Kingdom |
Category |
Genus/Species |
Count |
|
  |
  |
12 |
Archaea |
  |
  |
3 |
  |
|
  |
12 |
  |
Euryarchaeota |
  |
3 |
  |
  |
Methanospirillum hungatei (mhu) |
1 |
  |
  |
Methanosarcina mazei (mma) |
1 |
  |
  |
Thermoplasma acidophilum (tac) |
1 |
Bacteria |
  |
  |
2060 |
  |
Acidobacteria |
  |
1 |
  |
  |
Solibacter usitatus (sus) |
1 |
  |
Actinobacteria |
  |
2 |
  |
  |
Bifidobacterium adolescentis (bad) |
1 |
  |
  |
Bifidobacterium longum DJO10A (blj) |
1 |
  |
Bacteroides |
  |
4 |
  |
  |
Bacteroides thetaiotaomicron (bth) |
1 |
  |
  |
Flavobacterium psychrophilum (fps) |
1 |
  |
  |
Parabacteroides distasonis (pdi) |
1 |
  |
  |
Porphyromonas gingivalis W83 (pgi) |
1 |
  |
Cyanobacteria |
  |
5 |
  |
  |
Anabaena sp. PCC7120 (ana) |
1 |
  |
  |
Anabaena variabilis (ava) |
1 |
  |
  |
Cyanothece sp. ATCC 51142 (cyt) |
2 |
  |
  |
Synechocystis sp. PCC6803 (syn) |
1 |
  |
Firmicutes |
  |
44 |
  |
  |
Alkaliphilus metalliredigens (amt) |
2 |
  |
  |
Bacillus clausii (bcl) |
2 |
  |
  |
Bacillus licheniformis DSM13 (bld) |
1 |
  |
  |
Bacillus subtilis (bsu) |
1 |
  |
  |
Bacillus weihenstephanensis (bwe) |
1 |
  |
  |
Clostridium acetobutylicum (cac) |
1 |
  |
  |
Clostridium botulinum B1 Okra (cbb) |
1 |
  |
  |
Clostridium botulinum E3 (cbt) |
1 |
  |
  |
Clostridium difficile (cdf) |
1 |
  |
  |
Clostridium phytofermentans (cpy) |
1 |
  |
  |
Clostridium tetani E88 (ctc) |
1 |
  |
  |
Enterococcus faecalis (efa) |
1 |
  |
  |
Geobacillus kaustophilus (gka) |
1 |
  |
  |
Geobacillus thermodenitrificans (gtn) |
2 |
  |
  |
Lactobacillus acidophilus (lac) |
1 |
  |
  |
Lactobacillus casei BL23 (lcb) |
1 |
  |
  |
Lactobacillus fermentum (lfe) |
1 |
  |
  |
Listeria innocua (lin) |
1 |
  |
  |
Lactococcus lactis subsp. lactis IL1403 (lla) |
2 |
  |
  |
Lactococcus lactis subsp. cremoris MG1363 (llm) |
1 |
  |
  |
Lactobacillus plantarum (lpl) |
1 |
  |
  |
Lysinibacillus sphaericus (lsp) |
1 |
  |
  |
Listeria welshimeri SLCC5334 (lwe) |
3 |
  |
  |
Oceanobacillus iheyensis (oih) |
3 |
  |
  |
Staphylococcus aureus RF122 (sab) |
1 |
  |
  |
Streptococcus agalactiae A909 (serotype Ia) (sak) |
2 |
  |
  |
Streptococcus agalactiae NEM316 (serotype III) (san) |
1 |
  |
  |
Staphylococcus epidermidis RP62A (ser) |
1 |
  |
  |
Streptococcus equi (sez) |
1 |
  |
  |
Streptococcus gordonii (sgo) |
1 |
  |
  |
Streptococcus sanguinis (ssa) |
1 |
  |
  |
Staphylococcus saprophyticus (ssp) |
1 |
  |
  |
Thermoanaerobacter sp. X514 (tex) |
1 |
  |
  |
Thermoanaerobacter pseudethanolicus (tpd) |
2 |
  |
Fusobacteria |
  |
2 |
  |
  |
Fusobacterium nucleatum (fnu) |
2 |
  |
Green nonsulfur bacteria |
  |
1 |
  |
  |
Chloroflexus aurantiacus (cau) |
1 |
  |
Green sulfur bacteria |
  |
1 |
  |
  |
Chlorobaculum parvum NCIB 8327 (cpc) |
1 |
  |
Proteobacteria |
  |
1997 |
  |
  |
Acinetobacter baumannii ACICU (abc) |
4 |
  |
  |
Acinetobacter baumannii SDF (abm) |
1 |
  |
  |
Acinetobacter baumannii AYE (aby) |
3 |
  |
  |
Acinetobacter sp. ADP1 (aci) |
1 |
  |
  |
Anaeromyxobacter dehalogenans (ade) |
1 |
  |
  |
Aeromonas hydrophila (aha) |
1 |
  |
  |
Acidovorax sp. JS42 (ajs) |
3 |
  |
  |
Alteromonas macleodii (amc) |
1 |
  |
  |
Actinobacillus pleuropneumoniae AP76 (serotype 7) (apa) |
101 |
  |
  |
Actinobacillus pleuropneumoniae JL03 (serotype 3) (apj) |
44 |
  |
  |
Actinobacillus pleuropneumoniae L20 (serotype 5b) (apl) |
25 |
  |
  |
Burkholderia ambifaria MC40-6 (bac) |
2 |
  |
  |
Burkholderia cepacia (bam) |
1 |
  |
  |
Bordetella avium (bav) |
1 |
  |
  |
Burkholderia cenocepacia MC0-3 (bcm) |
1 |
  |
  |
Burkholderia phymatum (bph) |
1 |
  |
  |
Burkholderia pseudomallei 1710b (bpm) |
1 |
  |
  |
Burkholderia phytofirmans (bpy) |
1 |
  |
  |
Campylobacter concisus 13826 (cco) |
1 |
  |
  |
Campylobacter curvus (ccv) |
3 |
  |
  |
Campylobacter fetus (cff) |
3 |
  |
  |
Campylobacter hominis ATCC BAA-381 (cha) |
1 |
  |
  |
Cellvibrio japonicus (cja) |
3 |
  |
  |
Citrobacter koseri ATCC BAA-895 (cko) |
1 |
  |
  |
Colwellia psychrerythraea (cps) |
1 |
  |
  |
Chromohalobacter salexigens (csa) |
1 |
  |
  |
Chromobacterium violaceum (cvi) |
1 |
  |
  |
Delftia acidovorans (dac) |
2 |
  |
  |
Dichelobacter nodosus (dno) |
1 |
  |
  |
Dinoroseobacter shibae (dsh) |
2 |
  |
  |
Desulfovibrio vulgaris DP4 (dvl) |
1 |
  |
  |
Azoarcus sp. EbN1 (eba) |
2 |
  |
  |
Erwinia carotovora (eca) |
6 |
  |
  |
Escherichia coli SECEC (ecm) |
2 |
  |
  |
Escherichia coli APEC O1 (ecv) |
6 |
  |
  |
Enterobacter sp. 638 (ent) |
2 |
  |
  |
Enterobacter sakazakii (esa) |
2 |
  |
  |
Erwinia tasmaniensis (eta) |
1 |
  |
  |
Geobacter bemidjiensis (gbm) |
1 |
  |
  |
Gluconacetobacter diazotrophicus (gdi) |
3 |
  |
  |
Geobacter lovleyi (glo) |
1 |
  |
  |
Gluconobacter oxydans (gox) |
1 |
  |
  |
Geobacter uraniumreducens (gur) |
1 |
  |
  |
Haemophilus ducreyi (hdu) |
8 |
  |
  |
Haemophilus influenzae Rd KW20 (serotype d) (hin) |
39 |
  |
  |
Haemophilus influenzae PittEE (hip) |
41 |
  |
  |
Haemophilus influenzae PittGG (hiq) |
47 |
  |
  |
Haemophilus influenzae 86-028NP (nontypeable) (hit) |
42 |
  |
  |
Haemophilus somnus 2336 (hsm) |
60 |
  |
  |
Haemophilus somnus 129PT (hso) |
35 |
  |
  |
Klebsiella pneumoniae (kpn) |
4 |
  |
  |
Leptothrix cholodnii (lch) |
1 |
  |
  |
Methylobacterium extorquens (mex) |
1 |
  |
  |
Marinomonas sp. MWYL1 (mmw) |
5 |
  |
  |
Mannheimia succiniciproducens (msu) |
1252 |
  |
  |
Nitrosomonas europaea (neu) |
1 |
  |
  |
Neisseria gonorrhoeae NCCP11945 (ngk) |
1 |
  |
  |
Neisseria meningitidis 053442 (serogroup C) (nmn) |
2 |
  |
  |
Pseudomonas aeruginosa PA7 (pap) |
2 |
  |
  |
Pseudoalteromonas atlantica (pat) |
1 |
  |
  |
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
3 |
  |
  |
Pseudomonas fluorescens Pf-5 (pfl) |
1 |
  |
  |
Pseudomonas fluorescens PfO-1 (pfo) |
1 |
  |
  |
Pseudoalteromonas haloplanktis (pha) |
1 |
  |
  |
Photorhabdus luminescens (plu) |
3 |
  |
  |
Proteus mirabilis (pmr) |
2 |
  |
  |
Pasteurella multocida (pmu) |
167 |
  |
  |
Ralstonia eutropha H16 (reh) |
1 |
  |
  |
Ralstonia eutropha JMP134 (reu) |
1 |
  |
  |
Rhizobium leguminosarum (rle) |
1 |
  |
  |
Rhodopseudomonas palustris TIE-1 (rpt) |
1 |
  |
  |
Rhodospirillum rubrum (rru) |
1 |
  |
  |
Shigella boydii CDC 3083-94 (sbc) |
1 |
  |
  |
Salmonella enterica subsp. enterica serovar Agona (sea) |
1 |
  |
  |
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 (sek) |
3 |
  |
  |
Salmonella enterica subsp. arizonae (ses) |
3 |
  |
  |
Sodalis glossinidius (sgl) |
1 |
  |
  |
Shewanella sp. ANA-3 (shn) |
2 |
  |
  |
Stenotrophomonas maltophilia (sml) |
1 |
  |
  |
Serratia proteamaculans (spe) |
2 |
  |
  |
Shewanella sediminis (sse) |
1 |
  |
  |
Salmonella typhimurium LT2 (stm) |
1 |
  |
  |
Vibrio fischeri (vfi) |
1 |
  |
  |
Vibrio vulnificus YJ016 (vvy) |
1 |
  |
  |
Yersinia enterocolitica (yen) |
7 |
  |
  |
Yersinia pseudotuberculosis PB1/+ (ypb) |
2 |
  |
  |
Yersinia pestis Angola (ypg) |
1 |
  |
  |
Yersinia pseudotuberculosis IP32953 (yps) |
2 |
  |
Spirochete |
  |
2 |
  |
  |
Treponema denticola (tde) |
2 |
  |
Tenericutes |
  |
1 |
  |
  |
Mycoplasma penetrans (mpe) |
1 |
Eukaryotes |
  |
  |
6 |
  |
Animals |
  |
1 |
  |
  |
Drosophila pseudoobscura (dpo) |
1 |
  |
Protists |
  |
5 |
  |
  |
Entamoeba histolytica (ehi) |
1 |
  |
  |
Monosiga brevicollis (mbr) |
1 |
  |
  |
Plasmodium falciparum 3D7 (pfa) |
1 |
  |
  |
Plasmodium falciparum Dd2 (pfd) |
1 |
  |
  |
Trichomonas vaginalis (tva) |
1 |
NULL |
  |
  |
0 |
TOTAL |
  |
  |
2081 |