This Appendix lists mutant genes of Arabidopsis for which recombination data have been obtained. This information was extracted from research publications and from responses to email surveys distributed to members of the Arabidopsis community. Additions and corrections should be reported to David Meinke, curator, at: meinke@osuunx.ucc.okstate.edu. Updated editions of this table can be viewed through the WWW at: http://mutant.lse.okstate.edu/meinke.html.
EXPLANATION OF COLUMNS:
Locus:
Name of gene identified by mutation, arranged in alphabetical order, and written in CAPS and without italics to avoid confusion between numbers and letters. Genes marked with an asterisk are known by more than one name. Synonyms for these genes are included in the table but are marked with (=) in the second (#) column.
#:
Chromosome where gene is located. When two different numbers are included, the mutant gene exhibits linkage to markers on different chromosomes. An equal sign (=) denotes synonyms as explained above.
Status:
This summarizes the current status of linkage data:
CM: Gene placed on classical map (Appendix 5).
AV: Location approximated with visible markers.
AM: Location approximated with molecular markers.
AVM: Location approximated with visible and molecular markers.
LO: Gene assigned to linkage group only.
U: Nature and extent of mapping data unresolved.
Map:
Estimated location (cM) of locus on classical genetic map (Appendix 5). Numbers marked with an asterisk refer to genes that were initially placed on the recombinant inbred map based on data with molecular markers. To compensate for map expansion of RI chromosomes, the estimated location of a given locus on the RI map was multiplied by the following constant: (total length of classical chromosome) / (total length of RI chromosome) in order to estimate the corresponding location on the classical map. These values for each chromosome were: chromosome 1 (0.722); chromosome 2 (0.838); chromosome 3 (0.678); chromosome 4 (0.624); chromosome 5 (0.609). Other genes were localized only to chromosomal regions: top; middle (mid); and bottom (bot).
Linked Marker:
Linked visible or molecular marker with recombination data available. In some cases, data with more than one marker are included.
% Rec
Recombination percentage between locus and linked marker. A = locus is above linked marker; B = locus is below linked marker.
Lab:
Reference laboratory that either provided linkage data or has worked extensively with the mutant. Names and email addresses for these reference laboratories are provided in Appendix 4.
Full Descriptive Name of Gene Symbol:
Self explanatory. Contact stock centers, databases, recent publications, or reference laboratories for additional information
Locus # Status Map Linked %Rec Lab Full Descriptive Name of Gene Symbol Marker ABA1 5 CM 98 MIN 7 1 ABA deficient ABA2 1 CM 70 CH1 12B 1 ABA deficient ABA3 1 CM 10 AN 10B 1 ABA deficient ABI1 4 CM 55 CER2 3 1 ABA insensitive ABI2 5 AVM - TZ - 3 ABA insensitive ABI3 3 CM 38 GL1 10 1 ABA insensitive ABI4 2 CM 62 - - 3 ABA insensitive ABI5 2 CM 49 - - 3 ABA insensitive ACA1 5 U - - - 4 Azetidine-2-carboxylic acid resistant ACD1 3 CM 68 GL1 21 5 Accelerated cell death ACD2 4 CM 68 AP2/CP3 <1/4 "5,86" Accelerated cell death ACL1 4 CM 55 - - 7 Acaulis (short floral stems) ACL2 1 CM 83* MI209/ MI303 0/0 7 Acaulis (short floral stems) ACL3 3 AV - GL1 10 7 Acaulis (short floral stems) ACL5 5 AM - ASA1 5B 7 Acaulis (short floral stems) ACT1 1 CM 35 AN 30 6 Cp glycerol-3-phosphate acyltrans. def. ADD1 5 CM 23* G4560 1 26 Arrested development ADH1 1 CM 114 CLV1 6 8 Alcohol dehydrogenase deficient AG 4 CM 42 CH42 3 1 Agamous AGR 5 AM - LFY3 4 60 Agravitropic AIM 4 U BOT - - 27 Abnormal inflorescence meristem AIN1 1 CM 70 - - 67 Ethylene insensitive ALB1 1 CM 12 DIS1 10 1 Albina ALB2 5 CM 15 CO 1 1 Albina ALB3 2 U - - - "9,10" Albina ALB4 4 CM 40 - - - Albina ALF1 = HLS3 - - - 14 Aberrant lateral root formation ALF3 5 CM 68* DFR/ NGA129 9/7 "14,83" Aberrant lateral root formation ALF4 5 CM 15* NGA151/ 249 1/1 "14,83" Aberrant lateral root formation ALF5 3 U MID - - 14 Aberrant lateral root formation ALR1 1 AM - NGA280 33 72 Aluminum resistant ALS1 5 CM 62* NGA129 17A 72 Aluminum sensitive ALS4 5 AM - NGA151 6 72 Aluminum sensitive AMP1* 3 U - AP3-TT5 - "10,66" Altered meristem program AMT1 5 CM 11 ASA-1 <1 11 a-methyl tryptophan resistant AN 1 CM 0 SUS1 <1 "1,2" Angustifolia (narrow leaf) ANL1 5 CM 15 ALB2 0A 1 Anthocyaninless ANT 4 AM - DHS1/AG 0/19 55 Aintegumenta (integument defect) AP1 1 CM 99 CER6 2 1 Apetala AP2* 4 CM 68 FD 1 1 Apetala AP3 3 CM 81 TT5 0 1 Apetala ARA1 4 CM 37 FCA <1 12 Arabinose sensitive ARC6 5 U BOT - - 62 "Accumulation, replication chloroplast" AS1 2 CM 60 EMB18 <1 "1,2" Asymmetric leaves AS2 1 CM 85 - - 13 Asymmetric leaves ATR 5 U - - - 14 Altered tryptophan regulation ATS 5 CM 64 EMB9 5B 1 Aberrant testa shape AUX1* 2 CM 62 - - 1 Auxin resistant AXR1* 1 CM 12 AXR3 1 15 Auxin resistant AXR2 3 CM 33 GL1 13 15 Auxin resistant AXR3 1 CM 11 AXR1 1 15 Auxin resistant AXR4 1 CM 62 - - - Auxin resistant BEL1 5 CM 50 - - - Bell-shaped ovules; female sterile BER 1 AM - RAP10- M253 - 57 Bicyclic ether resistant BIO1 5 CM 74 TZ 4 2 Biotin auxotroph BLU = HY4 - - - 71 Discontinued BOT1 1 CM 115* ADH 5B 59 Botero (short hypocotyl) BP1 4 CM 15 EMB132 3 "1,2" Brevipedicellus (downward siliques) BUM 1 CM 89 AP1 9A 26 Bumbershoot (shoot meristem) CAD1 5 CM 57 TT3 - 12 Cadmium sensitive CAD2 4 U - - - 12 Cadmium sensitive CAL 1 CM 46 - - - Cauliflower (defective inflorescence) CAR1 1 CM 87* NGA128 5B 72 CaMV resistant CBB2 4 CM 76* DHS1 3 41 Cabbage (extreme dwarf) CBB3 5 CM 13* NGA151/ 106 8/11 41 Cabbage (extreme dwarf) CER1 1 CM 1 AN 1 1 Eceriferum (altered surface wax) CER2 4 CM 52 EMB140 0 "1,2" Eceriferum (altered surface wax) CER3 5 CM 82 LFY 0 "1,16" Eceriferum (altered surface wax) CER4 4 CM 61 CP3 15 1 Eceriferum (altered surface wax) CER5 1 CM 70 CLV2 16 1 Eceriferum (altered surface wax) CER6* 1 CM 96 AP1 2 1 Eceriferum (altered surface wax) CER7 3 CM 88 FUS6 <1 "1,2" Eceriferum (altered surface wax) CER8 2 CM 72 EMB39 <1 "1,2" Eceriferum (altered surface wax) CER9 4 CM 76 AP2 9 1 Eceriferum (altered surface wax) CH1 1 CM 58 EMB22 4 "1,2" Chlorina (yellow green) CH5 5 CM 43 TT2 2 1 Chlorina (yellow green) CH6 3 CM 84 TT5 3 1 Chlorina (yellow green) CH12 4 U - - - 17 Chlorina (yellow green) CH13 4 U - - - 17 Chlorina (yellow green) CH17 3 U - - - 17 Chlorina (yellow green) CH42 4 CM 44 AG 3 1 Chlorina (yellow green) CHvi3 3 U - - - 17 Chlorina (yellow green) CHL1 1 CM 14 DIS1 3 1 Chlorate resistant CHL2 2 CM 32 ER 12 1 Chlorate resistant CHL3* 1 CM 56 CH1 6 1 Chlorate resistant CHL4 = RGN - - - 18 Discontinued CHL5 2 U - - - 18 Chlorate resistant CHL6 5 CM 22 - - 18 Chlorate resistant CHM 3 CM 32 GL1 15 1 Chloroplast mutator CHP7 5 CM 8 CO 6 1 Chlorophyll mutant CHS1 1 CM 33 AN 29 6 Chilling sensitive CKR1 = EIN2 - - - 72 Cytokinin resistant CLV1* 1 CM 110 EMB120 3 "1,2" Clavata (extra carpels) CLV2 1 CM 89 SUS3 2 "1,2" Clavata (extra carpels) CLV3 2 CM 43 ER 1 42 Clavata (extra carpels) CN 4 CM 31 - - 19 "Convoluta (leaf shape, twisted stem)" CO* 5 CM 13 ALB2 1 1 Late flowering COB 5 CM 80 LFY 1 43 Cobra (root defective) COG1 = RPP1 - - - 34 Altered recognition of Peronospora COP1* 2 CM 56 AS 3 "2,20" Constitutive photomorphogenic COP2 = AMP1 - - - 20 Constitutive photomorphogenic COP3 = HLS1 - - - 20 Constitutive photomorphogenic COP8 4 AM - GA1 14A 20 Constitutive photomorphogenic COP9* 4 CM 29 BP 10 "2,20" Constitutive photomorphogenic COP10 3 CM 13* NGA162 2A 20 Constitutive photomorphogenic COP11 = FUS6 - - - 20 Constitutive photomorphogenic COP12 = FUS12 - - - 20 Constitutive photomorphogenic COP13 = FUS11 - - - 20 Constitutive photomorphogenic COP14 = FUS4 - - - 20 Constitutive photomorphogenic COP15 = FUS5 - - - 20 Constitutive photomorphogenic CP1 4 CM 28 AG 13 1 Compacta (semi dwarf) CP2 2 CM 34 FVE 6 1 Compacta (semi dwarf) CP3 4 CM 73 AP2 5 "1,86" Compacta (semi dwarf) CPC 2 CM 73* M336 3B 58 Caprice (root hair defective) CRC 1 CM 100 AP1 1 21 Crabs claw (floral defective) CRM1 3 LO - GL1 35 7 Corymbose inflorescence CSI 4 CM 11 BP - 22 Cesium resistant CSR1 3 CM 70 TT5 9 1 Chlorsulfuron/imidazolinone resistant CTR1 5 CM 0 TT4 11A 23 Constitutive triple response CUD 4 CM 66* DHS1 16A 43 Cudgel (root defective) CUE1 5 CM 43* TTG/- 11B/- 24 CAB underexpressed CYR1 5 AM - DFR 13 44 Cytokinin resistant DDM1 5 U - - - 54 Decreased DNA methylation DEI1 3 AM - PURM 2 59 "Embryo, hypocotyl defective" DET1* 4 CM 20 BP 4 24 De-etiolated DET2 2 CM 60 ER/M429 -/2A 24 De-etiolated DET3 1 CM 12 CHL1 2 24 De-etiolated DGD1 3 CM 11* NGA162/ 172 6/18 85 Digalactosyl diacylglycerol deficient DIM1 = DWF1 - - - 73 Diminutia DIS1 1 CM 19 GN 2 "1,2" Distorted trichomes DIS2 1 CM 45 EMB88 2 "1,2" Distorted trichomes DOC1 3 CM 4 - - 24 Dark over-expression of CAB DOC2 5 CM 36 - - 24 Dark over-expression of CAB DOC3 1 CM 90 - - 24 Dark over-expression of CAB DRG 4 CM 56* PG11 3 55 Dragon (ovule defective) DW1 1 CM 23 GAI <1 1 Dwarf DWF1* 3 CM 26 - - 25 Dwarf E112 = PRC1 - - - 59 Discontinued ECO 1 AM - NGA280 10 26 "Ectopic outgrowth (meristem, leaf)" ECR = RPW - - - "64,79" Discontinued EIN1 = ETR - - - 23 Ethylene insensitive EIN2* 5 CM 1 - - 23 Ethylene insensitive EIR1 5 CM 70 TT3 12 23 Ethylene insensitive root ELF3 2 CM 43 ER 1 26 Early flowering ELG 4 CM 63 AP2 5A 1 Elongated hypocotyl EMB1 3 CM 5 HY2 7 2 Embryo defective EMB2 5 CM 27 TTG 1 2 Embryo defective EMB7 2 LO - ER 26 2 Embryo defective EMB9 5 CM 59 TT3 2 2 Embryo defective EMB10 1 CM 27 DIS1 8 2 Embryo defective EMB14 = SUS2-2 - - - 2 Discontinued EMB15 5 CM 85 YI <1 2 Embryo defective EMB16 5 CM 90 YI 4 2 Embryo defective EMB17 1 CM 111 GL2 7 2 Embryo defective EMB18 2 CM 61 AS 1 2 Embryo defective EMB19 1 LO - - - 2 Embryo defective EMB20 4 CM 56 CER2 2 2 Embryo defective EMB22 1 CM 62 CH1 4 2 Embryo defective EMB24 5 CM 1 LU 8 2 Embryo defective EMB25 1 CM 100 CLV1 6 2 Embryo defective EMB27 1 CM 66 CER5 4 2 Embryo defective EMB28* 4 CM 58 CER2 5 2 Embryo defective EMB29 3 CM 24 HY2 11 2 Embryo defective EMB30* 1 CM 21 DIS1 2 2 Embryo defective EMB31 2 LO - - - 2 Embryo defective EMB33 = SUS2-3 - - - 2 Discontinued EMB34* 2 CM 0 STI 4 2 Embryo defective EMB35 4 CM 58 CER2 4 2 Embryo defective EMB36 = EMB156 -2 - - - 2 Discontinued EMB38 2 CM 66 AS 6 2 Embryo defective EMB39 2 CM 73 CER8 0 2 Embryo defective EMB40 = FS1 - - - 2 Embryo defective EMB41 1 CM 92 CLV2 3 2 Embryo defective EMB42 4 CM 60 AP2 11 2 Embryo defective EMB43 1 CM 26 DIS2 16 2 Embryo defective EMB49 2 CM 63 AS 8 2 Embryo defective EMB51 3 CM 14 HY2 1 2 Embryo defective EMB52 3 CM 3 HY2 9 2 Embryo defective EMB53 2 CM 54 AS 9 2 Embryo defective EMB54 1 CM 110 CLV2 19 2 Embryo defective EMB55 = EMB34-2 - - - 2 Discontinued EMB56 4 CM 57 CER2 4 2 Embryo defective EMB57 2 CM 18 CP2 14 2 Embryo defective EMB58 2 CM 14 STI 9 2 Embryo defective EMB59 5 LO - - - 2 Embryo defective EMB60 = SUS1-3 - - - 2 Discontinued EMB62 2 CM 11 STI 7 2 Embryo defective EMB64 5 CM 71 TT3 13 2 Embryo defective EMB65 3 CM 60 GL1 14 2 Embryo defective EMB66 2 LO - - - 2 Embryo defective EMB67 5 CM 79 YI 5 2 Embryo defective EMB68 5 CM 9 TTG 18 2 Embryo defective EMB69 3 CM 73 TT5 8 2 Embryo defective EMB70 4 AV - CER2 5 2 Embryo defective EMB71 1 CM 84 CLV2 5 2 Embryo defective EMB76 = SUS1 - - - 2 Discontinued EMB77 4 CM 59 CER2 11 2 Embryo defective EMB78 = FUS6 - - - 2 Discontinued EMB79 1 LO - - - 2 Embryo defective EMB80 1 CM 76 CLV2 11 2 Embryo defective EMB81 4 CM 39 CER2 15 2 Embryo defective EMB83 1/4 LO - CH1/BP 5/11 2 Embryo defective EMB84 3/4 LO - GL1/ CER2 7/3 2 Embryo defective EMB86* 5 CM 23 TTG 5 2 Embryo defective EMB87 5 CM 85 YI <1 2 Embryo defective EMB88 1 CM 42 DIS2 2 2 Embryo defective EMB89 1 AV - DIS1 2 2 Embryo defective EMB90 3 CM 28 HY2 17 2 Embryo defective EMB91 2 AV - STI 11 2 Embryo defective EMB93 2 CM 7 STI 2 2 Embryo defective EMB94 2/5 LO - CP2/TTG 10/17 2 Embryo defective EMB95 3 CM 24 HY2 9 2 Embryo defective EMB101 2 CM 61 AS 2 2 Embryo defective EMB104 4 CM 63 AP2 6 2 Embryo defective EMB105 1 LO - - - 2 Embryo defective EMB106* 4 CM 55 CER2 2 2 Embryo defective EMB107 4 CM 62 AP2 5 2 Embryo defective EMB108 5 AV - TTG 2 2 Embryo defective EMB109 4 CM 39 CER2 14 2 Embryo defective EMB110 1 LO - - - 2 Embryo defective EMB111 2 CM 64 AS 3 2 Embryo defective EMB115 4 LO - - - 2 Embryo defective EMB116 = EMB256- 2 - - - 2 Discontinued EMB117 3 CM 84 CER7 3 2 Embryo defective EMB118 1 CM 69 CH1 9 2 Embryo defective EMB120 1 CM 113 CLV1 3 2 Embryo defective EMB122 1/3 LO - CLV2/ GL1 16/26 2 Embryo defective EMB123 1/2 LO - CLV2/ AS 8/2 2 Embryo defective EMB125 3 CM 35 GL1 10 2 Embryo defective EMB126 1 CM 49 DIS2 3 2 Embryo defective EMB127 1 CM 29 DIS1 10 2 Embryo defective EMB128 1 CM 76 CLV2 15 2 Embryo defective EMB129 3/5 LO - GL1/YI 3/2 2 Embryo defective EMB130 4 CM 46 CER2 7 2 Embryo defective EMB131 1 CM 29 DIS1 10 2 Embryo defective EMB132 4 CM 18 BP 3 2 Embryo defective EMB133 3 CM 85 CER7 3 2 Embryo defective EMB134 = FUS8 - - - 2 Discontinued EMB135 5 AV - TTG 18 2 Embryo defective EMB137 4 CM 34 CER2 23 2 Embryo defective EMB139 5 CM 51 TT3 6 2 Embryo defective EMB140 4 CM 52 CER2 0 2 Embryo defective EMB141 5 CM 56 TT3 1 2 Embryo defective EMB142 1 CM 12 DIS1 4 2 Embryo defective EMB143 = COP9 - - - 2 Discontinued EMB144 = FUS9 - - - 2 Discontinued EMB145 3 CM 0 HY2 12 2 Embryo defective EMB146 2 CM 16 STI 11 2 Embryo defective EMB148 4 CM 27 BP 12 2 Embryo defective EMB149 3 CM 75 TT5 5 2 Embryo defective EMB150 4 AV - BP 12 2 Embryo defective EMB151 3/5 LO - HY2/YI 1/6 2 Embryo defective EMB152 2 CM 47 ER 4 2 Embryo defective EMB153 3 CM 17 HY2 5 2 Embryo defective EMB154 3 CM 85 CER7 3 2 Embryo defective EMB155 = EMB106 -2 - - - 2 Discontinued EMB156* 1 CM 115 GL2 3 2 Embryo defective EMB158 = SUS3 - - - 2 Discontinued EMB160 4 CM 20 BP 4 2 Embryo defective EMB161* 5 CM 39 TTG 9 2 Embryo defective EMB163 5 CM 9 TT4 3 2 Embryo defective EMB166 5 CM 5 TTG 27 2 Embryo defective EMB167 3 CM 63 GL1 12 2 Embryo defective EMB168 = COP1 - - - 2 Discontinued EMB170* 5 CM 60 TT3 3 2 Embryo defective EMB171 4 CM 27 BP 9 2 Embryo defective EMB172 3 CM 74 TT5 4 2 Embryo defective EMB173 1 CM 6 AN 2 2 Embryo defective EMB175 5 CM 6 TTG 22 2 Embryo defective EMB176 1 CM 11 DIS1 7 2 Embryo defective EMB177 = SUS2-1 - - - 2 Discontinued EMB178 4 CM 22 BP 7 2 Embryo defective EMB179 1 CM 99 CLV1 12 2 Embryo defective EMB180 2/5 LO - ER/TT3 17/19 2 Embryo defective EMB181 4 CM 44 CER2 8 2 Embryo defective EMB201 3 CM 23 HY2 11 2 Embryo defective EMB208 3 LO - GL1 25 2 Embryo defective EMB209 5 CM 82 YI 5 2 Embryo defective EMB210 4 LO - - - 2 Embryo defective EMB212 = LEC1-1 - - - 2 Discontinued EMB213 5 CM 20 TTG 8 2 Embryo defective EMB214 = TWN1 - - - 2 Discontinued EMB215 5 CM 40 TTG 9 2 Embryo defective EMB218 4 AV - CER2 10 2 Embryo defective EMB222 5 CM 31 TTG 2 2 Embryo defective EMB224 3 CM 30 GL1 12 2 Embryo defective EMB225 2 CM 63 AS 5 2 Embryo defective EMB230 4 CM 41 CER2 9 2 Embryo defective EMB232 1 CM 27 DIS1 7 2 Embryo defective EMB233 1 CM 3 DIS1 16 2 Embryo defective EMB236 4 CM 33 BP 22 2 Embryo defective EMB237 1 AV - DIS1 - 2 Embryo defective EMB244 1 CM 71 CH1 13 2 Embryo defective EMB246 5 LO - TT3 24 2 Embryo defective EMB251 = EMB161 -2 - - - 2 Discontinued EMB256* 5 CM 6 TT4 6 2 Embryo defective EMB257 4 AV - CER2 5 2 Embryo defective EMB260 1 CM 31 DIS1 14 2 Embryo defective EMB262 5 CM 16 TT4 2 2 Embryo defective EMB263 = EMB86-2 - - - 2 Discontinued EMB266 5 AV - TTG 3 2 Embryo defective EMB270 1/4 LO - CH1/ CER2 12/14 2 Embryo defective EMB274 4 AV - CER2 15 2 Embryo defective EMB277 2 AV - ER 6 2 Embryo defective EMB286 3 CM 6 HY2 6 2 Embryo defective EMB287 1 AV - CH1 13 2 Embryo defective EMB293 3 AV - GL1 10 2 Embryo defective EMBRG1 = EMB28-2 - - - "2,74" Discontinued EMBRG2 1 CM 97 CLV2 8 "2,74" Embryo defective EMBRG3 1 CM 102 CLV1 6 "2,74" Embryo defective EMBRG4 3 LO - GL1 23 "2,74" Embryo defective EMBRG5 4 CM 50 CER2 2 "2,74" Embryo defective EMBRG6 = EMB170 -2 - - - "2,74" Discontinued EMBRG7 4 CM 9 BP 7 "2,74" Embryo defective EMF1 5 CM 12* G6830/ 6833 - 45 Embryonic flower EMF2 5 CM 69* M435/ G4028 8/12 45 Embryonic flower ER 2 CM 44 HY1 2 1 Erecta ESD4 4 U - - - 9 Early flowering in short days ETO1 5 CM 83 YI 2 23 Ethylene overproducer ETO2 5 U - - - 23 Ethylene overproducer ETR1* 1 CM 93 AP1 7 "23,27" Ethylene insensitive ETR2 3 U TOP - - 27 Ethylene insensitive FAD2 3 CM 20 G2488-9 2 6 Fatty acid desaturase deficient FAD3 2 CM 54 ASA2 <1 6 Fatty acid desaturase deficient FAD4* 4 CM 69 CER2 17 6 Fatty acid desaturase deficient FAD5* 3 CM 16 GL1 26 6 Fatty acid desaturase deficient FAD6* 4 CM 54 AP2 13 6 Fatty acid desaturase deficient FAD7* 3 CM 8 HY2 3 6 Fatty acid desaturase deficient FADA = FAD4 - - - 6 Discontinued FADB = FAD5 - - - 6 Discontinued FADC = FAD6 - - - 6 Discontinued FADD = FAD7 - - - 6 Discontinued FAS1 1 CM 88 GL2 29 28 Fasciated (like clavata) FAS2 5 CM 56 YI 33 28 Fasciated (like clavata) FB = GI - - - - Discontinued FCA 4 CM 32 TH3 5 1 Late flowering FD 4 CM 64 AP2 1 1 Late flowering FE 1 CM 122 AP1 22 1 Late flowering FG = CO - - - - Late flowering FHA 1 CM 12 GA4 11 1 Late flowering FHY2 = PHYA - - - - Discontinued FIL 2 CM 67* LTP 1 58 Filamentous flower FK 3 CM 77 TT5 4 29 Fackel (embryo defective) FL 1 LO - AN 41 19 Folliculiformis (like clavata) FLA = FRI - - - - Late flowering FLC 5 CM 8 - - - Altered flower time FLF 5 AV TOP - - 46 Late flowering FLO5 = CLV1 - - - 30 Discontinued FLO10 = SUP - - - 30 Floral defective FLO2>4 = AP2 - - - 30 Discontinued FLP 1 AM - NCC1/ PVV4 3/26 78 Four lips (clustered stomata) FPA 2 CM 83 CER8 17 1 Late flowering FRE1 = PHYA - - - - Discontinued FRI* 4 CM 0 - - "1,31" Frigida (late flowering) FS1* 5 CM 23 TTG 3 "2,29" "Fass (embryo, shoot defective)" FS2* 2 LO - - - 59 "Fass (embryo, shoot defective)" FT 1 CM 88 AP1 12 1 Late flowering FUR1 4 CM 22 BP 7B 84 FUdR resistant FUS1 = COP1 - - - 32 Fusca (anthocyanin in cotyledons) FUS2 = DET1 - - - 32 Fusca (anthocyanin in cotyledons) FUS3 3 CM 41 GL1 5 32 Fusca (anthocyanin in cotyledons) FUS4* 5 CM 62* DFR 0 20 Fusca (anthocyanin in cotyledons) FUS5* 1 CM 4* NGA59 4B 20 Fusca (anthocyanin in cotyledons) FUS6* 3 CM 87 CER7 1 2 Fusca (anthocyanin in cotyledons) FUS7 = COP9 - - - 32 Fusca (anthocyanin in cotyledons) FUS8* 5 CM 64 GL3 11 2 Fusca (anthocyanin in cotyledons) FUS9* 3 CM 16 HY2 4 2 Fusca (anthocyanin in cotyledons) FUS11* 5 CM 20* NGA151 2B 20 Fusca (anthocyanin in cotyledons) FUS12* 2 CM 46 ER/PY 2/5 "20,32" Fusca (anthocyanin in cotyledons) FVE 2 CM 28 PHYB 4 1 Late flowering FWA 4 CM 54 GA5 2 1 Late flowering FY 5 CM 12 TTG 20 1 Late flowering GA1 4 CM 5 BP 10 1 GA requiring GA2 1 CM 119 CLV1 9 1 GA requiring GA3 5 CM 33 TTG 4 1 GA requiring GA4 1 CM 22 GAI <1 1 GA requiring GA5 4 CM 53 CER2 1 1 GA requiring GAI 1 CM 22 GA4 <1 1 GA insensitive GF 2 LO - - - 33 Female gametophytic factor GI* 1 CM 33 GA4 11 1 Gigantea (late flowering) GK 1 U - - - 29 Gurke (embryo defective) GL1 3 CM 46 SUP 9 1 Glabra (reduced trichomes) GL2 1 CM 118 SUS2 2 "1,2" Glabra (reduced trichomes) GL3 5 CM 53 GA3 19 1 Glabra (reduced trichomes) GLD1 2 U - - - 6 Glycine decarboxylase deficient GLD2 5 U - - - 6 Glycine decarboxylase deficient GN = EMB30 - - - 29 Gnom (embryo defective) GR2 5 CM 71 GL3 17 19 Grisea (gray-green leaf color) GRL 2 CM 60 AS - 29 Gnarled (abnormal trichomes) GUN1 2 CM 42* GPA1 3 24 Genomes uncoupled HCF107 3 AM - NGA162 - 94 High chlorophyll fluorescent HCF109 5 CM 48* PHYC 0 94 High chlorophyll fluorescent HLS1* 4 AV - CER2 9 23 Hookless (ethylene response) HLS2 4 AV - CER2 13 23 Hookless (ethylene response) HLS3* 2 AM - M605 4A 23 Hookless (ethylene response) HPT = AMP1 - - - 29 Hauptling (extra cotyledons) HXC1 5 CM 9* ASA1 <1 "80,81" Hypersens. Xanth. camp. pv. camp. HY1 2 CM 44 ER 2 1 Elongated hypocotyl in light HY2 3 CM 12 FAD7 3 6 Elongated hypocotyl in light HY3 = PHYB - - - 1 Elongated hypocotyl in light HY4* 4 CM 10 FCA 18 1 Elongated hypocotyl in light HY5 5 CM 8 MS1 15 1 Elongated hypocotyl in light HY8 = PHYA - - - - Discontinued IAE1 2 CM 25* PR1/ MI398 0 31 Increased Ac excision IAR1 1 CM 105* NGA111 3A 47 IAA-alanine resistant IAR2 5 AM - NGA76 - 47 IAA-alanine resistant ICR1 3 AV - TT6-GL1 - 11 IAA conjugate resistant ILR1 3 CM 1* NGA172 1A 47 IAA-leucine resistant IM 4 CM 48 CER2 4 1 Immutans (variegated) INO 1 AM - NGA248/ 63 6/14 55 "Inner, no outer (ovule defective)" KE21 3 U TOP - - 63 Altered starch in leaves KE33 1 U TOP - - 63 Altered starch in leaves KE81 3 U BOT - - 63 Altered starch in leaves KEU 1 CM 14 DIS1 5 29 Keule (embryo defective) KIM 2 U - - - 58 Kimagure (root hair defective) KLK 5 LO - TTG - 29 Klunker (embryo defective) KN 1 AV - DIS1 10 29 Knolle (embryo defective) LAD 5 CM 12* - - 95 Late anther dehiscence LAN 2 CM 50 - - - Lanceolate (narrow leaves) LE* 1 CM 66 CH1 8 1 Lepida (dwarf) LEC1* 1 CM 29 DIS1 9 2 Leafy cotyledon LEC2 1 LO - - - 2 Leafy cotyledon LFY 5 CM 82 TZ 9 30 Leafy (floral defective) LIT 5 CM 72* DFR/LFY 19/20 43 Lions tail (root defective) LU 5 CM 10 TT4 2 1 Lutescens (yellow-green) MIN 5 CM 90 ABA1 7 1 Miniature (semi-dwarf) MP 1 CM 22 AN 36 29 Monopteros (embryo defective) MS1 5 CM 23 TTG 6 1 Male sterile MS2 3 CM 27 - - - Male sterile MS31 1 U - - - 48 Male sterile MS32 1 U - - - 48 Male sterile MS33 2 U - - - 48 Male sterile MS34 2 U - - - 48 Male sterile MS35 3 U - - - 48 Male sterile MS36 3 U - - - 48 Male sterile MS37 5 U - - - 48 Male sterile MS38 5 U - - - 48 Male sterile MTO1 3 CM 19 HY2/ ABI3 8/22 52 Methionine over accumulation NDR1 3 AM - 560B1 - 65 Non race-specific disease resistance NIA1 1 CM 116 GL2 3 18 Nitrate reductase defective NIA2 = CHL3 - - - 18 Nitrate reductase defective NIM1 1 CM 95* NGA128/111 17/17 "88,89" Non-inducible immunity NPH1 3 CM 61 GL1 15B 91 Non-phototrophing hypocotyl OMR1 3 CM 17 HY2 7 "68,84" L-O-methylthreonine resistant PA = LE - - - - Discontinued PDS1 1 CM 26 DIS1 7 2 Phytoene desaturation (ABA deficient) PDS2 3 CM 4 HY2 8 2 Phytoene desaturation (ABA deficient) PFL 1 CM 32 TH1 1 49 Pointed first leaves PGM 5 CM 63 YI 22 1 Phosphoglucomutase deficient PHO1 3 CM 27 G4708 3 6 Low inorganic phosphate PHYA* 1 CM 16 - - - Phytochrome defective PHYB* 2 CM 31 FVE 4 1 Phytochrome defective PI 5 CM 21 TTG 10 1 Pistillata (floral defective) PID 2 CM 58 AS - 21 Pinoid (meristem defective) PIN1 1 CM 103 CRC 3B 21 Pin-formed (floral defective) PLU 5 LO - - - 82 Pluto (root defective) POM1 1 CM 9* NGA63 1 43 Pom-pon (root defective) POM2 2 CM 45* GPA1 4B 43 Pom-pon (root defective) POP1 = CER6 - - - 53 Pollen-pistil incompatibility POP2 3 U - - - 53 Pollen-pistil incompatibility POP3 5 U - - - 53 Pollen-pistil incompatibility PRC1 5 CM 86 YI <1B 59 "Procuste (short, deformed hypocotyl)" PT = AMP1 - - - 10 Primordia timing PTL 5 CM 1 TFL1 1A 21 Petaless; petal loss PY 2 CM 49 HY1 5 1 Pyrimidine requiring QRT1 5 AM - DFR/LFY - 53 Quartet QRT2 3 CM 2* GAPC <2 53 Quartet QUI 1 AM - PVV4 8 43 Quill (root defective) RAC1* 1 CM 51 M229- M335 - 34 Resistant to Albugo candida RDS1 2 U - - - 50 Regulation of desaturases in seeds RE 2 CM 59 ER 19 1 Reticulata (dark veins) REV 5 CM 85* LFY/ NGA129 6/21 56 Revolute leaf RGN* 1 CM 1 AN 1 1 Chlorate resistant RGR = AXR4 - - - - Reduced root gravitropism RHD1 1 LO - AP1 - 35 Root hair defective RHD2 5 LO - TT3 - 35 Root hair defective RHD3 3 LO - GL1 - 35 Root hair defective RHD4 3 LO - GL1 - 35 Root hair defective RML1 4 CM 50* MI422 <1 45 Root meristemless RML2 3 AM - M457 14 45 Root meristemless RPM1 3 CM 7* M583/ G4523 2/2 36 Resistance to P. syringae pv maculicola RPP1* 3 CM 52 GL1 - 34 Recognition of Peronospora parasitica RPP2 4 CM 45 M600/ M557 - 34 Recognition of Peronospora parasitica RPP4 4 CM 38 - - 34 Recognition of Peronospora parasitica RPP5 4 CM 37 - - 34 Recognition of Peronospora parasitica RPP6 2 LO TOP - - 34 Recognition of Peronospora parasitica RPP7 1 CM 69 - - 34 Recognition of Peronospora parasitica RPP8 5 CM 58 - - 34 Recognition of Peronospora parasitica RPP9 = RAC1 - - - 34 Recognition of Peronospora parasitica RPP10 = RPP1 - - - 34 Recognition of Peronospora parasitica RPP11 3 CM 64 - - 34 Recognition of Peronospora parasitica RPP12 4 AM - AG/M557 - 34 Recognition of Peronospora parasitica RPP13 3 CM 56* M249 3A 34 Recognition of Peronospora parasitica RPS2 4 CM 55 - - - Resistant to P. syringae RPS4 5 AM - DFR - 65 Resistant to P. syringae RPS5 1 CM 11* ATTS 0477 0 77 Resistant to P. syringae RPT1 3 CM 62* BGL1 19A 58 Root phototropism RPW1 2 LO - - - 79 Recognition of powdery mildew RPW5 5 AM - NGA225 - 79 Recognition of powdery mildew RPW6 5 AM - NGA158/ 139 - 79 Recognition of powdery mildew RTN 2 CM 46* ER-M220 - 51 Reduced trichome number RTY = HLS3 - - - 76 Rooty RTY3 = HLS3 - - - 75 Rooty RXC1 2 CM 56* M323 5A 79 Resist. to X. campestris pv amoraciae SAB 1 CM 88* G4026 4 43 Sabre (root defective) SAR1 1 U MID - - 15 Suppressor of auxin resistance SEX1* 1 CM 13 AN 12 37 Starch excess SHL = STM - - - 69 Shootless SHY2 1 AM TOP NCC1 - 61 Short hypocotyl SMA4 1 CM 92* NGA280 13B 77 Symptoms mult. avirulence genotypes SOP = SEX1 - - - 37 Discontinued SPT 4 CM 68 AP2 - 21 Spatula (floral defective) SPY 3 CM 12 HY2 0 75 Spindly (altered GA transduction) STI 2 CM 4 EMB93 2 2 Stichel (unbranced trichomes) STM 1 CM 75 CH1 15B 69 Shoot meristemless STP1 2 LO - NGA168 30A 87 Stunted plant SU 5 CM 35 TTG 7 1 Suppressor of CHL4 SUL 2 CM 70 AS 10 1 Sulfurata SUP* 3 CM 35 AXR2 1 "8,30" Superman (also FLO10) SUR 2 CM 31 PHYB <1 59 Super root SUS1* 1 CM 0 AN 1 2 Abnormal suspensor SUS2* 1 CM 116 GL2 2 2 Abnormal suspensor SUS3* 1 CM 86 CLV2 2 2 Abnormal suspensor TAG1 2 CM 24 CP2 8 50 Triacylglycerol biosynthesis defect TED2 1 CM 45* NGA248 5B 24 Suppressor of DET TFL1 5 CM 2* M447/ TT4 1/15 26 Terminal flower TFL2 5 CM 15* TFL1/ EMF1 - 26 Terminal flower TH1 1 CM 33 GI 0 1 Thiamine requiring TH2 5 CM 47 TT2 1 1 Thiamine requiring TH3 4 CM 34 FCA 5 1 Thiamine requiring TIR1 3 CM 87* NGA112 2B 15 Auxin transport inhibitor resistant TIR2 1 AM BOT - - 15 Auxin transport inhibitor resistant TIR3 3 AM TOP - - 15 Auxin transport inhibitor resistant TIR4 1 AM BOT - - 15 Auxin transport inhibitor resistant TIR5 5 AM TOP - - 15 Auxin transport inhibitor resistant TIR6 4 AM TOP - - 15 Auxin transport inhibitor resistant TIR7 5 AM TOP - - 15 Auxin transport inhibitor resistant TMM 1 AM - ADH/ PAB5 9/18 78 Too many mouths (stomata) TNY 5 CM 40* TN139 0 9 Tiny TOC1 5 CM 79* EG7F2 5B 93 Timing of CAB1 TOM1 4 AM BOT JGB9 - 52 Tobamovirus multiplication TON1 = FS1 - - - 59 Tonneau TON2 = FS2 - - - 59 Tonneau TOR1 4 CM 58 - - 13 Tortifolia (twisted petioles) TRP1 5 LO - TT4 - 38 Tryptophan biosynthesis TRP2 5 AM - TSB1 0 38 Tryptophan biosynthesis TRP3 3 CM 90* TSA1 0 38 Tryptophan biosynthesis TRP4 1 CM 35 CHL1 20B 14 Tryptophan biosynthesis TRP5 5 CM 10* ASA1 0 14 Tryptophan biosynthesis TSL 5 CM 20 - - - Tousled (floral defective) TT1 1 CM 55 CH1 4 1 Transparent testa TT2 5 CM 44 TH2 1 1 Transparent testa TT3 5 CM 57 EMB9 2 "1,2" Transparent testa TT4 5 CM 13 LU 2 1 Transparent testa TT5 3 CM 81 CH6 3 1 Transparent testa TT6 3 CM 96 - - "1,2" Transparent testa TT7 5 CM 6 ALB2 10 1 Transparent testa TT8 4 CM 22 BP 7B 92 Transparent testa TT9 3 AV - GL1 5 92 Transparent testa TT10 5 CM 69 CH5 24B 92 Transparent testa TTG 5 CM 28 GA3 4 1 "Transparent testa, glabra" TWN1* 5 LO - YI-TT3 - 2 Twin (embryo defective) TWN2 1 CM 19* M219/ G12080 - 6 Twin (embryo defective) TZ 5 CM 77 BIO1 4 "1,2" Thiazole requiring UFO 1 CM 46 - - - Unusual floral organs UVH1 5 AM - NGA76 - 39 Ultraviolet hypersensitive UVH3 3 AV - GL1 <1 39 Ultraviolet hypersensitive UVH6 1 AM - NGA59 - 39 Ultraviolet hypersensitive UVR1 3 CM 53 - - 70 UV repair defective VAL1 3 CM 59 TT5 21A 84 Valine resistant VAR1 5 CM 65 CER3 18 40 Variegated VAR2 2 CM 71 ER 23 40 Variegated VR2 2 LO - - - 33 Virescens VRN1 3 CM 17* MI339 3 31 Reduced vernalization response VRN2 4 AM - NGA8/ MI422 - 31 Reduced vernalization response WAM 1 CM 89 AP1 10A 90 Waldmeister (distorted shoot) WAV5 = AUX1 - - - 58 Wavy roots XV 1 LO - - - 33 Discontinued YAK 1 U - - - 21 Yakka (disrupted inflorescence) YI 5 CM 85 EMB15 <1 "1,2" Yellow inflorescence