GDDMNEP++D V+ ILDGHIVL LA+ YPA++VL S
Sbjct: 300 ERSGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLAS 359
Query: 354 ISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDF 413
ISRL + + + R +L Y +E +I +G Y++GS +D AIDH ++ F
Sbjct: 360 ISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDRGVDFAIDHIDKLNRF 419
Query: 414 LTQEVDDPAKLKDTLQKLSDI 434
L Q++ + ++ Q+L I
Sbjct: 420 LKQDIHEKTNYEEASQQLRAI 440
>gi|27550061|gb|AAO18044.1| LscN [Photorhabdus luminescens]
Length = 440
Score = 380 bits (977), Expect = e-104, Method: Composition-based stats.
Identities = 208/426 (48%), Positives = 267/426 (62%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A++E I+ GRV +V L+++ P +GELC + DN L AEV+G
Sbjct: 14 HAINECRLIQIRGRVTQVTGTLLKAVIPGVRIGELCHLRNPDNTLSLLAEVIGFQQHQAL 73
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ G+ V +G + V VG+ LLG+V+D L G P YPV
Sbjct: 74 LTPLGEMFGISSNTEVSPTGAMHQVGVGDYLLGQVLDGLGNPFAGGQLPEPQAWYPVYRD 133
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+RK I + G+RAID LL G GQR+GIFA G GKSTLL + R+ DV V
Sbjct: 134 APAPMSRKRIEHPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVDVTV 193
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+ALIGERGREV +FIE DLG EGLK SV+V ATSD+ A+ R + + AT+IAEYFRDQGK
Sbjct: 194 LALIGERGREVREFIESDLGEEGLKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGK 253
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S+KGSIT YT
Sbjct: 254 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYT 313
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P +
Sbjct: 314 VLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEHQAQ 373
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ +R L Y E E ++ +G YQKG D+AI I +L Q +P+ L TL
Sbjct: 374 AGLLRNWLAKYEEVELLLQIGEYQKGQDLVADNAIARIDAIRSWLRQGTHEPSDLPQTLA 433
Query: 430 KLSDIT 435
L IT
Sbjct: 434 LLQQIT 439
>gi|116049647|ref|YP_791548.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
UCBPP-PA14]
gi|2459981|gb|AAB86534.1| PscN [Pseudomonas aeruginosa]
gi|115584868|gb|ABJ10883.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166727|gb|EAZ52238.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
C3719]
Length = 440
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 207/431 (48%), Positives = 273/431 (63%), Gaps = 3/431 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + +A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 8 LIVRMRHAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGF 67
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
L ++ GV V +G + V VG LLG+V+D L + DG P A
Sbjct: 68 QQHQALLTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAW 127
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
YPV P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN
Sbjct: 128 YPVYRDAPQPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNA 187
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DV V+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEY
Sbjct: 188 EVDVTVLALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEY 247
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG+ V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GS
Sbjct: 248 FRDQGRRVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGS 307
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++
Sbjct: 308 ITALYTVLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVD 367
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDD 420
+ + A+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D
Sbjct: 368 DDQRHAAGRLREWLAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSD 427
Query: 421 PAKLKDTLQKL 431
A+ L+ L
Sbjct: 428 YAQACAQLRSL 438
>gi|84321661|ref|ZP_00970016.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Pseudomonas aeruginosa C3719]
Length = 429
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 206/425 (48%), Positives = 271/425 (63%), Gaps = 3/425 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 3 HAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQAL 62
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ GV V +G + V VG LLG+V+D L + DG P A YPV
Sbjct: 63 LTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAWYPVYRD 122
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN DV V
Sbjct: 123 APQPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTV 182
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEYFRDQG+
Sbjct: 183 LALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGR 242
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GSIT YT
Sbjct: 243 RVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGSITALYT 302
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++ + + A
Sbjct: 303 VLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHA 362
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDDPAKLKD 426
+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D A+
Sbjct: 363 AGRLREWLAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSDYAQACA 422
Query: 427 TLQKL 431
L+ L
Sbjct: 423 QLRSL 427
>gi|15596894|ref|NP_250388.1| type III secretion system ATPase [Pseudomonas aeruginosa PAO1]
gi|9947670|gb|AAG05086.1|AE004596_12 ATP synthase in type III secretion system [Pseudomonas aeruginosa
PAO1]
Length = 440
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 207/431 (48%), Positives = 273/431 (63%), Gaps = 3/431 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + +A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 8 LIVRMRHAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGF 67
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
L ++ GV V +G + V VG LLG+V+D L + DG P A
Sbjct: 68 QQHQALLTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAW 127
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
YPV P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN
Sbjct: 128 YPVYRDAPQPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNA 187
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DV V+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEY
Sbjct: 188 EVDVTVLALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEY 247
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG+ V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GS
Sbjct: 248 FRDQGRRVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGS 307
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++
Sbjct: 308 ITALYTVLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVD 367
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDD 420
+ + A+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D
Sbjct: 368 DDQRHAAGRLREWLAKYEEVELLLKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSD 427
Query: 421 PAKLKDTLQKL 431
A+ L+ L
Sbjct: 428 YAQACAQLRSL 438
>gi|62184683|ref|YP_219468.1| type III secretion system ATPase [Chlamydophila abortus S26/3]
gi|62147750|emb|CAH63494.1| putative type III secretion or flagellar-type ATP synthase
[Chlamydophila abortus S26/3]
Length = 442
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 214/434 (49%), Positives = 281/434 (64%), Gaps = 5/434 (1%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
FD + +++ GR+ V LI++ P VGE+C ++ + L EVVG
Sbjct: 8 FDTLMSQLNDVHLTTVVGRITEVVGMLIKAVVPNVRVGEVC-LVKRYGMEPLVTEVVGFT 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK---PEPYSA 121
L ++ GV VI +G L + GN LLGRV++ L + D + P
Sbjct: 67 QNFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEIKGPLVDVN 126
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ YPV +PPD + R+ +R + TG+R ID +L V RGQR+GIFAG G+GKS+LLGMIAR
Sbjct: 127 ETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIAR 186
Query: 182 NTN-ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
N ADVNVIALIGERGREV +FIE DLG EG+K SVIV +TSDQS+ R+ AY TAI
Sbjct: 187 NAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAI 246
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V+L+ DSVTRFA A RE+GLA GEPPA GYTPSVFS+LP+LLERSG S+
Sbjct: 247 AEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLLERSGASD 306
Query: 301 KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
KG+IT FYTVLV GDDMNEP++D V+ ILDGH+VL LA+ YPA++VL SISRL
Sbjct: 307 KGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAIDVLASISRLLTA 366
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ + + R +L Y +E +I +G Y++GS +D AIDH ++ FL Q++ +
Sbjct: 367 IVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHE 426
Query: 421 PAKLKDTLQKLSDI 434
++ Q+L I
Sbjct: 427 KTNYEEASQQLRAI 440
>gi|107101129|ref|ZP_01365047.1| hypothetical protein PaerPA_01002161 [Pseudomonas aeruginosa PACS2]
Length = 429
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 206/425 (48%), Positives = 271/425 (63%), Gaps = 3/425 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 3 HAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQAL 62
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ GV V +G + V VG LLG+V+D L + DG P A YPV
Sbjct: 63 LTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAWYPVYRD 122
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN DV V
Sbjct: 123 APPPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTV 182
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEYFRDQG+
Sbjct: 183 LALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGR 242
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GSIT YT
Sbjct: 243 RVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGSITALYT 302
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++ + + A
Sbjct: 303 VLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHA 362
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDDPAKLKD 426
+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D A+
Sbjct: 363 AGRLREWLAKYEEVELLLKIGEYQKGQDSEADRAIEKIAAIRQWLRQGTHETSDYAQACA 422
Query: 427 TLQKL 431
L+ L
Sbjct: 423 QLRSL 427
>gi|28898442|ref|NP_798047.1| type III secretion system ATPase [Vibrio parahaemolyticus RIMD
2210633]
gi|28806659|dbj|BAC59931.1| ATP synthase in type III secretion system [Vibrio parahaemolyticus
RIMD 2210633]
Length = 440
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 208/431 (48%), Positives = 274/431 (63%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D +A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 9 DIQQSAIKQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
L ++ G+ V G++ V VG+ LLG+++D L + DG + YP
Sbjct: 69 HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPSAWYP 128
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
V P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ +
Sbjct: 129 VYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADV 188
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DV V+ALIGERGREV +FIEHDLG +G+ SV+V ATSD+ A+ R + A+ AT+IAEYFR
Sbjct: 189 DVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFR 248
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
DQGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT
Sbjct: 249 DQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSIT 308
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
YTVLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P+
Sbjct: 309 ALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPD 368
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ + +R +L Y E E +I +G YQ G+ D AI I FL Q +P+ L+
Sbjct: 369 HQAYAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDLE 428
Query: 426 DTLQKLSDITG 436
+ +L I G
Sbjct: 429 GAIAQLKGIAG 439
>gi|126193420|gb|EAZ57483.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
2192]
Length = 440
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 207/431 (48%), Positives = 273/431 (63%), Gaps = 3/431 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + +A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 8 LIVRMRHAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGF 67
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
L ++ GV V +G + V VG LLG+V+D L + DG P A
Sbjct: 68 QQHQALLTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAW 127
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
YPV P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN
Sbjct: 128 YPVYRDAPPPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNA 187
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DV V+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEY
Sbjct: 188 EVDVTVLALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEY 247
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG+ V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GS
Sbjct: 248 FRDQGRRVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGS 307
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++
Sbjct: 308 ITALYTVLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVD 367
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDD 420
+ + A+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D
Sbjct: 368 DDQRHAAGRLREWLAKYEEVELLLKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSD 427
Query: 421 PAKLKDTLQKL 431
A+ L+ L
Sbjct: 428 YAQACAQLRSL 438
>gi|75674724|ref|YP_317145.1| flagellum-specific ATP synthase [Nitrobacter winogradskyi Nb-255]
gi|74419594|gb|ABA03793.1| ATPase FliI/YscN [Nitrobacter winogradskyi Nb-255]
Length = 441
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 207/426 (48%), Positives = 288/426 (67%), Gaps = 3/426 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVGLNGTIVQL 70
+ E + + GRVV V ++E GP+ ++ +I+ + + AEVVG NG +
Sbjct: 8 IGEIERVNIYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVGRTIPAEVVGFNGDNAVV 67
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVAS 129
M + + GV+ G + + SV LGRV++AL + DGK P P P S
Sbjct: 68 MPFASLDGVRRGCRALVANASDSVRPAAAWLGRVLNALGEPIDGKGPLPQGPTPVPYRNS 127
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP A +R+ + Q + +RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +ADV+V
Sbjct: 128 PPSAHSRQRVGQPLDLKVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADVSV 187
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
I LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY AIAE+FRD+G+
Sbjct: 188 IGLIGERGREVQEFLQDDLGDEGLARSVVVVATSDEPALMRRQAAYLTLAIAEFFRDEGR 247
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFY 308
DVM + DSVTRFAMAQREIGL+ GEPP T+GYTP+VF+ LP+LLER+G ++KG+ITG +
Sbjct: 248 DVMCMMDSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGADKGTITGIF 307
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLV+GDD NEP++DAVRGILDGHIV++R +AERG+YPA+N+LKS+SR R + P
Sbjct: 308 TVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMPRSADPAFLP 367
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
R ++ Y++ E++I LGAY+ GS+A +D+AI P + DFL Q D+ ++D
Sbjct: 368 DITCARRMMATYSDMEELIRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTSIEDGY 427
Query: 429 QKLSDI 434
++L I
Sbjct: 428 RRLQQI 433
>gi|84328018|ref|ZP_00976029.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Pseudomonas aeruginosa 2192]
Length = 429
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 206/425 (48%), Positives = 271/425 (63%), Gaps = 3/425 (0%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+A+ PI+ GRV +V L+++ P +GELCQ+ D L AEV+G
Sbjct: 3 HAIEGCRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQAL 62
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVAS 129
L ++ GV V +G + V VG LLG+V+D L + DG P A YPV
Sbjct: 63 LTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAWYPVYRD 122
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
P M+R+ I + + G+RAID LL G GQR+GIFA G GKSTLL + RN DV V
Sbjct: 123 APPPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTV 182
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+AL+GERGREV +FIE DLG +GL+ SV+V ATSD+ A+ R + + AT+IAEYFRDQG+
Sbjct: 183 LALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGR 242
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+LL DS+TRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G SE+GSIT YT
Sbjct: 243 RVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSERGSITALYT 302
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDM+EP++D R ILDGHIVL R LA YPA++VL S+SR+ N++ + + A
Sbjct: 303 VLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHA 362
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL---TQEVDDPAKLKD 426
+ R+R L Y E E ++ +G YQKG + D AI+ I +L T E D A+
Sbjct: 363 AGRLREWLAKYEEVELLLKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSDYAQACA 422
Query: 427 TLQKL 431
L+ L
Sbjct: 423 QLRSL 427
>gi|115377823|ref|ZP_01465011.1| type III secretion apparatus H+-transporting two-sector ATPase
[Stigmatella aurantiaca DW4/3-1]
gi|115365155|gb|EAU64202.1| type III secretion apparatus H+-transporting two-sector ATPase
[Stigmatella aurantiaca DW4/3-1]
Length = 436
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 209/430 (48%), Positives = 279/430 (64%), Gaps = 2/430 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVV 61
+DL +Y + + ++ GRV + +I++ P VGE+ I + +KAEVV
Sbjct: 3 IDL-SRYYALLKDASLVRVRGRVTELTGLVIKASVPNVRVGEVVYIKSRVRGQ-VKAEVV 60
Query: 62 GLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA 121
G G V LM ++ G+ VI SG+ L++ G LLGRV+ + DGKP P
Sbjct: 61 GFQGDEVMLMPLGELYGIGPDSEVIPSGKPLTIKCGEGLLGRVLGGTGEPIDGKPLPDDL 120
Query: 122 KRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIAR 181
+ V PD TR I + G+R ID LL VG GQR+G+FAG+G+GKSTL+G IAR
Sbjct: 121 IDWSVDRDCPDPFTRMRIEHPLPLGVRCIDGLLTVGEGQRVGLFAGSGVGKSTLMGQIAR 180
Query: 182 NTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIA 241
NT A++NVIALIGERGREV +FIE LG EGL+ SV+V ATSDQ +L R++ AY ATAIA
Sbjct: 181 NTKAELNVIALIGERGREVREFIEDALGEEGLRRSVLVCATSDQPSLVRLKAAYVATAIA 240
Query: 242 EYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK 301
EYFR++G +VM + D+VTR A AQREIGLA+GEPPA +GY PSVFS LP++LER+G S K
Sbjct: 241 EYFRERGGNVMFMLDTVTRLARAQREIGLAVGEPPARQGYPPSVFSMLPRILERTGNSAK 300
Query: 302 GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRV 361
G T YT LV G DM EPI+D VRGILDGH +L+R L ER Q+PA++VL S+SR+ + +
Sbjct: 301 GKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRALGERNQWPAMDVLASLSRVMSGI 360
Query: 362 SGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDP 421
+ K A+ ++R L Y + D+I LGAYQ G+ D AID Y I D+L Q+
Sbjct: 361 VSKDHKKAAGKLRETLSTYEKQRDLILLGAYQYGTDPRTDYAIDKYDAIIDYLKQDTHSN 420
Query: 422 AKLKDTLQKL 431
+ ++T+ L
Sbjct: 421 STFEETVNGL 430
>gi|153836244|ref|ZP_01988911.1| type III secretion apparatus H+-transporting two-sector ATPase
[Vibrio parahaemolyticus AQ3810]
gi|149750519|gb|EDM61264.1| type III secretion apparatus H+-transporting two-sector ATPase
[Vibrio parahaemolyticus AQ3810]
Length = 440
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 207/431 (48%), Positives = 274/431 (63%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D +A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 9 DIQQSAIKQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
L ++ G+ V G++ V VG+ LLG+++D L + DG + YP
Sbjct: 69 HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPSAWYP 128
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
V P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ +
Sbjct: 129 VYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADV 188
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DV V+ALIGERGREV +FIEHDLG +G+ SV+V ATSD+ A+ R + A+ AT+IAEYFR
Sbjct: 189 DVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFR 248
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
DQGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT
Sbjct: 249 DQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSIT 308
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
YTVLVEGDDM EP++D R ILDGHI+L R LA YP ++VL+S SR+ N++ P+
Sbjct: 309 ALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPGIDVLRSASRVMNQIVEPD 368
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ ++ +R +L Y E E +I +G YQ G+ D AI I FL Q +P+ L+
Sbjct: 369 HQASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDLE 428
Query: 426 DTLQKLSDITG 436
+ +L I G
Sbjct: 429 GAIAQLKGIAG 439
>gi|21241185|ref|NP_640767.1| type III secretion system ATPase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106492|gb|AAM35303.1| HrcN protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 442
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 201/414 (48%), Positives = 278/414 (67%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV + +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 26 GKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELVGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I Q
Sbjct: 86 ETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEQ 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ + A+ R+R LL Y
Sbjct: 326 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
E E ++ +G Y++GS A D+AID I DFL+Q D + + TL++L+ +T
Sbjct: 386 EVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDRLSAYESTLEQLASVT 439
>gi|30524894|gb|AAP34339.1|AF499777_7 HrcN [Xanthomonas axonopodis pv. glycines]
Length = 442
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 201/414 (48%), Positives = 278/414 (67%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV + +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 26 GKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELVGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I Q
Sbjct: 86 ETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEQ 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ + A+ R+R LL Y
Sbjct: 326 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
E E ++ +G Y++GS A D+AID I DFL+Q D + + TL++L+ +T
Sbjct: 386 EVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSAYESTLEQLASVT 439
>gi|85713633|ref|ZP_01044623.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
gi|85699537|gb|EAQ37404.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
Length = 441
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 208/427 (48%), Positives = 288/427 (67%), Gaps = 5/427 (1%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPV--ASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+ E + + GRVV V ++E GP+ SVG I T P + AEVVG NG
Sbjct: 8 IGEIERVNIYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVGP-AIPAEVVGFNGDNAV 66
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVA 128
+M + + GV+ G + + V LGRV++A+ + DGK P P P
Sbjct: 67 VMPFAGLDGVRRGCRALIANASGQVRPAASWLGRVLNAMGEPIDGKGPLPQGPAPVPYRN 126
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
SPP A +RK + + + G+RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +AD++
Sbjct: 127 SPPPAHSRKRVGEPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADIS 186
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
VI L+GERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY A+AEYFRD+G
Sbjct: 187 VIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEG 246
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGF 307
+DVM + DSVTRFAMAQREIGL+ GEPP T+GYTP+VF+ LP+LLER+G S +G+ITG
Sbjct: 247 QDVMCMMDSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGSGEGTITGI 306
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
+TVLV+GDD NEP++DAVRGILDGHIV++R +AERG+YPA+N+LKS+SR + + P
Sbjct: 307 FTVLVDGDDHNEPVADAVRGILDGHIVMERVIAERGRYPAINILKSVSRTMPKSADPAFL 366
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
R R ++ Y++ E++I LGAY+ GS+A +D+AI P + DFL Q D+ +++
Sbjct: 367 PVITRARQMMATYSDMEELIRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTGIEEG 426
Query: 428 LQKLSDI 434
++L I
Sbjct: 427 YRRLQQI 433
>gi|92118831|ref|YP_578560.1| ATPase FliI/YscN [Nitrobacter hamburgensis X14]
gi|91801725|gb|ABE64100.1| ATPase FliI/YscN [Nitrobacter hamburgensis X14]
Length = 454
Score = 377 bits (969), Expect = e-103, Method: Composition-based stats.
Identities = 205/427 (48%), Positives = 288/427 (67%), Gaps = 4/427 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG-LKAEVVGLNGTIVQL 70
V + + + GRVV V ++E GP+ ++ +I+ + D + AEVVG NG +
Sbjct: 20 VGDIERVNIYGRVVGVRGLMVEIAGPIHAMSVGARILIETGGDRVIPAEVVGFNGDNAVV 79
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE-PYSAKRYPVVAS 129
M + + GV+ G + + V LGRV++A+ + DGK P P S
Sbjct: 80 MPFAGLDGVRRGCRAVIANASSQVRPAPSWLGRVLNAMGEPIDGKGALPQGPVPVPFRNS 139
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP A +RK + + + G+RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +AD++V
Sbjct: 140 PPPAHSRKRVGKPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISV 199
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
I L+GERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY A+AEYFRD+GK
Sbjct: 200 IGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGK 259
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGF 307
DVM + DSVTRFAMAQREIGL+ GEPP T+GYTP+VF+ LP+LLER+ G ++KG+ITG
Sbjct: 260 DVMCMMDSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGAADKGTITGI 319
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
+TVLV+GDD NEP++DAVRGILDGHIV+ R +AERG+YPA+NVLKS+SR + + P
Sbjct: 320 FTVLVDGDDHNEPVADAVRGILDGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPAFL 379
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
R R ++ +++ E++I LGAY+ GS+A +D+AI P + DFL Q D+ ++D
Sbjct: 380 PVITRGRQVMATFSDMEELIRLGAYRTGSNAEVDEAIRLNPLLEDFLRQAKDEVTSIEDG 439
Query: 428 LQKLSDI 434
++L I
Sbjct: 440 YRRLQQI 446
>gi|58579714|ref|YP_198730.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84621742|ref|YP_449114.1| HrcN protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|7350913|gb|AAF61281.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
gi|9711583|dbj|BAB07852.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
gi|50428346|dbj|BAD29983.1| HrcN [Xanthomonas oryzae pv. oryzae]
gi|58424308|gb|AAW73345.1| HrcN protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84365682|dbj|BAE66840.1| HrcN protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 442
Score = 377 bits (968), Expect = e-103, Method: Composition-based stats.
Identities = 200/414 (48%), Positives = 278/414 (67%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV V +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 26 GKVVEVVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I
Sbjct: 86 ETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEH 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ + A+ R+R LL Y
Sbjct: 326 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
E E ++ +G Y++GS A D+AI+ I DFL+Q D + + TL++L+++T
Sbjct: 386 EVETLVQVGEYRQGSDAVADEAINRIDAIRDFLSQPTDQLSDYESTLEQLANVT 439
>gi|89094452|ref|ZP_01167392.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
gi|89081344|gb|EAR60576.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
Length = 463
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 207/449 (46%), Positives = 294/449 (65%), Gaps = 10/449 (2%)
Query: 1 MVDLFDKYTN----AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGL 56
M LF++ + A + P + GR+ R+ IE+ G +VGE C I+ +
Sbjct: 1 MSKLFERLSRHRSIAFASVKP-QVIGRITRMIGLTIEAVGIKCAVGECCSIVLSPE-QHI 58
Query: 57 KAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKP 116
+AEVVG +G + LM ++G++ G VIA + VPVG LLGRV++ + K DGK
Sbjct: 59 EAEVVGFSGDRIYLMPLYPIEGLQAGTPVIARADTGMVPVGMNLLGRVLNGVGKPIDGKG 118
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
+ + + R PI Q + GIR I+SLL VGRGQR+G+FAG+G+GKS LL
Sbjct: 119 PLRPEAETGLAGEIINPLLRAPINQTLDVGIRTINSLLTVGRGQRMGLFAGSGVGKSVLL 178
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+ R T A++ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D S L R+R +
Sbjct: 179 GMMTRFTEAEIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDSPLMRLRASQL 238
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
+T IAEYFRDQGK+V+LL DS+TR+A AQREI LA+GEPPAT+GY PSVF+ +PKL+ER+
Sbjct: 239 STRIAEYFRDQGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKIPKLVERA 298
Query: 297 GTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G +++ G+IT FYTVL EGDD +P++D+ R ILDGH+VL R LAE+G YPA++V SI
Sbjct: 299 GNAQEGGGAITAFYTVLTEGDDQQDPVADSARAILDGHVVLARRLAEQGHYPAIDVEASI 358
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR ++ P+ + R + L Y ++ED+IN+GAY KGS D I++ P + FL
Sbjct: 359 SRAMPQIIEPDHLKMAMRFKQLYSKYRQNEDLINVGAYVKGSDPDTDFVIENLPSMNAFL 418
Query: 415 TQEVDDPAKLKDTLQKLSDITGIDIPPEE 443
Q++ +P L+ ++Q++ I + PP +
Sbjct: 419 RQDIGEPVPLQLSMQQMVMI--LSTPPPQ 445
>gi|83309727|ref|YP_419991.1| Flagellar biosynthesis/type III secretory pathway ATPase
[Magnetospirillum magneticum AMB-1]
gi|82944568|dbj|BAE49432.1| Flagellar biosynthesis/type III secretory pathway ATPase
[Magnetospirillum magneticum AMB-1]
Length = 450
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 205/438 (46%), Positives = 289/438 (65%), Gaps = 12/438 (2%)
Query: 18 IKFTGRVVRVHDKLIESEG--PVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
I+ G++ V L+E+ G SVG+ C ++ D + EVVG LM Y+
Sbjct: 18 IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVARDGRRVI-CEVVGFRQGRALLMPYSP 76
Query: 76 VQGVKIG-DLVIASGEILSVPVGNILLGRVVDALCKSADG-KPEPYSAKRYPVVASPPDA 133
++G+ +G + E + P LGRV++ + DG P P YPV A PP A
Sbjct: 77 IEGIGLGCRTEVQDAEPVVFP-DRGWLGRVINGFGEPVDGLGPLPGGDTAYPVKAQPPSA 135
Query: 134 MTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALI 193
+R + +I G+R++++ L RGQR+GIFAG+G+GKS+L+ M+ARNT+AD++V+ LI
Sbjct: 136 HSRSRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSLMSMMARNTSADISVLGLI 195
Query: 194 GERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVML 253
GERGRE +FIE DLGPEG+K SV+V +TSD+S L R + AY +AE+FRDQG DV+
Sbjct: 196 GERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGLDVLC 255
Query: 254 LFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGFYTVLV 312
+ DSVTRFAMAQREI L+ GEPPA++GYTP+VF+ LP+LLER+G KGSITG +TVLV
Sbjct: 256 MMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPGVGKGSITGLFTVLV 315
Query: 313 EGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKR 372
+ DD NEPI+DAVRGILDGHIVLDR++AERG+YPA+N+L+S+SR + D +R
Sbjct: 316 DADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRR 375
Query: 373 MRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLS 432
R+LL Y + ++I LGAY++G+ +D+AI +YP I FL Q + L+ +L+
Sbjct: 376 ARSLLSTYEDMAELIRLGAYRRGTDPKVDEAIHYYPAIEAFLGQLKTEATTLQTCYAQLA 435
Query: 433 DITGIDIPPEEFDEAGLG 450
++ G+ FD G+G
Sbjct: 436 EVLGM-----PFDGDGMG 448
>gi|83816428|ref|YP_446712.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
gi|83757822|gb|ABC45935.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
Length = 442
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 216/404 (53%), Positives = 286/404 (70%), Gaps = 2/404 (0%)
Query: 15 TDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAEVVGLNGTIVQLMS 72
T P + GRV V L+E+ A+VGE+C+I + + ++AEVVG+ + LM
Sbjct: 15 TVPARRYGRVTSVVGLLVEASELDAAVGEMCRIHVAEGGETRTVRAEVVGVKESTTVLMP 74
Query: 73 YTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPD 132
G++ G L+ + E +SVPVG LLGRV+DA + DGK + R P+ PP
Sbjct: 75 MEQTHGLQAGCLIRPADEGMSVPVGPDLLGRVIDAGGRPIDGKGPLGTDAREPIHRDPPS 134
Query: 133 AMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIAL 192
+ R I + TGIR+ID+ L +G+GQR GIFAG+G+GKSTLLGMIAR ADVNVIAL
Sbjct: 135 PLDRPLIDTPLSTGIRSIDAFLKMGKGQRTGIFAGSGVGKSTLLGMIARRAEADVNVIAL 194
Query: 193 IGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVM 252
IGERGREV +FI +LG EGL+ SV+V+ T D++A++R++ A A AIAE+FRD+G+DV+
Sbjct: 195 IGERGREVREFIVDNLGEEGLRRSVLVAVTGDEAAMSRVKAASAAMAIAEHFRDRGQDVL 254
Query: 253 LLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLV 312
L+ DS+TR A AQREIGLA+GEPP RGY PSVF+ LP+LLER+G +E G+ITG +TVLV
Sbjct: 255 LMMDSITRVAQAQREIGLAVGEPPTRRGYPPSVFALLPRLLERAGPAEAGTITGIFTVLV 314
Query: 313 EGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKR 372
EGDDM+EPISDA RGILDGHIVL R LAE G YPAV+VL+S+SR+ RV+ + A++
Sbjct: 315 EGDDMSEPISDAARGILDGHIVLSRELAEAGHYPAVDVLQSVSRVMPRVASLEAEAAAQE 374
Query: 373 MRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQ 416
R LL Y E ED+I++GAY++GS D A++ YP + DFL Q
Sbjct: 375 ARELLSAYEEVEDLISVGAYEEGSDPETDRAVEAYPALADFLQQ 418
>gi|78045988|ref|YP_362163.1| type III secretion system ATPase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|462306|sp|P80153|HRPB6_XANCV Probable ATP synthase hrpB6
gi|398113|gb|AAA27605.1| AA: 163-179 mononucleotide binding box A; 193-207 magnesium binding
domain; 244-256 mononucleotide binding box B
gi|984883|gb|AAB08461.1| HrpB6 [Xanthomonas campestris pv. vesicatoria]
gi|78034418|emb|CAJ22063.1| HrcN protein [Xanthomonas campestris pv. vesicatoria str. 85-10]
Length = 442
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 201/414 (48%), Positives = 277/414 (66%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV V +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 26 GKVVEVVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I
Sbjct: 86 ETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEH 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ + A+ R+R LL Y
Sbjct: 326 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPYDHSQAAGRLRRLLAKYN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
E E ++ +G Y++GS A D+AID I DFL+Q D + ++TL+ L+ +T
Sbjct: 386 EVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSAYENTLELLTSVT 439
>gi|120609166|ref|YP_968844.1| type III secretion apparatus H+-transporting two-sector ATPase
[Acidovorax avenae subsp. citrulli AAC00-1]
gi|58700621|gb|AAW81012.1| HrcN [Acidovorax avenae subsp. citrulli]
gi|120587630|gb|ABM31070.1| type III secretion apparatus H+-transporting two-sector ATPase
[Acidovorax avenae subsp. citrulli AAC00-1]
Length = 442
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 200/419 (47%), Positives = 277/419 (66%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
++ +G+V V L+ G A +GELC ++ + AEVVG L + +
Sbjct: 24 VRRSGKVAEVIGTLMRVNGLDAKLGELCHVLDERGELLQAAEVVGFANGQSILSPFGSIL 83
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
GV+ G V+ GE+LSVPVG LLGRV+D+L + DGK ++ PV A PP M R+
Sbjct: 84 GVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSETRPVFALPPTPMERE 143
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + TG++AID L+ +G GQR+GIFA G+GKSTL+GM+AR T DV+VIALIGERG
Sbjct: 144 MIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERG 203
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +F+E LG EG+ SV+V ATSD+S+ R + A+ ATA+AEY+RDQG V+L+ DS
Sbjct: 204 REVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDS 263
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
+TRFA AQREIGLA GEPPA RG+ PSVF+ +P+LLER+G +GSIT YTVL E +
Sbjct: 264 LTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGARGSITALYTVLYEDESG 323
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
N+PIS+ VRGILDGH++L R +A R QYPA++VL S+SR+ +++ + A R R L+
Sbjct: 324 NDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLM 383
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y E E ++ +G Y+ G+ D+A++ + I DFL Q D ++ L+DI+G
Sbjct: 384 AKYEEIEPLVQMGEYRPGNDPLADEAMEKHAAIRDFLNQSTSDLWDFGRSVDTLADISG 442
>gi|146338576|ref|YP_001203624.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
gi|146191382|emb|CAL75387.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
Length = 441
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 204/427 (47%), Positives = 284/427 (66%), Gaps = 2/427 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+S+ D + GRVV V ++E GP+ ++ +I+ + + AEV+G +G +M
Sbjct: 9 ISDIDAVNTYGRVVGVKGLMVEIAGPIHAMSVGARIVIETGSTVIPAEVIGFSGKNAVVM 68
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVASP 130
+ ++GV+ G + + V LGRVV+A+ + DGK P P A P +P
Sbjct: 69 PFAGLEGVRRGCRAVIANSANQVRPSPAWLGRVVNAMGEPIDGKGPLPSGAAPVPYRNNP 128
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P A +RK + + G+RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +A V+VI
Sbjct: 129 PPAHSRKRVGAPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVI 188
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY AI+EYFRD+GKD
Sbjct: 189 GLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKD 248
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYT 309
V+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G S +G+ITG +T
Sbjct: 249 VLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGSGEGTITGIFT 308
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLV+GDD NEP++DAVRGILDGH+V+ R++AERG+YPA+N+LKS+SR + + P
Sbjct: 309 VLVDGDDHNEPVADAVRGILDGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPT 368
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
R R ++ Y + E++I LGAY+ GSS +D+AI + + FL Q D+ L +
Sbjct: 369 IMRARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLETFLRQRKDEVCTLSQGYR 428
Query: 430 KLSDITG 436
+L I G
Sbjct: 429 ELEQILG 435
>gi|24251287|gb|AAN46406.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
Length = 442
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 199/413 (48%), Positives = 277/413 (67%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV V +++ G S+GE+C++ D +AEVVG + + L + ++ G+
Sbjct: 26 GKVVEVVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG LLGRV+D L + +DG+ P+ A PD M R+ I
Sbjct: 86 ETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEH 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG +GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A + QYPA++VL S+SR+ +++ + A+ R+R LL Y
Sbjct: 326 AEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E ++ +G Y++GS A D+AI+ I DFL+Q D + + TL++L+++
Sbjct: 386 EVETLVQVGEYRQGSDAVADEAINRIDAIRDFLSQPTDQLSDYESTLEQLANV 438
>gi|148257762|ref|YP_001242347.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
gi|146409935|gb|ABQ38441.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
Length = 440
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 203/427 (47%), Positives = 285/427 (66%), Gaps = 2/427 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
+S+ D + GRVV V ++E GP+ ++ +I+ + + + AEV+G +G +M
Sbjct: 8 ISDIDAVNTYGRVVGVKGLMVEIAGPIHAMSVGARIVIETGNNVIPAEVIGFSGKNAVVM 67
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVASP 130
+ ++GV+ G + + V LGRV++A+ + DGK P P A P +P
Sbjct: 68 PFAGLEGVRRGCRAVIANAANQVRPSPAWLGRVINAMGEPIDGKGPLPQGAAPVPYRNNP 127
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
P A +RK + + G+RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +A V+VI
Sbjct: 128 PPAHSRKRVGSPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVI 187
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY AI+EYFRD+GKD
Sbjct: 188 GLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKD 247
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYT 309
V+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G S +G+ITG +T
Sbjct: 248 VLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGSGEGTITGIFT 307
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLV+GDD NEP++DAVRGILDGH+V+ R++AERG+YPA+N+LKS+SR + + P
Sbjct: 308 VLVDGDDHNEPVADAVRGILDGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPT 367
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
R R ++ Y + E++I LGAY+ GSS +D+AI + + FL Q D+ L +
Sbjct: 368 IMRARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLEAFLRQRKDEVCGLAQGYR 427
Query: 430 KLSDITG 436
+L I G
Sbjct: 428 ELEQILG 434
>gi|46201676|ref|ZP_00054580.2| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Magnetospirillum magnetotacticum MS-1]
Length = 450
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 205/438 (46%), Positives = 288/438 (65%), Gaps = 12/438 (2%)
Query: 18 IKFTGRVVRVHDKLIESEG--PVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
I+ G++ V L+E+ G SVG+ C ++ D + EVVG LM Y+
Sbjct: 18 IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVARDGRRVI-CEVVGFRQGRALLMPYSP 76
Query: 76 VQGVKIG-DLVIASGEILSVPVGNILLGRVVDALCKSADG-KPEPYSAKRYPVVASPPDA 133
++G+ +G + E + P LGRV++ + DG P P YPV A PP A
Sbjct: 77 IEGIGLGCRTEVQDAEPVVYP-DRGWLGRVINGFGEPVDGLGPLPGGDIAYPVKAQPPSA 135
Query: 134 MTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALI 193
+R + +I G+R++++ L RGQR+GIFAG+G+GKS+++ M+ARNT+AD+ V+ LI
Sbjct: 136 HSRTRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSIMSMMARNTSADIAVLGLI 195
Query: 194 GERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVML 253
GERGRE +FIE DLGPEG+K SV+V +TSD+S L R + AY +AEYFRDQG DV+
Sbjct: 196 GERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLLRRQAAYMTLTVAEYFRDQGLDVLC 255
Query: 254 LFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYTVLV 312
+ DSVTRFAMAQREI L+ GEPPA++GYTP+VF+ LP+LLER+G + KGSITG +TVLV
Sbjct: 256 MMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPGTGKGSITGLFTVLV 315
Query: 313 EGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKR 372
+ DD NEPI+DAVRGILDGHIVLDR++AERG+YPA+N+L+S+SR + D +R
Sbjct: 316 DADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRR 375
Query: 373 MRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLS 432
R LL Y + ++I LGAY++G+ +D+AI +YP I FL Q + L+ +L+
Sbjct: 376 ARALLSTYEDMAELIRLGAYRRGTDPKVDEAIHYYPAIEAFLGQLKTESTNLQTCYAQLA 435
Query: 433 DITGIDIPPEEFDEAGLG 450
++ G+ FD G+G
Sbjct: 436 EVLGM-----PFDGDGMG 448
>gi|91224474|ref|ZP_01259736.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
gi|91190816|gb|EAS77083.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
Length = 440
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 207/426 (48%), Positives = 269/426 (63%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D +A+ T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 9 DIQQSAIKHTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
L ++ G+ V G++ V VG+ LLG +D L + DG + YP
Sbjct: 69 HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGTTLDGLGRPFDGTQSQEPSAWYP 128
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
V P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+
Sbjct: 129 VYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEV 188
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DV V+ALIGERGREV +FIEHDLG EG+ SV+V ATSD+ A+ R + A+ AT+IAEYFR
Sbjct: 189 DVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFR 248
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
DQGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT
Sbjct: 249 DQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSIT 308
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
YTVLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P+
Sbjct: 309 ALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPD 368
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ ++ +R +L Y E E +I +G YQ G+ + D AI I FL Q +P+ L
Sbjct: 369 HQASAAHIREMLAKYEEVELLIKIGEYQHGADSLADMAIAQSDDIRAFLRQGTHEPSDLD 428
Query: 426 DTLQKL 431
+ +L
Sbjct: 429 GAIAQL 434
>gi|116186970|ref|ZP_01476861.1| hypothetical protein VEx2w_02000598 [Vibrio sp. Ex25]
gi|151939319|gb|EDN58148.1| type III secretion apparatus H+-transporting two-sector ATPase
[Vibrio sp. Ex25]
Length = 440
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 206/426 (48%), Positives = 271/426 (63%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNG 65
D +A+ +T I+ GRV +V +I++ P VGELC++ D L AEVVG
Sbjct: 9 DIQQSAIRQTRLIQIRGRVTQVTGTIIKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
L ++ G+ V G++ V VG+ LLG +D L + DG + YP
Sbjct: 69 HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDQLLGTTLDGLGRPFDGTQSQEPSAWYP 128
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
V P M RK I + I G+R+ID LL G GQR+GIFA G GKSTLL + R+ +
Sbjct: 129 VYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADV 188
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
DV V+ALIGERGREV +FIEHDLG EG+ SV+V ATSD+ A+ R + A+ AT+IAEYFR
Sbjct: 189 DVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFR 248
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSIT 305
DQGK V+LL DSVTRFA AQREIGLA GEPP RGY PSVF++LPKL+ER+G S+KGSIT
Sbjct: 249 DQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDKGSIT 308
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
YTVLVEGDDM EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ P+
Sbjct: 309 ALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPD 368
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
+ ++ +R +L Y E E ++ +G YQ G+ + D AI I FL Q +P+ L
Sbjct: 369 HQASAAHLREMLAKYEEVELLLKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPSDLD 428
Query: 426 DTLQKL 431
+ +L
Sbjct: 429 GAIAQL 434
>gi|94968677|ref|YP_590725.1| ATPase FliI/YscN [Acidobacteria bacterium Ellin345]
gi|94550727|gb|ABF40651.1| ATPase FliI/YscN [Acidobacteria bacterium Ellin345]
Length = 437
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 202/431 (46%), Positives = 282/431 (65%), Gaps = 1/431 (0%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + AV +++ GRV +V LIESEGP++S+G+ C++I+ D E+VG
Sbjct: 5 LLSPFFAAVEGASTLRWHGRVTKVVGNLIESEGPLSSLGDSCEVISSKG-DVYPGEIVGF 63
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
V M+ +G++ GD V+ + S+ VG+ +LGRV+DA DG
Sbjct: 64 RDNAVLSMTLQPPKGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITPARPRGS 123
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV S P R P+R+ + GIRAID + GRGQR+GIF G+G+GKSTL+GM+ R +
Sbjct: 124 RPVDGSAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTLIGMLTRGS 183
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADV V+ALIGERGREV +F+E +G EG++ +V++ +TSDQS L R+R A ATA+AE+
Sbjct: 184 AADVTVLALIGERGREVREFVEESIGEEGMQRAVVIVSTSDQSPLLRLRAAMAATAVAEH 243
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
F +GK V+L+ DS+TRF MAQREIGLA GEPP +GYTPSVF+ L +L+ER+G E+GS
Sbjct: 244 FAAEGKHVLLVLDSLTRFGMAQREIGLAAGEPPTAKGYTPSVFTLLARLVERAGNFERGS 303
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
ITGFYTVL+EGDD+ +P+ DAVR +LDGHIVLDR LA G YP + +L+S+SRL++ V
Sbjct: 304 ITGFYTVLMEGDDLQDPLVDAVRSLLDGHIVLDRKLASDGHYPPIQILESLSRLASAVCS 363
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
AS+++R L Y SED+I +GAYQ+G +D A+ P I L Q +
Sbjct: 364 VQHLQASRKLRAWLASYVRSEDLIRIGAYQRGGDPVLDQAVSAMPEIRKLLIQGALERTS 423
Query: 424 LKDTLQKLSDI 434
L++ + +S I
Sbjct: 424 LEEIVSGMSAI 434
>gi|17549091|ref|NP_522431.1| type III secretion system ATPase [Ralstonia solanacearum GMI1000]
gi|17431342|emb|CAD18021.1| hrp conserved protein hrcn [Ralstonia solanacearum]
Length = 439
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 203/431 (47%), Positives = 273/431 (63%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L D +A T I+ G+VV V L+ G +GELC + D + EVVG
Sbjct: 6 LLDSLESAARTTPLIRRFGKVVEVTGTLLRVGGVDVRLGELCTLTEADGTVMQEGEVVGF 65
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ + ++ V G+ V+ SG LSV +G LLGRV+D L + ADG P +
Sbjct: 66 SEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLDVVEY 125
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV A+ PD MTR+ + + TG+R ID L + GQR+GIFA G+GKSTL+GM AR T
Sbjct: 126 VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMFARGT 185
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DVNVI LIGERGREV +FIE LG EG++ SV+V ATSD+SA+ R + AY TA+AEY
Sbjct: 186 ECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYVGTAVAEY 245
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG V+L+ DS+TRFA AQREIGLA GEPP RG+ PSVF+ LP+LLER+G S GS
Sbjct: 246 FRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMSAAGS 305
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVL E + N+P+++ VRGILDGH++L R++A R +YPA+++L S+SR+ +V
Sbjct: 306 ITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRVMTQVMP 365
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
+ DA+ RMR LL Y E E ++ +G Y++GS D A+ + FL Q D+
Sbjct: 366 RDHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFLRQRTDEWCS 425
Query: 424 LKDTLQKLSDI 434
+T + L +I
Sbjct: 426 PDETRRLLDEI 436
>gi|89111182|dbj|BAE80271.1| HrcN [Acidovorax avenae subsp. avenae]
Length = 442
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 200/419 (47%), Positives = 276/419 (65%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
++ +G+V V L+ G A +GELC ++ + AEVVG L + +
Sbjct: 24 VRRSGKVAEVIGTLMRVNGLDAKLGELCHVLDERGELLQAAEVVGFANGQSILSPFGSIL 83
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
GV+ G V+ GE+LSVPVG LLGRV+D+L + DGK ++ PV A PP M R+
Sbjct: 84 GVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSETRPVFALPPTPMERE 143
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + TG++AID L+ +G GQR+GIFA G+GKSTL+GM+AR T DV+VIALIGERG
Sbjct: 144 MIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERG 203
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +F+E LG EG+ SV+V ATSD+S+ R + A+ ATA+AEY+RDQG V+L+ DS
Sbjct: 204 REVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDS 263
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
+TRFA AQREIGLA GEPPA RG+ PSVF+ +P+LLER+G +GSIT YTVL E +
Sbjct: 264 LTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGARGSITALYTVLYEDESG 323
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
N+PIS+ VRGILDGH++L R +A R QYPA++VL S+SR+ +++ + A R R L+
Sbjct: 324 NDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLM 383
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y E E ++ +G Y+ G+ D+A++ + I FL Q D ++ LSDI+G
Sbjct: 384 AKYEEIEPLVQMGEYKPGNDPLADEAMEKHEEIRAFLNQSTSDLWDFGRSVDTLSDISG 442
>gi|89111149|dbj|BAE80239.1| HrcN [Acidovorax avenae subsp. avenae]
Length = 442
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 200/419 (47%), Positives = 276/419 (65%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
++ +G+V V L+ G A +GELC ++ + AEVVG L + +
Sbjct: 24 VRRSGKVAEVIGTLMRVNGLDAKLGELCHVLDERGELLQAAEVVGFANGQSILSPFGSIL 83
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
GV+ G V+ GE+LSVPVG LLGRV+D+L + DGK ++ PV A PP M R+
Sbjct: 84 GVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSETRPVFALPPTPMERE 143
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + TG++AID L+ +G GQR+GIFA G+GKSTL+GM+AR T DV+VIALIGERG
Sbjct: 144 MIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERG 203
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +F+E LG EG+ SV+V ATSD+S+ R + A+ ATA+AEY+RDQG V+L+ DS
Sbjct: 204 REVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDS 263
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
+TRFA AQREIGLA GEPPA RG+ PSVF+ +P+LLER+G +GSIT YTVL E +
Sbjct: 264 LTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGARGSITALYTVLYEDESG 323
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
N+PIS+ VRGILDGH++L R +A R QYPA++VL S+SR+ +++ + A R R L+
Sbjct: 324 NDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLM 383
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y E E ++ +G Y+ G+ D+A++ + I FL Q D ++ LSDI+G
Sbjct: 384 AKYEEIEPLVQMGEYKPGNDPLADEAMEKHEEIRAFLNQSTSDLWDFGRSVDTLSDISG 442
>gi|152965619|ref|YP_001361403.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
gi|151360136|gb|ABS03139.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
Length = 453
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 201/399 (50%), Positives = 278/399 (69%), Gaps = 2/399 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GRV + +E G A+VGE ++ D + AEVV G+ ++ + + G+
Sbjct: 35 GRVSGIVGLSVEVSGLEAAVGETVRL--GDERYSIPAEVVAAEGSRLRCLPLGHLTGLAA 92
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +A VPVG LLGRVVDAL DG P ++A R P+ A+PP AMTR +
Sbjct: 93 GAPAVAVRRPSDVPVGPALLGRVVDALGNPLDGGPPLHTAPRGPLHATPPPAMTRGRVDA 152
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RA+D+L+ GRGQR GIFAG+G+GKS+LL MIAR T+ADV+V+AL+GERGREV
Sbjct: 153 PLSLGVRALDTLVPAGRGQRFGIFAGSGVGKSSLLSMIARGTSADVSVLALVGERGREVR 212
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F+E DLGPEGL SV+V ATSD++ + R+R + TAT +AE FRD G D +L+ DS+TR
Sbjct: 213 EFLEDDLGPEGLARSVVVIATSDEAPVLRLRASLTATTVAESFRDMGADCVLMMDSLTRV 272
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQREIGL++GEPPATRGY PSVF+ +P+LLER+G GSITG YTVLV+GDD NEPI
Sbjct: 273 AMAQREIGLSVGEPPATRGYPPSVFALMPRLLERAGPGVTGSITGIYTVLVDGDDHNEPI 332
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+D R ILDGH+VLDR LA G +P ++VL+S+SR++ RV+ P K A+ +R ++ +
Sbjct: 333 ADNARSILDGHVVLDRRLATAGHFPTIDVLESVSRVAGRVTTPEQKSAATALRRVMAAHR 392
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+++++I++GAYQ G++ +D A+ P I FL Q++ D
Sbjct: 393 DAKELIDVGAYQPGANPEVDAAVAQLPAINAFLRQDIHD 431
>gi|91978136|ref|YP_570795.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB5]
gi|91684592|gb|ABE40894.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB5]
Length = 441
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 202/426 (47%), Positives = 280/426 (65%), Gaps = 3/426 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVGLNGTIVQL 70
+ + D + GRVV V ++E GP+ ++ +I+ + + EV+G G +
Sbjct: 8 IGDIDGVNIYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGASRTIPCEVIGFTGNNAMV 67
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVAS 129
M + ++GV+ G + + V LGRV++AL + DGK P P A P S
Sbjct: 68 MPFAGLEGVRRGCRAVIANSAAQVRPSPAWLGRVINALGEPIDGKGPLPQGASPMPFRNS 127
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP A +RK + + G+RA+++ L RGQR+GIFAG+G+GKS LL M+ARN +A V+V
Sbjct: 128 PPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSV 187
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
I LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY +IAEYFRD+GK
Sbjct: 188 IGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEGK 247
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGFY 308
DV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+I+G +
Sbjct: 248 DVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLREGTISGIF 307
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLV+GDD NEP++DAVRGILDGHIV+ R++AERG+YPA+NVLKS+SR R + P
Sbjct: 308 TVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRYPAINVLKSVSRTMPRSADPAYLP 367
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
KR R ++ Y + E++I LGAY+ GSS +D+A+ + + +FL Q D+ L
Sbjct: 368 VIKRARQVMATYADMEELIRLGAYRPGSSVEVDEAVRLHEPLEEFLRQAKDEATSLSSGY 427
Query: 429 QKLSDI 434
+L I
Sbjct: 428 AQLEQI 433
>gi|145597142|ref|YP_001154606.1| Yops secretion ATP synthase [Yersinia pestis Pestoides F]
gi|145212910|gb|ABP42316.1| Yops secretion ATP synthase [Yersinia pestis Pestoides F]
Length = 439
Score = 374 bits (960), Expect = e-102, Method: Composition-based stats.
Identities = 204/418 (48%), Positives = 263/418 (62%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
I+ GRV +V L+++ P +GELC + DN L+AEV+G L+ ++
Sbjct: 21 IQIRGRVTQVTGTLLKAVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMY 80
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ V +G + V VG LLG+V+D L + DG P A YPV P M+RK
Sbjct: 81 GISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRK 140
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + GIR ID LL G GQR+GIFA G GKSTLL + R+ DV V+ALIGERG
Sbjct: 141 LITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 200
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +FIE DLG EGL+ +V+V ATSD+ +L R + + AT+IAEYFRDQGK V+LL DS
Sbjct: 201 REVREFIESDLGEEGLRKAVLVVATSDRPSLERAKAGFVATSIAEYFRDQGKRVLLLMDS 260
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
VTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S KGSIT YTVLVEGDDM
Sbjct: 261 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSKGSITALYTVLVEGDDM 320
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ K + +R LL
Sbjct: 321 TEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLL 380
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
Y E E ++ +G YQKG D AI+ I +L Q + + +TL L +T
Sbjct: 381 AKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSHFNETLNLLETLT 438
>gi|83646778|ref|YP_435213.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
gi|83634821|gb|ABC30788.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
Length = 416
Score = 374 bits (960), Expect = e-102, Method: Composition-based stats.
Identities = 198/410 (48%), Positives = 274/410 (66%), Gaps = 1/410 (0%)
Query: 26 RVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLV 85
+ + ++E GP A +GE+C++ + + AEVVG V LM V G+ +G V
Sbjct: 3 QFYGSVLECAGPDAFLGEVCEVFSPGQLTSIAAEVVGFRHGRVLLMPLGRVTGIHVGSEV 62
Query: 86 IASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVT 145
+A+G SV V + +LG+VV+A DG K YP+ P + M R P + +
Sbjct: 63 VATGLPASVTVNDGMLGKVVNAFGTPLDGGVLSSPGKSYPLYREPINPMERAPCDEPLNL 122
Query: 146 GIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIE 205
G+R ID+ A+ +GQR+GIFAG+G+GKSTLLGMIA+ +A+VNVIALIGERGREV +FI+
Sbjct: 123 GVRVIDAFCAMAKGQRVGIFAGSGVGKSTLLGMIAKQCDAEVNVIALIGERGREVSEFIQ 182
Query: 206 HDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQ 265
+LG +GLK SV+V+AT+D+ AL R+ A+ ATAIAEYF+D+GK VML DS+TR A AQ
Sbjct: 183 DNLGSDGLKKSVVVAATADEPALVRVHAAFVATAIAEYFKDKGKHVMLYMDSITRLATAQ 242
Query: 266 REIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK-GSITGFYTVLVEGDDMNEPISDA 324
REIGLAIGEPP +RGYTPS FS LP+L ER+G + GSI+ YTVLVEGDD NEP+SD
Sbjct: 243 REIGLAIGEPPTSRGYTPSTFSLLPRLTERAGIFKSGGSISALYTVLVEGDDFNEPVSDT 302
Query: 325 VRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESE 384
VR ILDGHI+L R LA +G +PA+++ +S+SRL RV+G + A + + L Y ES+
Sbjct: 303 VRSILDGHIMLKRQLAHQGIFPAIDIRESMSRLFPRVTGKEQQMAVRELIRLESLYQESK 362
Query: 385 DMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++I LGAY++G ID AI + + F++Q + +D + L +
Sbjct: 363 ELIELGAYKQGGDPEIDQAIRVHKALNKFISQSEGESGSNRDIVTALKQV 412
>gi|119899009|ref|YP_934222.1| ATP synthase [Azoarcus sp. BH72]
gi|119671422|emb|CAL95335.1| ATP synthase [Azoarcus sp. BH72]
Length = 468
Score = 374 bits (959), Expect = e-102, Method: Composition-based stats.
Identities = 208/445 (46%), Positives = 282/445 (63%), Gaps = 23/445 (5%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
V +P ++ GR+ R++ ++E+ G +G CQI+ + ++AEVVG NG + +M
Sbjct: 19 VEGANPFQYAGRLTRINGLVMEAAGLKLPLGSGCQIVVPGS-GAVEAEVVGFNGEKLYMM 77
Query: 72 SYTDVQGVKIGDLVI--------------------ASGEILSVPVGNILLGRVVDALCKS 111
DV G+ G V+ AS +PVG+ +LGRVVD +
Sbjct: 78 PTDDVFGLAPGAQVLPMENSVPRLVPGKRLGPRRRASDRAKHLPVGDAMLGRVVDGAGRP 137
Query: 112 ADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIG 171
DG + + + P + + R PI Q + GIRAI+SLL VGRGQRLG+FAG+G+G
Sbjct: 138 LDGLGPLNTVETRSLQGRPVNPLNRAPIAQPLDVGIRAINSLLTVGRGQRLGLFAGSGVG 197
Query: 172 KSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARI 231
KS L+GM+AR T+AD+ V+ LIGERGREV +FIEH+LG EG K SV+V+A +D S L R+
Sbjct: 198 KSVLIGMMARFTSADIIVVGLIGERGREVKEFIEHNLGAEGRKRSVVVAAPADNSPLMRL 257
Query: 232 RGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPK 291
+GA AT IAEYFRDQGK V+L+ DS+TR+AMAQREI LAIGEPP TRGY PSVF+ LP
Sbjct: 258 QGAAYATTIAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPA 317
Query: 292 LLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVN 349
L+ER+G GSIT FYTVL EGDD +PI+D+ R ILDGH VL RNLA++G YPA++
Sbjct: 318 LVERAGNGPDGGGSITAFYTVLAEGDDQQDPIADSARAILDGHFVLSRNLADQGHYPAID 377
Query: 350 VLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPR 409
+ +SISR + + D +R + L Y S D+I +GAYQ G+ +D A+ YPR
Sbjct: 378 IEQSISRAMHTLVDNAHFDLVRRFKQLFSRYQRSRDLIAVGAYQPGAEPLLDMAVALYPR 437
Query: 410 IYDFLTQEVDDPAKLKDTLQKLSDI 434
+ FL Q VD+ + KL+ +
Sbjct: 438 LEAFLQQRVDEREPYDGAVMKLAQL 462
>gi|16082728|ref|NP_395174.1| type III secretion system ATPase [Yersinia pestis CO92]
gi|28373029|ref|NP_783675.1| YscN [Yersinia enterocolitica]
gi|31795281|ref|NP_857742.1| needle complex secretion ATPase [Yersinia pestis KIM]
gi|31795483|ref|NP_857937.1| needle complex secretion ATPase [Yersinia pestis KIM]
gi|32470288|ref|NP_863523.1| YscN [Yersinia enterocolitica]
gi|45478544|ref|NP_995371.1| type III secretion system ATPase [Yersinia pestis biovar Microtus
str. 91001]
gi|51593909|ref|YP_068476.1| putative Yops secretion ATP synthase [Yersinia pseudotuberculosis
IP 32953]
gi|89101429|ref|ZP_01174194.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia pestis biovar Orientalis str. IP275]
gi|108793664|ref|YP_636814.1| Yop secretion ATP synthase [Yersinia pestis Antiqua]
gi|122815812|ref|YP_001004078.1| probable type III secretion system ATP synthase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|149192699|ref|YP_001293931.1| ATPase for protein unfolding and Type III secretion [Yersinia
pestis CA88-4125]
gi|55977793|sp|P40291|YSCN_YERPS Probable ATP synthase yscN (YOPS secretion ATPase)
gi|14579346|gb|AAK69223.1|AF336309_18 YscN [Yersinia enterocolitica]
gi|2996241|gb|AAC62564.1| Yops secretion ATPase YscN homolog [Yersinia pestis KIM]
gi|3822071|gb|AAC69791.1| Yops secretion protein [Yersinia pestis KIM]
gi|5832460|emb|CAB54917.1| putative Yops secretion ATP synthase [Yersinia pestis CO92]
gi|23630601|gb|AAN37557.1| YscN [Yersinia enterocolitica]
gi|45357166|gb|AAS58562.1| putative Yops secretion ATP synthase YscN [Yersinia pestis biovar
Microtus str. 91001]
gi|51591606|emb|CAF25410.1| putative Yops secretion ATP synthase [Yersinia pseudotuberculosis
IP 32953]
gi|108782211|gb|ABG16266.1| Yop secretion ATP synthase [Yersinia pestis Antiqua]
gi|121663686|emb|CAL10048.1| probable type III secretion system ATP synthase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|148872357|gb|ABR14847.1| ATPase for protein unfolding and Type III secretion [Yersinia
pestis CA88-4125]
Length = 439
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 203/418 (48%), Positives = 263/418 (62%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
I+ GRV +V L+++ P +GELC + DN L+AEV+G L+ ++
Sbjct: 21 IQIRGRVTQVTGTLLKAVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMY 80
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ V +G + V VG LLG+V+D L + DG P A YPV P M+RK
Sbjct: 81 GISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRK 140
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + GIR ID LL G GQR+GIFA G GKSTLL + R+ DV V+ALIGERG
Sbjct: 141 LITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 200
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +FIE DLG EGL+ +V+V ATSD+ ++ R + + AT+IAEYFRDQGK V+LL DS
Sbjct: 201 REVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDS 260
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
VTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S KGSIT YTVLVEGDDM
Sbjct: 261 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSKGSITALYTVLVEGDDM 320
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ K + +R LL
Sbjct: 321 TEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLL 380
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
Y E E ++ +G YQKG D AI+ I +L Q + + +TL L +T
Sbjct: 381 AKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSHFNETLNLLETLT 438
>gi|10955560|ref|NP_052401.1| ATPase YscN [Yersinia enterocolitica]
gi|732261|sp|P40290|YSCN_YEREN Probable ATP synthase yscN (YOPS secretion ATPase)
gi|4324347|gb|AAD16824.1| ATPase YscN [Yersinia enterocolitica]
Length = 439
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 203/418 (48%), Positives = 263/418 (62%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
I+ GRV +V L+++ P +GELC + DN L+AEV+G L+ ++
Sbjct: 21 IQIRGRVTQVTGTLLKAVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMY 80
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ V +G + V VG LLG+V+D L + DG P A YPV P M+RK
Sbjct: 81 GISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRK 140
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + GIR ID LL G GQR+GIFA G GKSTLL + R+ DV V+ALIGERG
Sbjct: 141 LITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 200
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +FIE DLG EGL+ +V+V ATSD+ ++ R + + AT+IAEYFRDQGK V+LL DS
Sbjct: 201 REVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDS 260
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
VTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S KGSIT YTVLVEGDDM
Sbjct: 261 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSKGSITALYTVLVEGDDM 320
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ K + +R LL
Sbjct: 321 TEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLL 380
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
Y E E ++ +G YQKG D AI+ I +L Q + + +TL L +T
Sbjct: 381 AKYEEVELLLQIGEYQKGQDKEADQAIERIGAIRGWLCQGTHELSHFNETLNLLETLT 438
>gi|152986739|ref|YP_001349621.1| flagellar protein export ATPase FliI [Pseudomonas aeruginosa PA7]
gi|150961897|gb|ABR83922.1| flagellar protein export ATPase FliI [Pseudomonas aeruginosa PA7]
Length = 451
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 206/434 (47%), Positives = 285/434 (65%), Gaps = 4/434 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDD--NPDGLKAEVVG 62
+ YTNAVS GR++R+ +E+EG A+VG C +I + +P ++AEV+G
Sbjct: 12 LEGYTNAVSLPAQPVVEGRLLRMVGLTLEAEGLQAAVGSRCNVINESGYHPVQVEAEVMG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+G+ V LM + G+ G V+ + +P+G +LGRV+D ++ DGK +
Sbjct: 72 FSGSKVYLMPVGSLAGIAPGARVVPLPDTGRLPMGMSMLGRVLDGAGRALDGKGGMRAED 131
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
P+ + + R PI + + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R
Sbjct: 132 WVPMDGPTINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRF 191
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T AD+ V+ LIGERGREV +FI+ LG EGLK SV+V++ +D + L R+R A T IAE
Sbjct: 192 TRADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAE 251
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRD+GK+V+LL DS+TR+A AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +E
Sbjct: 252 YFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAG 311
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT FYTVL EGDD +PI+DA RG+LDGH VL R LAE G YPA+++ SISR+ +
Sbjct: 312 GGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQ 371
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V P ++R + L Y +S D+I++GAY G A D AI +P + FL Q +D+
Sbjct: 372 VVEPGHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDAETDLAIARFPAMRQFLRQALDE 431
Query: 421 PAKLKDTLQKLSDI 434
L D+ +L+ +
Sbjct: 432 SESLADSRARLASL 445
>gi|21230693|ref|NP_636610.1| type III secretion system ATPase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769312|ref|YP_244074.1| type III secretion system ATPase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21112282|gb|AAM40534.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66574644|gb|AAY50054.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 442
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 199/413 (48%), Positives = 274/413 (66%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+VV V +++ G S+GE+C++ D +AEVVG + T+ L + ++ G+
Sbjct: 26 GKVVEVIGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRTLALLAPFGELVGLSR 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
VI G L+VPVG+ LLGRV+D L + ADG+ + A PD M R+ I Q
Sbjct: 86 QTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPLAGDDWVQIQAQAPDPMRRRLIEQ 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T DVNVI LIGERGREV
Sbjct: 146 PLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLIGMFARGTQCDVNVIVLIGERGREVR 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LGP+GL SV+V ATSD+S++ R + AY TAIAEYFRD+G V+L+ DS+TRF
Sbjct: 206 EFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGMRVLLMMDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPP RG+ PSVF+ LP+LLER+G E GSIT FYTVL E D ++PI
Sbjct: 266 ARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGETGSITAFYTVLAEDDTGSDPI 325
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A R QYPA++VL S+SR+ +++ + + ++R LL +
Sbjct: 326 AEEVRGILDGHLILSREIAARNQYPAIDVLGSLSRVMSQIVSAEQRQYAGQLRRLLAKHN 385
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E ++ +G Y+ GS A D+AI I DFL+Q D + L++L+ +
Sbjct: 386 EVETLLQVGEYRHGSDAVADEAIARIDAIRDFLSQPTDQLSDYDTILEQLAGV 438
>gi|32477553|ref|NP_870547.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
gi|32448107|emb|CAD77624.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
Length = 467
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 205/413 (49%), Positives = 274/413 (66%), Gaps = 1/413 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GRV V + +G A +G +C+++ D L A V+G + T L + +
Sbjct: 34 GRVASVTGDAVTVQGMTAPLGAICELMPPDAKPTL-ARVIGFDDTRPILAPMEAISALAA 92
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
GD V L++ VG+ L GRV+DA + DGKP R + PD++ R PI +
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDE 152
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+RAID++L G GQRLGIFAG+G+GKSTLLGM+ R T AD VIA++GERGREV
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGMLTRGTTADRIVIAMVGERGREVQ 212
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F++ LG GLK SV+V ATSD+ A R+ A+TATAIAE FRD+G V+LL DSVTRF
Sbjct: 213 EFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEKFRDEGHRVLLLVDSVTRF 272
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
AMAQRE+GLA GEPP TRGY PSVF+ LP+L+ER+G + KGSIT FYTVLVEGDD NEPI
Sbjct: 273 AMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGRTTKGSITAFYTVLVEGDDNNEPI 332
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
SD VRG+LDGHIVL+R LA RG YP +++ +SISR++N + P T A+ +R + Y
Sbjct: 333 SDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETYQATLGIREHMVQYQ 392
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
SED+I++GAY+ GS +D AI I D L Q+ ++ + D+ ++ +
Sbjct: 393 TSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQDANEITPIADSQARVQKL 445
>gi|116327838|ref|YP_797558.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116330720|ref|YP_800438.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116120582|gb|ABJ78625.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116124409|gb|ABJ75680.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 454
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 206/445 (46%), Positives = 292/445 (65%), Gaps = 2/445 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVAS-VGELCQIITDDNPDGLKAEV 60
+D+ KY + T+ I+ +G+V+RV +I SEGP S +GEL + L+ E+
Sbjct: 10 IDVMSKYFLIMDRTETIRKSGKVIRVSGNVIYSEGPPDSKIGELMDVQKSGKEGYLQCEI 69
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG G + LM ++G+ V +SG L++PVG LLGRV++ + + D K +
Sbjct: 70 VGFEGHVYTLMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHIIT 129
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ P+ + R IR ++TG+RAID +L +GRGQR+GIF+G+G+GKS+LLGMIA
Sbjct: 130 KEERGPDNDVPNPLDRPIIRDILMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIA 189
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R TNAD+NVIAL+GERGREV +FIE DLG EGL+ SV+++ATSD + ++ A AT+I
Sbjct: 190 RYTNADINVIALVGERGREVNEFIEIDLGKEGLQKSVVLAATSDAPKMEQVNCALLATSI 249
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V L+ DS+TRFA A REI + EPP TRG++ SVFS L KL+ERSGTS+
Sbjct: 250 AEYFRDQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTSK 309
Query: 301 K-GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
G+ITGFYTVL E D+M +PI+DAVRG +DGHIVL+R LAE+ YPA++V S+SR+
Sbjct: 310 SGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIVLNRKLAEKNHYPAIDVPASLSRVMA 369
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
R++ N + +R L+ Y +E++I L AY GS + +D AI +I +L Q++
Sbjct: 370 RIAPENQNLRAGMIRELISVYDSAEELIRLNAYVSGSDSRVDLAIRKKDKIDRYLKQKIQ 429
Query: 420 DPAKLKDTLQKLSDITGIDIPPEEF 444
+ + +Q L +I + EEF
Sbjct: 430 ERSTYSKAVQGLKEILEDEQEKEEF 454
>gi|24215292|ref|NP_712773.1| flagellum-specific ATP synthase fliI [Leptospira interrogans
serovar Lai str. 56601]
gi|45657268|ref|YP_001354.1| FliI [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|24196389|gb|AAN49791.1|AE011426_6 flagellum-specific ATP synthase fliI [Leptospira interrogans
serovar Lai str. 56601]
gi|45600506|gb|AAS69991.1| FliI [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 454
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 203/432 (46%), Positives = 286/432 (66%), Gaps = 2/432 (0%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVAS-VGELCQIITDDNPDGLKAEV 60
VD+ KY + T+ I+ +G+V+RV +I SEGP S +GEL + L+ E+
Sbjct: 10 VDVMSKYFLIMDRTETIRKSGKVIRVSGNVIYSEGPPDSKIGELMDVQKSGKEGYLQCEI 69
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG G + LM ++G+ V +SG L++PVG LLGRV++ + + D K +
Sbjct: 70 VGFEGHVYTLMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHIIT 129
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ P P+ + R IR ++TG+RAID +L +GRGQR+GIF+G+G+GKS+LLGMIA
Sbjct: 130 KEERPPDNEVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIA 189
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R T+AD+NVIAL+GERGREV +FIE DLG EGLK SV+++ATSD + ++ A AT+I
Sbjct: 190 RYTDADINVIALVGERGREVNEFIEIDLGKEGLKKSVVLAATSDAPKMEQVNCALLATSI 249
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRDQGK V L+ DS+TRFA A REI + EPP TRG++ SVFS L KL+ERSGTS+
Sbjct: 250 AEYFRDQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTSK 309
Query: 301 K-GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSN 359
G+ITGFYTVL E D+M +PI+DAVRG +DGHI+L+R LAE+ YPA++V S+SR+
Sbjct: 310 SGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAIDVPASLSRVMA 369
Query: 360 RVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD 419
R++ + + +R L+ Y +E++I L AY GS +D AI +I +L Q++
Sbjct: 370 RIAPEDQNLRAGMIRELISVYNSAEELIRLNAYVSGSDPKVDLAIRKKDKIDRYLKQKIQ 429
Query: 420 DPAKLKDTLQKL 431
+ + LQ L
Sbjct: 430 ERSTYSHALQGL 441
>gi|27377312|ref|NP_768841.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
gi|27350455|dbj|BAC47466.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
Length = 441
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 206/429 (48%), Positives = 282/429 (65%), Gaps = 5/429 (1%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPV--ASVGELCQIITDDNPDGLKAEVVGLNGTIVQ 69
+ + D + GRVV V ++E GP+ SVG I T N + EV+G +G
Sbjct: 8 IGDIDGVNIYGRVVGVRGLMVEVAGPIHAMSVGARLVIETGAN-RSIPCEVIGFSGNNAV 66
Query: 70 LMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVA 128
+M + + GV+ G + + V LGRVV+AL + DGK P P + P
Sbjct: 67 VMPFAGLDGVRRGCKAVIANAANQVRPSTAWLGRVVNALGEPIDGKGPLPQGSSPMPFRN 126
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
+PP A +RK + + G+RA+++ L RGQR+GIFAG+G+GKS LL M+ARN +A V+
Sbjct: 127 TPPPAHSRKRVGSPLDLGVRAMNTFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVS 186
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
VI LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY A+AEYFRD+
Sbjct: 187 VIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDED 246
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGF 307
KDV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+IT
Sbjct: 247 KDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLGEGAITAI 306
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
+TVLV+GDD NEPI+DAVRGILDGHIV+ R++AERG+YPA+N+LKS+SR + + P
Sbjct: 307 FTVLVDGDDHNEPIADAVRGILDGHIVMQRSIAERGRYPAINILKSVSRTMPKSADPEFW 366
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
++ R ++ Y + E++I LGAY+ GSS +D+AI + + FL Q D+ A L D
Sbjct: 367 PTIQKARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLEGFLRQRKDENASLADG 426
Query: 428 LQKLSDITG 436
++L+ I G
Sbjct: 427 YRQLAQILG 435
>gi|119856733|ref|ZP_01638165.1| Flagellar protein export ATPase FliI [Pseudomonas putida W619]
gi|119817074|gb|EAX19818.1| Flagellar protein export ATPase FliI [Pseudomonas putida W619]
Length = 517
Score = 371 bits (952), Expect = e-101, Method: Composition-based stats.
Identities = 202/417 (48%), Positives = 276/417 (66%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNGTIVQLMSYTDVQGV 79
GR++R+ +E+EG A VG C +I DD+ P ++AEV+G G+ + LM + G+
Sbjct: 94 GRLLRMVGLTLEAEGLRAPVGARCLVINDDSYHPVQVEAEVMGFAGSKIFLMPVGSIAGI 153
Query: 80 KIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPI 139
G V+ + +P+G +LGRV+D ++ DGK + P+ + + R PI
Sbjct: 154 APGARVVPLDDSGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPIINPLNRDPI 213
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
Q + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A++ V+ LIGERGRE
Sbjct: 214 SQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAEIIVVGLIGERGRE 273
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
V +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFRD+GK+V+LL DS+T
Sbjct: 274 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 333
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDM 317
RFA AQREI LAIGEPPATRGY PSVF+ LPKL+ER+G E GSIT FYTVL EGDD
Sbjct: 334 RFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGGSITAFYTVLSEGDDQ 393
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
+PI+D+ RG+LDGH VL R LAE G YPA+++ SISR+ +V N +++ + L
Sbjct: 394 QDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVDANHLRQAQKFKQLW 453
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++S D+I++GAY G D AI P++ DFL Q +D+ + + Q+L I
Sbjct: 454 SRLSQSRDLISVGAYVAGGDPETDLAIALQPKLVDFLRQGLDENVGMDQSRQQLGAI 510
>gi|388096|gb|AAA20119.1| yscN
gi|392946|gb|AAA73398.1| YscN
Length = 439
Score = 370 bits (951), Expect = e-101, Method: Composition-based stats.
Identities = 201/418 (48%), Positives = 261/418 (62%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
I+ GRV +V L+++ P +GELC + DN L+AEV+G L+ ++
Sbjct: 21 IQIRGRVTQVTGTLLKAVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMY 80
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ V +G + V VG LLG+V+D L + DG P A YPV P M+RK
Sbjct: 81 GISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRK 140
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
I + GIR ID LL G GQR+GIFA G GKSTLL + R+ DV V+ALIGERG
Sbjct: 141 LITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 200
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
EV +FIE DLG EGL+ + +V ATSD+ ++ R + + AT+IAEYFRDQGK V+LL DS
Sbjct: 201 PEVREFIESDLGEEGLRKAFLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDS 260
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDM 317
VTRFA AQREIGLA GEPP RGY PSVF++LP+L+ER+G S KGSIT YTVLVEGDDM
Sbjct: 261 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSKGSITALYTVLVEGDDM 320
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
EP++D R ILDGHI+L R LA YPA++VL+S SR+ N++ K + +R LL
Sbjct: 321 TEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGHLRRLL 380
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT 435
Y E E ++ +G YQKG D AI+ I +L Q + + +TL L +T
Sbjct: 381 AKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSHFNETLNLLETLT 438
>gi|70729033|ref|YP_258767.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf-5]
gi|68343332|gb|AAY90938.1| flagellum-specific ATP synthase FliI [Pseudomonas fluorescens Pf-5]
Length = 452
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 204/421 (48%), Positives = 277/421 (65%), Gaps = 4/421 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNG 65
Y AVS GR++R+ +E+EG A++G C +I DD+ P ++AEV+G +G
Sbjct: 15 YAQAVSLPGQPILEGRLLRMVGLTLEAEGLRAAMGTRCMVINDDSYHPVKVEAEVMGFSG 74
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
+ V LM V G+ G V+ + +P+G +LGRV+D ++ DGK + P
Sbjct: 75 SKVFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGAMRAEDWVP 134
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
+ + + R PI Q + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A
Sbjct: 135 MDGPTINPLKRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEA 194
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
D+ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFR
Sbjct: 195 DIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFR 254
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GS 303
D+GK+V+LL DS+TRFA AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +E GS
Sbjct: 255 DKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGS 314
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVL EGDD +PI+D+ RG+LDGHIVL R LAE G YPA+++ SISR+ V
Sbjct: 315 ITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVIS 374
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P+ ++ + L Y ++ D+I++GAY G D AI +P + +L Q ++D
Sbjct: 375 PDNMARAQYFKQLWSRYQQARDLISVGAYVAGGDRDTDTAISLHPAMVAYLRQGLNDNIS 434
Query: 424 L 424
L
Sbjct: 435 L 435
>gi|83747851|ref|ZP_00944884.1| HrcN [Ralstonia solanacearum UW551]
gi|83725498|gb|EAP72643.1| HrcN [Ralstonia solanacearum UW551]
Length = 439
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 200/431 (46%), Positives = 271/431 (62%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + +A I+ G+VV V L+ G +GELC + D + EVVG
Sbjct: 6 LLESLESAARTAPLIRRFGKVVEVTGTLLRVGGVDVRLGELCTLTEADGTVMQEGEVVGF 65
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ + ++ V G+ V+ SG LSV +G LLGRV+D L + ADG P +
Sbjct: 66 SEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLDVVEH 125
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV A+ PD MTR+ + + TG+R ID L + GQR+GIFA G+GKSTL+GM AR T
Sbjct: 126 VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMFARGT 185
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DVNVI LIGERGREV +FIE LG EG++ SV+V ATSD+SA+ R + A+ TA+AEY
Sbjct: 186 ECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAHVGTAVAEY 245
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG V+L+ DS+TRFA AQREIGLA GEPP RG+ PSVF+ LP+LLER+G S GS
Sbjct: 246 FRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMSSAGS 305
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVL E + N+P+++ VRGILDGH++L R++A R +YPA+++L S+SR+ +V
Sbjct: 306 ITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRVMTQVMP 365
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
DA+ RMR LL Y E E ++ +G Y++GS D A+ + FL Q D+
Sbjct: 366 REHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMEGFLRQRTDEWCS 425
Query: 424 LKDTLQKLSDI 434
+T + L +I
Sbjct: 426 PDETRRLLDEI 436
>gi|77457766|ref|YP_347271.1| flagellum-specific ATP synthase [Pseudomonas fluorescens PfO-1]
gi|77381769|gb|ABA73282.1| ATPase FliI/YscN [Pseudomonas fluorescens PfO-1]
Length = 452
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 203/417 (48%), Positives = 277/417 (66%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDD--NPDGLKAEVVGLNGTIVQLMSYTDVQGV 79
GR++R+ +E+EG A++G C +I DD +P ++AEV+G +G+ V LM V G+
Sbjct: 29 GRLLRMVGLTLEAEGLRAAMGTRCMVINDDTYHPSQVEAEVMGFSGSKVFLMPVGSVAGI 88
Query: 80 KIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPI 139
G V+ + +P+G +LGRV+D ++ DGK + P+ + + R PI
Sbjct: 89 APGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPTINPLNRDPI 148
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
+ GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T AD+ V+ LIGERGRE
Sbjct: 149 SVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGRE 208
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
V +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFRD+GK+V+LL DS+T
Sbjct: 209 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 268
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDM 317
RFA AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +EK GSIT FYTVL EGDD
Sbjct: 269 RFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSITAFYTVLSEGDDQ 328
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
+PI+D+ RG+LDGHIVL R LAE G YPA+++ SISR+ V P ++ + L
Sbjct: 329 QDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVAPEHMQRAQYFKQLW 388
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
Y +S D+I++GAY G D AI+ P++ +L Q ++D L ++ L I
Sbjct: 389 SRYQQSRDLISVGAYVAGGDRETDLAINLQPQLVRYLRQGLNDKISLGESEAYLETI 445
>gi|83646016|ref|YP_434451.1| Flagellar biosynthesis/type III secretory pathway ATPase [Hahella
chejuensis KCTC 2396]
gi|83634059|gb|ABC30026.1| Flagellar biosynthesis/type III secretory pathway ATPase [Hahella
chejuensis KCTC 2396]
Length = 448
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 195/423 (46%), Positives = 274/423 (64%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71
V + D + GRV + ++++ +GE+C+++ ++ + AEV+G + L
Sbjct: 23 VEQADFSQVRGRVTQAVGTIVKASVNGVRIGEICELVDPESQRSILAEVIGFSRQEALLT 82
Query: 72 SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPP 131
++++G+ VI +G + + +LGRV+D L D YP++++ P
Sbjct: 83 PLSEMEGLSAHTEVIPTGRSHEIQISEGILGRVLDGLGAPIDDGEPLTGGVPYPIISASP 142
Query: 132 DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIA 191
+ +TR+ + + TG+RAID +L G GQR+G+FA G+GKSTLL MI R+T+AD+ VI
Sbjct: 143 NPLTRRLVETPMTTGVRAIDGMLTCGEGQRMGVFAAAGVGKSTLLSMITRHTDADIVVIG 202
Query: 192 LIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDV 251
LIGERGREV FIE DLG EG++ +V+V+ATSD+ A+ R++ Y ATAIAE+FRDQGK V
Sbjct: 203 LIGERGREVRGFIERDLGAEGMQRAVVVAATSDRPAMERVKAGYVATAIAEHFRDQGKRV 262
Query: 252 MLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVL 311
+LL DSVTRFA A REIGLA GEPPA RG+ P+VF++LPKLLER+G KG+I+ YTVL
Sbjct: 263 LLLIDSVTRFARALREIGLAAGEPPARRGFPPTVFATLPKLLERAGPGAKGAISALYTVL 322
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
VEGDDM EP++D VR ILDGHIVL R LAE G +PAV++L S SRL N ++ P ++
Sbjct: 323 VEGDDMTEPVADEVRSILDGHIVLSRALAESGHFPAVDILASSSRLMNDIATPEQLQQAR 382
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
R+R LL Y E E ++ +G YQ G+ D AI I FL Q P + DTL +L
Sbjct: 383 RLRQLLARYKEIELLVRIGEYQPGTDPLADAAIKAIEPINQFLRQHDGAPCSMADTLAQL 442
Query: 432 SDI 434
+
Sbjct: 443 QSL 445
>gi|124265761|ref|YP_001019765.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
gi|124258536|gb|ABM93530.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
Length = 487
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 204/443 (46%), Positives = 286/443 (64%), Gaps = 23/443 (5%)
Query: 17 PIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDV 76
P++ G +VRV ++E+ G VG +C++ D P L AEVVG LM ++
Sbjct: 46 PLEAQGTLVRVAGLVLEAAGIRVPVGSVCEVRMDGQPPVL-AEVVGFAADRAYLMPTGEL 104
Query: 77 QGVKIGDLVI--------------------ASGEILSVPVGNILLGRVVDALCKSADGKP 116
G+ G V+ + +P+G+ LLGRV+D L D
Sbjct: 105 HGLASGARVVPRSTPSVAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPLDRLG 164
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
+ + P+V P +AM R P+R+ + TG+RAI+++L VGRGQR+G+FAG+G+GKS LL
Sbjct: 165 PIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLL 224
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+A+ T ADV V+ LIGERGREV +FIE LG EGLK S++V+A +D L R++GA
Sbjct: 225 GMMAKYTAADVIVVGLIGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAY 284
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
ATAIAE+FRD+G+ V+LL DS+TR+AMAQREI LAIGEPPAT+GY PS F+ LP+L+ERS
Sbjct: 285 ATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERS 344
Query: 297 GTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G GSIT FYTVL EGDD +PI+DA R ILDGHIVL R+LAE G YPA+++ +S
Sbjct: 345 GNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDIERSA 404
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR+ + V+ P A++R+R L Y ++ D+I LGAY G +D A+ + + L
Sbjct: 405 SRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLL 464
Query: 415 TQEVDDPAKLKDTLQKLSDITGI 437
Q++ D ++L D++++L +TGI
Sbjct: 465 QQDMHDASRLTDSVRQLRQLTGI 487
>gi|148359301|ref|YP_001250508.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Corby]
gi|1938361|gb|AAB52239.1| nucleotide binding protein FliI [Legionella pneumophila]
gi|148281074|gb|ABQ55162.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Corby]
Length = 449
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 204/415 (49%), Positives = 274/415 (66%), Gaps = 3/415 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ R IE++G VG C + +D ++AEVVG + V LMS D+QG+
Sbjct: 27 GRISRAIGLTIEAKGFNQPVGARCLVKINDE-HSVQAEVVGFSNESVYLMSIGDIQGIAP 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +I +G I V VG+ LLGR+++ D P + YP++ + + R PI
Sbjct: 86 GMKIIPTGRIAQVSVGHQLLGRILNGSGMFIDDGPPGEMVETYPLIGQVINPLKRAPIEV 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIRAI+ LL VGRGQR+G+FAG+G+GKS LLGM+ R T ADV V+ LIGERGREV
Sbjct: 146 PLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVK 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE +LG EGL+ +V+V+A +D+S L R+ GA AT+IAEYFRDQGK V+LL DS+TRF
Sbjct: 206 EFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVATSIAEYFRDQGKHVLLLIDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI L+IGE PAT+GY PSVF+ LPKL+ER+ GTS GSIT FYTVL EGDD+ +
Sbjct: 266 AQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGTSGGGSITAFYTVLTEGDDLQD 325
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGH+VL R LAE+GQYPA+++ SISR+ V + L
Sbjct: 326 PIADAARAILDGHVVLSRALAEQGQYPAIDLEASISRVMQGVVSEQHMKDMLLFKKYLSV 385
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
Y +++D+I LGAY KGS +D AI ++ D+L Q +D+ ++L L+ +
Sbjct: 386 YEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQGMDEQVSYDESLSSLTKL 440
>gi|52841984|ref|YP_095783.1| nucleotide binding protein FliI [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629095|gb|AAU27836.1| nucleotide binding protein FliI [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 450
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 204/415 (49%), Positives = 274/415 (66%), Gaps = 3/415 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ R IE++G VG C + +D ++AEVVG + V LMS D+QG+
Sbjct: 28 GRISRAIGLTIEAKGFNQPVGARCLVKINDE-HSVQAEVVGFSNESVYLMSIGDIQGIAP 86
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +I +G I V VG+ LLGR+++ D P + YP++ + + R PI
Sbjct: 87 GMKIIPTGRIAQVSVGHQLLGRILNGSGMFIDDGPPGEMVETYPLIGQVINPLKRAPIEV 146
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIRAI+ LL VGRGQR+G+FAG+G+GKS LLGM+ R T ADV V+ LIGERGREV
Sbjct: 147 PLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVK 206
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE +LG EGL+ +V+V+A +D+S L R+ GA AT+IAEYFRDQGK V+LL DS+TRF
Sbjct: 207 EFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVATSIAEYFRDQGKHVLLLIDSLTRF 266
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI L+IGE PAT+GY PSVF+ LPKL+ER+ GTS GSIT FYTVL EGDD+ +
Sbjct: 267 AQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGTSGGGSITAFYTVLTEGDDLQD 326
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGH+VL R LAE+GQYPA+++ SISR+ V + L
Sbjct: 327 PIADAARAILDGHVVLSRALAEQGQYPAIDLEASISRVMQGVVSEQHMKDMLLFKKYLSV 386
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
Y +++D+I LGAY KGS +D AI ++ D+L Q +D+ ++L L+ +
Sbjct: 387 YEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQGMDEQVSYDESLSSLTKL 441
>gi|6066711|emb|CAB58257.1| HrpE protein [Ralstonia solanacearum]
gi|1097290|prf||2113360R hrpE gene
Length = 439
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 200/431 (46%), Positives = 271/431 (62%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L D +A T I+ G+VV V L+ G +GELC + D + EVVG
Sbjct: 6 LLDSLESAARTTPLIRRFGKVVEVSGTLLRVGGVDVRLGELCTLTEADGTVMQEGEVVGF 65
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ + ++ V G+ V+ SG LSV +G LLGRV+D + ADG P +
Sbjct: 66 SEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGHGRPADGGPPLDVVEY 125
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
PV A+ PD MTR+ + + TG+R ID L + GQR+GIFA G+GKSTL+GM AR T
Sbjct: 126 VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMFARGT 185
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
DVNVI LIGERGREV +FIE LG EG++ SV+V ATSD++A+ R + AY TA+AEY
Sbjct: 186 ECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRTAVERAKAAYVGTAVAEY 245
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FRDQG V+L+ DS+TRFA AQREIGLA GEPP RG+ PSVF+ LP+LLER+G S GS
Sbjct: 246 FRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMSAAGS 305
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT YTVL E + N+P+++ VRGILDGH++L R++A R +YPA+++L S+SR+ +V
Sbjct: 306 ITAHYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRVMTQVMP 365
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
+ DA+ RMR LL Y E ++ +G Y++GS D A+ + FL Q D+
Sbjct: 366 RDHCDAAGRMRQLLAKYNEVVTLLQMGEYKEGSDPVADAAVQWNDWMESFLRQRTDEWCS 425
Query: 424 LKDTLQKLSDI 434
+T + L +I
Sbjct: 426 PDETRRLLDEI 436
>gi|54307262|ref|YP_128282.1| Putative FliI, flagellum-specific ATP synthase [Photobacterium
profundum SS9]
gi|46911682|emb|CAG18480.1| Putative FliI, flagellum-specific ATP synthase [Photobacterium
profundum SS9]
Length = 446
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 195/423 (46%), Positives = 280/423 (66%), Gaps = 4/423 (0%)
Query: 17 PIKFT-GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
PI T GR+ R+ +E+ G G+ C I TD ++AEVVG + LM
Sbjct: 23 PIARTYGRLTRMAGLTLEAVGCRLCTGQRCMIETDHGTL-VEAEVVGFDRNASVLMPIRH 81
Query: 76 VQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMT 135
G++ G V + VG +LGRV++ L + D + + +R + + +
Sbjct: 82 TTGLRPGSRVFPLHGDSKINVGYSMLGRVLNGLGEPLDSRGPITADQRINLQGETINPLQ 141
Query: 136 RKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGE 195
R PI ++ G+R I+S+L+VG+GQR+G+FAG+G+GKS LLGM+ RNT A++ V+ LIGE
Sbjct: 142 RLPISTQLDVGVRVINSMLSVGKGQRMGLFAGSGVGKSVLLGMMTRNTTAEITVVGLIGE 201
Query: 196 RGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLF 255
RGREV +FIEH LGPEG+K++V++++ +D L R+R + IAE+FRDQG DV+LL
Sbjct: 202 RGREVREFIEHSLGPEGMKNAVVIASPADDPPLMRLRASMLCHRIAEFFRDQGHDVLLLM 261
Query: 256 DSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVE 313
DS+TR+A AQREI LA+GEPPAT+GY PSVFS LP+L+ER+ G +EKGSIT FYTVL E
Sbjct: 262 DSLTRYAQAQREIALAVGEPPATKGYPPSVFSMLPQLVERAGNGATEKGSITAFYTVLSE 321
Query: 314 GDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRM 373
GDD +PI+DA R ILDGHIVL+R LAE+G YPA+++ +SISR +V P ++++
Sbjct: 322 GDDQQDPIADAARAILDGHIVLNRELAEQGHYPAIDIEQSISRAMPQVVTPEQLQKAQQV 381
Query: 374 RTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSD 433
+ L Y + +D+I+LG YQ+G +D A+ +YP I DFL Q +++ L D+ Q+L
Sbjct: 382 KQLYARYRQVQDLISLGGYQQGQDQNLDMAVHYYPEICDFLQQGMNERVLLADSQQQLMQ 441
Query: 434 ITG 436
+TG
Sbjct: 442 LTG 444
>gi|104782818|ref|YP_609316.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48]
gi|95111805|emb|CAK16529.1| flagellum-specific ATP synthase [Pseudomonas]
Length = 451
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 206/441 (46%), Positives = 286/441 (64%), Gaps = 7/441 (1%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVG 62
+ Y +A+ D GR++R+ +E+EG A+VG C +I DD+ P ++AEV+G
Sbjct: 12 LEGYADAIRLPDQPVVEGRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPVQVEAEVMG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+G V LM + G+ G V+ + +P+G +LGRV+D ++ DGK +
Sbjct: 72 FSGDKVFLMPVGSIAGLAPGARVVPLDDSGRLPMGMSMLGRVLDGAGRALDGKGGMKAED 131
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
P+ + + R PI Q + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+
Sbjct: 132 WVPMDGPVINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTCF 191
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T A++ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D + L R+R A T IAE
Sbjct: 192 TEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAE 251
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRD+GK+V+LL DS+TRFA AQREI LAIGEPPATRGY PSVF+ LPKL+ER+G E
Sbjct: 252 YFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPG 311
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT FYTVL EGDD +PI+D+ RG+LDGH VL R LAE G YPA+++ SISR+ +
Sbjct: 312 GGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQ 371
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V P+ +++ + L ++S D+I++GAY G D AI P++ DFL Q +D+
Sbjct: 372 VVDPDHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDVETDLAIALQPKLVDFLRQGLDE 431
Query: 421 PAKLKDTLQKLSDITGIDIPP 441
+ + ++L I +PP
Sbjct: 432 NVGMAQSREELG---AIFVPP 449
>gi|77979919|ref|ZP_00835335.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia intermedia ATCC 29909]
Length = 455
Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats.
Identities = 203/440 (46%), Positives = 282/440 (64%), Gaps = 10/440 (2%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNP--DGLKAEVVG 62
DK+ +S++ I+ GR+ R ++E+ G +G C I DN +++EVVG
Sbjct: 13 LDKFEERISQSTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHDNGTVQEVESEVVG 72
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKP 116
NG + LM +V+G+ G V A + +P+G LLGRV+D K DG P
Sbjct: 73 FNGQRLFLMPLEEVEGIVPGARVYARVTTGGASASKQLPLGPELLGRVLDGSAKPLDGLP 132
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
P ++ R P++ P + + R I Q + G+R I++LL VGRGQR+G+FAG+G+GKS LL
Sbjct: 133 APETSYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLL 192
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+AR T ADV V+ LIGERGREV DFIE+ LGPEG SV+++A +D S L R++GA
Sbjct: 193 GMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLRMQGAAY 252
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312
Query: 297 --GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G YPA+++ SI
Sbjct: 313 GNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASI 372
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR + N ++ + LL Y + D++++GAY GS +D AI YP++ FL
Sbjct: 373 SRAMTSLIDENHYSQVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFL 432
Query: 415 TQEVDDPAKLKDTLQKLSDI 434
Q + + + +D Q L +
Sbjct: 433 QQGMFERSSYEDACQHLKSL 452
>gi|126665012|ref|ZP_01735995.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
gi|126630382|gb|EBA00997.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
Length = 479
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 206/432 (47%), Positives = 276/432 (63%), Gaps = 3/432 (0%)
Query: 19 KFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQG 78
+ GR+ R+ +E G VG+ C +I ++AEVVG V LM T ++G
Sbjct: 39 ELAGRLTRMVGLTLECVGVPMVVGDRC-VIQSQGSSVVEAEVVGFEDEKVYLMPLTAIEG 97
Query: 79 VKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKP 138
++ G LV+ VPVGN LLGRVVD + DGK ++ R + + + R P
Sbjct: 98 LRPGALVVPLSSTSRVPVGNQLLGRVVDGSGEPLDGKGPLHAEARVSLSGDIINPLNRAP 157
Query: 139 IRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGR 198
+RQ + GIRAI++LL VG+GQRLG+FAG+G+GKS LLGM+ R TNADV V+ LIGERGR
Sbjct: 158 VRQPMDVGIRAINALLTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADVTVVGLIGERGR 217
Query: 199 EVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSV 258
EV +FIE LG EGL SV+V++ +D S L R+R A T IAE++RDQGK V+LL DS+
Sbjct: 218 EVKEFIEDILGEEGLARSVVVASPADDSPLMRLRAAMLTTRIAEFYRDQGKRVLLLMDSL 277
Query: 259 TRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDD 316
TR+A AQREI LA+GEPPAT+GY PSVF+ LP+L+ER+G GSIT FYTVL EGDD
Sbjct: 278 TRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDD 337
Query: 317 MNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTL 376
+PI+DA R ILDGHIVL R LAE G YPA++V SISR+ +V+ P ++R + +
Sbjct: 338 QQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTEPEHFARAQRFKQV 397
Query: 377 LKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y ++ D+I++GAY KGS D AI H + FL Q + + L D++++L +
Sbjct: 398 YSRYQQARDLISVGAYVKGSDPETDFAIAHIANMRQFLKQGLSEKTSLNDSVEQLLAVVP 457
Query: 437 IDIPPEEFDEAG 448
PE A
Sbjct: 458 ERRSPERMQVAA 469
>gi|71906409|ref|YP_283996.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
gi|71846030|gb|AAZ45526.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
Length = 472
Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats.
Identities = 208/449 (46%), Positives = 287/449 (63%), Gaps = 25/449 (5%)
Query: 9 TNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIV 68
+ A S P+ GR+ R++ ++E+ G +G C+I ++AEVVG G +
Sbjct: 25 STAASNAQPLWPVGRLTRINGLVMEAAGLKLPLGSTCKIYPSSGIP-IEAEVVGFAGEKL 83
Query: 69 QLMSYTDVQGVKIGDLVIA--SGEILSV------------------PVGNILLGRVVDAL 108
LM DV G+ G V+A S +L PVG LLGRV+D +
Sbjct: 84 YLMPSDDVYGLAPGSKVVAVESPNMLPKLGGPPPFRRRAIDRAKQGPVGEELLGRVLDGV 143
Query: 109 CKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGT 168
+ D K +A+ P+ + P + M+R I Q + GIRAI++LL VGRGQR+G+FAG+
Sbjct: 144 GRPLDNKGPLIAAETRPLQSRPINPMSRAAIHQPLDVGIRAINALLTVGRGQRMGLFAGS 203
Query: 169 GIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSAL 228
G+GKS LLGM+AR T A+V V+ LIGERGREV +FIE LG EG++ SV+V+A +D L
Sbjct: 204 GVGKSVLLGMMARYTEAEVIVVGLIGERGREVKEFIEQILGEEGMRRSVVVAAPADTGPL 263
Query: 229 ARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSS 288
R++GA AT IAEYFRDQGK V+L+ DS+TR+AMAQREI LAIGEPPATRGY PSVF+
Sbjct: 264 MRLQGAAYATTIAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATRGYPPSVFAR 323
Query: 289 LPKLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYP 346
LP+L+ER+G ++ GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LA+ G YP
Sbjct: 324 LPQLVERAGNGQEGGGSITAFYTVLAEGDDQQDPIADSARAILDGHIVLSRTLADAGHYP 383
Query: 347 AVNVLKSISR-LSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAID 405
A+++ +SISR + N + P+ D ++ + L Y S D+I++GAY GS +D AI
Sbjct: 384 AIDIEQSISRAMVNLIDAPHL-DQIRKFKVLFARYQRSRDLISVGAYAPGSDPVLDQAIS 442
Query: 406 HYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
YPR+ FL Q++ + + +L+ L +
Sbjct: 443 LYPRMESFLQQQLIEQSDFPSSLEALKTL 471
>gi|86751019|ref|YP_487515.1| ATPase FliI/YscN [Rhodopseudomonas palustris HaA2]
gi|86574047|gb|ABD08604.1| ATPase FliI/YscN [Rhodopseudomonas palustris HaA2]
Length = 441
Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats.
Identities = 198/426 (46%), Positives = 279/426 (65%), Gaps = 3/426 (0%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVGLNGTIVQL 70
+ + D + GRVV V ++E GP+ ++ +I+ + D + EV+G G +
Sbjct: 8 IGDIDGVNIYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGGDRNIPCEVIGFTGNNAMV 67
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVAS 129
M + ++GV+ G + + V LGRV++AL + DGK P P +
Sbjct: 68 MPFAGLEGVRRGCRAVIANSAAQVRPSQAWLGRVINALGEPIDGKGPLPQGPSPMRFRNT 127
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP A +RK + + G+RA+++ L RGQR+GIFAG+G+GKS LL M+ARN +A V+V
Sbjct: 128 PPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSV 187
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
I LIGERGREV +F++ DLG EG+ SV+V ATSD+ AL R + AY +IAEYFRD+ K
Sbjct: 188 IGLIGERGREVQEFLQDDLGEEGMARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEDK 247
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGFY 308
DV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+I+G +
Sbjct: 248 DVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLGEGTISGIF 307
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVLV+GDD NEP++DAVRGILDGHIV+ R++AERG++PA+NVLKS+SR R + P
Sbjct: 308 TVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRFPAINVLKSVSRTMPRSADPAYLP 367
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
KR R ++ Y + E++I LGAY+ GSSA +D+A+ + + +FL Q D+ L
Sbjct: 368 VIKRARQVMATYADMEELIRLGAYRPGSSAEVDEAVRLHEPLEEFLRQGKDEATSLSAGY 427
Query: 429 QKLSDI 434
+L I
Sbjct: 428 LQLEQI 433
>gi|77359744|ref|YP_339319.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
TAC125]
gi|76874655|emb|CAI85876.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
TAC125]
Length = 444
Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats.
Identities = 202/417 (48%), Positives = 274/417 (65%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G + RV +E++G A VG C+I T + + AE+VG N + LM + GV
Sbjct: 28 GILTRVVGLTLEAKGLRAPVGSQCKIETMNG--FVDAEIVGFNDQTLYLMPNDHISGVLP 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G VI +PVG LLGRVVD L + DG + + P + ++R+PI Q
Sbjct: 86 GARVIPQLNDTGLPVGMSLLGRVVDGLGRPLDGLGKINAEHYLKFAQKPINPLSRRPISQ 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI+S++ VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ L+GERGREV
Sbjct: 146 PMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVK 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EG K SV+V+A +D S L R++G +A IAEYFRDQG +V+LL DSVTR+
Sbjct: 206 EFIEEILGVEGRKRSVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRY 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT--SEKGSITGFYTVLVEGDDMNE 319
AMAQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +GSIT F+TVL EGDDM +
Sbjct: 266 AMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQD 325
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ +V ++ ++ +
Sbjct: 326 PIADAARAILDGHIVLSRELADSGHYPAIDIEKSISRVMPQVVSETHMQQARVLKQVYSM 385
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y +++DMI LGAYQKG+ +D AI+ PR+ FL Q + D D LQ L+ + G
Sbjct: 386 YQQNKDMITLGAYQKGTDQMLDQAINMMPRVNAFLQQGMRDVISYDDGLQGLAQLLG 442
>gi|54297670|ref|YP_124039.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Paris]
gi|53751455|emb|CAH12873.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Paris]
Length = 449
Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats.
Identities = 202/401 (50%), Positives = 268/401 (66%), Gaps = 3/401 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ R IE++G VG C + +D ++AEVVG + V LMS D+QG+
Sbjct: 27 GRISRAIGLTIEAKGFNQPVGARCLVKINDE-HSVQAEVVGFSNESVYLMSIGDIQGIAP 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +I +G I V VG+ LLGR+++ D P + YP++ + + R PI
Sbjct: 86 GMKIIPTGRIAQVSVGHQLLGRILNGSGMFIDDGPPSEMVETYPLIGQVINPLKRAPIEV 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIRAI+ LL VGRGQR+G+FAG+G+GKS LLGM+ R T ADV V+ LIGERGREV
Sbjct: 146 PLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVK 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE +LG +GLK +V+V+A +D+S L R+ GA AT+IAEYFRDQGK V+LL DS+TRF
Sbjct: 206 EFIECNLGLQGLKRAVVVAAPADESPLMRLHGAKVATSIAEYFRDQGKHVLLLIDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI L+IGE PAT+GY PSVF+ LPKL+ER+ GTS GSIT FYTVL EGDD+ +
Sbjct: 266 AQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGTSGGGSITAFYTVLTEGDDLQD 325
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGH+VL R LAE+GQYPA+++ SISR+ V + L
Sbjct: 326 PIADAARAILDGHVVLSRALAEQGQYPAIDLEASISRVMQGVVSEQHMKDMLLFKKYLSV 385
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
Y +++D+I LGAY KGS +D AI ++ D+L Q +D+
Sbjct: 386 YEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQGMDE 426
>gi|154252622|ref|YP_001413446.1| flagellar protein export ATPase FliI [Parvibaculum lavamentivorans
DS-1]
gi|154156572|gb|ABS63789.1| flagellar protein export ATPase FliI [Parvibaculum lavamentivorans
DS-1]
Length = 445
Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats.
Identities = 196/420 (46%), Positives = 281/420 (66%), Gaps = 3/420 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQLMSYTDV 76
+K GRVV + ++E GP+ ++G ++ +++ + + EVVG + + +
Sbjct: 14 VKHYGRVVSIQGLMVEVAGPLHAMGVGSRLNVSNRAGEEVICEVVGFRDNKALCLPFGAL 73
Query: 77 QGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK-PEPYSAKRYPVVASPPDAMT 135
G+ +G + S E V + LGRVV+A+ + DGK P A+ Y + PP A T
Sbjct: 74 AGIGVGCKAVLSSEEPHVYPSSAWLGRVVNAMGEPMDGKGPIAQGAQPYLLRNMPPPAHT 133
Query: 136 RKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGE 195
R+ +R +I G+RA+++ RGQR+GIFAG+G+GKS LL M+ARNT DV+VI LIGE
Sbjct: 134 RQRVRGKIDLGVRALNTFTTCCRGQRMGIFAGSGVGKSVLLSMLARNTACDVSVIGLIGE 193
Query: 196 RGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLF 255
RGREV +FIE DLGPEGL SV+V ATSD+ AL R + AY ++AEYFRD+ ++V+ +
Sbjct: 194 RGREVQEFIEDDLGPEGLARSVVVVATSDEPALMRRQAAYLTLSLAEYFRDRDQNVLCMM 253
Query: 256 DSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT-SEKGSITGFYTVLVEG 314
DSVTRFA+AQREIGL+ GEPP ++GYTP+VF+ LPKLLER+G + G+ITG +TVLV+G
Sbjct: 254 DSVTRFAVAQREIGLSTGEPPTSKGYTPTVFAELPKLLERAGPGTGSGNITGLFTVLVDG 313
Query: 315 DDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMR 374
DD NEP++DAVR ILDGHIV++R++AERG+YPA+NVLKS+SR + + +R R
Sbjct: 314 DDHNEPVADAVRSILDGHIVMERSIAERGRYPAINVLKSVSRTMPDCNEAEENELIRRAR 373
Query: 375 TLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
L+ Y + E++I LGAY+ GS +D+AI + P + FL Q D + L + L+ +
Sbjct: 374 ALMATYDDMEELIRLGAYRPGSDPQVDEAIFYQPALEAFLAQNKHDASSLAEGYSALAAV 433
>gi|39934703|ref|NP_946979.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
gi|39648553|emb|CAE27074.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
Length = 441
Score = 364 bits (935), Expect = 5e-99, Method: Composition-based stats.
Identities = 203/431 (47%), Positives = 279/431 (64%), Gaps = 13/431 (3%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPD-GLKAEVVGLNGTIVQL 70
+ + D + GRVV V ++E GP+ ++ +I+ + + + EV+G G +
Sbjct: 8 IGDIDSVNTYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGANREIPCEVIGFTGNNAIV 67
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGK------PEPYSAKRY 124
M + ++GV+ G I + V LGRVV+AL + DGK P P +
Sbjct: 68 MPFAGLEGVRRGCRAIIANSAAQVRPSPHWLGRVVNALGEPIDGKGPLVQGPSPMQFRN- 126
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
PP A +RK + + G+RA+++ L RGQR+GIFAG+G+GKS LL M+ARN +
Sbjct: 127 ----QPPPAHSRKRVGMPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVD 182
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
A V+VI LIGERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY AIAEYF
Sbjct: 183 AAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIAEYF 242
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGS 303
RD KDV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+
Sbjct: 243 RDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLGEGT 302
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
ITG +TVLV+GDD NEP++DAVRGILDGHIV+ R++AERG+YPA+NVLKS+SR + +
Sbjct: 303 ITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRYPAINVLKSVSRTMPKSAD 362
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P KR R ++ Y + E++I LGAY+ GSSA +D+A+ + + DFL Q D+
Sbjct: 363 PVYLPMIKRARQIMATYADMEELIRLGAYRPGSSAEVDEAVRLHEPLEDFLRQGKDEATS 422
Query: 424 LKDTLQKLSDI 434
L+ +L I
Sbjct: 423 LQSGYVQLEQI 433
>gi|54294644|ref|YP_127059.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Lens]
gi|53754476|emb|CAH15960.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
Lens]
Length = 449
Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats.
Identities = 201/401 (50%), Positives = 268/401 (66%), Gaps = 3/401 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ R IE++G +G C + +D ++AEVVG + V LMS D+QG+
Sbjct: 27 GRISRAIGLTIEAKGFNQPIGARCLVKINDE-HSVQAEVVGFSNESVYLMSIGDIQGIAP 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G +I +G I V VG+ LLGR+++ D P + YP++ + + R PI
Sbjct: 86 GMKIIPTGRIAQVNVGHQLLGRILNGSGMFIDDGPPGEMVETYPLIGQVINPLKRAPIEV 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIRAI+ LL VGRGQR+G+FAG+G+GKS LLGM+ R T ADV V+ LIGERGREV
Sbjct: 146 PLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVK 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE +LG EGLK +V+V+A +D+S L R+ GA AT+IAEYFRDQGK V+LL DS+TRF
Sbjct: 206 EFIECNLGLEGLKRAVVVAAPADESPLMRLHGAKVATSIAEYFRDQGKHVLLLIDSLTRF 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI L+IGE PAT+GY PSVF+ LPKL+ER+ GT+ GSIT FYTVL EGDD+ +
Sbjct: 266 AQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGTAGGGSITAFYTVLTEGDDLQD 325
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGH+VL R LAE+GQYPA+++ SISR+ V + L
Sbjct: 326 PIADAARAILDGHVVLSRALAEQGQYPAIDLEASISRVMQGVVSEQHMKDMLLFKKYLSV 385
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
Y +++D+I LGAY KGS +D AI ++ D+L Q +D+
Sbjct: 386 YEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQGMDE 426
>gi|88800457|ref|ZP_01116021.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
gi|88776787|gb|EAR07998.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
Length = 486
Score = 363 bits (933), Expect = 9e-99, Method: Composition-based stats.
Identities = 203/442 (45%), Positives = 286/442 (64%), Gaps = 5/442 (1%)
Query: 14 ETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSY 73
++DP+ GR+ R+ +E+ G AS+G+ CQ++ D+ ++AEVVG + LM
Sbjct: 20 QSDPV-CQGRLTRMVGLTLEAVGLNASIGQRCQVV--DHHQRVEAEVVGFHDDKTFLMPV 76
Query: 74 TDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDA 133
+ ++ G V+ + +G+ LLGRVV+ + DGK + + +
Sbjct: 77 QAIHNLRAGARVVPLEVANELVIGDELLGRVVNGFGEPIDGKGALLCRAQQSLNGEYINP 136
Query: 134 MTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALI 193
+ R+PIRQ + GIRAI+SLL VGRGQRLG+FAG+G+GKS LLGM+ R T+AD+ ++ LI
Sbjct: 137 LHREPIRQPLDVGIRAINSLLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTDADITIVGLI 196
Query: 194 GERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVML 253
GERGREV +FIE LG EGL SV+V++ +D + L R+R A TAIAEYFR QGK V+L
Sbjct: 197 GERGREVKEFIEEILGDEGLARSVVVASPADDAPLLRLRAAQYTTAIAEYFRSQGKTVLL 256
Query: 254 LFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVL 311
L DS+TR+A AQREI LAIGEPPAT+GY PSVF+ LP+L+ER+G +EK GSIT FYTVL
Sbjct: 257 LMDSLTRYAQAQREIALAIGEPPATKGYPPSVFARLPQLVERAGNAEKGGGSITAFYTVL 316
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
EGDD +PI+D+ R ILDGH VL+R LAE G YPA+++ +SISR+ +V + A++
Sbjct: 317 TEGDDQQDPIADSSRAILDGHFVLNRKLAEEGHYPAIDIEQSISRVMPQVVSEDHLKAAQ 376
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+ L Y+++ D+I++GAY KGS+ ID AI P I DFL Q + + + ++ L
Sbjct: 377 ATKQLWSTYSQNRDLISIGAYTKGSNQEIDQAIALQPIIRDFLRQGLKEQVPYQQSVDLL 436
Query: 432 SDITGIDIPPEEFDEAGLGVGA 453
+ G P +G V
Sbjct: 437 KAVLGSGQAPANTSASGGAVAG 458
>gi|56413614|ref|YP_150689.1| type III secretion system ATPase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|56127871|gb|AAV77377.1| putative type III secretion ATP synthase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
Length = 433
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 206/414 (49%), Positives = 260/414 (62%), Gaps = 7/414 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ V L+ + P +GELC I P AEVVG+NG+ L +T G+
Sbjct: 23 GRIQDVSATLLNAWLPGVFMGELCCI----KPGEELAEVVGINGSKALLSPFTSTIGLHC 78
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA-KRYPVVASPPDAMTRKPIR 140
G V+A VPVG LLGRV+D + DG+ P K Y A PP AM R+PI
Sbjct: 79 GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYD--AMPPPAMVRQPIT 136
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
Q ++TGIRAIDS+ G GQR+GIF+ G+GKSTLL M+ +AD NV+ LIGERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FI+ L E K VIV ATSD+ AL R+R + AT IAE+FRD GK V+LL DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEP 320
+A A REI LA GE + Y P VFS+LP+LLER+G EKGSIT FYTVLVEGDDMNEP
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEP 316
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
++D VR +LDGHIVL R LAERG YPA++VL ++SR+ V+ + + +R L Y
Sbjct: 317 LADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALY 376
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E +I +G YQ+G D AID YP I FL Q D+ + ++KL I
Sbjct: 377 QEVELLIRIGEYQRGVDTDTDKAIDAYPDICTFLRQSKDEVCGPELLIEKLHQI 430
>gi|90425705|ref|YP_534075.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
gi|90107719|gb|ABD89756.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
Length = 441
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 198/427 (46%), Positives = 282/427 (66%), Gaps = 5/427 (1%)
Query: 12 VSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG-LKAEVVGLNGTIVQL 70
+ + D + GRVV V ++E GP+ ++ +I+ + + EV+G NG +
Sbjct: 8 IGDIDGVMMYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGGSRFIPCEVIGFNGNNAVV 67
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVV--A 128
M + ++GV+ G + + V LGRV++A+ + DGK P + P+
Sbjct: 68 MPFAGLEGVRRGCRAVIANAAAQVRPSPSWLGRVLNAMGEPIDGK-GPLTQGTSPMTFRN 126
Query: 129 SPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVN 188
+PP A +RK + + G+RA+++ L RGQRLGIFAG+G+GKS LL M+ARN +ADV+
Sbjct: 127 APPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDADVS 186
Query: 189 VIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQG 248
VI L+GERGREV +F++ DLG EG+ SV+V ATSD+ AL R + AY AI+EYFRD G
Sbjct: 187 VIGLVGERGREVQEFLQDDLGDEGMARSVVVVATSDEPALMRRQAAYLTLAISEYFRDDG 246
Query: 249 KDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGF 307
KDV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+ITG
Sbjct: 247 KDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLNEGTITGI 306
Query: 308 YTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTK 367
+TVLV+GDD NEP++DAVRGILDGHIV++R +AERG+YPA+N+LKS+SR + + P
Sbjct: 307 FTVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMPKSADPAYL 366
Query: 368 DASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDT 427
+R R ++ Y + E++I LGAY+ GSS +D+AI + + DFL Q ++ L+
Sbjct: 367 PIIRRARQIMGTYADMEELIRLGAYRAGSSPEVDEAIRLHQPLEDFLRQGKEEATALQAG 426
Query: 428 LQKLSDI 434
+L I
Sbjct: 427 YAQLEQI 433
>gi|34498589|ref|NP_902804.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
12472]
gi|34104443|gb|AAQ60801.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
12472]
Length = 466
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 205/436 (47%), Positives = 273/436 (62%), Gaps = 24/436 (5%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+VRV ++E+ G VG C+++ D ++AEVVG +G V LM T+V G+
Sbjct: 30 GRLVRVTGMVMEAVGIKLPVGSACRVMLAD-AHSVEAEVVGFSGDKVFLMPLTNVHGLLP 88
Query: 82 GDLVI---------------------ASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
G V+ VPVG LLGRV+D+L + DG +
Sbjct: 89 GTPVLPLPSFNPPRYGSEPGAAQAASNGAAGRQVPVGASLLGRVLDSLGRPLDGLGPIHP 148
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+P+ + P + + R P+ + G+RAI+ LL VGRGQRLG+FAG+G+GKS LLGM+A
Sbjct: 149 DAWFPLYSQPMNPLHRTPVHDVLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMA 208
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R T ADV V+ LIGERGREV DFIE+ LG EG SV+V+A +D L R+ GA ATA+
Sbjct: 209 RFTKADVVVVGLIGERGREVKDFIENILGEEGRARSVVVAAPADMPPLMRLHGAAYATAL 268
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFR QG DV+LL DSVTRFAMAQREI LAIGEPP TRGY PSVF+ LP+L+ER+G E
Sbjct: 269 AEYFRSQGLDVLLLMDSVTRFAMAQREIALAIGEPPVTRGYPPSVFARLPQLIERAGNGE 328
Query: 301 K--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLS 358
+ GSITGFYTVL EGDD +PI+D+ R ILDGH VL R+LAE G YPA+++ +SISR+
Sbjct: 329 EGGGSITGFYTVLSEGDDQQDPIADSARAILDGHFVLSRDLAEAGHYPAIDIEQSISRVM 388
Query: 359 NRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV 418
V D ++ + L Y + D+I++GAY GS +DDA+ + FLTQ +
Sbjct: 389 VDVVPQQQMDLARHFKQLYSRYQRNRDLISVGAYVSGSDPVLDDAMRRQLPMVSFLTQPM 448
Query: 419 DDPAKLKDTLQKLSDI 434
+ ++L+ +
Sbjct: 449 HESHDYASCCEQLAGV 464
>gi|77959500|ref|ZP_00823519.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia bercovieri ATCC 43970]
Length = 460
Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats.
Identities = 204/443 (46%), Positives = 282/443 (63%), Gaps = 10/443 (2%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITD--DNPDGLKAE 59
+D D+ + P + G++ R ++E+ G +G LC + + + D +++E
Sbjct: 9 LDAIDRKEKQIISLPPFQQYGKLTRATGLVMEAVGLKLPIGTLCIVERNRGNGTDKIESE 68
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIA--SGEILS----VPVGNILLGRVVDALCKSAD 113
VVG NG I+ LM +V G+ G V A SG ++ +P+G LLGRV+DA + D
Sbjct: 69 VVGFNGEILYLMPLENVDGILPGARVYAFESGAGITKGKQLPLGPELLGRVLDASARPLD 128
Query: 114 GKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKS 173
G P P AK + P + + R PI+ + G+RAI+ LL VGRGQR+G+FAG+G+GKS
Sbjct: 129 GLPPPGCAKHGSLFTQPVNPLLRDPIKHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKS 188
Query: 174 TLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGM+AR T ADV V+ LIGERGREV DFIE+ LG EG SV+++A +D S + R++G
Sbjct: 189 VLLGMMARYTKADVIVVGLIGERGREVKDFIENILGEEGRTRSVVIAAPADVSPILRMQG 248
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
A AT IAE FRD+G DV+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+
Sbjct: 249 AVYATRIAEDFRDRGMDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV 308
Query: 294 ERS--GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVL 351
ER+ G E GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++
Sbjct: 309 ERAGNGVKEGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIE 368
Query: 352 KSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIY 411
SISR + + + LL Y + D++++GAY GS +D AI YP +
Sbjct: 369 ASISRAMTELIDATHYKKVQSFKQLLSSYQRNRDLVSVGAYAAGSDPLLDKAIRLYPDME 428
Query: 412 DFLTQEVDDPAKLKDTLQKLSDI 434
FL Q + + + ++ +LSD+
Sbjct: 429 RFLQQVIYESSGYEEACDRLSDM 451
>gi|77634796|ref|ZP_00796890.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia pestis Angola]
gi|89104565|ref|ZP_01177105.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia pestis biovar Orientalis str. IP275]
gi|108810006|ref|YP_653922.1| putative type III secretion system ATP synthase [Yersinia pestis
Antiqua]
gi|108813561|ref|YP_649328.1| type III secretion system ATP synthase [Yersinia pestis Nepal516]
gi|145600951|ref|YP_001165027.1| type III secretion system ATP synthase [Yersinia pestis Pestoides
F]
gi|108777209|gb|ABG19728.1| type III secretion system ATP synthase [Yersinia pestis Nepal516]
gi|108781919|gb|ABG15977.1| putative type III secretion system ATP synthase [Yersinia pestis
Antiqua]
gi|145212647|gb|ABP42054.1| type III secretion system ATP synthase [Yersinia pestis Pestoides
F]
Length = 448
Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats.
Identities = 196/438 (44%), Positives = 276/438 (63%), Gaps = 10/438 (2%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + T + + +++ G +V + L+ + P + GELC+I P G+ AEVV +
Sbjct: 16 LQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRI----EPQGMLAEVVSI 71
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ L + G++ G V G + V VG L GR++D L DG P P + +
Sbjct: 72 EQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP-PLTGQW 130
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
+ PP +TR+P+ Q + TGIRAID +L+ G GQR+GIFA G+GKSTLL M+ ++
Sbjct: 131 RELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADS 190
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADV V+ALIGERGREV +F+E L PE +V+V ATSD+ AL R++G TAT +AEY
Sbjct: 191 AADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEY 250
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FR++G V+LL DS+TR+A A REIGLA GEPPA + PSVF++LP+LLER+G S++GS
Sbjct: 251 FRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGS 310
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVLVEGDDMNEP++D VR +LDGHIVL R LA G YPA+++ S+SR+ ++
Sbjct: 311 ITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVS 370
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD---- 419
++++R +L Y E E ++ +G YQ G D+A+ YP I FL Q+
Sbjct: 371 AGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRD 430
Query: 420 -DPAKLKDTLQKLSDITG 436
D A L TL+ L+ + G
Sbjct: 431 PDTAHLDTTLEHLAQVVG 448
>gi|119469988|ref|ZP_01612793.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
gi|119446698|gb|EAW27971.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
Length = 444
Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats.
Identities = 201/417 (48%), Positives = 274/417 (65%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G + RV +E++G A VG C+I T + + AE+VG N + LM + GV
Sbjct: 28 GILTRVVGLTLEAKGLRAPVGSQCKIETMNG--FVDAEIVGFNDQTLYLMPNDHISGVLP 85
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G VI L +PVG LLGRVVD L + DG + + + + + R+PI Q
Sbjct: 86 GARVIPQVNNLGLPVGMSLLGRVVDGLGRPLDGLGKINAEHYLKFAQNTINPLARRPISQ 145
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI+S++ VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ L+GERGREV
Sbjct: 146 PMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVK 205
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EG K SV+V+A +D S L R++G +A IAEYFRDQG +V+LL DSVTR+
Sbjct: 206 EFIEEILGEEGRKRSVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRY 265
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT--SEKGSITGFYTVLVEGDDMNE 319
AMAQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +G+IT F+TVL EGDDM +
Sbjct: 266 AMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGEGQGAITAFFTVLSEGDDMQD 325
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ +V ++ ++ +
Sbjct: 326 PIADAARAILDGHIVLSRELADSGHYPAIDIEKSISRVMPQVVSEPHMQQARVLKQVYSM 385
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y +++DMI LGAYQKG+ +D AI+ PR+ FL Q + D D LQ L+ + G
Sbjct: 386 YQQNKDMITLGAYQKGTDPMLDQAINMMPRVNGFLQQGMRDVISYDDGLQGLAQLLG 442
>gi|62180006|ref|YP_216423.1| type III secretion system ATPase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62127639|gb|AAX65342.1| Secretion system apparatus SsaN [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 433
Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats.
Identities = 206/414 (49%), Positives = 260/414 (62%), Gaps = 7/414 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ V L+ + P +GELC I P AEVVG+NG+ L +T G+
Sbjct: 23 GRIQDVSATLLNAWLPGVFMGELCCI----KPGEELAEVVGINGSKALLSPFTSTAGLHC 78
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSA-KRYPVVASPPDAMTRKPIR 140
G V+A VPVG LLGRV+D + DG+ P K Y A PP AM R+PI
Sbjct: 79 GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYD--AMPPPAMVRQPIT 136
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
Q ++TGIRAIDS+ G GQR+GIF+ G+GKSTLL M+ +AD NV+ LIGERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FI+ L E K VIV ATSD+ AL R+R + AT IAE+FRD GK V+LL DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEP 320
+A A REI LA GE + Y P VFS+LP+LLER+G EKGSIT FYTVLVEGDDMNEP
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEP 316
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
++D VR +LDGHIVL R LAERG YPA++VL ++SR+ V+ + + +R L Y
Sbjct: 317 LADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALY 376
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E +I +G YQ+G D AID YP I FL Q D+ + ++KL I
Sbjct: 377 QEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430
>gi|16764765|ref|NP_460380.1| type III secretion system ATPase [Salmonella typhimurium LT2]
gi|3024659|sp|P74857|SSAN_SALTY Probable secretion system apparatus ATP synthase ssaN
gi|1669750|emb|CAA70537.1| secretion system apparatus [Salmonella typhimurium]
gi|16419936|gb|AAL20339.1| secretion system apparatus protein [Salmonella typhimurium LT2]
Length = 433
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 206/414 (49%), Positives = 260/414 (62%), Gaps = 7/414 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ V L+ + P +GELC I P AEVVG+NG+ L +T G+
Sbjct: 23 GRIQDVSATLLNAWLPGVFMGELCCI----KPGEELAEVVGINGSKALLSPFTSTIGLHC 78
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEP-YSAKRYPVVASPPDAMTRKPIR 140
G V+A VPVG LLGRV+D + DG+ P K Y A PP AM R+PI
Sbjct: 79 GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYD--AMPPPAMVRQPIT 136
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
Q ++TGIRAIDS+ G GQR+GIF+ G+GKSTLL M+ +AD NV+ LIGERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FI+ L E K VIV ATSD+ AL R+R + AT IAE+FRD GK V+LL DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEP 320
+A A REI LA GE + Y P VFS+LP+LLER+G EKGSIT FYTVLVEGDDMNEP
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEP 316
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
++D VR +LDGHIVL R LAERG YPA++VL ++SR+ V+ + + +R L Y
Sbjct: 317 LADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALY 376
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E +I +G YQ+G D AID YP I FL Q D+ + ++KL I
Sbjct: 377 QEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430
>gi|15596301|ref|NP_249795.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAO1]
gi|84328576|ref|ZP_00976580.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Pseudomonas aeruginosa 2192]
gi|107100555|ref|ZP_01364473.1| hypothetical protein PaerPA_01001580 [Pseudomonas aeruginosa PACS2]
gi|116049033|ref|YP_792165.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
UCBPP-PA14]
gi|81541593|sp|Q9I4N1|FLII_PSEAE Flagellum-specific ATP synthase
gi|9947021|gb|AAG04493.1|AE004540_13 flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa PAO1]
gi|115584254|gb|ABJ10269.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126192851|gb|EAZ56914.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192]
Length = 451
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 202/434 (46%), Positives = 282/434 (64%), Gaps = 4/434 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDD--NPDGLKAEVVG 62
+ YT AVS GR++R+ +E+EG A+VG C +I + +P ++AEV+G
Sbjct: 12 LEGYTEAVSLPAQPVVEGRLLRMVGLTLEAEGLQAAVGSRCNVINESGYHPVQVEAEVMG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+G+ V LM + G+ G V+ + +P+G +LGRV+D ++ DGK +
Sbjct: 72 FSGSKVYLMPVGSLAGIAPGARVVPLPDTGRLPMGMSMLGRVLDGAGRALDGKGGMRAED 131
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
P+ + + R PI + + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R
Sbjct: 132 WVPMDGPTINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRF 191
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T AD+ V+ LIGERGREV +FI+ LG EGLK SV+V++ +D + L R+R A T IAE
Sbjct: 192 TRADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAE 251
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRD+GK+V+LL DS+TR+A AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +E
Sbjct: 252 YFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAG 311
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT FYTVL EGDD +PI+DA RG+LDGH VL R LAE G YPA+++ SISR+ +
Sbjct: 312 GGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQ 371
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V ++R + L Y +S D+I++GAY G D AI +P + FL Q +D+
Sbjct: 372 VVEAEHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDPETDLAIARFPVMRQFLRQGLDE 431
Query: 421 PAKLKDTLQKLSDI 434
L ++ +L+ +
Sbjct: 432 SESLAESRARLASL 445
>gi|45440276|ref|NP_991815.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
str. 91001]
gi|45435132|gb|AAS60692.1| putative type III secretion system ATP synthase [Yersinia pestis
biovar Microtus str. 91001]
Length = 446
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 196/438 (44%), Positives = 276/438 (63%), Gaps = 10/438 (2%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + T + + +++ G +V + L+ + P + GELC+I P G+ AEVV +
Sbjct: 14 LQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRI----EPQGMLAEVVSI 69
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ L + G++ G V G + V VG L GR++D L DG P P + +
Sbjct: 70 EQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP-PLTGQW 128
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
+ PP +TR+P+ Q + TGIRAID +L+ G GQR+GIFA G+GKSTLL M+ ++
Sbjct: 129 RELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADS 188
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADV V+ALIGERGREV +F+E L PE +V+V ATSD+ AL R++G TAT +AEY
Sbjct: 189 AADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEY 248
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FR++G V+LL DS+TR+A A REIGLA GEPPA + PSVF++LP+LLER+G S++GS
Sbjct: 249 FRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGS 308
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVLVEGDDMNEP++D VR +LDGHIVL R LA G YPA+++ S+SR+ ++
Sbjct: 309 ITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVS 368
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD---- 419
++++R +L Y E E ++ +G YQ G D+A+ YP I FL Q+
Sbjct: 369 AGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRD 428
Query: 420 -DPAKLKDTLQKLSDITG 436
D A L TL+ L+ + G
Sbjct: 429 PDTAHLDTTLEHLAQVVG 446
>gi|115422793|emb|CAJ49321.1| flagellum-specific ATP synthase [Bordetella avium 197N]
Length = 479
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 204/448 (45%), Positives = 278/448 (62%), Gaps = 29/448 (6%)
Query: 13 SETDPIKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQLM 71
+ T+P TGR+ R ++ + G VG C+I I + AEVVG +G + LM
Sbjct: 21 ASTEPALSTGRITRATGLVLHATGLRLPVGAACRIEIARGHDLWADAEVVGFDGQTLYLM 80
Query: 72 SYTDVQGVKIGDLVIASGEILS----------------------VPVGNILLGRVVDALC 109
D+ G+ G V+ + ++ +PVGN LLGRVVD
Sbjct: 81 PQADISGLPPGARVMPAEPVVQRSVPLPRKAELNGNAKPQLGRHLPVGNALLGRVVDGAG 140
Query: 110 KSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTG 169
+ D A+ P+ A P + ++R PI + G+RAI+ LL VGRGQR+G+FAG+G
Sbjct: 141 RPLDDLGPLTGAELAPLAAQPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLFAGSG 200
Query: 170 IGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALA 229
+GKS LLGM+AR T AD+ V+ LIGERGREV +FIEH+LGPEGL SV+V+A +D S L
Sbjct: 201 VGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADVSPLL 260
Query: 230 RIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSL 289
R++GA AT +AE+FRDQG DV+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ L
Sbjct: 261 RLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 320
Query: 290 PKLLERSG------TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERG 343
P L+ER+G GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G
Sbjct: 321 PMLVERTGMGAPGPNGRAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRTLAEAG 380
Query: 344 QYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDA 403
YPA+++ SISR + P + +R + +L Y + D+I++GAY G+ +D+A
Sbjct: 381 HYPAIDIEASISRAMTSLITPQQFNLVRRFKQMLSRYQRNRDLISVGAYVPGADPQLDEA 440
Query: 404 IDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
I YPR+ FL QE+ + D ++ L
Sbjct: 441 IARYPRLEAFLQQEIGENISYGDAVEIL 468
>gi|16120605|ref|NP_403918.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
gi|22124440|ref|NP_667863.1| flagellum-specific ATP synthase [Yersinia pestis KIM]
gi|51594678|ref|YP_068869.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
32953]
gi|150260685|ref|ZP_01917413.1| putative type III secretion system ATP synthase [Yersinia pestis
CA88-4125]
gi|21957227|gb|AAM84114.1|AE013654_3 flagellum-specific ATP synthase [Yersinia pestis KIM]
gi|51587960|emb|CAH19563.1| putative type III secretion system ATPase, EscN/SsaN/YscN [Yersinia
pseudotuberculosis IP 32953]
gi|115346084|emb|CAL18952.1| putative type III secretion system ATP synthase [Yersinia pestis
CO92]
gi|149290093|gb|EDM40170.1| putative type III secretion system ATP synthase [Yersinia pestis
CA88-4125]
Length = 445
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 196/438 (44%), Positives = 276/438 (63%), Gaps = 10/438 (2%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + T + + +++ G +V + L+ + P + GELC+I P G+ AEVV +
Sbjct: 13 LQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRI----EPQGMLAEVVSI 68
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ L + G++ G V G + V VG L GR++D L DG P P + +
Sbjct: 69 EQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP-PLTGQW 127
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
+ PP +TR+P+ Q + TGIRAID +L+ G GQR+GIFA G+GKSTLL M+ ++
Sbjct: 128 RELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADS 187
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADV V+ALIGERGREV +F+E L PE +V+V ATSD+ AL R++G TAT +AEY
Sbjct: 188 AADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEY 247
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FR++G V+LL DS+TR+A A REIGLA GEPPA + PSVF++LP+LLER+G S++GS
Sbjct: 248 FRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGS 307
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVLVEGDDMNEP++D VR +LDGHIVL R LA G YPA+++ S+SR+ ++
Sbjct: 308 ITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVS 367
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD---- 419
++++R +L Y E E ++ +G YQ G D+A+ YP I FL Q+
Sbjct: 368 AGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRD 427
Query: 420 -DPAKLKDTLQKLSDITG 436
D A L TL+ L+ + G
Sbjct: 428 PDTAHLDTTLEHLAQVVG 445
>gi|37525868|ref|NP_929212.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785297|emb|CAE14238.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 454
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 201/426 (47%), Positives = 276/426 (64%), Gaps = 10/426 (2%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDD--NPDGLKAEVVG 62
D + +++T P++ GR+ R ++E+ G +G C I + N + +++EVVG
Sbjct: 12 LDTFEQKLAKTSPVRRYGRLTRATGLVMEATGLHLPLGATCLIERQNGSNIEEVESEVVG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIAS------GEILSVPVGNILLGRVVDALCKSADGKP 116
NG + LM D++G+ G V A G +P+G LLGRV+D + DG P
Sbjct: 72 FNGEKLLLMPLEDLEGIVPGARVYARPYSEDCGGGRQLPLGPELLGRVLDGAGRPLDGFP 131
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
P ++ R P+ P + + R PI + G+RAI++LL VGRGQR+G+FAG+G+GKS LL
Sbjct: 132 SPDTSYRAPLTTPPINPLQRTPISDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLL 191
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+AR T ADV V+ LIGERGREV DFIE+ LG GL SV+V+A +D S L R++GA
Sbjct: 192 GMMARYTQADVIVVGLIGERGREVKDFIENILGAAGLARSVVVAAPADISPLLRMQGASY 251
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
AT IAE FRD+GK V+L+ DS+TR++MAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 252 ATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 311
Query: 297 GTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G GSIT FYTVL EGDD +PI+DA R ILDGHIVL R+LAE G YPA+++ SI
Sbjct: 312 GNGVNGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDIEASI 371
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR + ++ + L Y + D+IN+GAY GS +D AI+ YP + FL
Sbjct: 372 SRAMTALIDKQHYRRVQQFKQRLASYQRNRDLINVGAYAAGSDPLLDKAIELYPYMAQFL 431
Query: 415 TQEVDD 420
Q++++
Sbjct: 432 QQDIEE 437
>gi|66046683|ref|YP_236524.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
B728a]
gi|63257390|gb|AAY38486.1| ATPase FliI/YscN [Pseudomonas syringae pv. syringae B728a]
Length = 452
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 201/431 (46%), Positives = 278/431 (64%), Gaps = 4/431 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNG 65
Y ++S GR++R+ +E+EG A++G C +I DD+ P ++AEV+G +G
Sbjct: 15 YAESISLPAQPVVEGRLLRMVGLTLEAEGLRAAMGSRCVVINDDSHHPVEVEAEVMGFSG 74
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
V LM V G+ G V+ + +P+G +LGRV+D + DG+ + P
Sbjct: 75 GKVFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVP 134
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
+ + + R PI Q + GIR I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A
Sbjct: 135 MDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEA 194
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
D+ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFR
Sbjct: 195 DIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFR 254
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GS 303
D+GK+V+LL DS+TRFA AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +EK GS
Sbjct: 255 DKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGS 314
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVL EGDD +PI+D+ RG+LDGHIVL R LAE G YPA+++ SISR+ V
Sbjct: 315 ITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVS 374
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P ++ + L Y ++ D+I++GAY G D AI +P + + Q + +
Sbjct: 375 PEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQALRENES 434
Query: 424 LKDTLQKLSDI 434
++ + + L+ I
Sbjct: 435 MQGSSEALASI 445
>gi|90406816|ref|ZP_01215008.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
gi|90312053|gb|EAS40146.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
Length = 443
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 202/431 (46%), Positives = 285/431 (66%), Gaps = 5/431 (1%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
+Y S T P +G+++RV +E+ G +A+VG LC++ + D + AEVVG +G
Sbjct: 10 QYKTGESVTKP-TVSGKLIRVVGLTLEAIGCIAAVGSLCKVESQDG--FIDAEVVGFSGE 66
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
+ LM + GV G VI +PVG LLGRV+D + K DGK + +A+
Sbjct: 67 RLFLMPSERLTGVLPGAKVIPQTHQQGIPVGMELLGRVLDGIGKPIDGKGDIVTAQTSNY 126
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
+ + ++RK I + + GI+AI++LL VG+GQR+G+FAG+G+GKS LLGM+ R TNAD
Sbjct: 127 THASINPLSRKAITEPLDVGIKAINALLTVGQGQRMGLFAGSGVGKSVLLGMMTRGTNAD 186
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
V V+ LIGERGREV +FIE LG EG K +V+++A +D S L R++G T+ IAEYFRD
Sbjct: 187 VVVVGLIGERGREVKEFIEDILGEEGRKRAVVIAAPADASPLMRLKGCETSLTIAEYFRD 246
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSI 304
QG +V+LL DS+TRFA AQREI LAIGEPPAT+GY PSVF+ LP L+ER+ G +GSI
Sbjct: 247 QGLNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGNENQGSI 306
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
+ F+TVL EGDD+ +PI+DA R ILDGHIVL R LA+ G +PA++V KSISR+ V+
Sbjct: 307 SAFFTVLTEGDDLQDPIADASRAILDGHIVLSRELADSGHFPAIDVGKSISRVMPMVTSE 366
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ ++ ++ Y E++++I +GAY KGS ID AI P++ FL Q + +
Sbjct: 367 EHQTLARVLKQAYNLYQENKELITIGAYAKGSDPRIDKAIIIRPKLDHFLQQGMKESISY 426
Query: 425 KDTLQKLSDIT 435
D L +L+ +T
Sbjct: 427 NDCLTQLATLT 437
>gi|146307844|ref|YP_001188309.1| flagellar protein export ATPase FliI [Pseudomonas mendocina ymp]
gi|145576045|gb|ABP85577.1| flagellar protein export ATPase FliI [Pseudomonas mendocina ymp]
Length = 448
Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 200/436 (45%), Positives = 281/436 (64%), Gaps = 4/436 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVG 62
+ YT A+S GR++R+ +E+EG A++G C +I D+ P ++AEV+G
Sbjct: 12 LEGYTEAISLPSQPILEGRLLRMVGLTLEAEGLRAAIGSRCLVINGDSYHPVQVEAEVMG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+G + LM + G+ G V+ + +P+G +LGRV+D ++ DGK +
Sbjct: 72 FSGGKIYLMPVGSLAGIAPGARVVPLPDAGRLPMGMSMLGRVLDGAGRALDGKGGMKAED 131
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
PV + + R PI Q + GIR I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R
Sbjct: 132 WVPVDGPAINPLNRDPISQPLDVGIRTINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRF 191
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T A++ V+ LIGERGREV +FI+ LG EGLK SV+V++ +D + L R+R A T IAE
Sbjct: 192 TEAEIIVVGLIGERGREVKEFIDEILGAEGLKRSVVVASPADDAPLMRLRAAQYCTRIAE 251
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRD+GK+V+LL DS+TR+A AQREI LAIGEPPAT+GY PSVF+ LP+L+ER+G E
Sbjct: 252 YFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPRLVERAGNGEAG 311
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT FYTVL EGDD +PI+DA RG+LDGH VL R LAE G YPA+++ SISR+ +
Sbjct: 312 GGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIESSISRVMPQ 371
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V P ++R + L Y +S D+I++GAY G A D AI P++ +L Q + +
Sbjct: 372 VVPPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIARQPQMAQYLRQGLGE 431
Query: 421 PAKLKDTLQKLSDITG 436
+ + ++L+ + G
Sbjct: 432 SVDMAQSREQLAAVLG 447
>gi|33592499|ref|NP_880143.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
I]
gi|33572145|emb|CAE41689.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
I]
Length = 477
Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats.
Identities = 201/448 (44%), Positives = 278/448 (62%), Gaps = 29/448 (6%)
Query: 13 SETDPIKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQLM 71
+ T+P +GR+ R ++ + G VG C+I + + AEVVG +G + LM
Sbjct: 19 ASTEPWLVSGRITRAAGLVLHTTGLRLPVGAACRIELARGHDHWADAEVVGFDGHTLYLM 78
Query: 72 SYTDVQGVKIGDLVIASGEILS----------------------VPVGNILLGRVVDALC 109
+D+ G+ G V+ + + +PVGN +LGRVVD
Sbjct: 79 PQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVDGAG 138
Query: 110 KSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTG 169
+ DG A++ P+ A P + ++R PI + G+RAI+ LL VGRGQR+G+FAG+G
Sbjct: 139 RPLDGLGPLAGAEQAPLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLFAGSG 198
Query: 170 IGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALA 229
+GKS LLGM+AR T AD+ V+ LIGERGREV +FIEH+LGPEGL SV+V+A +D S L
Sbjct: 199 VGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADVSPLL 258
Query: 230 RIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSL 289
R++GA AT +AE+FRDQG DV+L+ DS+TRFAMAQREI LAIGEPPAT+GY PSVF+ L
Sbjct: 259 RLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSVFAKL 318
Query: 290 PKLLERSG------TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERG 343
P L+ER+G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R+LAE G
Sbjct: 319 PALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHLAEAG 378
Query: 344 QYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDA 403
YPA+++ SISR + +R + +L Y + D+I++GAY G+ +DDA
Sbjct: 379 HYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQLDDA 438
Query: 404 IDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
I YPR+ +L Q + D + +L
Sbjct: 439 IARYPRLEAYLQQNIGDSVDYGTAIDQL 466
>gi|119715003|ref|YP_921968.1| ATPase, FliI/YscN family [Nocardioides sp. JS614]
gi|119535664|gb|ABL80281.1| ATPase, FliI/YscN family [Nocardioides sp. JS614]
Length = 435
Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats.
Identities = 200/413 (48%), Positives = 282/413 (68%), Gaps = 2/413 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GRVV + + G A++G+L ++ P + EVV ++ + D G+++
Sbjct: 22 GRVVGLLGLRVTVSGVSAALGDLLEVQGLTGP--VPVEVVASGDGMLTCLPLGDTTGLRV 79
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
GD V+ GE L +PVG L GRV+D L + D P V PP A++R I Q
Sbjct: 80 GDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALDDLPTVVVDNLPPAALSRPRIDQ 139
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
++ G+RA+D+L++ GRGQRLGI AG+G+GKS+LL MIAR T+A+++VIALIGERGREV
Sbjct: 140 QLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSLLSMIARGTDAEISVIALIGERGREVR 199
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F+E+DLGP GL+ S++V ATSD+ + R+R A+ AT IAE+FRD G+ V+L+ DS+TR
Sbjct: 200 EFLENDLGPAGLRRSIVVVATSDEPPVVRLRAAFVATRIAEWFRDSGRHVVLMMDSLTRV 259
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A+AQREIGL+ GEPPATRG+ PSVF+ LP+LLER+GTS +GSITG YTVLVEGDD+ +PI
Sbjct: 260 ALAQREIGLSAGEPPATRGFPPSVFALLPRLLERAGTSPEGSITGLYTVLVEGDDLQDPI 319
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
D+ R ILDGH+VL R+LA G +P+++VL+SISR+++ + P+ + R+R LL Y
Sbjct: 320 GDSARSILDGHVVLSRDLATSGHFPSIDVLESISRVASAIIEPSGRADGIRLRRLLAAYR 379
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
+++ +GAY GS A DDA+ PRI DFL Q++ D DT L ++
Sbjct: 380 SVRELVEIGAYVAGSDADADDALALMPRINDFLRQDMSDVTPTADTWSALHEL 432
>gi|153948731|ref|YP_001402772.1| type III secretion apparatus H+-transporting two-sector ATPase
[Yersinia pseudotuberculosis IP 31758]
gi|152960226|gb|ABS47687.1| type III secretion apparatus H+-transporting two-sector ATPase
[Yersinia pseudotuberculosis IP 31758]
Length = 445
Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats.
Identities = 195/438 (44%), Positives = 276/438 (63%), Gaps = 10/438 (2%)
Query: 4 LFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGL 63
L + T + + +++ G +V + L+ + P + GELC+I P G+ AEVV +
Sbjct: 13 LQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRI----EPQGMLAEVVSI 68
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR 123
+ L + G++ G V G + V VG L GR++D L DG P P + +
Sbjct: 69 EQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP-PLTGQW 127
Query: 124 YPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNT 183
+ PP +TR+P+ Q + TG+RAID +L+ G GQR+GIFA G+GKSTLL M+ ++
Sbjct: 128 RELDCPPPSPLTRQPVEQMLTTGVRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADS 187
Query: 184 NADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEY 243
ADV V+ALIGERGREV +F+E L PE +V+V ATSD+ AL R++G TAT +AEY
Sbjct: 188 AADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEY 247
Query: 244 FRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGS 303
FR++G V+LL DS+TR+A A REIGLA GEPPA + PSVF++LP+LLER+G S++GS
Sbjct: 248 FRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGS 307
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVLVEGDDMNEP++D VR +LDGHIVL R LA G YPA+++ S+SR+ ++
Sbjct: 308 ITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVS 367
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVD---- 419
++++R +L Y E E ++ +G YQ G D+A+ YP I FL Q+
Sbjct: 368 AGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRD 427
Query: 420 -DPAKLKDTLQKLSDITG 436
D A L TL+ L+ + G
Sbjct: 428 PDTAHLDTTLEHLAQVVG 445
>gi|88704284|ref|ZP_01101998.1| flagellum-specific ATP synthase FliI [gamma proteobacterium KT 71]
gi|88701335|gb|EAQ98440.1| flagellum-specific ATP synthase FliI [Congregibacter litoralis
KT71]
Length = 456
Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats.
Identities = 192/414 (46%), Positives = 277/414 (66%), Gaps = 7/414 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR++R+ +E+EG ++GE C++++ + E+VG + LM DV G+++
Sbjct: 35 GRLMRMVGMKLEAEGCDGAIGERCRVVSGSTV--VDTEIVGFAEGRLVLMPEGDVSGLQL 92
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V GE +V V L GRV+D + DG P P+ + + A + + R+PIR+
Sbjct: 93 GARVQPLGERATVAVDEQLFGRVIDGAGRYLDGGPAPHCSHSVALRAKALNPLDRRPIRE 152
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI++ L +G+GQRLG+FAG+G+GKSTLLGM+ R+T ADV V+ L+GERGREV
Sbjct: 153 PLDVGVRAINAFLTMGKGQRLGLFAGSGVGKSTLLGMMTRHTEADVIVVGLVGERGREVR 212
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LGP+GL +++V+ +D L R+ GA+ ATAIAEYFRDQG+DV+LL DS+TRF
Sbjct: 213 EFIEDILGPQGLARAIVVATPADYPPLMRVHGAWRATAIAEYFRDQGRDVLLLMDSLTRF 272
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA+GEPP ++GY PSVFS LP L+ER+G +GSIT YTVLVEGDD N+PI
Sbjct: 273 AQAQREIGLAVGEPPVSKGYPPSVFSLLPNLVERAGNGPEGSITAVYTVLVEGDDHNDPI 332
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
+DA R ILDGHIVL R +A+ G +PA+++ S+SR ++ +D ++ ++ L Y
Sbjct: 333 ADAARAILDGHIVLSRQVADSGLFPAIDLEASVSRAMPGIADEGQQDLARALKELYSVYR 392
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK-DTLQKLSDI 434
++ D+I++GAY+ GS ID A+ R ++ L Q + P K D Q L D+
Sbjct: 393 QNRDLISIGAYEHGSDPKIDQAL----RAHEPLRQIIRQPQHQKVDMAQSLGDL 442
>gi|28869165|ref|NP_791784.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852405|gb|AAO55479.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 452
Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats.
Identities = 201/431 (46%), Positives = 277/431 (64%), Gaps = 4/431 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNG 65
Y ++S GR++R+ +E+EG A++G C +I DD+ P ++AEV+G +G
Sbjct: 15 YAESISLPAQPVVEGRLLRMVGLTLEAEGMRAAMGSRCMVINDDSHHPVEVEAEVMGFSG 74
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
V LM V G+ G V+ + +P+G +LGRV+D + DG+ + P
Sbjct: 75 GKVFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVP 134
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
+ + + R PI Q + GIR I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A
Sbjct: 135 MDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEA 194
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
D+ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFR
Sbjct: 195 DIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFR 254
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GS 303
D+GK+V+LL DS+TRFA AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +EK GS
Sbjct: 255 DKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGS 314
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVL EGDD +PI+D+ RG+LDGHIVL R LAE G YPA+++ SISR+ V
Sbjct: 315 ITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVS 374
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P ++ + L Y ++ D+I++GAY G D AI +P + + Q + +
Sbjct: 375 PEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQALRENES 434
Query: 424 LKDTLQKLSDI 434
++ + L+ I
Sbjct: 435 MQGSGDALASI 445
>gi|16760496|ref|NP_456113.1| type III secretion system ATPase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29141744|ref|NP_805086.1| type III secretion system ATPase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
gi|25290469|pir||AE0697 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502792|emb|CAD01950.1| putative type III secretion ATP synthase [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29137372|gb|AAO68935.1| putative type III secretion ATP synthase [Salmonella enterica
subsp. enterica serovar Typhi Ty2]
Length = 433
Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats.
Identities = 206/414 (49%), Positives = 259/414 (62%), Gaps = 7/414 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+ V L+ + P +GELC I P AEVVG+NG+ L +T G+
Sbjct: 23 GRIQDVSATLLNAWLPGVFMGELCCI----KPGEELAEVVGINGSKALLSPFTSTIGLHC 78
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEP-YSAKRYPVVASPPDAMTRKPIR 140
G V+A VPVG LLGRV+D + DG P K Y A PP AM R+PI
Sbjct: 79 GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYD--AMPPPAMVRQPIT 136
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
Q ++TGIRAIDS+ G GQR+GIF+ G+GKSTLL M+ +AD NV+ LIGERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FI+ L E K VIV ATSD+ AL R+R + AT IAE+FRD GK V+LL DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEP 320
+A A REI LA GE + Y P VFS+LP+LLER+G EKGSIT FYTVLVEGDDMNEP
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEP 316
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
++D VR +LDGHIVL R LAERG YPA++VL ++SR+ V+ + + +R L Y
Sbjct: 317 LADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALY 376
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
E E +I +G YQ+G D AID YP I FL Q D+ + ++KL I
Sbjct: 377 QEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430
>gi|115526263|ref|YP_783174.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
BisA53]
gi|115520210|gb|ABJ08194.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
BisA53]
Length = 441
Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats.
Identities = 197/431 (45%), Positives = 286/431 (66%), Gaps = 5/431 (1%)
Query: 10 NAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGL-KAEVVGLNGTIV 68
+ + + D + GRVV V ++E GP+ ++ +I+ + + L EV+G +G
Sbjct: 6 DQIGDLDGVMMYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVNRLIPCEVIGFSGNNA 65
Query: 69 QLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVV- 127
+M + ++GV+ G + + V LGRV++A+ + DGK P S P+
Sbjct: 66 VVMPFAGLEGVRRGCRAVIANAAAQVRPSAAWLGRVLNAMGEPIDGK-GPLSQGPSPMQF 124
Query: 128 -ASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
+PP A +RK + + G+RA+++ L RGQR+GIFAG+G+GKS LL M+ARN +AD
Sbjct: 125 RNAPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAD 184
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
V+VI L+GERGREV +F++ DLG EGL SV+V ATSD+ AL R + AY AIAEYFRD
Sbjct: 185 VSVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRD 244
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSIT 305
+ KDV+ L DSVTRFAMAQREIGL+ GEPP +GYTP+VF+ LPKLLER+G +G+IT
Sbjct: 245 EEKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLREGTIT 304
Query: 306 GFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPN 365
G +TVLV+GDD NEP++DAVRGILDGHIV++R +AERG+YPA+N+LKS+SR + + P
Sbjct: 305 GIFTVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMPKSADPA 364
Query: 366 TKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLK 425
KR R ++ Y++ E++I LGAY+ GSS +D++I + + ++L Q + L+
Sbjct: 365 YLPIIKRARQIMGTYSDMEELIRLGAYRAGSSPEVDESIQLHEPLENYLRQGKGEATSLR 424
Query: 426 DTLQKLSDITG 436
+ +L + G
Sbjct: 425 EGYAQLEQMLG 435
>gi|120554911|ref|YP_959262.1| flagellar protein export ATPase FliI [Marinobacter aquaeolei VT8]
gi|120324760|gb|ABM19075.1| flagellar protein export ATPase FliI [Marinobacter aquaeolei VT8]
Length = 463
Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats.
Identities = 205/434 (47%), Positives = 278/434 (64%), Gaps = 3/434 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
A+S+ + +GR+ R+ +E G VG+ C +I D+ ++AEVVG V L
Sbjct: 15 AISDEPAPELSGRLTRMVGLTLECVGCPMVVGDRC-LIQGDSATSVEAEVVGFEEDKVYL 73
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASP 130
M T ++G+K G VI VPVG +LGRVV+ DGK + R +
Sbjct: 74 MPLTAIEGLKPGARVIPLASASRVPVGPQMLGRVVNGAGDPLDGKGPLQAEARVQLTGDI 133
Query: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190
+ + R P+RQ + GIRAI++LL VG+GQRLG+FAG+G+GKS LLGM+ R T+AD+ V+
Sbjct: 134 INPLNRAPVRQSMDVGIRAINALLTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVV 193
Query: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250
LIGERGREV +FIE LG EGL SV+V+A +D S L R+R A T IAEY+RDQGK
Sbjct: 194 GLIGERGREVKEFIEDILGDEGLARSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKR 253
Query: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFY 308
V+LL DS+TR+A AQREI LA+GEPPAT+GY PSVF+ LP+L+ER+G GSIT FY
Sbjct: 254 VLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFY 313
Query: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368
TVL EGDD +PI+DA R ILDGHIVL R LAE G YPA++V SISR+ +V+
Sbjct: 314 TVLTEGDDQQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTDSEHFS 373
Query: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428
++R + + Y ++ D+I++GAY KGS D AI H + FL Q +++ A L + +
Sbjct: 374 RAQRFKQVYSRYQQARDLISVGAYVKGSDPETDFAIQHIGNMSQFLQQGLNESAPLTEAI 433
Query: 429 QKLSDITGIDIPPE 442
++L + PE
Sbjct: 434 EQLMAVVPERRSPE 447
>gi|74101650|gb|AAZ99740.1| FliIL [Aeromonas hydrophila]
Length = 443
Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats.
Identities = 201/417 (48%), Positives = 268/417 (64%), Gaps = 3/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
GR+VRV +E G +G+ C++ T L AEVVG N I LM + G+
Sbjct: 26 GRLVRVTGLTLEVVGCQLVMGQRCRVDTATGAP-LLAEVVGFNRDISYLMPLQPMSGLYA 84
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V+ ++ VG LLGRVVD L + DG+P +R + ASPP+ + R P+R+
Sbjct: 85 GARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRPLRDDGERVALFASPPNPLLRTPVRE 144
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ GIRAI+ LL VG+GQRLG+FAG+G+GKS LLGM+ RNT A + V+ LIGERGREV
Sbjct: 145 PLDVGIRAINGLLTVGKGQRLGLFAGSGVGKSMLLGMMTRNTTAQIVVVGLIGERGREVR 204
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIEH LGPEGL +V+V+A +DQS L R+R A IAEYFR+QG+DV+LL DS+TR+
Sbjct: 205 EFIEHSLGPEGLARAVVVAAPADQSPLMRLRAAQLCHRIAEYFREQGRDVLLLMDSLTRY 264
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI LAIGEPPATRGY PSVFS L +L+ER+ GT GS++ FYTVL EGDD +
Sbjct: 265 AQAQREIALAIGEPPATRGYPPSVFSMLTQLVERAGNGTHPDGSLSAFYTVLAEGDDQQD 324
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
P+ DA R ILDGHIVL R LAE G YPA+++ S+SR+ +V + + +R L
Sbjct: 325 PVVDAARAILDGHIVLTRRLAEEGHYPAIDIGASVSRVMPQVVPAEWQTLAVTLRQLWGR 384
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
Y + +++ LG YQ G+ +D+A+ YP I FL Q + + + L + G
Sbjct: 385 YQQVRELLPLGGYQPGADPQMDEAVQRYPAIAAFLQQGIHEETPFAQVMTGLKQVLG 441
>gi|33601562|ref|NP_889122.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
RB50]
gi|33575998|emb|CAE33078.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
RB50]
Length = 491
Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats.
Identities = 201/448 (44%), Positives = 278/448 (62%), Gaps = 29/448 (6%)
Query: 13 SETDPIKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQLM 71
+ T+P +GR+ R ++ + G VG C+I + + AEVVG +G + LM
Sbjct: 33 ASTEPWLVSGRITRAAGLVLHATGLRLPVGAACRIELARGHDHWADAEVVGFDGHTLYLM 92
Query: 72 SYTDVQGVKIGDLVIASGEILS----------------------VPVGNILLGRVVDALC 109
+D+ G+ G V+ + + +PVGN +LGRVVD
Sbjct: 93 PQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVDGAG 152
Query: 110 KSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTG 169
+ DG A++ P+ A P + ++R PI + G+RAI+ LL VGRGQR+G+FAG+G
Sbjct: 153 RPLDGLGPLAGAEQAPLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLFAGSG 212
Query: 170 IGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALA 229
+GKS LLGM+AR T AD+ V+ LIGERGREV +FIEH+LGPEGL SV+V+A +D S L
Sbjct: 213 VGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADVSPLL 272
Query: 230 RIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSL 289
R++GA AT +AE+FRDQG DV+L+ DS+TRFAMAQREI LAIGEPPAT+GY PSVF+ L
Sbjct: 273 RLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSVFAKL 332
Query: 290 PKLLERSG------TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERG 343
P L+ER+G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R+LAE G
Sbjct: 333 PALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHLAEAG 392
Query: 344 QYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDA 403
YPA+++ SISR + +R + +L Y + D+I++GAY G+ +DDA
Sbjct: 393 HYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQLDDA 452
Query: 404 IDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
I YPR+ +L Q + D + +L
Sbjct: 453 IARYPRLEAYLQQNIGDSVDYGTAIDQL 480
>gi|33596155|ref|NP_883798.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis
12822]
gi|33573158|emb|CAE36809.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis]
Length = 491
Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats.
Identities = 201/448 (44%), Positives = 278/448 (62%), Gaps = 29/448 (6%)
Query: 13 SETDPIKFTGRVVRVHDKLIESEGPVASVGELCQI-ITDDNPDGLKAEVVGLNGTIVQLM 71
+ T+P +GR+ R ++ + G VG C+I + + AEVVG +G + LM
Sbjct: 33 ASTEPWLVSGRITRAAGLVLHATGLRLPVGAACRIELARGHDHWADAEVVGFDGHTLYLM 92
Query: 72 SYTDVQGVKIGDLVIASGEILS----------------------VPVGNILLGRVVDALC 109
+D+ G+ G V+ + + +PVGN +LGRVVD
Sbjct: 93 PQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVDGAG 152
Query: 110 KSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTG 169
+ DG A++ P+ A P + ++R PI + G+RAI+ LL VGRGQR+G+FAG+G
Sbjct: 153 RPLDGLGPLAGAEQAPLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLFAGSG 212
Query: 170 IGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALA 229
+GKS LLGM+AR T AD+ V+ LIGERGREV +FIEH+LGPEGL SV+V+A +D S L
Sbjct: 213 VGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADVSPLL 272
Query: 230 RIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSL 289
R++GA AT +AE+FRDQG DV+L+ DS+TRFAMAQREI LAIGEPPAT+GY PSVF+ L
Sbjct: 273 RLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSVFAKL 332
Query: 290 PKLLERSG------TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERG 343
P L+ER+G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R+LAE G
Sbjct: 333 PALVERTGMGAPSPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHLAEAG 392
Query: 344 QYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDA 403
YPA+++ SISR + +R + +L Y + D+I++GAY G+ +DDA
Sbjct: 393 HYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQLDDA 452
Query: 404 IDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
I YPR+ +L Q + D + +L
Sbjct: 453 IARYPRLEAYLQQNIGDSVDYGTAIDQL 480
>gi|83647858|ref|YP_436293.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
gi|83635901|gb|ABC31868.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
Length = 456
Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats.
Identities = 201/436 (46%), Positives = 281/436 (64%), Gaps = 3/436 (0%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
+V+ Y V + GR+ RV +E+ G ++GE C +I ++AEV
Sbjct: 3 LVERLRNYERFVPAQARPELNGRLTRVVGLTLEAVGCPMTLGERC-LIEVRGGRMVEAEV 61
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
VG + V LM V+G++ G V + + VG LLGRV+D + DG+ +
Sbjct: 62 VGFSDERVYLMPLAAVEGLQPGAKVKPMSGVGRIGVGACLLGRVLDGAGEPLDGRGPLQA 121
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
+ +P + + R PIR+++ GIRAI+SLL VG GQRLG+FAG+G+GKS LLGM+
Sbjct: 122 EHHVELFGAPINPLHRAPIREKLDVGIRAINSLLTVGIGQRLGLFAGSGVGKSMLLGMMT 181
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R T AD+ V+ L+GERGREV +FIE LG EGL+ +V+V++ +D S L R+R A T I
Sbjct: 182 RFTTADIIVVGLVGERGREVKEFIEDILGEEGLRRAVVVASPADDSPLMRLRAAVLTTRI 241
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRD GK+V+LL DS+TR+A AQREI LA+GEPPAT+GY PSVF+ LP+L+ER+G +
Sbjct: 242 AEYFRDLGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAGNGK 301
Query: 301 K--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLS 358
GSIT FYTVL EGDD +PI+DA R ILDGHIVL+R LAE G YPA++V SISR+
Sbjct: 302 PGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRRLAEEGHYPAIDVEASISRVM 361
Query: 359 NRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV 418
+V+ P+ ++R + L Y ++ D+I++GAY GS D AI+ +P + FL Q +
Sbjct: 362 PQVTTPDYLQRAQRFKQLYARYQQTRDLISVGAYAPGSDKETDYAIERFPHMRKFLQQSL 421
Query: 419 DDPAKLKDTLQKLSDI 434
+ A L D+ Q L+ +
Sbjct: 422 RERATLNDSAQGLNQL 437
>gi|145298349|ref|YP_001141190.1| Polar flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851121|gb|ABO89442.1| Polar flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 443
Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats.
Identities = 199/412 (48%), Positives = 274/412 (66%), Gaps = 4/412 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G++ RV +E+ G A++G LC+I T D L+AEVVG +G + LM ++GV
Sbjct: 25 GKLTRVVGLTLEAIGCRAAIGALCRIDTQDGE--LEAEVVGFSGDRLFLMPSEQLKGVIP 82
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V+ E +PVG LLGRV+D + + DG S++ + ++R+PI Q
Sbjct: 83 GARVVPMTEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINPLSRRPIHQ 142
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI+++L VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ LIGERGREV
Sbjct: 143 PMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVK 202
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EG SV+V+A +D S L R++G TA AIAEYFRDQG +V+LL DS+TR+
Sbjct: 203 EFIEDILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRY 262
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE--KGSITGFYTVLVEGDDMNE 319
A AQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +GSIT F+TVL EGDD+ +
Sbjct: 263 AQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQD 322
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ V+ P D ++ ++
Sbjct: 323 PIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSL 382
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
Y ++ D+I +GAY +GS ID AI H P + FL Q + + + LQ L
Sbjct: 383 YQQNRDLITIGAYSQGSDPRIDRAIVHKPYLDQFLQQGMREVIHYDEGLQSL 434
>gi|88813204|ref|ZP_01128444.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
[Nitrococcus mobilis Nb-231]
gi|88789526|gb|EAR20653.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
[Nitrococcus mobilis Nb-231]
Length = 457
Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats.
Identities = 192/422 (45%), Positives = 274/422 (64%), Gaps = 3/422 (0%)
Query: 17 PIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDV 76
P+ G++ R+ +E+EG A+VG C +I ++ EVVG G + LM +
Sbjct: 26 PLVVEGQLQRMVGLTLEAEGCQAAVGSRCTVIAGAGAQ-VEVEVVGFAGDKLYLMPTGSL 84
Query: 77 QGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTR 136
G+ VI E VG LLGRV+D + DGK P + P+V + + R
Sbjct: 85 HGLTPNARVIPHAEACEARVGTGLLGRVLDGAGRPLDGKKLPRADATMPLVGRSINPLLR 144
Query: 137 KPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGER 196
PI++ + GIR I++LL VGRGQR+G+FAG+G+GKS LLGM+ R T AD+ V+ LIGER
Sbjct: 145 APIQRPLDVGIRTINALLTVGRGQRMGLFAGSGVGKSVLLGMMTRYTTADIVVVGLIGER 204
Query: 197 GREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFD 256
GREV +FI+H LG EGL +V+++A +D S L R+ GA ++IAEYFRD+G V+LL D
Sbjct: 205 GREVKEFIDHILGDEGLSRAVVIAAPADTSPLMRLHGALLTSSIAEYFRDRGCQVLLLMD 264
Query: 257 SVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS--EKGSITGFYTVLVEG 314
S+TR+A AQREIGLAIGEPP T+GY PSVF+ LP+L+ER+G + GSIT FYTVL EG
Sbjct: 265 SLTRYAQAQREIGLAIGEPPTTKGYPPSVFAKLPQLVERAGNGPVDGGSITAFYTVLTEG 324
Query: 315 DDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMR 374
DD N+P++DA R ILDGH+VL R LA+ G YPA+++ S SR + A R +
Sbjct: 325 DDHNDPVADAARAILDGHVVLSRELADAGHYPAIDIEASASRAMLNIITAEQLKAVHRFK 384
Query: 375 TLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
L Y +++D+IN+GAY+ GS+A +D+A+ + P + +L Q++D+ +++ +L D+
Sbjct: 385 NLYSLYRQNQDLINVGAYKAGSNARVDEAMAYQPELVRYLRQDIDEAVDFAESIAELLDL 444
Query: 435 TG 436
G
Sbjct: 445 LG 446
>gi|83591865|ref|YP_425617.1| ATPase FliI/YscN [Rhodospirillum rubrum ATCC 11170]
gi|83574779|gb|ABC21330.1| ATPase FliI/YscN [Rhodospirillum rubrum ATCC 11170]
Length = 475
Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats.
Identities = 203/421 (48%), Positives = 271/421 (64%), Gaps = 6/421 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVA--SVGELCQIITDDNPDGLKA 58
M +F N +++ + GRVV V L+E G SVG+ C +I D +
Sbjct: 1 MSAIFSNLLNDLAKLPERRIFGRVVGVQGMLVEIGGAQTNLSVGDRCAVIARDGRP-ITC 59
Query: 59 EVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE- 117
EV+G LM ++ + GV +G + ++ LGRV++A+ ++ DGK
Sbjct: 60 EVIGFRAARALLMPFSVLDGVGLGCRAEVIEGVPAIYPTRDWLGRVINAMGEAVDGKGAL 119
Query: 118 PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLG 177
P + + PP A +R+ + ++ G+RAI++ L RGQR+GIFAG+G+GKS+++
Sbjct: 120 PAGERAVAIRGRPPSAHSRQRVGGKLDLGVRAINTFLTCCRGQRMGIFAGSGVGKSSVMS 179
Query: 178 MIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTA 237
M RNTNADV V+ L+GERGRE +FIE DLG EGLK +V V ATSD+S L R + AY
Sbjct: 180 MFIRNTNADVIVMGLVGERGREAREFIEDDLGEEGLKRAVTVVATSDESPLMRRQAAYMT 239
Query: 238 TAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS- 296
A+AEYFRDQG DV+ L DSVTRFAMAQREI L+ GEPPA++GYTP+VF+ LPKLLER+
Sbjct: 240 LAVAEYFRDQGLDVLCLMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPKLLERAG 299
Query: 297 -GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSIS 355
G GSITG +TVLVEGDD NEPISDAVRGILDGHIVLDR +AERG+YPA+N+L+S+S
Sbjct: 300 PGVEGSGSITGLFTVLVEGDDHNEPISDAVRGILDGHIVLDRAIAERGRYPAINILRSVS 359
Query: 356 RLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLT 415
R + P + R L+ Y ++I LGAY+KGS D AI ++P + FLT
Sbjct: 360 RTMPGCNSPAENALVAKGRRLMAAYENMAELIRLGAYRKGSDPETDTAIHYHPALDAFLT 419
Query: 416 Q 416
Q
Sbjct: 420 Q 420
>gi|77165819|ref|YP_344344.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
[Nitrosococcus oceani ATCC 19707]
gi|76884133|gb|ABA58814.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
[Nitrosococcus oceani ATCC 19707]
Length = 480
Score = 360 bits (925), Expect = 9e-98, Method: Composition-based stats.
Identities = 194/416 (46%), Positives = 277/416 (66%), Gaps = 3/416 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
+ GR+ R+ +E+ G VG C I+ + ++AEVVG G + LM D +
Sbjct: 34 VTVEGRLTRMVGLTLEAVGCQLPVGGRCHILRQERLP-VEAEVVGFAGERLFLMPIGDPR 92
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRK 137
G+ VI + VG LLGRV+D + D + R + P + + R+
Sbjct: 93 GLVPNAPVIPLRHGGRMAVGEALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINPLARQ 152
Query: 138 PIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERG 197
PIR+ + G+ AI++LL +GRGQR+G+FAG+G+GKS LLGM+ R ADV V+ LIGERG
Sbjct: 153 PIREPMDVGVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERG 212
Query: 198 REVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDS 257
REV +FIE+ LG EGL SV+V+ +D S L RI GA AT+IAEYFRDQGK V+LL DS
Sbjct: 213 REVQEFIENILGKEGLARSVVVATPADHSPLMRIHGAMLATSIAEYFRDQGKQVLLLMDS 272
Query: 258 VTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT--SEKGSITGFYTVLVEGD 315
+TRF AQRE+ LAIGEPPATRGY PSVF+ +P+LLER+G S GSIT FYTVL EGD
Sbjct: 273 LTRFGHAQRELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGSITAFYTVLTEGD 332
Query: 316 DMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRT 375
D N+P++D+ R ILDGHIVL R LAE G YPA+++ SISR+ ++++ P + A+++ +
Sbjct: 333 DPNDPVADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQ 392
Query: 376 LLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
+ Y++++D+I++GAY +GS + +D+A+D P+ FL Q++ +K++L++L
Sbjct: 393 IYSLYSQNQDLISVGAYSRGSDSRLDEAVDRQPQFRSFLQQDMSQSFSVKESLERL 448
>gi|149908767|ref|ZP_01897428.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
gi|149808309|gb|EDM68248.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
Length = 444
Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats.
Identities = 196/414 (47%), Positives = 273/414 (65%), Gaps = 3/414 (0%)
Query: 19 KFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQG 78
K GR+VR++ +E G S+G+ C I T +N L AEVVG N I LM G
Sbjct: 23 KVYGRLVRINGLTLEVTGCRLSIGQRCFIETLNN-GSLAAEVVGFNRDISYLMPLQHAVG 81
Query: 79 VKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKP 138
+ G V I ++ VG LLGRVVD L + DG P + + P+ + P + ++R+P
Sbjct: 82 LFSGARVSPQSGIENIVVGEQLLGRVVDGLLQPLDGLP-AITGESIPLFSLPNNPLSRQP 140
Query: 139 IRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGR 198
I + I GIR I+++L G+GQRLG+FAG+G+GKS LLGM+ R T A++ ++ LIGERGR
Sbjct: 141 ISEPIDVGIRCINAVLTPGKGQRLGLFAGSGVGKSVLLGMMTRYTEAEIIIVGLIGERGR 200
Query: 199 EVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSV 258
EV +FIEH LG EG K +++V+A +D +AL R+R A +AE+FRDQGK V+LL DS+
Sbjct: 201 EVREFIEHSLGEEGRKRAIVVAAPADATALMRLRAAQVCHRLAEHFRDQGKHVLLLMDSL 260
Query: 259 TRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS-EKGSITGFYTVLVEGDDM 317
TR+A AQREIGLA+GEPPAT+GY PSVFS L +L+ER+G GS+T YTVLVEGD+
Sbjct: 261 TRYAQAQREIGLAMGEPPATKGYPPSVFSLLTQLVERAGNGLGSGSMTAIYTVLVEGDNQ 320
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
EPI+DA R ILDGHIVL R+LAE+G YPA+++ SISR+ +V + + +++ L
Sbjct: 321 QEPIADAARAILDGHIVLSRDLAEQGHYPAIDISASISRVMPQVVKKDYLAHAIKLKKLY 380
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
Y + ++I LG YQ G +D A+ +P I FL Q +D+ + L D++ +L
Sbjct: 381 SSYQQIRELIPLGGYQPGKDMQVDYAVQKFPAIAAFLQQGLDEQSGLSDSMNQL 434
>gi|71736661|ref|YP_275538.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557214|gb|AAZ36425.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 452
Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats.
Identities = 201/431 (46%), Positives = 277/431 (64%), Gaps = 4/431 (0%)
Query: 8 YTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNG 65
Y ++S GR++R+ +E+EG A++G C +I DD+ P ++AEV+G +G
Sbjct: 15 YAESISLPAQPVVEGRLLRMVGLTLEAEGLRAAMGSRCVVINDDSHHPVEVEAEVMGFSG 74
Query: 66 TIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYP 125
V LM V G+ G V+ + +P+G +LGRV+D + DG+ + P
Sbjct: 75 GKVFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVP 134
Query: 126 VVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNA 185
+ + + R PI Q + GIR I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A
Sbjct: 135 MDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEA 194
Query: 186 DVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFR 245
D+ V+ LIGERGREV +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFR
Sbjct: 195 DIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFR 254
Query: 246 DQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GS 303
D+GK+V+LL DS+TRFA AQREI LAIGEPPAT+GY PSVF+ LPKL+ER+G +E GS
Sbjct: 255 DKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGS 314
Query: 304 ITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSG 363
IT FYTVL EGDD +PI+D+ RG+LDGHIVL R LAE G YPA+++ SISR+ V
Sbjct: 315 ITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVS 374
Query: 364 PNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAK 423
P ++ + L Y ++ D+I++GAY G D AI +P + + Q + D
Sbjct: 375 PEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434
Query: 424 LKDTLQKLSDI 434
++ + + L+ I
Sbjct: 435 MQGSGEALASI 445
>gi|58040126|ref|YP_192090.1| flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
gi|58002540|gb|AAW61434.1| Flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
Length = 452
Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats.
Identities = 195/396 (49%), Positives = 267/396 (67%), Gaps = 8/396 (2%)
Query: 56 LKAEVVGLNGTIVQLMSYTDVQGVKIG--DLVIASGEILSVPVGNILLGRVVDALCKSAD 113
+++EVVG G + +LMS+ + G+ G + + + V LGRV+D L + D
Sbjct: 56 VQSEVVGFQGDVARLMSFGPLDGIGPGCEARIPLNRHDGGLGVNESWLGRVLDPLGQPID 115
Query: 114 GK-PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGK 172
GK P S +R PV PP+A +R + +RI G+RA+D+ RGQRLG+FAG+G+GK
Sbjct: 116 GKGPLFPSFERQPVQCPPPNAASRARLGERIDLGVRALDTFTTCRRGQRLGLFAGSGVGK 175
Query: 173 STLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIR 232
STLL M+AR + DV VI+L+GERGREV +FIE DLGPEGL SV+V ATSD L R
Sbjct: 176 STLLSMLARGADCDVAVISLVGERGREVREFIEDDLGPEGLARSVLVIATSDSPPLMRRE 235
Query: 233 GAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKL 292
A +A AIAEYFR+QGK V+LL DSVTRF MA REIGL+ GEPPATRGY PSVF+ LP+L
Sbjct: 236 AALSAMAIAEYFRNQGKSVLLLMDSVTRFCMALREIGLSAGEPPATRGYPPSVFAELPRL 295
Query: 293 LERSGT--SEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNV 350
LER+G +++G IT +TVLVEGDD NEP++DAVRGILDGHI+LDR + E+G+YPA++V
Sbjct: 296 LERAGPGYADQGMITALFTVLVEGDDQNEPVADAVRGILDGHIILDRKIGEQGRYPAIDV 355
Query: 351 LKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRI 410
L+S+SR + P ++R R + Y DMI LGAY+ G+ +D+AI P++
Sbjct: 356 LRSLSRAVPGCNSPEENALTQRARAAMATYQRMADMIRLGAYKPGTDREVDEAIALMPKL 415
Query: 411 YDFLTQEVDDPAKLKDTLQKLSDITGI---DIPPEE 443
+FL+Q ++ + ++L+ I + ++PP E
Sbjct: 416 NEFLSQGRNERTTRAEAFEQLAQIMQMPLKNLPPNE 451
>gi|149377885|ref|ZP_01895614.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
gi|149357827|gb|EDM46320.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
Length = 460
Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 204/420 (48%), Positives = 276/420 (65%), Gaps = 4/420 (0%)
Query: 14 ETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSY 73
E+ P + +GR+ R+ +E G VG+ C +IT ++AEVVG V LM
Sbjct: 19 ESQP-ELSGRLTRMVGLTLECVGCPMVVGDRC-VITGQGAGTVEAEVVGFEDDRVYLMPL 76
Query: 74 TDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDA 133
T ++G++ G V+ VPVG LLGRVV+ + DGK + R + +
Sbjct: 77 TAIEGLRPGARVVPLSVASRVPVGPELLGRVVNGNGEPLDGKGPLQAEARVSLSGDIINP 136
Query: 134 MTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALI 193
+ R P+RQ + GIRAI+SL+ VG+GQRLG+FAG+G+GKS LLGM+ R TNAD+ V+ LI
Sbjct: 137 LDRAPVRQSMDVGIRAINSLMTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADITVVGLI 196
Query: 194 GERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVML 253
GERGREV +FIE LG EGL SV+V++ +D S L R+R A T IAEY+RDQGK V+L
Sbjct: 197 GERGREVKEFIEDILGDEGLARSVVVASPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLL 256
Query: 254 LFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVL 311
L DS+TR+A AQREI LA+GEPPAT+GY PSVF+ LP+L+ER+G GSIT FYTVL
Sbjct: 257 LMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVL 316
Query: 312 VEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASK 371
EGDD +PI+DA R ILDGHIVL R LAE G YPA++V SISR+ +V+ ++
Sbjct: 317 TEGDDQQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFARAQ 376
Query: 372 RMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
R + + Y ++ D+I++GAY KGS D AI H + FL Q +++ A L+D++Q+L
Sbjct: 377 RFKQVYSRYQQARDLISVGAYVKGSDPETDFAITHIGNMGQFLQQGLNESAPLQDSIQQL 436
>gi|55977138|gb|AAV68359.1| FliI [Herminiimonas arsenicoxydans]
Length = 471
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 200/441 (45%), Positives = 284/441 (64%), Gaps = 23/441 (5%)
Query: 16 DPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
+P+ +GR+ RV ++E+ G +VG C I N ++AEVVG + LM +D
Sbjct: 30 EPMLVSGRITRVAGLVMEAVGLKLAVGSACTIPLA-NGARIEAEVVGFEDDRLFLMPQSD 88
Query: 76 VQGVKIGDLVIA--------------------SGEILSVPVGNILLGRVVDALCKSADGK 115
V+G+ G V S +PVG LLGRV+D + D
Sbjct: 89 VEGIVPGTRVFPVEVVQSLPKPGAVSHPRRRPSDRTRHLPVGMELLGRVLDGAGRPLDSL 148
Query: 116 PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTL 175
++ P+ + +TR PI + G+RAI+S+L VGRGQR+G+FAG+G+GKS L
Sbjct: 149 GPLHATHSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVL 208
Query: 176 LGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAY 235
LGM+AR T ADV V+ LIGERGREV +FIE LGPEGL SV+V+A +D L R++GA
Sbjct: 209 LGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVVVAAPADTPPLMRLQGAA 268
Query: 236 TATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLER 295
TAIAE+FRD+GKDV+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER
Sbjct: 269 YTTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 328
Query: 296 SGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKS 353
+G ++ GSIT FYTVL EGDD +PI+DA R ILDGHIVL+R+LAE G YPA+++ +S
Sbjct: 329 AGNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRSLAEAGHYPAIDIEQS 388
Query: 354 ISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDF 413
ISR + ++ P + +++++ L Y + D+I++GAY GS +D+AI +I F
Sbjct: 389 ISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAGSDPVLDEAIALNTKIESF 448
Query: 414 LTQEVDDPAKLKDTLQKLSDI 434
L Q++ + + + ++L +L+ +
Sbjct: 449 LQQDITERSGINESLGQLASL 469
>gi|149928159|ref|ZP_01916405.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
[Limnobacter sp. MED105]
gi|149823144|gb|EDM82382.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
[Limnobacter sp. MED105]
Length = 468
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 204/466 (43%), Positives = 286/466 (61%), Gaps = 28/466 (6%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
+++ D+ V + P TG++ RV ++E+ G VG +C ++ P L+AEV
Sbjct: 4 LLEWIDECKFLVEHSQPQIATGKLTRVAGLVMEAVGLKLPVGSVCTVVQKGAPP-LEAEV 62
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIAS--------------------GEILSVPVGNIL 100
VG NG + LM TDV G+ G VIA + +PVG+ L
Sbjct: 63 VGFNGDKLFLMPATDVHGMTPGAKVIAQEPPPIAPKLGVKAHPWRRPEDKTKHLPVGDSL 122
Query: 101 LGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQ 160
LGRVVD+ + D E KR P+ A P + + R+PI + + G+RAI++LL VGRGQ
Sbjct: 123 LGRVVDSNGRPLDTLGELKFEKRSPLAARPINPLEREPITEPLDVGVRAINALLTVGRGQ 182
Query: 161 RLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVS 220
R+G+ AG+G+GKS LLGM+AR T AD V+ LIGERGREV +FIE LG EGLK SV+++
Sbjct: 183 RIGLMAGSGVGKSVLLGMMARYTKADRVVVGLIGERGREVKEFIEQILGEEGLKRSVVIA 242
Query: 221 ATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRG 280
A +D S L R++GA +AE+FRDQG +V+++ DS+TR+AMAQREI LAIGEPPAT+G
Sbjct: 243 APADVSPLLRMQGAAYTQVVAEHFRDQGHNVLMIMDSLTRYAMAQREIALAIGEPPATKG 302
Query: 281 YTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRN 338
Y PSVF+ LP L+ER+G K GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R
Sbjct: 303 YPPSVFAKLPTLVERAGNGRKGAGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 362
Query: 339 LAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSA 398
LAE G YPA+++ +SISR + + +A++ ++ + D+I +GAY G+
Sbjct: 363 LAESGHYPAIDIEQSISRAMHNIVPAGHLNAARGLKAAFSRVQRNRDLITVGAYSPGADP 422
Query: 399 AIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITGIDIPPEEF 444
+D ++ YP+I + L Q + + A + L L + P EF
Sbjct: 423 QLDHSLALYPKIENLLQQSMLESASFDEALAGLQSLF-----PNEF 463
>gi|88858105|ref|ZP_01132747.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
gi|88819722|gb|EAR29535.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
Length = 442
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 203/436 (46%), Positives = 280/436 (64%), Gaps = 5/436 (1%)
Query: 3 DLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVG 62
D +Y + + P G + RV +E+ G A VG CQI T + + AEVVG
Sbjct: 8 DKISQYQKHIRKVPP-AVAGSLTRVVGLTLEARGVKAPVGSQCQIETLNG--FIDAEVVG 64
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
NG ++ LM + GV G VI + +PVG LLGRVVD L + DG + K
Sbjct: 65 FNGDVLYLMPNDALSGVLPGARVIPQVKEAGLPVGMSLLGRVVDGLGRPIDGLGPIKAEK 124
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
+ + + + R+ I Q + G+RAI++++ VG+GQR+G+FAG+G+GKS LLGM+ R
Sbjct: 125 KLKFAQNAINPLARRAITQPMDVGVRAINAVITVGQGQRMGLFAGSGVGKSVLLGMMTRG 184
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T+ADV V+ L+GERGREV +FIE LG EG K SV+V+A +D S L R++G TA IAE
Sbjct: 185 TSADVIVVGLVGERGREVKEFIEEILGDEGRKRSVVVAAPADASPLMRLKGCETAVTIAE 244
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRDQG +V+LL DSVTR+AMAQREI LA+GEPPAT+GY PSVF+ LP L+ER+G K
Sbjct: 245 YFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGKG 304
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT F+TVL EGDDM +PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ +
Sbjct: 305 QGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKSISRVMPQ 364
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V ++ ++ + Y +++D+I LGAYQKG+ +D +I P + FL Q + +
Sbjct: 365 VVSEAHMQQARVLKQVYSLYQQNKDLITLGAYQKGADPILDKSISMMPMVNGFLQQTMKE 424
Query: 421 PAKLKDTLQKLSDITG 436
++L L+ + G
Sbjct: 425 VIPYDESLSGLARLLG 440
>gi|77957924|ref|ZP_00821967.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia bercovieri ATCC 43970]
Length = 455
Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats.
Identities = 204/439 (46%), Positives = 282/439 (64%), Gaps = 10/439 (2%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGL 63
DK+ +S++ I+ GR+VR ++E+ G +G C I DN +++EVVG
Sbjct: 14 DKFEERISQSTTIRRYGRLVRATGLVLEATGLQLPLGATCLIERYDNGEVQEVESEVVGF 73
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKPE 117
NG + LM +V+G+ G V A + +P+G LLGRV+D K DG P
Sbjct: 74 NGQRLFLMPLEEVEGIVPGARVYARMTTGGASASKQLPLGPELLGRVLDGSAKPLDGLPA 133
Query: 118 PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLG 177
P + R P++ P + + R I Q + G+R I++LL VGRGQR+G+FAG+G+GKS LLG
Sbjct: 134 PETGYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLG 193
Query: 178 MIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTA 237
M+AR T ADV V+ LIGERGREV DFIE+ LGPEG SV+++A +D S L R++GA A
Sbjct: 194 MMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLRMQGAAYA 253
Query: 238 TAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS- 296
T IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 254 TRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 313
Query: 297 -GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSIS 355
G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G YPA+++ SIS
Sbjct: 314 NGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASIS 373
Query: 356 RLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLT 415
R + N ++ + LL Y + D++++GAY GS +D AI YP++ FL
Sbjct: 374 RAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQ 433
Query: 416 QEVDDPAKLKDTLQKLSDI 434
Q + + + +D Q L +
Sbjct: 434 QGMYERSSYEDACQHLKSL 452
>gi|82702477|ref|YP_412043.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
gi|82410542|gb|ABB74651.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
Length = 470
Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats.
Identities = 201/433 (46%), Positives = 274/433 (63%), Gaps = 23/433 (5%)
Query: 17 PIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDV 76
P + +G + RV ++E+ G +VG C I+ N + ++AEVVG +G + LM +
Sbjct: 26 PFQISGSLTRVTGLIMEATGLKLAVGSGCTILMP-NGNSMEAEVVGFHGDRLYLMPAHGM 84
Query: 77 QGVKIGDLVI--------------------ASGEILSVPVGNILLGRVVDALCKSADGKP 116
G+ G V+ AS +I PVG LLGRVVD + D
Sbjct: 85 FGLAPGAKVVPWDRTGVLPNPGSASRQRRRASDQISRFPVGEALLGRVVDGTGRPLDNLG 144
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
+ SP + + R+PI + + G+RAI++LL VGRGQR+G+FAG+G+GKS LL
Sbjct: 145 PLEVERSASAAGSPINPLDREPISEVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLL 204
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+AR T+AD+ V+ LIGERGREV DFIE LG EGL SV+V+A +D L R++GA
Sbjct: 205 GMMARYTSADIIVVGLIGERGREVKDFIEQILGAEGLARSVVVAAPADTWPLMRLQGASY 264
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
AT++AEYFRDQGK+V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP+L+ER+
Sbjct: 265 ATSVAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPQLVERA 324
Query: 297 GTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G K GSIT FYTVL EGDD +PI+DA R ILDGHIVL R LAE G YPA+++ SI
Sbjct: 325 GNGVKGSGSITAFYTVLAEGDDQQDPIADAARAILDGHIVLSRQLAESGHYPAIDIEASI 384
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR + P + + + L Y S D+I++GAY G+ +D AI YP++ FL
Sbjct: 385 SRAMTSLISPEYFEQVRNFKQLFSRYQRSRDLISVGAYSPGNDRLLDRAIALYPKLEHFL 444
Query: 415 TQEVDDPAKLKDT 427
Q + + A +++
Sbjct: 445 QQTMVERAGYEES 457
>gi|77978145|ref|ZP_00833578.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia intermedia ATCC 29909]
Length = 445
Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats.
Identities = 198/424 (46%), Positives = 269/424 (63%), Gaps = 10/424 (2%)
Query: 16 DPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
D I + G ++ V L+ + P ++GELC+I + D + AEVV + L +T
Sbjct: 25 DGIAYRGPILDVGPTLLRANLPGVALGELCRIASPD----MLAEVVAIEQQTALLSPFTS 80
Query: 76 VQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMT 135
G++ G V G V VG LLGRV+D L + DG P R + PP+ +
Sbjct: 81 SAGLRSGQWVSPLGHSHRVKVGPSLLGRVLDGLGGAMDGGPSLIGHWR-ELDCQPPEPLA 139
Query: 136 RKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGE 195
R+PIRQ + TGIRAID +L+ G GQR+GIFA G+GKS+LL M+ +NADV V+ALIGE
Sbjct: 140 RQPIRQILTTGIRAIDGVLSCGEGQRVGIFAAAGVGKSSLLSMLCAGSNADVMVLALIGE 199
Query: 196 RGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLF 255
RGREV +F++ L PE +V+V ATSD+ AL R++G YTAT +AEYFR++G V+L+
Sbjct: 200 RGREVREFLDQVLTPETRARTVVVVATSDRPALERLKGIYTATTVAEYFRERGLKVLLMV 259
Query: 256 DSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGD 315
DS+TR+A A REIGLA GE PA + PSVF++LP+LLER+G SE GSIT FYTVLVEGD
Sbjct: 260 DSLTRYARAAREIGLAAGELPAAGSFPPSVFAALPRLLERAGNSECGSITAFYTVLVEGD 319
Query: 316 DMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRT 375
DMNEP++D VR +LDGHIVL R LA G YPA+++ S+SR+ ++ ++++R
Sbjct: 320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVTVEHLALAQKLRQ 379
Query: 376 LLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV-----DDPAKLKDTLQK 430
+ Y E E ++ +G YQ G DDA+ YP+I FL QE D L TL++
Sbjct: 380 IQACYQEIELLVRVGEYQAGQDPQADDALQRYPKICAFLQQENALSCHSDAVSLNHTLEQ 439
Query: 431 LSDI 434
L I
Sbjct: 440 LGQI 443
>gi|146282926|ref|YP_001173079.1| flagellum-specific ATP synthase FliI [Pseudomonas stutzeri A1501]
gi|145571131|gb|ABP80237.1| flagellum-specific ATP synthase FliI [Pseudomonas stutzeri A1501]
Length = 459
Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats.
Identities = 199/434 (45%), Positives = 278/434 (64%), Gaps = 4/434 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVG 62
F+ Y A+ GR++R+ +E+EG A+VG C +I DD+ P ++AEV+G
Sbjct: 19 FETYEAAIKLPSQPLLEGRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPTEVEAEVMG 78
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK 122
+ + LM + G+ G V+ +P+G +LGRV+D ++ DGK +
Sbjct: 79 FSSGKLYLMPVGSLAGIAPGARVVPLVNTGRLPMGMSMLGRVLDGAGRALDGKGGMRAED 138
Query: 123 RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARN 182
P+ + + R PI + + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R
Sbjct: 139 WVPMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRF 198
Query: 183 TNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAE 242
T AD+ V+ LIGERGREV +FIE+ LG E +K SV+V++ +D + L R+R A T IAE
Sbjct: 199 TEADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRAAQYCTRIAE 258
Query: 243 YFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK- 301
YFRD+GK+V+LL DS+TR+A AQREI LAIGEPPAT+GY PSVF+ LP L+ER+G +E+
Sbjct: 259 YFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAERG 318
Query: 302 -GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNR 360
GSIT FYTVL EGDD +PI+DA RG+LDGHIVL R LAE G YPA+++ SISR+ +
Sbjct: 319 GGSITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQ 378
Query: 361 VSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
V AS+R + L Y +S D+I++GAY G D AI + +L Q +D+
Sbjct: 379 VVSAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVSYLRQGLDE 438
Query: 421 PAKLKDTLQKLSDI 434
L + +L+ +
Sbjct: 439 SEGLSQSAAQLAAV 452
>gi|153005077|ref|YP_001379402.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. Fw109-5]
gi|152028650|gb|ABS26418.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. Fw109-5]
Length = 434
Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats.
Identities = 196/428 (45%), Positives = 279/428 (65%), Gaps = 1/428 (0%)
Query: 7 KYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGT 66
++ +A+ P++ GRV R+ +IE+E GE +I+T + L AEVVG
Sbjct: 6 RHRDALDRAAPLRLRGRVTRLVGLVIEAEAAGVRQGEAVEILTPGR-EPLLAEVVGFRDE 64
Query: 67 IVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
L+ D G+ ++++G LS+ G+ LLGRV+D L + DG P P S + + V
Sbjct: 65 RAVLLPLGDPAGLGADSEIVSTGRPLSIRAGDGLLGRVLDGLGRPLDGLPLPASLEEWAV 124
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
P + R+ I + G+RAID LL VG GQR+GIFAG G+GKSTLLG IAR+T A+
Sbjct: 125 DRPAPGPLARRRITAPLALGVRAIDGLLTVGEGQRIGIFAGAGVGKSTLLGQIARHTRAE 184
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
++VI L+GERGREV +F+E LGPEGL SV+V+ATSD AL R++ A+ AT IAE+F +
Sbjct: 185 LSVICLVGERGREVREFVEEALGPEGLARSVVVAATSDAPALERLKAAHVATGIAEWFAE 244
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITG 306
+ + V+ + DS+TR+A AQRE+GLA GEPPA GY PSVF++LP+LLER+G +G IT
Sbjct: 245 RDRRVLFMLDSLTRYARAQREVGLAAGEPPARHGYPPSVFAALPRLLERTGNRARGGITA 304
Query: 307 FYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNT 366
YTVLV G D++EPI+D VRGILDGH+VLD +A G+YPA++VL+S+SR+ V+ +
Sbjct: 305 LYTVLVAGGDLDEPIADEVRGILDGHVVLDPRVAAAGRYPAIDVLRSLSRVMPAVTTDSH 364
Query: 367 KDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKD 426
+ A+ R+R LL + D+I +GAY +GS D+A+ P I FL Q D+ +
Sbjct: 365 RAAADRLRALLAAHERHRDLIAVGAYARGSDPDADEALARLPAIEAFLRQRADEAEAPER 424
Query: 427 TLQKLSDI 434
T +L ++
Sbjct: 425 TRARLEEL 432
>gi|67154575|ref|ZP_00416320.1| ATPase FliI/YscN [Azotobacter vinelandii AvOP]
gi|67088708|gb|EAM08174.1| ATPase FliI/YscN [Azotobacter vinelandii AvOP]
Length = 459
Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats.
Identities = 204/443 (46%), Positives = 287/443 (64%), Gaps = 14/443 (3%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG----LKAEV 60
D + E P + +GR+VR ++E+ G +G +C+I P G +AEV
Sbjct: 14 LDGLQRRLDELPPYRRSGRIVRATGMVLEAVGLDIPLGGVCRIELAAQPGGEARQAEAEV 73
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGE------ILSVPVGNILLGRVVDALCKSADG 114
VG G + LM ++ G++ G V GE P+G LLGRVVD+ + DG
Sbjct: 74 VGFAGERLFLMPLEEIAGLRPGARVFPLGEGGDALGARRFPLGERLLGRVVDSSGQPLDG 133
Query: 115 KPEPYSAKRYPVVASPP-DAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKS 173
P + + +PP + + R PI ++I GIRAI+ LL+VGRGQR+G+FAG+G+GKS
Sbjct: 134 L-GPLDGVHHASLHTPPLNPLHRAPIDRQIDVGIRAINGLLSVGRGQRMGLFAGSGVGKS 192
Query: 174 TLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGM+AR T ADV V+ LIGERGREV DFI++ LG EGL+ SV+V+A +D S L R++G
Sbjct: 193 VLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAEGLRRSVVVAAPADNSPLQRLQG 252
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
A AT +AE FRD G+DV+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP+L+
Sbjct: 253 AAYATRLAEDFRDAGRDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPRLV 312
Query: 294 ERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVL 351
ER+G + GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++
Sbjct: 313 ERTGNGPRGGGSITAFYTVLSEGDDQQDPIADSARAILDGHIVLSRALAESGHYPAIDIE 372
Query: 352 KSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIY 411
SISR + + +++ + L Y + D+I++GAY G +D A++ YP++
Sbjct: 373 ASISRAMTAIVDDAQQRKAQQFKQSLSRYQRNRDLISVGAYAPGHDPQLDRAVNLYPQLE 432
Query: 412 DFLTQEVDDPAKLKDTLQKLSDI 434
FL Q +D+ A +++TL+ L+ +
Sbjct: 433 RFLQQRIDERAGIEETLKALNAV 455
>gi|16760916|ref|NP_456533.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29141392|ref|NP_804734.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
gi|25290438|pir||AE0752 flagellum-specific ATP synthase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503213|emb|CAD05720.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137019|gb|AAO68583.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 456
Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats.
Identities = 205/443 (46%), Positives = 282/443 (63%), Gaps = 15/443 (3%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAEVVG 62
D + ++ ++ GR+ R ++E+ G +G C I D P+ +++EVVG
Sbjct: 12 LDNFEAKMALLPAVRRYGRLTRATGLVLEATGLQLPLGATCIIERQDGPETKEVESEVVG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA---------SGEILSVPVGNILLGRVVDALCKSAD 113
NG + LM +V+G+ G V A SG+ L P+G LLGRV+D K D
Sbjct: 72 FNGQRLFLMPLEEVEGILPGARVYARNGHGDGLQSGKQL--PLGPALLGRVLDGGGKPLD 129
Query: 114 GKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKS 173
G P P + + ++ P + + R PI + TG+RAI++LL VGRGQR+G+FAG+G+GKS
Sbjct: 130 GLPAPDTLETGALITPPFNPLQRTPIEHVLETGVRAINALLTVGRGQRMGLFAGSGVGKS 189
Query: 174 TLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGM+AR T ADV V+ LIGERGREV DFIE+ LGP+G SV+++A +D S L R++G
Sbjct: 190 VLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQG 249
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
A AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+
Sbjct: 250 AAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV 309
Query: 294 ERSGTS--EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVL 351
ER+G GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++
Sbjct: 310 ERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIE 369
Query: 352 KSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIY 411
SISR + + + LL + + D+I++GAY KGS +D AI +P++
Sbjct: 370 ASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYAKGSDPMLDKAITLWPQLE 429
Query: 412 DFLTQEVDDPAKLKDTLQKLSDI 434
FL Q + + A +D+LQ L I
Sbjct: 430 AFLQQGIFERADWEDSLQALDLI 452
>gi|118592622|ref|ZP_01550012.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
gi|118434673|gb|EAV41324.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
Length = 460
Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats.
Identities = 197/425 (46%), Positives = 269/425 (63%), Gaps = 1/425 (0%)
Query: 11 AVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQL 70
AV + + G+V +V ++ + +GE+ ++ T L+AEVVG L
Sbjct: 34 AVDKKNLYSVNGKVSKVIGTVVYAVVSNVRIGEIVELYTRSTGRKLEAEVVGFANNEALL 93
Query: 71 MSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKR-YPVVAS 129
+ + QGV V +G++ SVPVG LLGRV+D DGK + + YPV
Sbjct: 94 YPFGETQGVSPQTEVRPTGKVQSVPVGEHLLGRVIDGFGNFIDGKSDECCPQTFYPVYQK 153
Query: 130 PPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNV 189
PP+ MTR+ I + TGIRAID LL +G GQR+GIFA G+GKSTLL M+ +N + DV V
Sbjct: 154 PPNPMTRRVIDAPVTTGIRAIDGLLTLGEGQRIGIFAAAGVGKSTLLSMLVKNADVDVTV 213
Query: 190 IALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK 249
+A++GERGREV +FIE +LG EG+K +V+V +TSD+S + R++ +Y ATA+AEYFRDQGK
Sbjct: 214 MAMVGERGREVKEFIERELGQEGMKRTVLVVSTSDKSPMERVKASYAATAVAEYFRDQGK 273
Query: 250 DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYT 309
V+ L DSVTRFA A REIGLA GE P RG+ PSVF+SLPKLLER G ++KGSIT YT
Sbjct: 274 KVLFLMDSVTRFARALREIGLAAGELPTRRGFPPSVFASLPKLLERVGMNDKGSITAMYT 333
Query: 310 VLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDA 369
VLVEGDDMNEP++D R ILDGHI+L LA +PA+++L S SR+ + V ++
Sbjct: 334 VLVEGDDMNEPVADETRSILDGHIILSSKLAAAHHFPAIDILNSKSRVMDMVISDEHREL 393
Query: 370 SKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQ 429
+ R LL Y++ E ++ +G YQ GS D A+ I +FL Q + + TL
Sbjct: 394 AAITRNLLAAYSDVELLVKIGEYQAGSDPVADLAVAKIQDINEFLRQGDEPFEDIDGTLD 453
Query: 430 KLSDI 434
+L +
Sbjct: 454 RLRSV 458
>gi|77961116|ref|ZP_00824962.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia mollaretii ATCC 43969]
Length = 454
Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats.
Identities = 203/440 (46%), Positives = 281/440 (63%), Gaps = 10/440 (2%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVG 62
DK+ +S++ I+ GR+ R ++E+ G +G C I DN +++EVVG
Sbjct: 12 LDKFEERISQSTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERYDNGEVQEVESEVVG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKP 116
NG + LM +V+G+ G V A + +P+G LLGRV+D K DG P
Sbjct: 72 FNGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGSAKPLDGLP 131
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
P + R P++ P + + R I Q + G+R I++LL VGRGQR+G+FAG+G+GKS LL
Sbjct: 132 APETGYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLL 191
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+AR T ADV V+ LIGERGREV DFIE+ LGPEG SV+++A +D S L R++GA
Sbjct: 192 GMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLRMQGAAY 251
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 252 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 311
Query: 297 --GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G + GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G YPA+++ SI
Sbjct: 312 GNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASI 371
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR + N ++ + LL Y + D++++GAY GS +D AI YP++ FL
Sbjct: 372 SRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFL 431
Query: 415 TQEVDDPAKLKDTLQKLSDI 434
Q + + + +D Q L +
Sbjct: 432 QQGMYERSSYEDACQHLKSL 451
>gi|123442767|ref|YP_001006744.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089728|emb|CAL12581.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 443
Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats.
Identities = 203/439 (46%), Positives = 281/439 (64%), Gaps = 10/439 (2%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGL 63
DK+ +S++ I+ GR+ R ++E+ G +G C I DN +++EVVG
Sbjct: 2 DKFEERISQSTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHDNGEVQEVESEVVGF 61
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKPE 117
NG + LM +V+G+ G V A + +P+G LLGRV+D K DG P
Sbjct: 62 NGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGSAKPLDGLPA 121
Query: 118 PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLG 177
P + R P++ P + + R I Q + G+R I++LL VGRGQR+G+FAG+G+GKS LLG
Sbjct: 122 PETGYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLG 181
Query: 178 MIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTA 237
M+AR T ADV V+ LIGERGREV DFIE+ LGPEG SV+++A +D S L R++GA A
Sbjct: 182 MMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLRMQGAAYA 241
Query: 238 TAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS- 296
T IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 242 TRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 301
Query: 297 -GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSIS 355
G S GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G YPA+++ SIS
Sbjct: 302 NGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASIS 361
Query: 356 RLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLT 415
R + N ++ + LL + + D++++GAY GS +D AI YP++ FL
Sbjct: 362 RAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQ 421
Query: 416 QEVDDPAKLKDTLQKLSDI 434
Q + + + +D Q L +
Sbjct: 422 QGMFERSSYEDACQHLKSL 440
>gi|118708579|ref|ZP_01561163.1| type III secretion apparatus H+-transporting two-sector ATPase
[Burkholderia cenocepacia MC0-3]
gi|118654021|gb|EAV60802.1| type III secretion apparatus H+-transporting two-sector ATPase
[Burkholderia cenocepacia MC0-3]
Length = 449
Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats.
Identities = 189/399 (47%), Positives = 267/399 (66%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V+ LI G GELC++ T AEVVG + L + + G+
Sbjct: 35 GKVMDALGTLIRVSGIDVRYGELCELRTGQGELMQCAEVVGFSRDTALLSPFGRLDGLSR 94
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
V+A L++PVG+ L GRVVD++ + DG+ + + + A+PPDAM+R + +
Sbjct: 95 DTQVVALRRPLAIPVGSALFGRVVDSMGRPIDGRGPIDTTETAALYAAPPDAMSRPLLER 154
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ TG+R +D L+ +G GQR+GIFA G+GKSTL+GM AR T D+NVIALIGERGREV
Sbjct: 155 SLDTGVRVVDGLMTLGEGQRVGIFAPAGVGKSTLMGMFARGTRCDLNVIALIGERGREVR 214
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LGPEG+ S++V ATSD+S++ R++ AY+ATAIAEYFRD+GK V+L+ DS+TRF
Sbjct: 215 EFIEQILGPEGIARSIVVCATSDRSSIERVKAAYSATAIAEYFRDRGKRVLLMMDSLTRF 274
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEPI 321
A AQREIGLA GEPPA RG+ PS+F+ LP+LLER+G SE GSIT YTVL E + ++P+
Sbjct: 275 ARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGLSEHGSITALYTVLAEDESGSDPV 334
Query: 322 SDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYT 381
++ VRGILDGH++L R +A R QYPA++VL S+SR+ +V+ ++A+ +R LL +
Sbjct: 335 AEEVRGILDGHMILSREIAARNQYPAIDVLASLSRVMPQVTDDAHREAAGHVRRLLAKHR 394
Query: 382 ESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+ E ++ LG Y+ G D+A+ I FL Q D+
Sbjct: 395 DIETLLQLGEYRAGGDPVADEAVRKIEAIRQFLCQRTDE 433
>gi|16765310|ref|NP_460925.1| flagellum-specific ATP synthase [Salmonella typhimurium LT2]
gi|62180547|ref|YP_216964.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|120332|sp|P26465|FLII_SALTY Flagellum-specific ATP synthase
gi|154029|gb|AAA27101.1| flagellar protein [Salmonella typhimurium]
gi|16420507|gb|AAL20884.1| flagellum-specific ATP synthase [Salmonella typhimurium LT2]
gi|62128180|gb|AAX65883.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 456
Score = 357 bits (916), Expect = 9e-97, Method: Composition-based stats.
Identities = 204/443 (46%), Positives = 282/443 (63%), Gaps = 15/443 (3%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAEVVG 62
D + ++ ++ GR+ R ++E+ G +G C I D P+ +++EVVG
Sbjct: 12 LDNFEAKMALLPAVRRYGRLTRATGLVLEATGLQLPLGATCIIERQDGPETKEVESEVVG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA---------SGEILSVPVGNILLGRVVDALCKSAD 113
NG + LM +V+G+ G V A SG+ L P+G LLGRV+D K D
Sbjct: 72 FNGQRLFLMPLEEVEGILPGARVYARNGHGDGLQSGKQL--PLGPALLGRVLDGGGKPLD 129
Query: 114 GKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKS 173
G P P + + ++ P + + R PI + TG+RAI++LL VGRGQR+G+FAG+G+GKS
Sbjct: 130 GLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKS 189
Query: 174 TLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGM+AR T ADV V+ LIGERGREV DFIE+ LGP+G SV+++A +D S L R++G
Sbjct: 190 VLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQG 249
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
A AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+
Sbjct: 250 AAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV 309
Query: 294 ERSGTS--EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVL 351
ER+G GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++
Sbjct: 310 ERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIE 369
Query: 352 KSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIY 411
SISR + + + LL + + D++++GAY KGS +D AI +P++
Sbjct: 370 ASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLE 429
Query: 412 DFLTQEVDDPAKLKDTLQKLSDI 434
FL Q + + A +D+LQ L I
Sbjct: 430 AFLQQGIFERADWEDSLQALDLI 452
>gi|59712456|ref|YP_205232.1| flagellum-specific ATP synthase [Vibrio fischeri ES114]
gi|59480557|gb|AAW86344.1| flagellum-specific ATP synthase [Vibrio fischeri ES114]
Length = 439
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 194/402 (48%), Positives = 270/402 (67%), Gaps = 4/402 (0%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
+G++VRV +E+ G A +G C + T + ++AEVVG +G + LM V GV
Sbjct: 23 SGKLVRVVGLTLEATGCRAPIGSSCLVETVNGE--IEAEVVGFSGENLFLMPSEQVSGVL 80
Query: 81 IGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIR 140
G V + +PVG LLGRVVD + DG E Y+ + P + ++RKPI
Sbjct: 81 PGAKVTPIADGSGIPVGMELLGRVVDGVGNPIDGLGELYTEHTASFTSEPINPLSRKPIS 140
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
+ + G++AI+ LL VG+GQRLG+FAG+G+GKS LGM+ R T A V V+ LIGERGREV
Sbjct: 141 EPLDVGLKAINGLLTVGKGQRLGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREV 200
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FIE LGPEG + SV+V+A +D SAL R++G TA IAEYFRDQG DV+LL DS+TR
Sbjct: 201 KEFIEEILGPEGRQRSVVVAAPADASALMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTR 260
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMN 318
FA AQREI L++GEPPAT+GY PSVF+ LP L+ER+ G +GSIT F+TVL EGDD+
Sbjct: 261 FAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLTEGDDLQ 320
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
+PI+DA R ILDGHIVL R +A+ G YPA++V KS+SR+ +++ SK +R +L
Sbjct: 321 DPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITDEEHMLMSKAVRQVLS 380
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+++D++++GAY+ G+ AID A PR+ ++L Q + +
Sbjct: 381 TCRKNQDLVSIGAYKPGTDPAIDQAFTLKPRLDEYLQQRMKE 422
>gi|83859268|ref|ZP_00952789.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
gi|83852715|gb|EAP90568.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
Length = 436
Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats.
Identities = 205/439 (46%), Positives = 276/439 (62%), Gaps = 8/439 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M L D+ +N + T F GRV V+ L+E+EGP ++ L D P EV
Sbjct: 1 MDSLIDRISNLETRT----FKGRVSAVNGLLVEAEGPAMAL-TLGARAHLDGPVKASFEV 55
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKP-EPY 119
VG G +M+Y D+ GV+ G + ++ LGRV+D+ C+ D P
Sbjct: 56 VGFRGETALMMAYDDLTGVRPGAIATLDPRGDAIRPHKAWLGRVMDSFCRPQDSLGFLPE 115
Query: 120 SAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMI 179
Y + PP A +R+ + +R+ G+RA++ + GQRLG+FAG+G+GKS LL M+
Sbjct: 116 GDVEYALKGRPPGAHSRQRLGERLDLGVRAMNVFTPMRLGQRLGVFAGSGVGKSVLLSML 175
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
AR + ADV VI LIGERGRE +F+E LGPEG SV+++ TSD ALAR R YT A
Sbjct: 176 ARGSEADVIVIGLIGERGREAREFVEDVLGPEGRARSVVITETSDAPALARRRACYTTMA 235
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS 299
AEYFRDQG +V+ L DS+TRFA+AQREIGLA GEPP TRGYTPSVF+ LP LLER+G
Sbjct: 236 TAEYFRDQGLNVLCLMDSITRFALAQREIGLAAGEPPTTRGYTPSVFAELPGLLERAGPG 295
Query: 300 EK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRL 357
+ G+ITG +TVLV+GDD NEPI+DAVRGILDGHIV+ R++AERG++PA++VLKSISR
Sbjct: 296 PQGTGTITGLFTVLVDGDDHNEPIADAVRGILDGHIVMSRSIAERGRFPAIDVLKSISRS 355
Query: 358 SNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQE 417
+ V P ++ R LL Y + E++I LGAY GS+ +D AI + FL Q
Sbjct: 356 APEVYAPEEAPLAREARKLLAAYADMEELIRLGAYSSGSNPEVDRAIAVNEPLEAFLGQG 415
Query: 418 VDDPAKLKDTLQKLSDITG 436
D+ + + ++ L+ I G
Sbjct: 416 KDETSSIGESFAHLAGILG 434
>gi|74055037|gb|AAZ95842.1| FliI [Aeromonas hydrophila]
Length = 443
Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats.
Identities = 197/412 (47%), Positives = 273/412 (66%), Gaps = 4/412 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G++ RV +E+ G A++G LC+I T D L+AEVVG +G + LM ++GV
Sbjct: 25 GKLTRVVGLTLEAIGCRAAIGALCRIDTQDGM--LEAEVVGFSGDRLFLMPSEQLKGVIP 82
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V+ E +PVG LLGRV+D + + DG S++ + ++R+PI Q
Sbjct: 83 GARVVPITEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINPLSRRPIHQ 142
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI+++L VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ LIGERGREV
Sbjct: 143 PMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVK 202
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EG SV+V+A +D S L R++G TA AIAEYFRDQG +V+LL DS+TR+
Sbjct: 203 EFIEDILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRY 262
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE--KGSITGFYTVLVEGDDMNE 319
A AQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +GSIT F+TVL EGDD+ +
Sbjct: 263 AQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQD 322
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ V+ P + ++ ++
Sbjct: 323 PIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPQHMELARTLKQFYSL 382
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
Y ++ D+I +GAY +GS ID AI P + FL Q + + + LQ L
Sbjct: 383 YQQNRDLITIGAYSQGSDPRIDRAIVQKPYLDQFLQQGMREVIHYDEGLQSL 434
>gi|85711039|ref|ZP_01042099.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
gi|85694952|gb|EAQ32890.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
Length = 445
Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats.
Identities = 192/421 (45%), Positives = 274/421 (65%), Gaps = 4/421 (0%)
Query: 17 PIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDV 76
P+ +G + RV + E+ G A +G C + + ++AEVVG G LM D
Sbjct: 20 PVLVSGYLTRVVGLMFEAVGVRAPIGATCAV--ESAHGDIEAEVVGFEGQTSYLMPMDDA 77
Query: 77 QGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTR 136
GV G V +P+G LLGRV+DA D K + + + P + + R
Sbjct: 78 HGVVPGAKVKPLTRTEQLPLGLELLGRVIDARGHPLDAKGPILTDNQNAYRSLPINPLNR 137
Query: 137 KPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGER 196
+P++ + G+ AI++ + VG+GQR+G+FAG+G+GKS LLGM+ + TNADV V+ LIGER
Sbjct: 138 RPVKVPLDVGVNAINACITVGQGQRMGLFAGSGVGKSVLLGMMTKGTNADVIVVGLIGER 197
Query: 197 GREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFD 256
GREV +FI+ LG EGL+ +V+V+A +DQS L R+RG TA+ +AEYFRDQG +V+LL D
Sbjct: 198 GREVKEFIDEILGEEGLEKAVVVAAPADQSPLLRLRGCETASKVAEYFRDQGMNVLLLMD 257
Query: 257 SVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT--SEKGSITGFYTVLVEG 314
S+TR+AMAQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +GSIT FYTVL EG
Sbjct: 258 SLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGGAQGSITAFYTVLTEG 317
Query: 315 DDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMR 374
DD+ +PI+D+ R ILDGHIVL+R LA+ G YPA+++ SISR+ +V + ++R
Sbjct: 318 DDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVMPQVVSDEHLQRATKVR 377
Query: 375 TLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
+ + D+I++GAY KGS A ID+AI P++ FLTQ +++ ++L KL +
Sbjct: 378 QWYSSFRRNRDLISIGAYSKGSDAKIDEAIAMQPQVEGFLTQRMNEVISYDESLMKLQQL 437
Query: 435 T 435
T
Sbjct: 438 T 438
>gi|117620954|ref|YP_855907.1| flagellar protein export ATPase FliI [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562361|gb|ABK39309.1| flagellar protein export ATPase FliI [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 443
Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats.
Identities = 197/412 (47%), Positives = 272/412 (66%), Gaps = 4/412 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G++ RV +E+ G A++G LC+I T D L+AEVVG +G + LM ++GV
Sbjct: 25 GKLTRVVGLTLEAIGCRAAIGALCRIDTQDG--SLEAEVVGFSGDRLFLMPSEQLKGVIP 82
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V+ E +PVG LLGRV+D + + DG S++ + ++R+PI Q
Sbjct: 83 GARVVPITEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINPLSRRPIHQ 142
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAI+++L VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ LIGERGREV
Sbjct: 143 PMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVK 202
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EG SV+V+A +D S L R++G TA AIAEYFRDQG +V+LL DS+TR+
Sbjct: 203 EFIEEILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRY 262
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE--KGSITGFYTVLVEGDDMNE 319
A AQREI LA+GEPPAT+GY PSVF+ LP L+ER+G +GSIT F+TVL EGDD+ +
Sbjct: 263 AQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQD 322
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R LA+ G YPA+++ KSISR+ V+ P + ++ ++
Sbjct: 323 PIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMELARTLKQFYSL 382
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
Y ++ D+I +GAY +GS ID AI P + FL Q + + LQ L
Sbjct: 383 YQQNRDLITIGAYSQGSDPRIDRAIIQKPYLDQFLQQGMREVIHYDAGLQAL 434
>gi|56413115|ref|YP_150190.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|56127372|gb|AAV76878.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 456
Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats.
Identities = 203/443 (45%), Positives = 281/443 (63%), Gaps = 15/443 (3%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAEVVG 62
D + ++ ++ GR+ R ++E+ G +G C I D P+ +++EVVG
Sbjct: 12 LDNFEAKMALLPAVRRYGRLTRATGLVLEATGLQLPLGATCIIERQDGPETKEVESEVVG 71
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA---------SGEILSVPVGNILLGRVVDALCKSAD 113
NG + LM +V+G+ G V A SG+ L P+G LLGRV+D K D
Sbjct: 72 FNGQRLFLMPLEEVEGILPGARVYARNGHGDGLQSGKQL--PLGPALLGRVLDGGGKPLD 129
Query: 114 GKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKS 173
G P P + + ++ P + + R PI + TG+RAI++LL VGRGQR+G+FAG+G+GKS
Sbjct: 130 GLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKS 189
Query: 174 TLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRG 233
LLGM+AR T ADV V+ LIGERGREV DFIE+ LGP+G SV+++A +D S L R++G
Sbjct: 190 VLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQG 249
Query: 234 AYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLL 293
A AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+
Sbjct: 250 AAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV 309
Query: 294 ERSGTS--EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVL 351
ER+G GSIT FYTVL EGDD +PI+D+ R ILDGHI L R LAE G YPA+++
Sbjct: 310 ERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIALSRRLAEAGHYPAIDIE 369
Query: 352 KSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIY 411
SISR + + + LL + + D++++GAY KGS +D AI +P++
Sbjct: 370 ASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLE 429
Query: 412 DFLTQEVDDPAKLKDTLQKLSDI 434
FL Q + + A +D+LQ L I
Sbjct: 430 AFLQQGIFERADWEDSLQALDLI 452
>gi|84388114|ref|ZP_00991010.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
gi|84377181|gb|EAP94051.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
Length = 439
Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats.
Identities = 194/418 (46%), Positives = 275/418 (65%), Gaps = 4/418 (0%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
+G++VRV +E+ G A +G LC + T ++AEVVG +G + LM + G+
Sbjct: 23 SGKLVRVVGLTLEATGCKAPIGSLCLVETMSGQ--MEAEVVGFSGDNLFLMPSEQITGIL 80
Query: 81 IGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIR 140
G V +PVG LLGRV+D + DG Y+ +R A P + + RKPI
Sbjct: 81 PGARVTPVTTESGIPVGMELLGRVIDGVGNPLDGLGPIYTEQRASFNAEPINPLARKPIS 140
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
+ + G++AI+ LL VG+GQR+G+FAG+G+GKS LGM+ R TNA V V+ LIGERGREV
Sbjct: 141 EPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTNAQVVVVGLIGERGREV 200
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FIE LG +G K SV+V+A +D S L R++G TA A+AEYFRDQG DV+LL DS+TR
Sbjct: 201 KEFIEEILGEDGRKRSVVVAAPADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTR 260
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMN 318
FA AQREI L++GEPPAT+GY PSVF+ LP L+ER+ G E+GSIT F+TVL EGDD+
Sbjct: 261 FAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQ 320
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
+PI+DA R ILDGHIVL R +A+ G YPA++V KS+SR+ +++ SK +R +L
Sbjct: 321 DPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLS 380
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
+++D++++GAY+ G+ AID A PR+ ++L Q++ + + L + G
Sbjct: 381 ICRKNQDLVSIGAYKPGTDPAIDSAFTLKPRLDEYLQQKMKETVPYDMCVNMLKHVLG 438
>gi|91776327|ref|YP_546083.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
gi|91710314|gb|ABE50242.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
Length = 472
Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 23/443 (5%)
Query: 16 DPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTD 75
+ ++ +GR+ ++ ++E+ G +G C + + ++AEVVG +G + LM +
Sbjct: 26 ESLEVSGRITKLTGLVMEAVGIKLPIGSACYVPLAEGRR-VEAEVVGFDGGRMLLMPQSG 84
Query: 76 VQGVKIGDLVIA--------------------SGEILSVPVGNILLGRVVDALCKSADGK 115
V+GV G V A +PVG LLGRV+DA + D
Sbjct: 85 VEGVVPGAKVFALEVADALPKPNQAKHPRRRAIDRARHLPVGEALLGRVIDAAGRPLDEL 144
Query: 116 PEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTL 175
S P+ P + ++R PI + + G+RAI+S+L VGRGQR+G+FAG+G+GKS L
Sbjct: 145 GPLNSEHSVPLNTRPLNPLSRAPIEEVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVL 204
Query: 176 LGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAY 235
LGM+AR T A+V V+ LIGERGREV +FIE LGPEGL +V+V+A +D AL R++GA
Sbjct: 205 LGMMARYTTAEVIVVGLIGERGREVKEFIEQILGPEGLARAVVVAAPADVPALMRLQGAS 264
Query: 236 TATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLER 295
ATAIAEYFR+QGKDV+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER
Sbjct: 265 YATAIAEYFRNQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 324
Query: 296 SGTSE--KGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKS 353
+G + +GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R+LAE G YPA+++ +S
Sbjct: 325 AGNGKPGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEQS 384
Query: 354 ISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDF 413
ISR + ++ P + +++++ L YT ++D+IN+GAY+ GS +D+AI + I F
Sbjct: 385 ISRAMHNITSPEHQKNARKLKQLNSRYTRNQDLINVGAYESGSDPVLDEAIMRHEAIEAF 444
Query: 414 LTQEVDDPAKLKDTLQKLSDITG 436
L Q++ + A D++ L+ + G
Sbjct: 445 LQQDIKESASWTDSVDALASLVG 467
>gi|157082470|gb|ABV12148.1| hypothetical protein CKO_01002 [Citrobacter koseri ATCC BAA-895]
Length = 456
Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats.
Identities = 201/444 (45%), Positives = 283/444 (63%), Gaps = 11/444 (2%)
Query: 2 VDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAE 59
++ D + +++ ++ GR+ R ++E+ G +G C I D + +++E
Sbjct: 9 LNTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQDGTETREVESE 68
Query: 60 VVGLNGTIVQLMSYTDVQGVKIGDLVIA---SGEILS----VPVGNILLGRVVDALCKSA 112
VVG NG + LM +V+G+ G V A +GE L +P+G LLGRV+D K
Sbjct: 69 VVGFNGQRLFLMPLEEVEGILPGARVYAKNIAGEGLQSGKQLPLGPALLGRVLDGGGKPL 128
Query: 113 DGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGK 172
DG P P + + ++ P + + R PI + TG+R I++LL VGRGQR+G+FAG+G+GK
Sbjct: 129 DGLPAPDTTETGALITQPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGK 188
Query: 173 STLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIR 232
S LLGM+AR T ADV V+ LIGERGREV DFIE+ LG +G SV+++A +D S L R++
Sbjct: 189 SVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLLRMQ 248
Query: 233 GAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKL 292
GA AT IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L
Sbjct: 249 GAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPAL 308
Query: 293 LERSGTS--EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNV 350
+ER+G GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++
Sbjct: 309 VERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDI 368
Query: 351 LKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRI 410
SISR + + + LL + + D++++GAY KGS +D AI +P++
Sbjct: 369 EASISRAMTSLITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQL 428
Query: 411 YDFLTQEVDDPAKLKDTLQKLSDI 434
FL Q + + A +D+LQ L I
Sbjct: 429 EAFLQQGIFERADWEDSLQALELI 452
>gi|114777408|ref|ZP_01452405.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
gi|114552190|gb|EAU54692.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
Length = 471
Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats.
Identities = 192/416 (46%), Positives = 273/416 (65%), Gaps = 4/416 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G+V +V ++E+ G AS+G C I ++AE+VG G LM +G+
Sbjct: 29 GKVYKVLGPMLEATGLKASIGHACNICCSIG-HSIEAEIVGFRGEHTLLMPVGSTRGIAP 87
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
GD + S+ VG LLGRV+DA D +P+ + + TR I
Sbjct: 88 GDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMDEYALSNLGTLFPLHGTRLNPFTRHTIDA 147
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G+RAID+ + +G GQR+G+FAG G+GKSTLLGM+ARN++A+VNVIAL+GER REV
Sbjct: 148 PMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTLLGMLARNSDAEVNVIALVGERSREVR 207
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+F++ LG E L+HSV++ ATSD + R+R A+ AT IAE FR+QGK V+LL DS+TR
Sbjct: 208 EFLDQALGSEALQHSVVIVATSDMPPVLRVRAAHMATTIAEAFREQGKRVLLLMDSLTRV 267
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMN- 318
A AQREIGL +GEPPA++GYTPS FS L +LLERS GT++ G I+ FYTVLVEGDDM
Sbjct: 268 AQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGPGTAQGGDISAFYTVLVEGDDMRA 327
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
+PI+D+ +LDGHI+LDR LAE+G +PA+NVL+SISRL ++ A++ +R +
Sbjct: 328 DPIADSAMSVLDGHILLDRKLAEQGHFPAINVLRSISRLDTQLMNNEQMQAARMLRRKMS 387
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
+ EDMI++GAY++GS+ +D+ ID+ I FL Q + + +D+ Q+L ++
Sbjct: 388 IFERMEDMISIGAYEQGSNPELDNIIDNLQEIKGFLQQTSNSCSAREDSAQRLLEL 443
>gi|50120656|ref|YP_049823.1| flagellum-specific ATP synthase [Erwinia carotovora subsp.
atroseptica SCRI1043]
gi|49611182|emb|CAG74628.1| flagellum-specific ATP synthase [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 457
Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats.
Identities = 198/440 (45%), Positives = 278/440 (63%), Gaps = 10/440 (2%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNP--DGLKAEVVG 62
D + + +T ++ GR+ R ++E+ G +G C I + + +++EVVG
Sbjct: 13 LDSFEKRIDDTPSVRRYGRLTRATGLVLEATGLHMPLGATCLIERQNGSKVEEIESEVVG 72
Query: 63 LNGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKP 116
NG + LM +V+G+ G V A S + +P+G LLGRV+D K DG P
Sbjct: 73 FNGQKLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKPLDGLP 132
Query: 117 EPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLL 176
P + R P++ P + + R I + G+RAI++LL VGRGQR+G+FAG+G+GKS LL
Sbjct: 133 APDTGYRAPLITPPVNPLQRTAIDSVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLL 192
Query: 177 GMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYT 236
GM+AR T ADV V+ LIGERGREV DFIE+ LG EG SV+++A +D S L R++GA
Sbjct: 193 GMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLRMQGAAY 252
Query: 237 ATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS 296
AT IAE FRD+G V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 253 ATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312
Query: 297 GTS--EKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSI 354
G GS+T FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++ SI
Sbjct: 313 GNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAIDIEASI 372
Query: 355 SRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFL 414
SR + + + ++ + LL Y + D++++GAY GS +D AI YP + FL
Sbjct: 373 SRAMTALIDEDHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYPHLEAFL 432
Query: 415 TQEVDDPAKLKDTLQKLSDI 434
Q + + + +++ Q L I
Sbjct: 433 QQGMFEQSDYEESCQALHTI 452
>gi|122919955|pdb|2DPY|A Chain A, Crystal Structure Of The Flagellar Type Iii Atpase Flii
gi|122919956|pdb|2DPY|B Chain B, Crystal Structure Of The Flagellar Type Iii Atpase Flii
Length = 438
Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats.
Identities = 203/430 (47%), Positives = 278/430 (64%), Gaps = 15/430 (3%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDG--LKAEVVGLNGTIVQLMSYTD 75
++ GR+ R ++E+ G +G C I D P+ +++EVVG NG + LM +
Sbjct: 7 VRRYGRLTRATGLVLEATGLQLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPLEE 66
Query: 76 VQGVKIGDLVIA---------SGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPV 126
V+G+ G V A SG+ L P+G LLGRV+D K DG P P + + +
Sbjct: 67 VEGILPGARVYARNGHGDGLQSGKQL--PLGPALLGRVLDGGGKPLDGLPAPDTLETGAL 124
Query: 127 VASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNAD 186
+ P + + R PI + TG+RAI++LL VGRGQR+G+FAG+G+GKS LLGM+AR T AD
Sbjct: 125 ITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRAD 184
Query: 187 VNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRD 246
V V+ LIGERGREV DFIE+ LGP+G SV+++A +D S L R++GA AT IAE FRD
Sbjct: 185 VIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRD 244
Query: 247 QGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTS--EKGSI 304
+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+G GSI
Sbjct: 245 RGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGSI 304
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVL EGDD +PI+D+ R ILDGHIVL R LAE G YPA+++ SISR +
Sbjct: 305 TAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALITE 364
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ + LL + + D++++GAY KGS +D AI +P++ FL Q + + A
Sbjct: 365 QHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERADW 424
Query: 425 KDTLQKLSDI 434
+D+LQ L I
Sbjct: 425 EDSLQALDLI 434
>gi|30250026|ref|NP_842096.1| Flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
gi|30139133|emb|CAD85997.1| Flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
Length = 478
Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats.
Identities = 202/434 (46%), Positives = 275/434 (63%), Gaps = 23/434 (5%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
+G + RV ++E+ G +VG C I+ N + + AEVVG +G + LM D+ G+
Sbjct: 42 SGTLTRVAGLVMEAVGLKLAVGTSC-IVFLPNGNSVTAEVVGFSGERLFLMPSGDIYGLT 100
Query: 81 IGDLVIASGEILSVP--------------------VGNILLGRVVDALCKSADGKPEPYS 120
G V+ + +VP VG LLGRV++ D +
Sbjct: 101 PGAKVVPTEYTGAVPRIGTLQHPRRRAADRTKHISVGPELLGRVLNGSGDPLDRYGPLHC 160
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIA 180
P+ + P + + R PI + + G+RAI++LL+VGRGQR+G+FAG+G+GKS LLGM+A
Sbjct: 161 GHSVPLYSRPFNPLERAPIEKTLDVGVRAINTLLSVGRGQRMGLFAGSGVGKSVLLGMMA 220
Query: 181 RNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAI 240
R T+ADV V+ LIGERGREV +FIEH LGPEGL SV+V+A +D S L R+ GA ATAI
Sbjct: 221 RYTSADVIVVGLIGERGREVQEFIEHILGPEGLARSVVVAAPADTSPLMRLHGAAYATAI 280
Query: 241 AEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSE 300
AEYFRD+GK V+L+ DS+TR AMAQREI LAIGEPPAT+GY PSVF+ LP+L+ER+G
Sbjct: 281 AEYFRDEGKHVLLIMDSLTRVAMAQREISLAIGEPPATKGYPPSVFARLPQLVERAGNGR 340
Query: 301 K--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLS 358
+ GSIT FYTVL E DD N+PI+D R ILDGHIVL R LAE G YPA+++ SISR+
Sbjct: 341 RGSGSITAFYTVLTENDDPNDPIADNARAILDGHIVLSRRLAEAGHYPAIDIEASISRVM 400
Query: 359 NRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEV 418
+ ++R + L Y S D+I++GAY GS +D AI+ YP + FL Q +
Sbjct: 401 ASLVTREQLGQAQRFKALYSRYQRSHDLISVGAYASGSDPQLDRAIELYPVLESFLQQGM 460
Query: 419 DDPAKLKDTLQKLS 432
+ ++++KLS
Sbjct: 461 FEQESYIESMEKLS 474
>gi|74317621|ref|YP_315361.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
[Thiobacillus denitrificans ATCC 25259]
gi|74057116|gb|AAZ97556.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
[Thiobacillus denitrificans ATCC 25259]
Length = 468
Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats.
Identities = 201/448 (44%), Positives = 289/448 (64%), Gaps = 23/448 (5%)
Query: 9 TNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIV 68
T ++ +P++ +GR+ RV ++E+ G VG C + N L+AEVVG G +
Sbjct: 18 TELLAIAEPMRLSGRITRVAGLVMEAVGLKLPVGSACTVPLP-NGSHLEAEVVGFEGERL 76
Query: 69 QLMSYTDVQGVKIGDLVIA--------------------SGEILSVPVGNILLGRVVDAL 108
LM +DV+G+ G V S +PVG +LLGRV+D+
Sbjct: 77 FLMPQSDVEGIVPGARVFPVEVIPTLPGLGQVNHPRRRPSDRTRHLPVGEVLLGRVLDSN 136
Query: 109 CKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGT 168
+ DG +++ P+ + ++R PI + + G+RAI+S+L +GRGQR+G+FAG+
Sbjct: 137 GRPLDGLGSVHTSATAPLNNRAANPLSRAPISEILDVGVRAINSMLTIGRGQRMGLFAGS 196
Query: 169 GIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSAL 228
G+GKS LLGM+AR T+ADV V+ LIGERGREV +FIE LG EGL +V+V+A +D L
Sbjct: 197 GVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIEQILGEEGLARAVVVAAPADTPPL 256
Query: 229 ARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSS 288
R++GA ATAIAE+FRD+GK+V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+
Sbjct: 257 MRLQGAAYATAIAEHFRDEGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAK 316
Query: 289 LPKLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYP 346
LP L+ER+G + GSIT FYTVL EGDD +PI+D+ R ILDGHIVL R+LAE G YP
Sbjct: 317 LPALVERAGNGKPGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRDLAESGHYP 376
Query: 347 AVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDH 406
A+++ +SISR + ++ + ++R++ L Y S D+IN+GAY G+ +D+AI
Sbjct: 377 AIDIEQSISRAMHGITSAAHQQMARRLKKLYSRYARSRDLINVGAYAPGTDPLLDEAIRL 436
Query: 407 YPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
I FL Q + + A ++++L LS +
Sbjct: 437 QEGIEAFLQQNIPERAGVEESLAALSTL 464
>gi|114319873|ref|YP_741556.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichei
MLHE-1]
gi|114226267|gb|ABI56066.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichei
MLHE-1]
Length = 458
Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats.
Identities = 194/402 (48%), Positives = 268/402 (66%), Gaps = 3/402 (0%)
Query: 32 IESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEI 91
+E+EG A +G C + T + D ++AEVVG G + LM ++ G+ V+ G
Sbjct: 43 LEAEGCQAPLGSRCTLRTQQDRD-VEAEVVGFAGDKLYLMPTGELHGMMPNARVVPRGGT 101
Query: 92 LSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAID 151
+G LLGRV+D + DGK ++ +V + + R PI+ + G+RAI+
Sbjct: 102 AEAGMGPGLLGRVLDGGGRPLDGKGLLDHSEYRSLVGEGINPLARAPIKAPLDVGVRAIN 161
Query: 152 SLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPE 211
SL VGRGQR+G+FAG+G+GKS LLGM+ R TNADV V+ LIGERGREV +FI LG E
Sbjct: 162 SLFTVGRGQRMGLFAGSGVGKSVLLGMMTRYTNADVVVVGLIGERGREVKEFITDILGDE 221
Query: 212 GLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLA 271
GL SV+V++ +D+S L R+ GA AT+IAEYFRDQG +V+LL DS+TR+A AQREIGLA
Sbjct: 222 GLARSVVVASPADKSPLMRLHGAMLATSIAEYFRDQGLNVLLLMDSLTRYAQAQREIGLA 281
Query: 272 IGEPPATRGYTPSVFSSLPKLLERSGT--SEKGSITGFYTVLVEGDDMNEPISDAVRGIL 329
IGEPP T+GY PSVF+ LP+L+ER+G + GSIT FYTVL EGDD +PI+DA R IL
Sbjct: 282 IGEPPTTKGYPPSVFALLPRLVERAGNGPDDGGSITAFYTVLTEGDDQQDPIADAARAIL 341
Query: 330 DGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINL 389
DGH+VL R LA+ G YPA+++ S+SR ++ + ++R R L Y E++D+I++
Sbjct: 342 DGHLVLSRQLADAGHYPAIDIEASVSRAMINITERGHQRLAQRFRQLWSTYRENQDLISV 401
Query: 390 GAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
GAYQKGS +D+AI PR+ FL Q+V ++L++L
Sbjct: 402 GAYQKGSDPRVDEAIAIMPRLRAFLQQDVSTAVNFGESLEQL 443
>gi|149908454|ref|ZP_01897117.1| flagellum-specific ATP synthase [Moritella sp. PE36]
gi|149808617|gb|EDM68552.1| flagellum-specific ATP synthase [Moritella sp. PE36]
Length = 445
Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats.
Identities = 195/397 (49%), Positives = 268/397 (67%), Gaps = 4/397 (1%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKI 81
G++ RV +E+ G A++G LC + TD+ + AEVVG +G + LM V G+
Sbjct: 24 GKLTRVVGLTLEAVGCRAAIGSLCSVETDNGL--MDAEVVGFDGDKLFLMPSEQVIGIIP 81
Query: 82 GDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQ 141
G V E +PVG LLGRV+D + K DGK E + + A + + RK I +
Sbjct: 82 GAKVTPLNETQGIPVGMELLGRVLDGVGKPIDGKGEIITGQTTSFTAKRINPLARKKISK 141
Query: 142 RIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVL 201
+ G++AI+++L VG+GQR+G+FAG+G+GKS LLGM+ R + ADV V+ LIGERGREV
Sbjct: 142 PLDVGVKAINAMLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSTADVVVVGLIGERGREVK 201
Query: 202 DFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRF 261
+FIE LG EGL SV+V+A +D S L R++G T+ AIAEYFRDQG +V+LL DS+TRF
Sbjct: 202 EFIEEILGEEGLARSVVVAAPADSSPLMRLKGCETSLAIAEYFRDQGLNVLLLMDSLTRF 261
Query: 262 AMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMNE 319
A AQREI LA+GEPPAT+GY PSVF+ LP+L+ER+ G+ E+GSIT F+TVL EGDD+ +
Sbjct: 262 AQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAGNGSDEQGSITAFFTVLTEGDDLQD 321
Query: 320 PISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKD 379
PI+DA R ILDGHIVL R L + G YPA+++ KSISR+ V+ + A++ +
Sbjct: 322 PIADAARAILDGHIVLSRELTDAGHYPAIDIEKSISRVMPMVTTDFHQAAARGFKQAYSL 381
Query: 380 YTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQ 416
Y +++D++ +GAY KGS A ID AI P + FL Q
Sbjct: 382 YQQNKDLVAIGAYSKGSDAKIDRAIRLKPAMDQFLQQ 418
>gi|77975709|ref|ZP_00831243.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
[Yersinia frederiksenii ATCC 33641]
Length = 454
Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats.
Identities = 202/439 (46%), Positives = 280/439 (63%), Gaps = 10/439 (2%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGL 63
DK+ +S++ I+ GR+ R ++E+ G +G C I DN +++EVVG
Sbjct: 13 DKFEERISQSTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHDNGEVQEVESEVVGF 72
Query: 64 NGTIVQLMSYTDVQGVKIGDLVIA------SGEILSVPVGNILLGRVVDALCKSADGKPE 117
NG + LM +V+G+ G V A + +P+G LLGRV+D K DG P
Sbjct: 73 NGQRLFLMPLEEVEGIVPGARVYARVTTGGASASKQLPLGPELLGRVLDGSAKPLDGLPA 132
Query: 118 PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLG 177
P + R P++ P + + R I Q + G+R I++LL VGRGQR+G+FAG+G+GKS LLG
Sbjct: 133 PETGYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLG 192
Query: 178 MIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTA 237
M+AR T ADV V+ LIGERGREV DFIE+ LG EG SV+++A +D S L R++GA A
Sbjct: 193 MMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYA 252
Query: 238 TAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS- 296
T IAE FRD+G+ V+L+ DS+TR+AMAQREI LAIGEPPAT+GY PSVF+ LP L+ER+
Sbjct: 253 TRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 312
Query: 297 -GTSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSIS 355
G S GSIT FYTVL EGDD +PI+D+ R ILDGH+VL R LAE G YPA+++ SIS
Sbjct: 313 NGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASIS 372
Query: 356 RLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLT 415
R + N ++ + LL + + D++++GAY GS +D AI YP++ FL
Sbjct: 373 RAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQ 432
Query: 416 QEVDDPAKLKDTLQKLSDI 434
Q + + + +D Q L +
Sbjct: 433 QGMFERSSYEDACQHLKSL 451
>gi|126357144|ref|ZP_01714147.1| flagellar protein export ATPase FliI [Pseudomonas putida GB-1]
gi|126318191|gb|EAZ69046.1| flagellar protein export ATPase FliI [Pseudomonas putida GB-1]
Length = 451
Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats.
Identities = 197/417 (47%), Positives = 275/417 (65%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNGTIVQLMSYTDVQGV 79
GR++R+ +E+EG A+VG C +I DD+ P ++AEV+G +G V LM + G+
Sbjct: 29 GRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPVQVEAEVMGFSGPKVFLMPVGSIVGI 88
Query: 80 KIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPI 139
G V+ + +P+G +LGRV+D ++ DGK + P+ + + R PI
Sbjct: 89 APGARVVPLDDGGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPVINPLNRDPI 148
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
+ + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A++ V+ LIGERGRE
Sbjct: 149 SKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAEIIVVGLIGERGRE 208
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
V +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFRD+GK+V+LL DS+T
Sbjct: 209 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 268
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDM 317
RFA AQREI LAIGEPPATRGY PSVF+ LPKL+ER+G E GSIT FYTVL EGDD
Sbjct: 269 RFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGGSITAFYTVLSEGDDQ 328
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
+PI+D+ RG+LDGH VL R LAE G YPA+++ SISR+ +V + +++ + L
Sbjct: 329 QDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVDADHLRQAQKFKQLW 388
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++S D+I++GAY G D AI ++ +FL Q + + + + ++L I
Sbjct: 389 SRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQGLRENVGMAQSREQLGAI 445
>gi|152997448|ref|YP_001342283.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
gi|150838372|gb|ABR72348.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
Length = 443
Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats.
Identities = 195/429 (45%), Positives = 278/429 (64%), Gaps = 3/429 (0%)
Query: 5 FDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLN 64
+K + S + P + G+V R+ +E+ G V ++G+ C + + +++EVVG
Sbjct: 8 LNKLNHVSSVSLPPQIEGKVTRMVGLTMEAVGCVVALGDRCSVQVRKD-RWVESEVVGFT 66
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
G + LM ++G+ G V +PVG+ LLGRVV+ L K DGK +
Sbjct: 67 GDLTYLMPTEAIEGISPGARVRPLLGDSKMPVGDELLGRVVNGLGKPLDGKGPIKTKDSV 126
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
+ + + + RKPI + + GI+AI+SLL VG+GQRLG+FAG+G+GKS LLGM+ + T
Sbjct: 127 TLHGNVINPLQRKPISEPLDVGIKAINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTKFTE 186
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
AD+ V+ LIGERGREV +FI+ LG EGL SV+V++ +D SAL R+R A AT IAEY+
Sbjct: 187 ADITVVGLIGERGREVKEFIDQILGEEGLSRSVVVASPADDSALMRLRAAMLATRIAEYY 246
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGT--SEKG 302
RDQGK+V+LL DS+TR+A AQREI L++GEPPAT+GY PSVFS LP+L+ER+G G
Sbjct: 247 RDQGKNVLLLMDSLTRYAQAQREIALSVGEPPATKGYPPSVFSKLPQLVERAGNGCEGSG 306
Query: 303 SITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVS 362
S+T FYTVL EGDD +PI+DA R ILDGHIVL R LAE G YPA+++ SISR +
Sbjct: 307 SVTAFYTVLTEGDDQQDPIADASRAILDGHIVLSRRLAEEGHYPAIDIEASISRAMPHIV 366
Query: 363 GPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPA 422
+ + R++ L + +++D+I++GAY +GS +D AI P I +FL Q + +
Sbjct: 367 SEDHLYGAMRVKQLYSKFQQNQDLISVGAYARGSDPDLDQAIIQMPEIRNFLQQSLTESF 426
Query: 423 KLKDTLQKL 431
+ +LQ L
Sbjct: 427 TIDQSLQAL 435
>gi|26991055|ref|NP_746480.1| flagellum-specific ATP synthase [Pseudomonas putida KT2440]
gi|24986088|gb|AAN69944.1|AE016633_2 flagellum-specific ATP synthase FliI [Pseudomonas putida KT2440]
Length = 457
Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats.
Identities = 197/417 (47%), Positives = 274/417 (65%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNGTIVQLMSYTDVQGV 79
GR++R+ +E+EG A+VG C +I DD+ P ++AEV+G G V LM + G+
Sbjct: 35 GRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPVQVEAEVMGFAGPKVFLMPVGSIVGI 94
Query: 80 KIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPI 139
G V+ + +P+G +LGRV+D ++ DGK + P+ + + R PI
Sbjct: 95 APGARVVPLDDGGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPVINPLNRDPI 154
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
+ + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A++ V+ LIGERGRE
Sbjct: 155 SKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAEIIVVGLIGERGRE 214
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
V +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFRD+GK+V+LL DS+T
Sbjct: 215 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 274
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDM 317
RFA AQREI LAIGEPPATRGY PSVF+ LPKL+ER+G E GSIT FYTVL EGDD
Sbjct: 275 RFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGGSITAFYTVLSEGDDQ 334
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
+PI+D+ RG+LDGH VL R LAE G YPA+++ SISR+ +V + +++ + L
Sbjct: 335 QDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVDADHLRQAQKFKQLW 394
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++S D+I++GAY G D AI ++ +FL Q + + + + ++L I
Sbjct: 395 SRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQGLRENVGMAQSREQLGAI 451
>gi|21231371|ref|NP_637288.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768576|ref|YP_243338.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21113034|gb|AAM41212.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573908|gb|AAY49318.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 458
Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats.
Identities = 194/402 (48%), Positives = 269/402 (66%), Gaps = 4/402 (0%)
Query: 32 IESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEI 91
+E+ G A +G C++ D + AEVVG +G LM ++ G+ V+ S
Sbjct: 51 LEATGCEAPMGATCKVEVDGG--WVDAEVVGFSGERTYLMPSAELHGLLPNARVVPSRRR 108
Query: 92 LSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAID 151
V VG LLGRV+D+ DGK + + + + R+PI + G+RAI+
Sbjct: 109 GGVEVGEGLLGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINPLAREPITTSLDVGVRAIN 168
Query: 152 SLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPE 211
++L +GRGQR+G+FAG+G+GKSTLLGM+ R T+ADV V+ LIGERGREV DF+E LG E
Sbjct: 169 AMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEE 228
Query: 212 GLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLA 271
GL+ +V+V+A +D+ LAR+ GAY ATAIAE+FRDQG +V+LL DS+TRFA AQREIGL+
Sbjct: 229 GLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLS 288
Query: 272 IGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGIL 329
+GEPP TRGY PSVF+ LP L+ER+G K GSIT FYTVL EGDD +PI+DA R IL
Sbjct: 289 VGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAIL 348
Query: 330 DGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINL 389
DGHI+L R +A+ G YPA+++ S+SR+ ++ + ++++ LL YT + D+I +
Sbjct: 349 DGHILLSRRVADSGLYPAIDLESSVSRVVQDIANDTWRLRIRKLKRLLSAYTANRDLIAI 408
Query: 390 GAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKL 431
GAYQ+GS A D+A+ +P I DFL Q+V + L D+L L
Sbjct: 409 GAYQRGSDPATDEALARWPEIVDFLGQDVHKASDLTDSLSAL 450
>gi|119034703|gb|ABL59998.1| SctN [Lysobacter enzymogenes]
Length = 450
Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats.
Identities = 205/432 (47%), Positives = 279/432 (64%), Gaps = 1/432 (0%)
Query: 6 DKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITD-DNPDGLKAEVVGLN 64
D A++ + G+V + +I + G A +GELC++ + D L AEVVG++
Sbjct: 19 DPLIAALARVPSVVRVGKVAEAYGTMIRATGLKAMIGELCELRSPRDRSFRLAAEVVGVS 78
Query: 65 GTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRY 124
L + GV VIA+G SV G LLGR++DA + DG+ +
Sbjct: 79 RQYTLLTPLGALDGVAHDTEVIATGRQASVRCGEGLLGRILDANGDAIDGRGGFGPTVQM 138
Query: 125 PVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTN 184
P+ A+ P+ + R+ I + TG+RA+D+++ G GQRLGIFA G GKSTLLGM+AR +
Sbjct: 139 PIYAASPNPLARQLIDRPFATGVRALDTVITAGVGQRLGIFAVAGGGKSTLLGMLARGGD 198
Query: 185 ADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYF 244
ADVNVIAL+GERGREV +FI +LG EGLK S+IV ATSD+ AL R R A+ ATAIAEYF
Sbjct: 199 ADVNVIALVGERGREVNEFIHDNLGEEGLKKSIIVVATSDRPALERSRAAWVATAIAEYF 258
Query: 245 RDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSI 304
RD+GK VMLL DSVTRFA A R++GLAIGEPPA RG+ PSVFS +P+L ER+G ++KGSI
Sbjct: 259 RDRGKRVMLLVDSVTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAGNNDKGSI 318
Query: 305 TGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGP 364
T FYTVL+EG+D ++P+++ VR ILDGHIVL R LA YPA++VL S+SR RV+
Sbjct: 319 TAFYTVLMEGEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVLVSLSRTMPRVADE 378
Query: 365 NTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKL 424
+ A+ ++R L + + E ++ LG Y++GS A D AI+ I L Q +D A
Sbjct: 379 AHQRAAGQLRKYLAKHQDIELLLQLGEYKRGSDADADIAIEKIEPIRKLLKQSSNDLADY 438
Query: 425 KDTLQKLSDITG 436
K ++ L + G
Sbjct: 439 KQSIDALRRLFG 450
>gi|100235049|ref|ZP_01335855.1| hypothetical protein Bpse4_03001686 [Burkholderia pseudomallei
406e]
Length = 442
Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats.
Identities = 205/418 (49%), Positives = 276/418 (66%), Gaps = 2/418 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
+ TG+V+ V L+ G A++GELC++ AEVVG + L + +
Sbjct: 24 VGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQHAEVVGFTRNVALLSPFGTLG 83
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE-PYSAKRYPVVASPPDAMTR 136
+ G VI LSV VGN +LGRV+D+ + DG+ E Y A R PV+A+PP+ M+R
Sbjct: 84 EINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGELDYDALR-PVLAAPPNPMSR 142
Query: 137 KPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGER 196
+ + + TG+R +D L+ +G GQR+GIFA G+GKSTLLGM AR + DVNVIALIGER
Sbjct: 143 RMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLGMFARGASCDVNVIALIGER 202
Query: 197 GREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFD 256
GREV +F+E +G +G+ SV+V ATSD+S++ R + AY ATAIAEYFRDQGK V+L+ D
Sbjct: 203 GREVREFVELIMGEDGMARSVVVCATSDRSSIERTKAAYAATAIAEYFRDQGKRVLLMMD 262
Query: 257 SVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDD 316
S+TRFA A REIGLA GEPPA RG+ PSVF+ LP+LLER+G E GSIT YTVL E D
Sbjct: 263 SLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGEHGSITALYTVLAEDDS 322
Query: 317 MNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTL 376
++PI++ VRGILDGHI+L R +A R QYPA++VL S+SR+ +V+ A+ R+R L
Sbjct: 323 GSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLSRIMPQVATREHVGAAGRLRQL 382
Query: 377 LKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
L + E E ++ LG YQ GS A D+A+ RI FL Q D+ + TL L ++
Sbjct: 383 LAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLNQRTDEYSPPDATLAALHEL 440
>gi|1146265|gb|AAB04681.1| flagellar export protein
Length = 436
Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats.
Identities = 190/437 (43%), Positives = 280/437 (64%), Gaps = 6/437 (1%)
Query: 1 MVDLFDKYTNAVSETDPIKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEV 60
M + F+ Y V + + + F GRV ++ L+ES GP ++G+LC +I N + AEV
Sbjct: 1 MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLC-LIDQRNGKKVCAEV 59
Query: 61 VGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYS 120
+G NG V LM+Y G+++G+ V + + L + + + LLGRV+D+L + D K ++
Sbjct: 60 LGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFFN 119
Query: 121 AKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTL-LGMI 179
++ + + R +I+TG++ +D L V + + +F G+G S L LGMI
Sbjct: 120 NSYKELIFQKINPINRSIFEDQILTGVKVLDGFLPVAKRTKELVFFWFGVGNSYLCLGMI 179
Query: 180 ARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATA 239
A+N+NADVNVIA IGERGRE+ +FIEH+LG E LK SV+V +TSD+S ++R +GAY AT
Sbjct: 180 AKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATM 239
Query: 240 IAEYFRDQGKDVMLLFDSVTRFAMAQ-REIGLAIGEPPATRGYTPSVFSSLPKLLERSG- 297
IAEYFR+QGKDV L FDS+T FA A+ R++ G P A +GY PSVF +P LLERSG
Sbjct: 240 IAEYFREQGKDV-LCFDSITWFANAKKRDVSFFRGAPVA-KGYPPSVFVEIPILLERSGF 297
Query: 298 TSEKGSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRL 357
GS+TGFYTVLVEGDD EP+ D ++ +LDGHI+LDR+L +RG YP++NVL S SR
Sbjct: 298 NGNGGSVTGFYTVLVEGDDFTEPVDDNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRS 357
Query: 358 SNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQE 417
+R+ + + R LL Y + ED+I G Y KGS+ +D AI YP+I +F++Q
Sbjct: 358 IHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQG 417
Query: 418 VDDPAKLKDTLQKLSDI 434
+++ ++ ++ +I
Sbjct: 418 INETFDFENLEDEIKEI 434
>gi|89075516|ref|ZP_01161927.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
gi|89048788|gb|EAR54359.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
Length = 440
Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats.
Identities = 191/402 (47%), Positives = 267/402 (66%), Gaps = 4/402 (0%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
+GR+VRV +E+ G A VG LC++ T + L+AEVVG +G + LM + GV
Sbjct: 24 SGRLVRVVGLTLEAIGCRAPVGSLCKVETLNGE--LEAEVVGFSGETLFLMPSEQLLGVM 81
Query: 81 IGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIR 140
G V +PVG LLGRV+D + DG ++ R A+P + + RKPI+
Sbjct: 82 PGAKVTPILHNSGLPVGPELLGRVIDGVGNPLDGLGPIFTEHRASFNATPINPLARKPIK 141
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
+ + GI+AI+ L VG+GQR+G+FAG+G+GKS LGM+ R TNA + V+ LIGERGREV
Sbjct: 142 EPLDVGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTNAQIVVVGLIGERGREV 201
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FIE LGPEG SV+V+A +D S L R++G T+ IAEYFRDQG DV+LL DS+TR
Sbjct: 202 KEFIEESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTR 261
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMN 318
FA AQREI L++GEPPAT+GY PSVF+ LP L+ER+ G +GSIT F+TVL EGDD+
Sbjct: 262 FAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQ 321
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
+PI+DA R ILDGHIVL R +A+ G YPA++V +S+SR+ + SK +R +L
Sbjct: 322 DPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILS 381
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDD 420
+++D++++GAY+ G+ ID A P++ +L QE+ +
Sbjct: 382 ICRKNQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQEMKE 423
>gi|58582227|ref|YP_201243.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84624120|ref|YP_451492.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58426821|gb|AAW75858.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368060|dbj|BAE69218.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 458
Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats.
Identities = 194/405 (47%), Positives = 268/405 (66%), Gaps = 4/405 (0%)
Query: 32 IESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEI 91
+E+ G A +G C++ D L AEVVG G LM ++ G+ V+ S
Sbjct: 51 LEATGCEAPMGATCKVEVDGG--WLDAEVVGFAGERTYLMPSAELHGLLPNARVVPSRHR 108
Query: 92 LSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAID 151
V VG LLGRV+D+ DGK + + + + R+PI + G+RAI+
Sbjct: 109 GGVEVGEGLLGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINPLAREPITTSLDVGVRAIN 168
Query: 152 SLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPE 211
++L +GRGQR+G+FAG+G+GKSTLLGM+ R T ADV V+ LIGERGREV DF+E LG E
Sbjct: 169 AMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEE 228
Query: 212 GLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLA 271
GL+ +V+V+A +D+ LAR+ GAY ATAIAE+FRDQG +V+LL DS+TRFA AQREIGL+
Sbjct: 229 GLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLS 288
Query: 272 IGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGIL 329
+GEPP TRGY PSVF+ LP L+ER+G K GSIT FYTVL EGDD +PI+DA R IL
Sbjct: 289 VGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAIL 348
Query: 330 DGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINL 389
DGHI+L R +A+ G YPA+++ S+SR+ ++ + ++++ LL YT + D+I +
Sbjct: 349 DGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRKLKRLLSAYTANRDLIAI 408
Query: 390 GAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
GAYQ+GS A D+A+ +P I +FL Q+V + L D+L L +
Sbjct: 409 GAYQRGSDPATDEALARWPEIVEFLGQDVHKASVLSDSLSALQQL 453
>gi|86146133|ref|ZP_01064459.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
gi|85836080|gb|EAQ54212.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
Length = 439
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 193/418 (46%), Positives = 274/418 (65%), Gaps = 4/418 (0%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
+G++VRV +E+ G A +G LC + T ++AEVVG +G + LM + G+
Sbjct: 23 SGKLVRVVGLTLEATGCKAPIGSLCLVETMSGQ--MEAEVVGFSGDNLFLMPSEQITGIL 80
Query: 81 IGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIR 140
G V +PVG LLGRV+D + DG Y+ +R A P + + RKPI
Sbjct: 81 PGARVTPMTSESGIPVGMELLGRVIDGVGNPLDGLGPIYTEQRASFNAEPINPLARKPIS 140
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
+ + G++AI+ LL VG+GQR+G+FAG+G+GKS LGM+ R T A V V+ LIGERGREV
Sbjct: 141 EPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREV 200
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FIE LG +G K SV+V+A +D S L R++G TA A+AEYFRDQG DV+LL DS+TR
Sbjct: 201 KEFIEEILGEDGRKRSVVVAAPADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTR 260
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERS--GTSEKGSITGFYTVLVEGDDMN 318
FA AQREI L++GEPPAT+GY PSVF+ LP L+ER+ G E+GSIT F+TVL EGDD+
Sbjct: 261 FAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQ 320
Query: 319 EPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLK 378
+PI+DA R ILDGHIVL R +A+ G YPA++V KS+SR+ +++ SK +R +L
Sbjct: 321 DPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLS 380
Query: 379 DYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
+++D++++GAY+ G+ AID A PR+ ++L Q++ + + L + G
Sbjct: 381 ICRKNQDLVSIGAYKPGTDPAIDSAFTLKPRLDEYLQQKMKETVPYDMCVNMLKHVLG 438
>gi|126442369|ref|YP_001062985.1| type III secretion apparatus H+-transporting two-sector ATPase
[Burkholderia pseudomallei 668]
gi|126221860|gb|ABN85365.1| type III secretion apparatus H+-transporting two-sector ATPase
[Burkholderia pseudomallei 668]
Length = 443
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 199/416 (47%), Positives = 278/416 (66%)
Query: 21 TGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQGVK 80
TGRV+ V LI+ G ++GELC++ T + +AEVVG + L ++ ++ +
Sbjct: 26 TGRVLEVIGTLIKVSGLDVALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQLEQIS 85
Query: 81 IGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPIR 140
VI G LS+PVG+ LLGRV+D L + DG P S P++A+PP+ M+R+ I
Sbjct: 86 RTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQPLIAAPPEPMSRRMID 145
Query: 141 QRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGREV 200
+ TG+R +D+++A+G GQR+GIFA G+GKSTLLGM AR DVNVIALIGERGREV
Sbjct: 146 AAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIGERGREV 205
Query: 201 LDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVTR 260
+FIE LG G+ SV+V ATSD+S++ R + AY ATAIAEYFRD+G+ V+L+ DS+TR
Sbjct: 206 REFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLMMDSLTR 265
Query: 261 FAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDDMNEP 320
FA A REIGLA GEPPA RG+ PSVF+ LP+LLER+G GSIT YTVL E + ++P
Sbjct: 266 FARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGRTGSITALYTVLAEDESGSDP 325
Query: 321 ISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDY 380
+++ VRGILDGH++L R +A + QYPA++VL S+SR+ V A+ R+R LL +
Sbjct: 326 VAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAARVRELLAKH 385
Query: 381 TESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDITG 436
E E ++ +G Y+ G++ D+AI I F +Q DD A +DT+ +L ++G
Sbjct: 386 REVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAEDTIARLYALSG 441
>gi|148546740|ref|YP_001266842.1| flagellar protein export ATPase FliI [Pseudomonas putida F1]
gi|148510798|gb|ABQ77658.1| flagellar protein export ATPase FliI [Pseudomonas putida F1]
Length = 451
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 197/417 (47%), Positives = 274/417 (65%), Gaps = 4/417 (0%)
Query: 22 GRVVRVHDKLIESEGPVASVGELCQIITDDN--PDGLKAEVVGLNGTIVQLMSYTDVQGV 79
GR++R+ +E+EG A+VG C +I DD+ P ++AEV+G G V LM + G+
Sbjct: 29 GRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPVQVEAEVMGFAGPKVFLMPVGSIVGI 88
Query: 80 KIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAKRYPVVASPPDAMTRKPI 139
G V+ + +P+G +LGRV+D ++ DGK + P+ + + R PI
Sbjct: 89 APGARVVPLDDGGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPVINPLNRDPI 148
Query: 140 RQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGERGRE 199
+ + GIR+I+ LL VGRGQRLG+FAGTG+GKS LLGM+ R T A++ V+ LIGERGRE
Sbjct: 149 SKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAEIIVVGLIGERGRE 208
Query: 200 VLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFDSVT 259
V +FIEH LG EGLK SV+V++ +D + L R+R A T IAEYFRD+GK+V+LL DS+T
Sbjct: 209 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 268
Query: 260 RFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFYTVLVEGDDM 317
RFA AQREI LAIGEPPATRGY PSVF+ LPKL+ER+G E GSIT FYTVL EGDD
Sbjct: 269 RFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGGSITAFYTVLSEGDDQ 328
Query: 318 NEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLL 377
+PI+D+ RG+LDGH VL R LAE G YPA+++ SISR+ +V + +++ + L
Sbjct: 329 QDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVDADHLRQAQKFKQLW 388
Query: 378 KDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
++S D+I++GAY G D AI ++ +FL Q + + + + ++L I
Sbjct: 389 SRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQGLGENVGMAQSREQLGAI 445
>gi|83717873|ref|YP_438941.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
thailandensis E264]
gi|83651698|gb|ABC35762.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
thailandensis E264]
Length = 442
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 203/418 (48%), Positives = 277/418 (66%), Gaps = 2/418 (0%)
Query: 18 IKFTGRVVRVHDKLIESEGPVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLMSYTDVQ 77
+ TG+V+ V L+ G A++GELC++ + AEVVG + L + +
Sbjct: 24 VGMTGKVLEVIGTLVRVVGLEATLGELCELRSASGALIQHAEVVGFTRNVALLSPFGTLG 83
Query: 78 GVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPE-PYSAKRYPVVASPPDAMTR 136
+ G VI LSV VGN +LGRV+D+ + DG+ E Y A R PV+A PP+ M+R
Sbjct: 84 EINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGELDYDALR-PVIAPPPNPMSR 142
Query: 137 KPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVIALIGER 196
+ + + TG+R +D L+ +G GQR+GIFA G+GKSTLLGM AR + D+NVIALIGER
Sbjct: 143 RMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLGMFARGASCDINVIALIGER 202
Query: 197 GREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKDVMLLFD 256
GREV +F+E +G +G+ SV+V ATSD+S++ R + AY ATAIAEYFRDQGK V+L+ D
Sbjct: 203 GREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAATAIAEYFRDQGKRVLLMMD 262
Query: 257 SVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEKGSITGFYTVLVEGDD 316
S+TRFA A REIGLA GEPPA RG+ PSVF+ LP+LLER+G E+GSIT YTVL E D
Sbjct: 263 SLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGERGSITALYTVLAEDDS 322
Query: 317 MNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTL 376
++PI++ VRGILDGHI+L R +A R QYPA++VL S+SR+ +++ A+ R+R L
Sbjct: 323 GSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLSRIMPQIAAREHVGAAGRLRQL 382
Query: 377 LKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDI 434
L + E E ++ LG YQ GS A D+A+ RI FL Q D+ + TL L ++
Sbjct: 383 LAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLNQRTDEYSPPDATLAALHEL 440
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.316 0.136 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,715,971,204
Number of Sequences: 5470121
Number of extensions: 74180567
Number of successful extensions: 271608
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 7334
Number of HSP's successfully gapped in prelim test: 1314
Number of HSP's that attempted gapping in prelim test: 243237
Number of HSP's gapped (non-prelim): 9291
length of query: 474
length of database: 1,894,087,724
effective HSP length: 137
effective length of query: 337
effective length of database: 1,144,681,147
effective search space: 385757546539
effective search space used: 385757546539
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 132 (55.5 bits)