BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_0524
(93 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125717388|ref|YP_001034521.1| Microcompartment protein, ... 118 9e-26
gi|154495808|ref|ZP_02034504.1| hypothetical protein BACCAP... 117 2e-25
gi|125717389|ref|YP_001034522.1| Microcompartment protein, ... 110 2e-23
gi|106885042|ref|ZP_01352407.1| microcompartments protein [... 110 2e-23
gi|29376182|ref|NP_815336.1| microcompartment protein [Ente... 110 4e-23
gi|78358318|ref|YP_389767.1| microcompartment protein [Desu... 108 1e-22
gi|18309885|ref|NP_561819.1| propanediol utilization protei... 108 1e-22
gi|134299162|ref|YP_001112658.1| microcompartments protein ... 107 2e-22
gi|106894125|ref|ZP_01361247.1| microcompartments protein [... 106 4e-22
gi|150391549|ref|YP_001321598.1| microcompartments protein ... 106 4e-22
gi|16800213|ref|NP_470481.1| hypothetical protein lin1144 [... 106 5e-22
gi|119718249|ref|YP_925214.1| microcompartments protein [No... 105 6e-22
gi|148380061|ref|YP_001254602.1| ethanolamine utilization p... 105 7e-22
gi|150388103|ref|YP_001318152.1| microcompartments protein ... 105 7e-22
gi|106884872|ref|ZP_01352239.1| microcompartments protein [... 104 1e-21
gi|126699528|ref|YP_001088425.1| putative ethanolamine/prop... 104 2e-21
gi|89897737|ref|YP_521224.1| hypothetical protein DSY4991 [... 103 2e-21
gi|37542642|gb|AAL38399.1| GldA [Lactobacillus collinoides] 103 3e-21
gi|106893684|ref|ZP_01360808.1| microcompartments protein [... 103 3e-21
gi|78358310|ref|YP_389759.1| ethanolamine utilization prote... 103 4e-21
gi|120597260|ref|YP_961834.1| microcompartment protein [She... 102 5e-21
gi|19703435|ref|NP_602997.1| Ethanolamine utilization prote... 102 6e-21
gi|148544947|ref|YP_001272317.1| microcompartments protein ... 102 6e-21
gi|146291321|ref|YP_001181745.1| microcompartments protein ... 102 6e-21
gi|154497249|ref|ZP_02035945.1| hypothetical protein BACCAP... 102 8e-21
gi|153953476|ref|YP_001394241.1| Predicted microcompartment... 102 8e-21
gi|86604360|gb|ABD13958.1| propanediol utilization protein ... 101 1e-20
gi|106884891|ref|ZP_01352258.1| microcompartments protein [... 101 1e-20
gi|18857676|emb|CAD01089.1| PduA protein [Lactobacillus col... 101 1e-20
gi|134301093|ref|YP_001114589.1| microcompartments protein ... 101 1e-20
gi|89893153|ref|YP_516640.1| hypothetical protein DSY0407 [... 101 1e-20
gi|16800192|ref|NP_470460.1| hypothetical protein lin1123 [... 101 2e-20
gi|86604344|gb|ABD13950.1| propanediol utilization protein ... 100 2e-20
gi|111075052|gb|ABH04896.1| ethanolamine utilization protei... 100 2e-20
gi|148544955|ref|YP_001272325.1| microcompartments protein ... 100 3e-20
gi|153195934|ref|ZP_01940342.1| hypothetical protein LMRG_0... 100 3e-20
gi|106885190|ref|ZP_01352554.1| microcompartments protein [... 100 4e-20
gi|118443961|ref|YP_878965.1| microcompartment protein [Clo... 100 5e-20
gi|154497264|ref|ZP_02035960.1| hypothetical protein BACCAP... 99 7e-20
gi|83592244|ref|YP_425996.1| microcompartments protein [Rho... 99 8e-20
gi|154497251|ref|ZP_02035947.1| hypothetical protein BACCAP... 99 8e-20
gi|90422680|ref|YP_531050.1| microcompartments protein [Rho... 99 8e-20
gi|154497252|ref|ZP_02035948.1| hypothetical protein BACCAP... 99 9e-20
gi|150018870|ref|YP_001311124.1| microcompartments protein ... 99 1e-19
gi|29335727|emb|CAD83146.1| PduJ protein [Lactobacillus col... 99 1e-19
gi|16803199|ref|NP_464684.1| hypothetical protein lmo1159 [... 99 1e-19
gi|124263038|ref|YP_001023508.1| putative carboxysome struc... 98 1e-19
gi|153953697|ref|YP_001394462.1| Predicted microcompartment... 98 2e-19
gi|116872525|ref|YP_849306.1| propanediol utilization prote... 98 2e-19
gi|16803191|ref|NP_464676.1| hypothetical protein lmo1151 [... 97 2e-19
gi|46907369|ref|YP_013758.1| propanediol utilization protei... 97 2e-19
gi|83586696|ref|ZP_00925328.1| COG4577: Carbon dioxide conc... 97 2e-19
gi|28211119|ref|NP_782063.1| carbon dioxide concentrating m... 97 2e-19
gi|153809708|ref|ZP_01962376.1| hypothetical protein RUMOBE... 97 3e-19
gi|148322266|gb|EDK87516.1| possible carbon dioxide-concent... 97 3e-19
gi|47094992|ref|ZP_00232605.1| propanediol utilization prot... 97 3e-19
gi|154503203|ref|ZP_02040263.1| hypothetical protein RUMGNA... 97 3e-19
gi|116334198|ref|YP_795725.1| Propanediol utilization prote... 96 5e-19
gi|16800184|ref|NP_470452.1| hypothetical protein lin1115 [... 96 5e-19
gi|77959324|ref|ZP_00823345.1| COG4577: Carbon dioxide conc... 96 8e-19
gi|77975826|ref|ZP_00831360.1| COG4577: Carbon dioxide conc... 96 9e-19
gi|152971729|ref|YP_001336838.1| Propanediol utilization: p... 96 9e-19
gi|16760978|ref|NP_456595.1| putative propanediol utilizati... 95 1e-18
gi|111075049|gb|ABH04894.1| ethanolamine utilization protei... 95 1e-18
gi|83592241|ref|YP_425993.1| microcompartments protein [Rho... 95 1e-18
gi|90414630|ref|ZP_01222602.1| probable ethanolamine utiliz... 95 1e-18
gi|77962422|ref|ZP_00826242.1| COG4577: Carbon dioxide conc... 95 1e-18
gi|116619522|ref|YP_821678.1| microcompartments protein [So... 95 1e-18
gi|31324745|gb|AAP48665.1| PduJ [uncultured bacterium] 95 2e-18
gi|150018860|ref|YP_001311114.1| microcompartments protein ... 94 2e-18
gi|106893960|ref|ZP_01361083.1| microcompartments protein [... 94 2e-18
gi|150392258|ref|YP_001322307.1| microcompartments protein ... 94 2e-18
gi|83596374|gb|ABC25531.1| PduJ [Roseburia inulinivorans] 94 2e-18
gi|153940450|ref|YP_001391403.1| putative carbon dioxide co... 94 3e-18
gi|74312537|ref|YP_310956.1| putative propanediol utilizati... 94 3e-18
gi|77977314|ref|ZP_00832766.1| COG4577: Carbon dioxide conc... 94 3e-18
gi|89893154|ref|YP_516641.1| hypothetical protein DSY0408 [... 93 4e-18
gi|16761382|ref|NP_456999.1| putative ethanolamine utilizat... 93 4e-18
gi|157082265|gb|ABV11943.1| hypothetical protein CKO_00791 ... 93 4e-18
gi|62180623|ref|YP_217040.1| Propanediol utilization: polyh... 93 4e-18
gi|75186796|ref|ZP_00700063.1| COG4577: Carbon dioxide conc... 93 4e-18
gi|92110343|emb|CAJ87612.1| putative propanediol utilizatio... 93 4e-18
gi|153809710|ref|ZP_01962378.1| hypothetical protein RUMOBE... 93 4e-18
gi|114844381|ref|ZP_01454831.1| microcompartments protein [... 93 4e-18
gi|126651152|ref|ZP_01723362.1| hypothetical protein BB1490... 93 4e-18
gi|74312530|ref|YP_310949.1| putative propanediol utilizati... 93 5e-18
gi|77959317|ref|ZP_00823338.1| COG4577: Carbon dioxide conc... 93 5e-18
gi|150391552|ref|YP_001321601.1| microcompartments protein ... 93 6e-18
gi|15802979|ref|NP_289009.1| detox protein [Escherichia col... 92 6e-18
gi|74312982|ref|YP_311401.1| detox protein [Shigella sonnei... 92 8e-18
gi|16760971|ref|NP_456588.1| putative propanediol utilizati... 92 8e-18
gi|56413060|ref|YP_150135.1| putative propanediol utilizati... 92 8e-18
gi|116334190|ref|YP_795717.1| Propanediol utilization prote... 92 8e-18
gi|75237800|ref|ZP_00721816.1| COG4577: Carbon dioxide conc... 92 9e-18
gi|148380064|ref|YP_001254605.1| propanediol/ethanolamine u... 92 1e-17
gi|152971722|ref|YP_001336831.1| Propanediol utilization: p... 92 1e-17
gi|16765785|ref|NP_461400.1| putative detox protein [Salmon... 91 1e-17
gi|154503201|ref|ZP_02040261.1| hypothetical protein RUMGNA... 91 2e-17
gi|123442944|ref|YP_001006919.1| putative propanediol utili... 91 2e-17
gi|77962430|ref|ZP_00826250.1| COG4577: Carbon dioxide conc... 91 2e-17
gi|152971322|ref|YP_001336431.1| detox protein [Klebsiella ... 91 2e-17
gi|83596376|gb|ABC25533.1| PduA [Roseburia inulinivorans] 91 2e-17
gi|123442951|ref|YP_001006926.1| putative propanediol utili... 91 2e-17
gi|89109262|ref|AP_003042.1| predicted carboxysome structur... 91 3e-17
gi|77975834|ref|ZP_00831368.1| COG4577: Carbon dioxide conc... 90 3e-17
gi|124025321|ref|YP_001014437.1| carboxysome structural pro... 90 4e-17
gi|72383721|ref|YP_293076.1| carboxysome shell peptide, Cso... 90 4e-17
gi|77977039|ref|ZP_00832500.1| COG4577: Carbon dioxide conc... 90 4e-17
gi|78043317|ref|YP_359540.1| bacterial microcompartments fa... 89 6e-17
gi|120597255|ref|YP_961829.1| microcompartment protein [She... 89 6e-17
gi|120554159|ref|YP_958510.1| microcompartments protein [Ma... 89 7e-17
gi|75242283|ref|ZP_00726045.1| COG4577: Carbon dioxide conc... 89 8e-17
gi|110644713|ref|YP_672443.1| hypothetical protein ECP_4606... 89 9e-17
gi|118444984|ref|YP_878963.1| PduA protein-like protein [Cl... 89 9e-17
gi|51246897|ref|YP_066781.1| ethanolamine utilization prote... 87 2e-16
gi|87302496|ref|ZP_01085313.1| possible carbon dioxide conc... 87 2e-16
gi|116620453|ref|YP_822609.1| microcompartments protein [So... 87 3e-16
gi|153953479|ref|YP_001394244.1| Predicted microcompartment... 87 3e-16
gi|51246886|ref|YP_066770.1| ethanolamine utilization prote... 87 3e-16
gi|33240008|ref|NP_874950.1| Carboxysome shell peptide, Cso... 87 3e-16
gi|88810437|ref|ZP_01125694.1| carboxysome shell peptide, C... 86 5e-16
gi|37542657|gb|AAQ93021.1| GldA [Lactobacillus hilgardii] 86 6e-16
gi|117618230|ref|YP_855875.1| bacterial microcompartments f... 86 7e-16
gi|84518394|ref|ZP_01005743.1| Carboxysome shell peptide [P... 86 7e-16
gi|120554158|ref|YP_958509.1| microcompartments protein [Ma... 86 8e-16
gi|87302503|ref|ZP_01085320.1| carboxysome shell peptide [S... 85 1e-15
gi|117617905|ref|YP_855876.1| bacterial microcompartments f... 85 2e-15
gi|6014734|sp|P45690|CSOB_THINE Major carboxysome shell pro... 84 2e-15
gi|145953910|ref|ZP_01802917.1| hypothetical protein CdifQ_... 84 2e-15
gi|126699526|ref|YP_001088423.1| putative ethanolamine/prop... 84 2e-15
gi|75242282|ref|ZP_00726044.1| COG4577: Carbon dioxide conc... 84 2e-15
gi|153938952|ref|YP_001391414.1| bacterial microcompartment... 84 3e-15
gi|75765967|pdb|2A1B|A Chain A, Carboxysome Shell Protein C... 84 3e-15
gi|16329368|ref|NP_440096.1| carbon dioxide concentrating m... 84 4e-15
gi|148380075|ref|YP_001254616.1| propanediol utilization pr... 84 4e-15
gi|113952757|ref|YP_731163.1| possible carbon dioxide conce... 84 4e-15
gi|75242284|ref|ZP_00726046.1| COG4577: Carbon dioxide conc... 83 4e-15
gi|134301110|ref|YP_001114606.1| microcompartments protein ... 83 4e-15
gi|85715081|ref|ZP_01046065.1| Carboxysome structural pepti... 83 4e-15
gi|89897754|ref|YP_521241.1| hypothetical protein DSY5008 [... 83 5e-15
gi|75676170|ref|YP_318591.1| Carboxysome structural peptide... 83 5e-15
gi|88810436|ref|ZP_01125693.1| carboxysome shell peptide, C... 83 6e-15
gi|148254111|ref|YP_001238696.1| major carboxysome shell pr... 83 6e-15
gi|90414631|ref|ZP_01222603.1| probable ethanolamine utiliz... 83 6e-15
gi|92109478|ref|YP_571766.1| carboxysome structural peptide... 83 6e-15
gi|114330821|ref|YP_747043.1| microcompartments protein [Ni... 82 6e-15
gi|4105526|gb|AAD02453.1| carboxysome structural polypeptid... 82 6e-15
gi|33861106|ref|NP_892667.1| carboxysome shell protein CsoS... 82 9e-15
gi|150391564|ref|YP_001321613.1| microcompartments protein ... 82 9e-15
gi|117621491|ref|YP_855874.1| ethanolamine utilization prot... 82 9e-15
gi|84518401|ref|ZP_01005750.1| carboxysome shell protein [P... 82 9e-15
gi|33240001|ref|NP_874943.1| Carboxysome shell peptide, Cso... 82 1e-14
gi|3182943|sp|O30709|CCMK_SYNP2 Carbon dioxide concentratin... 82 1e-14
gi|116619462|ref|YP_821618.1| microcompartments protein [So... 82 1e-14
gi|123965848|ref|YP_001010929.1| carboxysome shell protein ... 82 1e-14
gi|33863469|ref|NP_895029.1| carboxysome structural protein... 82 1e-14
gi|32472047|ref|NP_865041.1| probable ethanolamine utilizat... 82 1e-14
gi|78778934|ref|YP_397046.1| carboxysome shell protein CsoS... 82 1e-14
gi|112789925|gb|ABI21602.1| Smu11B [uncultured organism] 82 1e-14
gi|126657859|ref|ZP_01729012.1| carbon dioxide concentratin... 82 1e-14
gi|33863476|ref|NP_895036.1| carboxysome shell protein CsoS... 82 1e-14
gi|37521665|ref|NP_925042.1| carbon dioxide concentrating m... 82 1e-14
gi|33866244|ref|NP_897803.1| possible carbon dioxide concen... 82 1e-14
gi|78485191|ref|YP_391116.1| microcompartments protein [Thi... 82 1e-14
gi|88807726|ref|ZP_01123238.1| carboxysome shell peptide, C... 81 1e-14
gi|88807733|ref|ZP_01123245.1| possible carbon dioxide conc... 81 1e-14
gi|82799250|gb|ABB92177.1| putative carbon dioxide concentr... 81 1e-14
gi|119509595|ref|ZP_01628742.1| microcompartments protein [... 81 2e-14
gi|146339305|ref|YP_001204353.1| major carboxysome shell pr... 81 2e-14
gi|148241917|ref|YP_001227074.1| Carboxysome shell peptide ... 81 2e-14
gi|78485189|ref|YP_391114.1| microcompartments protein [Thi... 81 2e-14
gi|90655619|gb|ABD96455.1| possible carbon dioxide concentr... 81 2e-14
gi|124022516|ref|YP_001016823.1| carboxysome shell protein ... 81 2e-14
gi|151335805|gb|ABS00400.1| carboxysome shell peptide [Paul... 81 2e-14
gi|46359637|dbj|BAD15318.1| carboxysome shell peptide [Hydr... 81 2e-14
gi|90655511|gb|ABD96350.1| possible carbon dioxide concentr... 81 2e-14
gi|22298490|ref|NP_681737.1| carbon dioxide concentrating m... 81 2e-14
gi|86606272|ref|YP_475035.1| carbon dioxide concentrating m... 81 2e-14
gi|46359638|dbj|BAD15319.1| carboxysome shell peptide [Hydr... 81 2e-14
gi|4836668|gb|AAD30516.1|AF129925_10 CsoS1B [Acidithiobacil... 80 2e-14
gi|67920776|ref|ZP_00514295.1| microcompartments protein [C... 80 2e-14
gi|90655407|gb|ABD96248.1| possible carbon dioxide concentr... 80 3e-14
gi|78485190|ref|YP_391115.1| microcompartments protein [Thi... 80 3e-14
gi|46359639|dbj|BAD15320.1| carboxysome shell peptide [Hydr... 80 3e-14
gi|3273487|gb|AAC24755.1| CsoS1A [Thiobacillus intermedius ... 80 3e-14
gi|146339304|ref|YP_001204352.1| major carboxysome shell pr... 80 3e-14
gi|148241924|ref|YP_001227081.1| Carboxysome shell peptide,... 80 3e-14
gi|78212303|ref|YP_381082.1| possible carbon dioxide concen... 80 4e-14
gi|113477306|ref|YP_723367.1| microcompartments protein [Tr... 80 4e-14
gi|17228362|ref|NP_484910.1| carbon dioxide concentrating m... 80 5e-14
gi|148239020|ref|YP_001224407.1| Carboxysome shell peptide,... 80 5e-14
gi|153955996|ref|YP_001396761.1| hypothetical protein CKL_3... 80 5e-14
gi|51246893|ref|YP_066777.1| similar to ethanolamine utiliz... 79 6e-14
gi|111026482|ref|YP_708765.1| hypothetical protein RHA1_ro1... 79 7e-14
gi|3273486|gb|AAC24754.1| CsoS1C [Thiobacillus intermedius ... 79 8e-14
gi|12597331|gb|AAG60043.1|AF307090_8 carboxysome structural... 79 8e-14
gi|148380076|ref|YP_001254617.1| propanediol utilization pr... 79 9e-14
gi|3273488|gb|AAC24756.1| CsoS1B [Thiobacillus intermedius ... 79 9e-14
gi|88810435|ref|ZP_01125692.1| carboxysome shell peptide, C... 79 9e-14
gi|87312239|ref|ZP_01094340.1| probable ethanolamine utiliz... 79 9e-14
gi|150388101|ref|YP_001318150.1| microcompartments protein ... 79 1e-13
gi|153939632|ref|YP_001391415.1| bacterial microcompartment... 79 1e-13
gi|74318662|ref|YP_316402.1| Carboxysome structural peptide... 79 1e-13
gi|67920777|ref|ZP_00514296.1| microcompartments protein [C... 79 1e-13
gi|86609254|ref|YP_478016.1| carbon dioxide concentrating m... 78 1e-13
gi|119509594|ref|ZP_01628741.1| microcompartments protein [... 78 1e-13
gi|3282392|gb|AAC24976.1| carboxysome shell peptide CsoS1B ... 78 1e-13
gi|86606273|ref|YP_475036.1| carbon dioxide concentrating m... 78 1e-13
gi|4836667|gb|AAD30515.1|AF129925_9 CsoS1A [Acidithiobacill... 78 1e-13
gi|126657858|ref|ZP_01729011.1| carbon dioxide concentratin... 78 2e-13
gi|89897740|ref|YP_521227.1| hypothetical protein DSY4994 [... 78 2e-13
gi|109647945|ref|ZP_01371848.1| microcompartments protein [... 78 2e-13
gi|56750144|ref|YP_170845.1| putative carboxysome assembly ... 78 2e-13
gi|23128652|ref|ZP_00110492.1| COG4577: Carbon dioxide conc... 78 2e-13
gi|114330820|ref|YP_747042.1| microcompartments protein [Ni... 78 2e-13
gi|126651148|ref|ZP_01723358.1| ethanolamine utilization pr... 78 2e-13
gi|16329367|ref|NP_440095.1| carbon dioxide concentrating m... 77 2e-13
gi|89897755|ref|YP_521242.1| hypothetical protein DSY5009 [... 77 2e-13
gi|37521664|ref|NP_925041.1| carbon dioxide concentrating m... 77 2e-13
gi|1169109|sp|P45689|CSOA_THINE Major carboxysome shell pro... 77 2e-13
gi|90422677|ref|YP_531047.1| microcompartments protein [Rho... 77 3e-13
gi|85715082|ref|ZP_01046066.1| Carboxysome structural polyp... 77 3e-13
gi|4836666|gb|AAD30514.1|AF129925_8 CsoS1C [Acidithiobacill... 77 3e-13
gi|75676171|ref|YP_318592.1| Carboxysome structural polypep... 77 4e-13
gi|82799296|gb|ABB92222.1| carbon dioxide concentrating mec... 77 4e-13
gi|124022524|ref|YP_001016831.1| hypothetical protein P9303... 77 4e-13
gi|134301115|ref|YP_001114611.1| microcompartments protein ... 77 4e-13
gi|78358324|ref|YP_389773.1| carbon dioxide concentrating m... 77 4e-13
gi|51246882|ref|YP_066766.1| ethanolamine utilization prote... 77 4e-13
gi|124263044|ref|YP_001023514.1| Propanediol utilization [M... 76 5e-13
gi|113477305|ref|YP_723366.1| microcompartments protein [Tr... 76 5e-13
gi|106893699|ref|ZP_01360823.1| similar to carbon dioxide c... 76 5e-13
gi|116072228|ref|ZP_01469495.1| possible carbon dioxide con... 76 5e-13
gi|17228363|ref|NP_484911.1| carbon dioxide concentrating m... 76 5e-13
gi|22298489|ref|NP_681736.1| carbon dioxide concentrating m... 76 7e-13
gi|78185175|ref|YP_377610.1| possible carbon dioxide concen... 76 8e-13
gi|1169111|sp|P45688|CSOC_THINE Major carboxysome shell pro... 75 8e-13
gi|12597330|gb|AAG60042.1|AF307090_7 carboxysome structural... 75 9e-13
gi|119488744|ref|ZP_01621753.1| carbon dioxide concentratin... 75 1e-12
gi|74318663|ref|YP_316403.1| carboxysome shell protein CsoS... 75 1e-12
gi|92109477|ref|YP_571765.1| carboxysome structural polypep... 75 1e-12
gi|113477300|ref|YP_723361.1| microcompartments protein [Tr... 75 1e-12
gi|153174247|ref|ZP_01929786.1| hypothetical protein LMIG_0... 74 2e-12
gi|74318664|ref|YP_316404.1| carboxysome shell protein, Cso... 74 2e-12
gi|149176729|ref|ZP_01855340.1| hypothetical protein PM8797... 74 2e-12
gi|106893957|ref|ZP_01361080.1| microcompartments protein [... 74 2e-12
gi|37521660|ref|NP_925037.1| carbon dioxide concentrating m... 74 3e-12
gi|26250352|ref|NP_756392.1| hypothetical protein c4532 [Es... 74 3e-12
gi|53688425|ref|ZP_00110497.2| COG4577: Carbon dioxide conc... 74 3e-12
gi|153195955|ref|ZP_01940363.1| hypothetical protein LMRG_0... 74 3e-12
gi|16803218|ref|NP_464703.1| hypothetical protein lmo1178 [... 74 3e-12
gi|17227814|ref|NP_484362.1| carbon dioxide concentrating m... 74 3e-12
gi|119509599|ref|ZP_01628746.1| carbon dioxide concentratin... 73 4e-12
gi|47095020|ref|ZP_00232633.1| ethanolamine utilization pro... 73 4e-12
gi|17228358|ref|NP_484906.1| carbon dioxide concentrating m... 73 5e-12
gi|97574|pir||B33492 hypothetical protein (rbcL 5' region) ... 73 6e-12
gi|119488745|ref|ZP_01621754.1| carbon dioxide concentratin... 73 6e-12
gi|116075366|ref|ZP_01472626.1| possible carbon dioxide con... 73 6e-12
gi|56750140|ref|YP_170841.1| carbon dioxide concentrating m... 73 6e-12
gi|116872552|ref|YP_849333.1| ethanolamine utilization prot... 73 7e-12
gi|38926|emb|CAA26971.1| unnamed protein product [Synechoco... 72 7e-12
gi|75910906|ref|YP_325202.1| microcompartments protein [Ana... 72 7e-12
gi|46907398|ref|YP_013787.1| ethanolamine utilization prote... 72 7e-12
gi|106893687|ref|ZP_01360811.1| microcompartments protein [... 72 8e-12
gi|120406512|ref|YP_956341.1| microcompartments protein [My... 72 8e-12
gi|75910664|ref|YP_324960.1| microcompartments protein [Ana... 72 9e-12
gi|16331455|ref|NP_442183.1| carbon dioxide concentrating m... 72 9e-12
gi|86609250|ref|YP_478012.1| bacterial microcompartments fa... 72 9e-12
gi|16800211|ref|NP_470479.1| hypothetical protein lin1142 [... 72 1e-11
gi|116620454|ref|YP_822610.1| microcompartments protein [So... 72 1e-11
gi|110800071|ref|YP_695343.1| ethanolamine utilization prot... 72 1e-11
gi|38925|emb|CAA26970.1| unnamed protein product [Synechoco... 72 1e-11
gi|18309883|ref|NP_561817.1| propanediol utilization protei... 72 1e-11
gi|67923839|ref|ZP_00517299.1| microcompartments protein [C... 71 2e-11
gi|86606277|ref|YP_475040.1| bacterial microcompartments fa... 71 2e-11
gi|106884888|ref|ZP_01352255.1| microcompartments protein [... 70 3e-11
gi|22298691|ref|NP_681938.1| hypothetical protein tll1148 [... 70 3e-11
gi|106884875|ref|ZP_01352242.1| microcompartments protein [... 70 4e-11
gi|19703434|ref|NP_602996.1| Ethanolamine utilization prote... 70 4e-11
gi|148322704|gb|EDK87954.1| ethanolamine utilization protei... 70 5e-11
gi|149176730|ref|ZP_01855341.1| probable ethanolamine utili... 70 6e-11
gi|22652034|gb|AAN03577.1|AF381046_2 carbon dioxide concent... 69 6e-11
gi|119493138|ref|ZP_01624044.1| microcompartments protein [... 69 6e-11
gi|134301096|ref|YP_001114592.1| microcompartments protein ... 69 9e-11
gi|118472671|ref|YP_884687.1| propanediol utilization prote... 68 1e-10
gi|106884876|ref|ZP_01352243.1| microcompartments protein [... 68 2e-10
gi|126658236|ref|ZP_01729386.1| carbon dioxide concentratin... 68 2e-10
gi|106893959|ref|ZP_01361082.1| microcompartments protein [... 68 2e-10
gi|78044315|ref|YP_359537.1| propanediol utilization protei... 68 2e-10
gi|106893700|ref|ZP_01360824.1| similar to carbon dioxide c... 68 2e-10
gi|150392261|ref|YP_001322310.1| microcompartments protein ... 67 2e-10
gi|113477734|ref|YP_723795.1| microcompartments protein [Tr... 67 3e-10
gi|119488749|ref|ZP_01621758.1| carbon dioxide concentratin... 67 4e-10
gi|23127325|ref|ZP_00109198.1| COG4577: Carbon dioxide conc... 67 4e-10
gi|108797173|ref|YP_637370.1| microcompartments protein [My... 66 6e-10
gi|51245673|ref|YP_065557.1| similar to carbon dioxide conc... 66 6e-10
gi|78358320|ref|YP_389769.1| Carbon dioxide concentrating m... 66 7e-10
gi|116621376|ref|YP_823532.1| microcompartments protein [So... 66 7e-10
gi|87123950|ref|ZP_01079800.1| possible carbon dioxide conc... 65 9e-10
gi|28211782|ref|NP_782726.1| carbon dioxide concentrating m... 65 9e-10
gi|150018868|ref|YP_001311122.1| microcompartments protein ... 65 1e-09
gi|46907376|ref|YP_013765.1| propanediol utilization protei... 64 2e-09
gi|56751236|ref|YP_171937.1| carbon dioxide concentrating m... 64 2e-09
gi|150391565|ref|YP_001321614.1| microcompartments protein ... 64 3e-09
gi|29376184|ref|NP_815338.1| microcompartment protein famil... 64 3e-09
gi|51246883|ref|YP_066767.1| similar to ethanolamine utiliz... 64 4e-09
gi|145221830|ref|YP_001132508.1| microcompartments protein ... 63 4e-09
gi|22298497|ref|NP_681744.1| carbon dioxide concentrating m... 63 6e-09
gi|106885044|ref|ZP_01352409.1| microcompartments protein [... 62 9e-09
gi|16800191|ref|NP_470459.1| hypothetical protein lin1122 [... 62 1e-08
gi|16803198|ref|NP_464683.1| hypothetical protein lmo1158 [... 61 2e-08
gi|114844374|ref|ZP_01454824.1| microcompartments protein [... 61 2e-08
gi|87312238|ref|ZP_01094339.1| hypothetical protein DSM3645... 61 2e-08
gi|26248814|ref|NP_754854.1| Ethanolamine utilization prote... 60 5e-08
gi|150392259|ref|YP_001322308.1| microcompartments protein ... 60 6e-08
gi|116872532|ref|YP_849313.1| propanediol utilization prote... 59 8e-08
gi|78042706|ref|YP_359539.1| bacterial microcompartments fa... 59 9e-08
gi|74312973|ref|YP_311392.1| hypothetical protein SSON_2527... 59 1e-07
gi|15802969|ref|NP_288999.1| hypothetical protein Z3703 [Es... 59 1e-07
gi|30063829|ref|NP_838000.1| hypothetical protein S2639 [Sh... 59 1e-07
gi|75178038|ref|ZP_00698097.1| COG4577: Carbon dioxide conc... 58 2e-07
gi|75240096|ref|ZP_00724055.1| COG4577: Carbon dioxide conc... 58 2e-07
gi|91213910|ref|YP_543896.1| hypothetical protein UTI89_C49... 58 2e-07
gi|75242290|ref|ZP_00726052.1| COG4577: Carbon dioxide conc... 58 2e-07
gi|38704086|ref|NP_311336.2| hypothetical protein ECs3309 [... 58 2e-07
gi|82544897|ref|YP_408844.1| hypothetical protein SBO_2463 ... 57 3e-07
gi|32472046|ref|NP_865040.1| hypothetical protein RB2585 [R... 57 3e-07
gi|75765958|pdb|2A10|A Chain A, Carboxysome Shell Protein C... 57 4e-07
gi|16330039|ref|NP_440767.1| carbon dioxide concentrating m... 57 4e-07
gi|153893388|ref|ZP_02014122.1| microcompartments protein [... 56 5e-07
gi|126654744|ref|ZP_01726278.1| carbon dioxide concentratin... 56 5e-07
gi|77977049|ref|ZP_00832510.1| COG4577: Carbon dioxide conc... 56 6e-07
gi|67920628|ref|ZP_00514148.1| microcompartments protein [C... 55 9e-07
gi|121607658|ref|YP_995465.1| microcompartments protein [Ve... 55 9e-07
gi|117618322|ref|YP_855868.1| bacterial microcompartments p... 55 1e-06
gi|92110351|emb|CAJ87620.1| putative propanediol utilizatio... 55 1e-06
gi|75186804|ref|ZP_00700071.1| COG4577: Carbon dioxide conc... 55 1e-06
gi|74312538|ref|YP_310957.1| putative propanediol utilizati... 55 1e-06
gi|123442952|ref|YP_001006927.1| putative propanediol utili... 54 2e-06
gi|153893386|ref|ZP_02014120.1| microcompartments protein [... 54 2e-06
gi|148322265|gb|EDK87515.1| possible carbon dioxide-concent... 54 2e-06
gi|22299139|ref|NP_682386.1| carbon dioxide concentrating m... 54 2e-06
gi|119511480|ref|ZP_01630590.1| carbon dioxide concentratin... 54 3e-06
gi|77959316|ref|ZP_00823337.1| COG4577: Carbon dioxide conc... 54 3e-06
gi|154503202|ref|ZP_02040262.1| hypothetical protein RUMGNA... 53 6e-06
gi|77977306|ref|ZP_00832758.1| COG4577: Carbon dioxide conc... 52 7e-06
>gi|125717388|ref|YP_001034521.1| Microcompartment protein, putative [Streptococcus sanguinis SK36]
gi|125497305|gb|ABN43971.1| Microcompartment protein, putative [Streptococcus sanguinis SK36]
Length = 93
Score = 118 bits (296), Expect = 9e-26, Method: Composition-based stats.
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD
Sbjct: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
AGAAAAENVGELISVHVIPRPHAEVEVILPHQE
Sbjct: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
>gi|154495808|ref|ZP_02034504.1| hypothetical protein BACCAP_00087 [Bacteroides capillosus ATCC
29799]
gi|150275006|gb|EDN02054.1| hypothetical protein BACCAP_00087 [Bacteroides capillosus ATCC
29799]
Length = 231
Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats.
Identities = 81/91 (89%), Positives = 85/91 (93%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MAN NALGMVETRGLV AIEAADAMVKAANV L+GKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 133 MANTNALGMVETRGLVAAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATD 192
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPH 91
AGAAAAE VGEL+SVHVIPRPHAEV+ +LPH
Sbjct: 193 AGAAAAEKVGELVSVHVIPRPHAEVDFVLPH 223
>gi|125717389|ref|YP_001034522.1| Microcompartment protein, putative [Streptococcus sanguinis SK36]
gi|125497306|gb|ABN43972.1| Microcompartment protein, putative [Streptococcus sanguinis SK36]
Length = 91
Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/90 (97%), Positives = 90/90 (100%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MANANALGMVET+GLVGAIEAADAMVKAANVTLIGKEQVGAGLVTV+VRGDVGAVKAATD
Sbjct: 1 MANANALGMVETKGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVLVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAAENVGELISVHVIPRPHAEVEVILP
Sbjct: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
>gi|106885042|ref|ZP_01352407.1| microcompartments protein [Clostridium phytofermentans ISDg]
gi|106767392|gb|EAT24106.1| microcompartments protein [Clostridium phytofermentans ISDg]
Length = 96
Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/91 (89%), Positives = 87/91 (95%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+N NALGM+ET+GLVGAIEAADAMVKAANV+LIGKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSNTNALGMIETKGLVGAIEAADAMVKAANVSLIGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPH 91
AGAAAAE VGELISVHVIPRPH+EV+ ILPH
Sbjct: 61 AGAAAAERVGELISVHVIPRPHSEVDAILPH 91
>gi|29376182|ref|NP_815336.1| microcompartment protein [Enterococcus faecalis V583]
gi|29343645|gb|AAO81406.1| microcompartment protein [Enterococcus faecalis V583]
Length = 96
Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats.
Identities = 80/91 (87%), Positives = 86/91 (94%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M++ NALGM+ETRGLVGA+EAADAMVKAANVTLIGKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSSTNALGMIETRGLVGAVEAADAMVKAANVTLIGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPH 91
AGAAAAE VGEL+SVHVIPRPH EV+ ILPH
Sbjct: 61 AGAAAAERVGELLSVHVIPRPHTEVDAILPH 91
>gi|78358318|ref|YP_389767.1| microcompartment protein [Desulfovibrio desulfuricans G20]
gi|78220723|gb|ABB40072.1| microcompartment protein [Desulfovibrio desulfuricans G20]
Length = 94
Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats.
Identities = 79/93 (84%), Positives = 88/93 (94%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+++NALGM+ETRGLVGA+EAADAMVKAANVTLIG+ QVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSSSNALGMIETRGLVGAVEAADAMVKAANVTLIGRSQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
AGAAAA NVGEL+SVHVIPRPH+EVE+ILP E
Sbjct: 61 AGAAAANNVGELVSVHVIPRPHSEVEMILPKVE 93
>gi|18309885|ref|NP_561819.1| propanediol utilization protein [Clostridium perfringens str. 13]
gi|110800197|ref|YP_695345.1| ethanolamine utilization protein EutM [Clostridium perfringens
ATCC 13124]
gi|18144563|dbj|BAB80609.1| propanediol utilization protein [Clostridium perfringens str. 13]
gi|110674844|gb|ABG83831.1| ethanolamine utilization protein EutM [Clostridium perfringens
ATCC 13124]
Length = 96
Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/90 (90%), Positives = 85/90 (94%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MANANALGM+ETRGLVGAIEAADAMVKAANV L+GKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAAE VG+LISVHVIPRPH EV+ ILP
Sbjct: 61 AGAAAAERVGDLISVHVIPRPHFEVDAILP 90
>gi|134299162|ref|YP_001112658.1| microcompartments protein [Desulfotomaculum reducens MI-1]
gi|134051862|gb|ABO49833.1| microcompartments protein [Desulfotomaculum reducens MI-1]
Length = 95
Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats.
Identities = 76/93 (81%), Positives = 84/93 (90%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+N NALGM+ET+GL+GAIEAADAMVKAANV LIGK VG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSNTNALGMIETKGLIGAIEAADAMVKAANVYLIGKVHVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
AGAAAA+ VGELISVHVIPRPH +VE++LP E
Sbjct: 61 AGAAAAQRVGELISVHVIPRPHGDVELVLPMNE 93
>gi|106894125|ref|ZP_01361247.1| microcompartments protein [Clostridium sp. OhILAs]
gi|106774610|gb|EAT31172.1| microcompartments protein [Clostridium sp. OhILAs]
Length = 97
Score = 106 bits (265), Expect = 4e-22, Method: Composition-based stats.
Identities = 81/90 (90%), Positives = 85/90 (94%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MAN NALGM+ET+GLV A+EAADAMVKAANVTLIGKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MANTNALGMIETKGLVAAVEAADAMVKAANVTLIGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAAE VGELISVHVIPRPH EV+VILP
Sbjct: 61 AGAAAAEAVGELISVHVIPRPHMEVDVILP 90
>gi|150391549|ref|YP_001321598.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149951411|gb|ABR49939.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 99
Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 85/89 (95%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGM+ET+GLVG+IEAADAMVKAANV+L+GKEQ+GAGLVTVMVRGDVGAVKAATDAGA+
Sbjct: 4 DALGMIETKGLVGSIEAADAMVKAANVSLVGKEQIGAGLVTVMVRGDVGAVKAATDAGAS 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQE 93
AA+ VGELISVHVIPRPH EVE ILP ++
Sbjct: 64 AAKRVGELISVHVIPRPHGEVETILPMKK 92
>gi|16800213|ref|NP_470481.1| hypothetical protein lin1144 [Listeria innocua Clip11262]
gi|16803220|ref|NP_464705.1| hypothetical protein lmo1180 [Listeria monocytogenes EGD-e]
gi|46907400|ref|YP_013789.1| ethanolamine utilization protein, putative [Listeria
monocytogenes str. 4b F2365]
gi|47091981|ref|ZP_00229775.1| ethanolamine utilization protein, putative [Listeria
monocytogenes str. 4b H7858]
gi|47095022|ref|ZP_00232635.1| ethanolamine utilization protein, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|116872554|ref|YP_849335.1| propanediol/ethanolamine utilization protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|153166540|ref|ZP_01927080.1| hypothetical protein LMHG_02204 [Listeria monocytogenes FSL
N1-017]
gi|153174249|ref|ZP_01929788.1| hypothetical protein LMIG_02501 [Listeria monocytogenes FSL
N3-165]
gi|153179268|ref|ZP_01932487.1| hypothetical protein LMMG_00138 [Listeria monocytogenes F6900]
gi|153184655|ref|ZP_01935382.1| hypothetical protein LMOG_01292 [Listeria monocytogenes J0161]
gi|153190565|ref|ZP_01937954.1| hypothetical protein LMPG_01124 [Listeria monocytogenes J2818]
gi|153195957|ref|ZP_01940365.1| hypothetical protein LMRG_00626 [Listeria monocytogenes 10403S]
gi|153201891|ref|ZP_01943648.1| hypothetical protein LMSG_01307 [Listeria monocytogenes HPB2262]
gi|16410596|emb|CAC99258.1| lmo1180 [Listeria monocytogenes]
gi|16413603|emb|CAC96375.1| lin1144 [Listeria innocua]
gi|46880668|gb|AAT03966.1| putative ethanolamine utilization protein [Listeria monocytogenes
str. 4b F2365]
gi|47016640|gb|EAL07560.1| ethanolamine utilization protein, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|47019697|gb|EAL10436.1| ethanolamine utilization protein, putative [Listeria
monocytogenes str. 4b H7858]
gi|116741432|emb|CAK20556.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|126942626|gb|EBA20363.1| hypothetical protein LMOG_01292 [Listeria monocytogenes J0161]
gi|127634239|gb|EBA23625.1| hypothetical protein LMRG_00626 [Listeria monocytogenes 10403S]
gi|127765947|gb|EBA26291.1| hypothetical protein LMPG_01124 [Listeria monocytogenes J2818]
gi|133727467|gb|EBA29165.1| hypothetical protein LMHG_02204 [Listeria monocytogenes FSL
N1-017]
gi|133730447|gb|EBA32145.1| hypothetical protein LMIG_02501 [Listeria monocytogenes FSL
N3-165]
gi|133732753|gb|EBA34451.1| hypothetical protein LMMG_00138 [Listeria monocytogenes F6900]
gi|133735680|gb|EBA37378.1| hypothetical protein LMSG_01307 [Listeria monocytogenes HPB2262]
Length = 94
Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/90 (88%), Positives = 87/90 (96%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MANANALGM+ET+GLVGA+EAADAMVKAANVTL+GKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAAE VGEL+SVHVIPRPH+EV+ ILP
Sbjct: 61 AGAAAAERVGELLSVHVIPRPHSEVDAILP 90
>gi|119718249|ref|YP_925214.1| microcompartments protein [Nocardioides sp. JS614]
gi|119538910|gb|ABL83527.1| microcompartments protein [Nocardioides sp. JS614]
Length = 104
Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats.
Identities = 73/87 (83%), Positives = 80/87 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLVG+IEAADAMVKAANVTLIGKE +G G VTVMVRGDVGAVKAATDAGAAA
Sbjct: 8 ALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAATDAGAAA 67
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQ 92
A+ VG+L+SVHVIPRPH +VE ILP Q
Sbjct: 68 AQRVGDLVSVHVIPRPHGDVEFILPSQ 94
>gi|148380061|ref|YP_001254602.1| ethanolamine utilization protein [Clostridium botulinum A str.
ATCC 3502]
gi|153931453|ref|YP_001384358.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|153934975|ref|YP_001387895.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
gi|153939609|ref|YP_001391400.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
gi|148289545|emb|CAL83646.1| putative ethanolamine utilization protein [Clostridium botulinum
A str. ATCC 3502]
gi|152927497|gb|ABS32997.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152930889|gb|ABS36388.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
gi|152935505|gb|ABS41003.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
Length = 96
Score = 105 bits (263), Expect = 7e-22, Method: Composition-based stats.
Identities = 75/86 (87%), Positives = 82/86 (95%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGM+ET+GLVG+IEAADAMVKAANV LIGKE VG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 4 DALGMIETKGLVGSIEAADAMVKAANVYLIGKEYVGGGLVTVMVRGDVGAVKAATDAGAA 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA+ VGEL+SVHVIPRPH+EVEVILP
Sbjct: 64 AAQRVGELVSVHVIPRPHSEVEVILP 89
>gi|150388103|ref|YP_001318152.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149947965|gb|ABR46493.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 94
Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats.
Identities = 79/91 (86%), Positives = 84/91 (92%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MA +NALGM+ET+GLVGAIEAADAMVKAANVTL+GKE VG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MAISNALGMIETKGLVGAIEAADAMVKAANVTLLGKEHVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPH 91
AGAAAAE VGEL+SVHVIPRPH EVE ILP
Sbjct: 61 AGAAAAERVGELMSVHVIPRPHGEVETILPQ 91
>gi|106884872|ref|ZP_01352239.1| microcompartments protein [Clostridium phytofermentans ISDg]
gi|106767638|gb|EAT24350.1| microcompartments protein [Clostridium phytofermentans ISDg]
Length = 96
Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats.
Identities = 73/89 (82%), Positives = 83/89 (93%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGM+ET+GLVG+IEAADAMVKAANVTLIGKE VG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 4 DALGMIETKGLVGSIEAADAMVKAANVTLIGKEFVGGGLVTVMVRGDVGAVKAATDAGAA 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQE 93
AA+ VGEL+SVHVIPRPH +V +ILP ++
Sbjct: 64 AAQRVGELVSVHVIPRPHGDVAMILPQEK 92
>gi|126699528|ref|YP_001088425.1| putative ethanolamine/propanediol utilization protein
[Clostridium difficile 630]
gi|145953912|ref|ZP_01802919.1| hypothetical protein CdifQ_04002201 [Clostridium difficile
QCD-32g58]
gi|115250965|emb|CAJ68794.1| putative ethanolamine/propanediol utilization protein
[Clostridium difficile 630]
Length = 95
Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/90 (88%), Positives = 85/90 (94%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MA+ANALGM+ET+GLVGAIEAADAMVKAANV L+GKEQVG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MASANALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAAE VGELISVHVIPRPH EV+ ILP
Sbjct: 61 AGAAAAERVGELISVHVIPRPHFEVDAILP 90
>gi|89897737|ref|YP_521224.1| hypothetical protein DSY4991 [Desulfitobacterium hafniense Y51]
gi|109647948|ref|ZP_01371851.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|89337185|dbj|BAE86780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109641038|gb|EAT50593.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 95
Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+ ALG++ET+GLVGAIEAADAMVKAANV LIG+E VG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSKTEALGLIETKGLVGAIEAADAMVKAANVYLIGREFVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAA+ VGELISVHVIPRPH++VE+ILP
Sbjct: 61 AGAAAAQRVGELISVHVIPRPHSDVEMILP 90
>gi|37542642|gb|AAL38399.1| GldA [Lactobacillus collinoides]
Length = 97
Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/88 (71%), Positives = 77/88 (87%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALG++ET+GLV +IE ADAMVKAANV L+G+E++G GLVTVMVRGDVGAVKAA DAG
Sbjct: 2 NQEALGLIETKGLVASIEVADAMVKAANVDLVGQEKIGHGLVTVMVRGDVGAVKAAVDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVILP 90
AAEN+GE++S +VIPRPH++VE ILP
Sbjct: 62 VQAAENIGEVLSNYVIPRPHSDVEKILP 89
>gi|106893684|ref|ZP_01360808.1| microcompartments protein [Clostridium sp. OhILAs]
gi|106774904|gb|EAT31464.1| microcompartments protein [Clostridium sp. OhILAs]
Length = 98
Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats.
Identities = 76/86 (88%), Positives = 81/86 (94%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGM+ET+GLVGAIEAADAMVKAANV L+GKEQVG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 4 DALGMIETKGLVGAIEAADAMVKAANVYLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAA 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA+ VGELISVHVIPRPH EVE ILP
Sbjct: 64 AAQRVGELISVHVIPRPHVEVEGILP 89
>gi|78358310|ref|YP_389759.1| ethanolamine utilization protein eutM precursor [Desulfovibrio
desulfuricans G20]
gi|78220715|gb|ABB40064.1| ethanolamine utilization protein eutM precursor [Desulfovibrio
desulfuricans G20]
Length = 92
Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats.
Identities = 75/88 (85%), Positives = 83/88 (94%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLVGA+EAADAMVKAANV LIG+EQVG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 3 NALGMIETKGLVGAVEAADAMVKAANVELIGREQVGGGLVTVMVRGDVGAVKAATDAGAA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQ 92
AA VGEL+SVHVIPRPH+EVE+ILP +
Sbjct: 63 AAGRVGELVSVHVIPRPHSEVELILPKR 90
>gi|120597260|ref|YP_961834.1| microcompartment protein [Shewanella sp. W3-18-1]
gi|120557353|gb|ABM23280.1| microcompartment protein [Shewanella sp. W3-18-1]
Length = 100
Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 76/85 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV LIG E++G+GL+TV+VRGDVGAVKAATDAG A+
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVVLIGYEKIGSGLITVLVRGDVGAVKAATDAGCAS 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +G++I+ HVIPRPH+++E +LP
Sbjct: 65 ARQIGDVIATHVIPRPHSDIEKLLP 89
>gi|19703435|ref|NP_602997.1| Ethanolamine utilization protein eutM precursor [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19713511|gb|AAL94296.1| Ethanolamine utilization protein eutM precursor [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322705|gb|EDK87955.1| possible carbon dioxide-concentrating/carboxysome shell protein
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 94
Score = 102 bits (255), Expect = 6e-21, Method: Composition-based stats.
Identities = 76/90 (84%), Positives = 84/90 (93%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+ NALGM+ET+GLV A+EAADAMVKAANVTL+GKE VG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MSTLNALGMIETKGLVAAVEAADAMVKAANVTLVGKELVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILP 90
AGAAAA+ VGELISVHVIPRPH+EVE+ILP
Sbjct: 61 AGAAAADRVGELISVHVIPRPHSEVELILP 90
>gi|148544947|ref|YP_001272317.1| microcompartments protein [Lactobacillus reuteri F275]
gi|148531981|gb|ABQ83980.1| microcompartments protein [Lactobacillus reuteri F275]
Length = 96
Score = 102 bits (255), Expect = 6e-21, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 76/86 (88%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ETRGLV +IEAAD MVKAANVTL G+E++G+GLVTVM+RGDVGAVKAA DAG
Sbjct: 3 NALGMIETRGLVASIEAADQMVKAANVTLTGQEKIGSGLVTVMIRGDVGAVKAAVDAGVQ 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AAE VGE++S +VIPRPH EVE ILP
Sbjct: 63 AAEGVGEVVSSYVIPRPHEEVEKILP 88
>gi|146291321|ref|YP_001181745.1| microcompartments protein [Shewanella putrefaciens CN-32]
gi|145563011|gb|ABP73946.1| microcompartments protein [Shewanella putrefaciens CN-32]
Length = 100
Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats.
Identities = 61/85 (71%), Positives = 76/85 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV LIG E++G+GL+TV+VRGDVGAVKAATDAG A+
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVVLIGYEKIGSGLITVLVRGDVGAVKAATDAGCAS 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +G++I+ HVIPRPH++VE +LP
Sbjct: 65 ARQIGDVIATHVIPRPHSDVEKLLP 89
>gi|154497249|ref|ZP_02035945.1| hypothetical protein BACCAP_01542 [Bacteroides capillosus ATCC
29799]
gi|150273648|gb|EDN00776.1| hypothetical protein BACCAP_01542 [Bacteroides capillosus ATCC
29799]
Length = 200
Score = 102 bits (253), Expect = 8e-21, Method: Composition-based stats.
Identities = 73/84 (86%), Positives = 75/84 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAMVKAANV L KE VG GLVTVMVRGDVGAVKAATDAGAAA
Sbjct: 3 ALGMIETRGLVAAIEAADAMVKAANVDLQCKEHVGGGLVTVMVRGDVGAVKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVIL 89
AE VGEL+SVHVIPRPH EVE IL
Sbjct: 63 AERVGELLSVHVIPRPHQEVEGIL 86
>gi|153953476|ref|YP_001394241.1| Predicted microcompartment shellprotein [Clostridium kluyveri DSM
555]
gi|146346357|gb|EDK32893.1| Predicted microcompartment shellprotein [Clostridium kluyveri DSM
555]
Length = 92
Score = 102 bits (253), Expect = 8e-21, Method: Composition-based stats.
Identities = 72/85 (84%), Positives = 81/85 (95%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GLVGAIEAAD+MVKAANV LIGKEQ+G+GLVTVMVRGDVGAVKAATDAGAA+
Sbjct: 5 ALGMIETKGLVGAIEAADSMVKAANVQLIGKEQIGSGLVTVMVRGDVGAVKAATDAGAAS 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ VGEL+SVHVIPRPH +VE ILP
Sbjct: 65 AKRVGELVSVHVIPRPHTDVEKILP 89
>gi|86604360|gb|ABD13958.1| propanediol utilization protein [Lactobacillus reuteri]
Length = 92
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/88 (71%), Positives = 79/88 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV +IEAADAMVKAANV LIG+E++G GLVTVMVRGDVGAVKA+ DAG A
Sbjct: 5 ALGLIETKGLVASIEAADAMVKAANVKLIGQEKIGHGLVTVMVRGDVGAVKASVDAGVQA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
AEN+GE++S +VIPRP +EVE +LP++E
Sbjct: 65 AENIGEVVSNYVIPRPQSEVEKLLPNKE 92
>gi|106884891|ref|ZP_01352258.1| microcompartments protein [Clostridium phytofermentans ISDg]
gi|106767657|gb|EAT24369.1| microcompartments protein [Clostridium phytofermentans ISDg]
Length = 94
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/86 (87%), Positives = 83/86 (96%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGM+ET+GLVGAIEAADAMVKAANV+L+GKE VG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 4 DALGMIETKGLVGAIEAADAMVKAANVSLVGKEFVGGGLVTVMVRGDVGAVKAATDAGAA 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA+ VGEL+SVHVIPRPHAEVE+ILP
Sbjct: 64 AAQRVGELVSVHVIPRPHAEVEIILP 89
>gi|18857676|emb|CAD01089.1| PduA protein [Lactobacillus collinoides]
Length = 97
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALG++ET+GL +IEAADAMVK ANV L+G+E++G GLV VMVRGDVGAVKAA DAG
Sbjct: 2 NQEALGLIETKGLGASIEAADAMVKPANVDLVGQEKIGHGLVPVMVRGDVGAVKAAVDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVILP 90
AAEN+GE++S +VIPRPH++VE ILP
Sbjct: 62 VQAAENIGEVLSNYVIPRPHSDVEKILP 89
>gi|134301093|ref|YP_001114589.1| microcompartments protein [Desulfotomaculum reducens MI-1]
gi|134053793|gb|ABO51764.1| microcompartments protein [Desulfotomaculum reducens MI-1]
Length = 95
Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats.
Identities = 72/93 (77%), Positives = 86/93 (92%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M+ ++ALG++ET+GLVG+IEAADAMVKAANV LIG E+VG LVTVMVRGDVGAVKAATD
Sbjct: 1 MSRSDALGLIETKGLVGSIEAADAMVKAANVQLIGYEKVGGALVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
AGAAAA+ VGELISVHVIPRPH++VE+ILP ++
Sbjct: 61 AGAAAAQRVGELISVHVIPRPHSDVEMILPAKK 93
>gi|89893153|ref|YP_516640.1| hypothetical protein DSY0407 [Desulfitobacterium hafniense Y51]
gi|109647534|ref|ZP_01371437.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|89332601|dbj|BAE82196.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109640624|gb|EAT50179.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 96
Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/89 (85%), Positives = 81/89 (91%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALGMVET+GLVGAIEAADAMVKAANV LIGK VG GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 4 DALGMVETKGLVGAIEAADAMVKAANVHLIGKVLVGGGLVTVMVRGDVGAVKAATDAGAA 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQE 93
AA+ VGEL SVHVIPRPH EVE+ILPH +
Sbjct: 64 AAQRVGELKSVHVIPRPHTEVEMILPHDD 92
>gi|16800192|ref|NP_470460.1| hypothetical protein lin1123 [Listeria innocua Clip11262]
gi|46907377|ref|YP_013766.1| propanediol utilization protein PduJ, putative [Listeria
monocytogenes str. 4b F2365]
gi|47091959|ref|ZP_00229753.1| propanediol utilization protein PduJ, putative [Listeria
monocytogenes str. 4b H7858]
gi|47095000|ref|ZP_00232613.1| propanediol utilization protein PduJ, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|116872533|ref|YP_849314.1| propanediol utilization protein PduA, putative [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|153166500|ref|ZP_01927057.1| hypothetical protein LMHG_02675 [Listeria monocytogenes FSL
N1-017]
gi|153174227|ref|ZP_01929766.1| hypothetical protein LMIG_02479 [Listeria monocytogenes FSL
N3-165]
gi|153179247|ref|ZP_01932466.1| hypothetical protein LMMG_00114 [Listeria monocytogenes F6900]
gi|153184678|ref|ZP_01935405.1| hypothetical protein LMOG_01315 [Listeria monocytogenes J0161]
gi|153190542|ref|ZP_01937931.1| hypothetical protein LMPG_01100 [Listeria monocytogenes J2818]
gi|153201870|ref|ZP_01943627.1| hypothetical protein LMSG_01283 [Listeria monocytogenes HPB2262]
gi|16413582|emb|CAC96354.1| lin1123 [Listeria innocua]
gi|46880644|gb|AAT03943.1| putative propanediol utilization protein PduJ [Listeria
monocytogenes str. 4b F2365]
gi|47016618|gb|EAL07538.1| propanediol utilization protein PduJ, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|47019675|gb|EAL10414.1| propanediol utilization protein PduJ, putative [Listeria
monocytogenes str. 4b H7858]
gi|116741411|emb|CAK20535.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|126942649|gb|EBA20386.1| hypothetical protein LMOG_01315 [Listeria monocytogenes J0161]
gi|127765924|gb|EBA26268.1| hypothetical protein LMPG_01100 [Listeria monocytogenes J2818]
gi|133727544|gb|EBA29242.1| hypothetical protein LMHG_02675 [Listeria monocytogenes FSL
N1-017]
gi|133730425|gb|EBA32123.1| hypothetical protein LMIG_02479 [Listeria monocytogenes FSL
N3-165]
gi|133732732|gb|EBA34430.1| hypothetical protein LMMG_00114 [Listeria monocytogenes F6900]
gi|133735659|gb|EBA37357.1| hypothetical protein LMSG_01283 [Listeria monocytogenes HPB2262]
Length = 91
Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats.
Identities = 70/86 (81%), Positives = 81/86 (94%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLVGAIEAADAMVKAANV+L+G E++G+GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 3 NALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA NVGE+ S+HVIPRPH +VE +LP
Sbjct: 63 AARNVGEVQSIHVIPRPHNDVETLLP 88
>gi|86604344|gb|ABD13950.1| propanediol utilization protein [Lactobacillus reuteri]
Length = 95
Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/86 (75%), Positives = 76/86 (88%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLV +IEAAD MVKAANVTL G+E++G+GLVTVM+RGDVGAVKAA DAG
Sbjct: 3 NALGMIETKGLVASIEAADQMVKAANVTLTGQEKIGSGLVTVMIRGDVGAVKAAVDAGVQ 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AAE VGE++S +VIPRPH EVE ILP
Sbjct: 63 AAEGVGEVVSSYVIPRPHEEVEKILP 88
>gi|111075052|gb|ABH04896.1| ethanolamine utilization protein eutM [Heliobacillus mobilis]
Length = 93
Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/88 (81%), Positives = 80/88 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVE +GLVGAIEAADAMVKAANV LIG E++G+GLVTV+VRGDVGAVKAATD+GAAA
Sbjct: 5 ALGMVECKGLVGAIEAADAMVKAANVNLIGYEKIGSGLVTVLVRGDVGAVKAATDSGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
A+ VGELISVHVIPRPH +VE ILP E
Sbjct: 65 AQKVGELISVHVIPRPHMDVEKILPKLE 92
>gi|148544955|ref|YP_001272325.1| microcompartments protein [Lactobacillus reuteri F275]
gi|148531989|gb|ABQ83988.1| microcompartments protein [Lactobacillus reuteri F275]
Length = 93
Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/87 (71%), Positives = 76/87 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET GLV +IEAADAMVKAANV LIG+E++G GLVTVMVRGDVGAVKA+ DAG A
Sbjct: 5 ALGLIETEGLVASIEAADAMVKAANVKLIGQEKIGHGLVTVMVRGDVGAVKASVDAGVQA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQ 92
AEN+GE++S +VIPRP +EV+ +LPH
Sbjct: 65 AENIGEVVSSYVIPRPQSEVDKLLPHH 91
>gi|153195934|ref|ZP_01940342.1| hypothetical protein LMRG_00602 [Listeria monocytogenes 10403S]
gi|127634216|gb|EBA23602.1| hypothetical protein LMRG_00602 [Listeria monocytogenes 10403S]
Length = 91
Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats.
Identities = 70/86 (81%), Positives = 81/86 (94%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLVGAIEAADAMVKAANV+L+G E++G+GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 3 NALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA NVGE+ S+HVIPRPH +VE +LP
Sbjct: 63 AAGNVGEVQSIHVIPRPHNDVETLLP 88
>gi|106885190|ref|ZP_01352554.1| microcompartments protein [Clostridium phytofermentans ISDg]
gi|106767362|gb|EAT24077.1| microcompartments protein [Clostridium phytofermentans ISDg]
Length = 164
Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats.
Identities = 63/85 (74%), Positives = 78/85 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV A+EAADAM+KAANVTL+G E++G+GLV+VMVRGDVGAVKAA +AGAA+
Sbjct: 77 ALGMIETRGLVAAVEAADAMLKAANVTLVGTEKIGSGLVSVMVRGDVGAVKAAVEAGAAS 136
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH++VE ILP
Sbjct: 137 AGRLGELVATHVIPRPHSDVEKILP 161
>gi|118443961|ref|YP_878965.1| microcompartment protein [Clostridium novyi NT]
gi|118134417|gb|ABK61461.1| microcompartment protein [Clostridium novyi NT]
Length = 93
Score = 99.8 bits (247), Expect = 5e-20, Method: Composition-based stats.
Identities = 69/85 (81%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GLVGAIEAAD+MVKAANV LIG E++G+GLVTVMVRGDVGAVKAATDAG AA
Sbjct: 5 ALGMIETKGLVGAIEAADSMVKAANVALIGYEKIGSGLVTVMVRGDVGAVKAATDAGCAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ VGE++SVHVIPRPH +VE ILP
Sbjct: 65 AKRVGEVVSVHVIPRPHTDVEKILP 89
>gi|154497264|ref|ZP_02035960.1| hypothetical protein BACCAP_01557 [Bacteroides capillosus ATCC
29799]
gi|150273663|gb|EDN00791.1| hypothetical protein BACCAP_01557 [Bacteroides capillosus ATCC
29799]
Length = 95
Score = 99.0 bits (245), Expect = 7e-20, Method: Composition-based stats.
Identities = 76/93 (81%), Positives = 81/93 (87%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MA + ALGM+ET+GLV ++EAADAMVKAANVTLIGK VG GLVTVMVRGDVGAVKAATD
Sbjct: 1 MAYSQALGMIETKGLVASVEAADAMVKAANVTLIGKVHVGGGLVTVMVRGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPHQE 93
AGAAAAE VGEL SVHVIPRPH EVE ILP E
Sbjct: 61 AGAAAAERVGELCSVHVIPRPHEEVESILPAAE 93
>gi|83592244|ref|YP_425996.1| microcompartments protein [Rhodospirillum rubrum ATCC 11170]
gi|83575158|gb|ABC21709.1| microcompartments protein [Rhodospirillum rubrum ATCC 11170]
Length = 92
Score = 99.0 bits (245), Expect = 8e-20, Method: Composition-based stats.
Identities = 66/89 (74%), Positives = 79/89 (88%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
+ ALGMVET+GL+G+IEAADAM K+ANVTLIG E++G+GLVT +VRGDVGAVKAA DAG
Sbjct: 2 SGEALGMVETKGLIGSIEAADAMTKSANVTLIGYEKIGSGLVTTLVRGDVGAVKAAVDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVILPH 91
AAAAE VG L+S H+IPRPH++VE ILPH
Sbjct: 62 AAAAEKVGTLVSKHIIPRPHSDVERILPH 90
>gi|154497251|ref|ZP_02035947.1| hypothetical protein BACCAP_01544 [Bacteroides capillosus ATCC
29799]
gi|150273650|gb|EDN00778.1| hypothetical protein BACCAP_01544 [Bacteroides capillosus ATCC
29799]
Length = 95
Score = 99.0 bits (245), Expect = 8e-20, Method: Composition-based stats.
Identities = 74/85 (87%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GLV ++EAADAMVKAANVTLIGKE VG GLVTVMVRGDVGAVKAATDAGAAA
Sbjct: 7 ALGMIETKGLVASVEAADAMVKAANVTLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAA 66
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE VGEL+SVHVIPRPH EVE ILP
Sbjct: 67 AERVGELVSVHVIPRPHEEVESILP 91
>gi|90422680|ref|YP_531050.1| microcompartments protein [Rhodopseudomonas palustris BisB18]
gi|90104694|gb|ABD86731.1| microcompartments protein [Rhodopseudomonas palustris BisB18]
Length = 93
Score = 99.0 bits (245), Expect = 8e-20, Method: Composition-based stats.
Identities = 68/91 (74%), Positives = 80/91 (87%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M + ALGMVET+GL+G+IEAADAM K+ANVTLIG E++G+GLVT +VRGDVGAVKAA D
Sbjct: 1 MMSGEALGMVETKGLIGSIEAADAMTKSANVTLIGYEKIGSGLVTTLVRGDVGAVKAAVD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVILPH 91
AGAAAAE VG +IS H+IPRPHA+VE ILPH
Sbjct: 61 AGAAAAEKVGTVISKHIIPRPHADVEKILPH 91
>gi|154497252|ref|ZP_02035948.1| hypothetical protein BACCAP_01545 [Bacteroides capillosus ATCC
29799]
gi|150273651|gb|EDN00779.1| hypothetical protein BACCAP_01545 [Bacteroides capillosus ATCC
29799]
Length = 94
Score = 98.6 bits (244), Expect = 9e-20, Method: Composition-based stats.
Identities = 74/85 (87%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GLV ++EAADAMVKAANVTLIGKE VG GLVTVMVRGDVGAVKAATDAGAAA
Sbjct: 7 ALGMIETKGLVASVEAADAMVKAANVTLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAA 66
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE VGEL+SVHVIPRPH EVE ILP
Sbjct: 67 AERVGELVSVHVIPRPHNEVESILP 91
>gi|150018870|ref|YP_001311124.1| microcompartments protein [Clostridium beijerinckii NCIMB 8052]
gi|149905335|gb|ABR36168.1| microcompartments protein [Clostridium beijerinckii NCIMB 8052]
Length = 92
Score = 98.6 bits (244), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/88 (78%), Positives = 80/88 (90%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N++ALGMVET+GLV AIEAADAMVKAANV LIG E++G+GLVTVMVRGDVGAVKAATDAG
Sbjct: 2 NSDALGMVETKGLVAAIEAADAMVKAANVNLIGYEKIGSGLVTVMVRGDVGAVKAATDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVILP 90
AA+A VGE++S+HVIPRPH + E ILP
Sbjct: 62 AASARLVGEVVSIHVIPRPHMDTEKILP 89
>gi|29335727|emb|CAD83146.1| PduJ protein [Lactobacillus collinoides]
Length = 94
Score = 98.6 bits (244), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/87 (72%), Positives = 77/87 (88%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLV +IEAADAMVKAANV ++G+ ++G+GLVTVMVRGDVGAVKA+ DAG
Sbjct: 3 NALGMIETKGLVASIEAADAMVKAANVVMVGQAKIGSGLVTVMVRGDVGAVKASVDAGVQ 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILPH 91
AAEN+GE+++ VIPRPHAEVE ILP
Sbjct: 63 AAENIGEVLTSFVIPRPHAEVENILPQ 89
>gi|16803199|ref|NP_464684.1| hypothetical protein lmo1159 [Listeria monocytogenes EGD-e]
gi|16410575|emb|CAC99237.1| lmo1159 [Listeria monocytogenes]
Length = 91
Score = 98.6 bits (244), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/85 (81%), Positives = 80/85 (94%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLVGAIEAADAMVKAANV+L+G E++G+GLVTVMVRGDVGAVKAATDAGAA
Sbjct: 3 NALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVIL 89
AA NVGE+ S+HVIPRPH +VE +L
Sbjct: 63 AARNVGEVQSIHVIPRPHNDVETLL 87
>gi|124263038|ref|YP_001023508.1| putative carboxysome structural-like protein [Methylibium
petroleiphilum PM1]
gi|124262284|gb|ABM97273.1| putative carboxysome structural-like protein [Methylibium
petroleiphilum PM1]
Length = 105
Score = 98.2 bits (243), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/85 (81%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLVGAIEAADAMVKAANV L+G+EQ+G GLVTVMVRGDVGAVKAATDAGAAA
Sbjct: 18 ALGLIETKGLVGAIEAADAMVKAANVRLVGREQIGGGLVTVMVRGDVGAVKAATDAGAAA 77
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GE++SVHVIPRPH +VE ILP
Sbjct: 78 AGKIGEIVSVHVIPRPHEDVEGILP 102
>gi|153953697|ref|YP_001394462.1| Predicted microcompartment protein [Clostridium kluyveri DSM 555]
gi|146346578|gb|EDK33114.1| Predicted microcompartment protein [Clostridium kluyveri DSM 555]
Length = 92
Score = 97.8 bits (242), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/86 (81%), Positives = 81/86 (94%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GLVGAIEAAD+MVKAANV LIG E++G+GLVTVMVRGDVGAVKAATDAGAA+
Sbjct: 5 ALGMIETKGLVGAIEAADSMVKAANVALIGYEKIGSGLVTVMVRGDVGAVKAATDAGAAS 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPH 91
A+ VGE+ISVHVIPRPH +VE ILP+
Sbjct: 65 AKRVGEVISVHVIPRPHTDVEKILPN 90
>gi|116872525|ref|YP_849306.1| propanediol utilization protein PduA, putative [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116741403|emb|CAK20527.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 95
Score = 97.8 bits (242), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLVGAIEAADAMVK+ANVTL G E++G+GLVTVMVRGDVGAVKAAT+AGAAA
Sbjct: 4 ALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVG ++S HVIPRPH EVE ILP
Sbjct: 64 ARNVGTVMSTHVIPRPHTEVEEILP 88
>gi|16803191|ref|NP_464676.1| hypothetical protein lmo1151 [Listeria monocytogenes EGD-e]
gi|153174219|ref|ZP_01929758.1| propanediol utilization protein PduA [Listeria monocytogenes FSL
N3-165]
gi|16410567|emb|CAC99229.1| lmo1151 [Listeria monocytogenes]
gi|133730417|gb|EBA32115.1| propanediol utilization protein PduA [Listeria monocytogenes FSL
N3-165]
Length = 95
Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/85 (80%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLVGAIEAADAMVK+ANVTL G E++G+GLVTVMVRGDVGAVKAAT+AGAAA
Sbjct: 4 ALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+NVG ++S HVIPRPH +VE ILP
Sbjct: 64 AKNVGTVMSTHVIPRPHTDVEEILP 88
>gi|46907369|ref|YP_013758.1| propanediol utilization protein PduA [Listeria monocytogenes str.
4b F2365]
gi|47091951|ref|ZP_00229745.1| propanediol utilization protein PduA [Listeria monocytogenes str.
4b H7858]
gi|153166492|ref|ZP_01927049.1| propanediol utilization protein PduA [Listeria monocytogenes FSL
N1-017]
gi|153195926|ref|ZP_01940334.1| propanediol utilization protein PduA [Listeria monocytogenes
10403S]
gi|153201862|ref|ZP_01943619.1| propanediol utilization protein PduA [Listeria monocytogenes
HPB2262]
gi|46880636|gb|AAT03935.1| propanediol utilization protein PduA [Listeria monocytogenes str.
4b F2365]
gi|47019667|gb|EAL10406.1| propanediol utilization protein PduA [Listeria monocytogenes str.
4b H7858]
gi|127634208|gb|EBA23594.1| propanediol utilization protein PduA [Listeria monocytogenes
10403S]
gi|133727536|gb|EBA29234.1| propanediol utilization protein PduA [Listeria monocytogenes FSL
N1-017]
gi|133735651|gb|EBA37349.1| propanediol utilization protein PduA [Listeria monocytogenes
HPB2262]
Length = 95
Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/85 (80%), Positives = 78/85 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLVGAIEAADAMVK+ANVTL G E++G+GLVTVMVRGDVGAVKAAT+AGAAA
Sbjct: 4 ALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVG ++S HVIPRPH +VE ILP
Sbjct: 64 ARNVGTVMSTHVIPRPHTDVEEILP 88
>gi|83586696|ref|ZP_00925328.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli 101-1]
gi|117626449|ref|YP_859772.1| putative propanediol utilization protein PduA [Escherichia coli
APEC O1]
gi|115515573|gb|ABJ03648.1| putative propanediol utilization protein PduA [Escherichia coli
APEC O1]
Length = 93
Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/85 (82%), Positives = 78/85 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GLV AIEAAD MVK+ANVTL+G E++G+GLVTVMVRGDVGAVKAATDAG+AA
Sbjct: 5 ALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A VGEL+SVHVIPRPH EVE ILP
Sbjct: 65 ASKVGELVSVHVIPRPHIEVEKILP 89
>gi|28211119|ref|NP_782063.1| carbon dioxide concentrating mechanism protein ccmK homolog
[Clostridium tetani E88]
gi|28203559|gb|AAO36000.1| carbon dioxide concentrating mechanism protein ccmK-like protein
[Clostridium tetani E88]
Length = 229
Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL+ A+EAAD MVK+A+V++I K VG GLVT+ V GDVGAVKA+ +AGAAA
Sbjct: 3 ALGLIETKGLLAAVEAADVMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASIEAGAAA 62
Query: 66 AENVGE--LISVHVIPRPHAEVEVIL 89
+N+ E L+S HVIPRPH E+E I+
Sbjct: 63 VKNLNEEFLVSEHVIPRPHEELESII 88
>gi|153809708|ref|ZP_01962376.1| hypothetical protein RUMOBE_00089 [Ruminococcus obeum ATCC 29174]
gi|149833886|gb|EDM88966.1| hypothetical protein RUMOBE_00089 [Ruminococcus obeum ATCC 29174]
Length = 92
Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/85 (71%), Positives = 73/85 (85%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVETRGL AIEAAD M KAANV L+G E++G+GLVTVMVRGDVGAVK+A ++G+AA
Sbjct: 5 ALGMVETRGLTAAIEAADQMCKAANVALVGTEKIGSGLVTVMVRGDVGAVKSAVESGSAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH +VE ILP
Sbjct: 65 ASRLGELVATHVIPRPHTDVEKILP 89
>gi|148322266|gb|EDK87516.1| possible carbon dioxide-concentrating/carboxysome shell protein
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 92
Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/87 (77%), Positives = 78/87 (89%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+NALGM+ET+GLVGAIEAADAM K+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAGA
Sbjct: 2 SNALGMIETKGLVGAIEAADAMTKSANVELVGYEKIGSGLVTVMVRGDVGAVKAAVDAGA 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVILP 90
AAAE VGE+ SVHVIPRPH + E +LP
Sbjct: 62 AAAERVGEVKSVHVIPRPHTDTEKLLP 88
>gi|47094992|ref|ZP_00232605.1| propanediol utilization protein PduA [Listeria monocytogenes str.
1/2a F6854]
gi|153179239|ref|ZP_01932458.1| propanediol utilization protein PduA [Listeria monocytogenes
F6900]
gi|153184686|ref|ZP_01935413.1| propanediol utilization protein PduA [Listeria monocytogenes
J0161]
gi|153190534|ref|ZP_01937923.1| propanediol utilization protein PduA [Listeria monocytogenes
J2818]
gi|47016610|gb|EAL07530.1| propanediol utilization protein PduA [Listeria monocytogenes str.
1/2a F6854]
gi|126942657|gb|EBA20394.1| propanediol utilization protein PduA [Listeria monocytogenes
J0161]
gi|127765916|gb|EBA26260.1| propanediol utilization protein PduA [Listeria monocytogenes
J2818]
gi|133732724|gb|EBA34422.1| propanediol utilization protein PduA [Listeria monocytogenes
F6900]
Length = 95
Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats.
Identities = 68/85 (80%), Positives = 79/85 (92%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLVGAIEAADAMVK+ANVTL G E++G+GLVTVMVRGDVGAVKAAT+AGAAA
Sbjct: 4 ALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+NVG ++S HVIPRPH +VE ILP
Sbjct: 64 AKNVGTVMSTHVIPRPHTDVEEILP 88
>gi|154503203|ref|ZP_02040263.1| hypothetical protein RUMGNA_01027 [Ruminococcus gnavus ATCC 29149]
gi|153796197|gb|EDN78617.1| hypothetical protein RUMGNA_01027 [Ruminococcus gnavus ATCC 29149]
Length = 151
Score = 96.7 bits (239), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/85 (71%), Positives = 74/85 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVETRGLV +IEAAD M+KAANV L+G E++G+GLVTVMVRGDVGAVK+A ++GA A
Sbjct: 64 ALGMVETRGLVASIEAADTMLKAANVVLVGTEKIGSGLVTVMVRGDVGAVKSAVESGAEA 123
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH +VE ILP
Sbjct: 124 AGRLGELVATHVIPRPHTDVEKILP 148
>gi|116334198|ref|YP_795725.1| Propanediol utilization protein [Lactobacillus brevis ATCC 367]
gi|116099545|gb|ABJ64694.1| Propanediol utilization protein [Lactobacillus brevis ATCC 367]
Length = 92
Score = 96.3 bits (238), Expect = 5e-19, Method: Composition-based stats.
Identities = 63/88 (71%), Positives = 77/88 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV AIEAADAMVKAANV L+G+E++G GLVT MVRGDVGAVKAA DAG A
Sbjct: 5 ALGLIETKGLVAAIEAADAMVKAANVDLVGQEKIGHGLVTTMVRGDVGAVKAAVDAGVAG 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
AEN+GE++S +VIPRPH +VE ILP ++
Sbjct: 65 AENIGEVLSSYVIPRPHTDVEKILPQKK 92
>gi|16800184|ref|NP_470452.1| hypothetical protein lin1115 [Listeria innocua Clip11262]
gi|16413574|emb|CAC96346.1| lin1115 [Listeria innocua]
Length = 95
Score = 96.3 bits (238), Expect = 5e-19, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 76/85 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLV AIEAADAMVK+ANVTL G E++G+GLVTVMVRGDVGAVKAATDAGA A
Sbjct: 4 ALGLVETKGLVSAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATDAGAEA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVG ++S HVIPRPH +VE ILP
Sbjct: 64 ARNVGTVMSTHVIPRPHTDVEEILP 88
>gi|77959324|ref|ZP_00823345.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia bercovieri ATCC 43970]
Length = 104
Score = 95.5 bits (236), Expect = 8e-19, Method: Composition-based stats.
Identities = 64/85 (75%), Positives = 74/85 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAAD MVK+ANVTL+G E++G+GLVTV+VRGDVGAVKAATDAGA+A
Sbjct: 5 ALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGASA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A VGE+ S HVIPRPH +VE LP
Sbjct: 65 AAKVGEVRSTHVIPRPHTDVEAFLP 89
>gi|77975826|ref|ZP_00831360.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia frederiksenii ATCC 33641]
Length = 93
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 65/85 (76%), Positives = 74/85 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAAD MVK+ANVTL+G E++G+GLVTV+VRGDVGAVKAATDAGA A
Sbjct: 5 ALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAIA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ S HVIPRPH +VE LP
Sbjct: 65 AANVGEVKSTHVIPRPHTDVEKFLP 89
>gi|152971729|ref|YP_001336838.1| Propanediol utilization: polyhedral bodies [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150956578|gb|ABR78608.1| Propanediol utilization: polyhedral bodies [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 91
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLVGAIEAADAMVK+ANV LIG E++G+GL+TVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASVVGEVKSSHVIPRPHSDVEAILP 88
>gi|16760978|ref|NP_456595.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16765375|ref|NP_460990.1| polyhedral body protein [Salmonella typhimurium LT2]
gi|29141326|ref|NP_804668.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|56413053|ref|YP_150128.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|5069453|gb|AAD39009.1| PduJ [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420575|gb|AAL20949.1| propanediol utilization protein [Salmonella typhimurium LT2]
gi|16503276|emb|CAD02406.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136953|gb|AAO68517.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|56127310|gb|AAV76816.1| putative propanediol utilization protein PduJ [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 91
Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLVGAIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASVVGEVKSCHVIPRPHSDVEAILP 88
>gi|111075049|gb|ABH04894.1| ethanolamine utilization protein eutM [Heliobacillus mobilis]
Length = 91
Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/87 (77%), Positives = 80/87 (91%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ ALGMVET+GLVGAIEAADAMVKAANV L+G E++G+GLVTV+VRGDVGA+KAATDAGA
Sbjct: 2 SEALGMVETKGLVGAIEAADAMVKAANVELVGYEKIGSGLVTVLVRGDVGAIKAATDAGA 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVILP 90
AAA VGE++S+HVIPRPH +VE +LP
Sbjct: 62 AAARKVGEVVSIHVIPRPHVDVEKMLP 88
>gi|83592241|ref|YP_425993.1| microcompartments protein [Rhodospirillum rubrum ATCC 11170]
gi|83575155|gb|ABC21706.1| microcompartments protein [Rhodospirillum rubrum ATCC 11170]
Length = 98
Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GLVGAIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAATDAGA A
Sbjct: 5 ALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDAGAVA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GE++SVHVIPRPH EVE ILP
Sbjct: 65 ASKIGEVVSVHVIPRPHTEVEKILP 89
>gi|90414630|ref|ZP_01222602.1| probable ethanolamine utilization protein (EutM) [Photobacterium
profundum 3TCK]
gi|90324263|gb|EAS40835.1| probable ethanolamine utilization protein (EutM) [Photobacterium
profundum 3TCK]
Length = 91
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/86 (58%), Positives = 71/86 (82%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALG++ET+GL IEA+DAMVKAA V L+G +Q+G+G VT ++RGDV + KAATDAG+
Sbjct: 2 DALGILETKGLTALIEASDAMVKAARVELVGYQQIGSGYVTALIRGDVASCKAATDAGSV 61
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL++VHVIPRPH+++E + P
Sbjct: 62 VAQRLGELVAVHVIPRPHSDLEKVFP 87
>gi|77962422|ref|ZP_00826242.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia mollaretii ATCC 43969]
Length = 106
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/85 (75%), Positives = 74/85 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAAD MVK+ANVTL+G E++G+GLVTV+VRGDVGAVKAATDAGA+A
Sbjct: 12 ALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGASA 71
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A VGE+ S HVIPRPH +VE LP
Sbjct: 72 AAKVGEVKSTHVIPRPHTDVEAFLP 96
>gi|116619522|ref|YP_821678.1| microcompartments protein [Solibacter usitatus Ellin6076]
gi|116222684|gb|ABJ81393.1| microcompartments protein [Solibacter usitatus Ellin6076]
Length = 93
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/85 (84%), Positives = 75/85 (88%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GL GAIEAADAMVK ANV LIGKE VGAGLV V VRGDVGAVKAATDAGAAA
Sbjct: 3 ALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A VGEL+SVHVIPRPH EVE ILP
Sbjct: 63 ARRVGELVSVHVIPRPHEEVEKILP 87
>gi|31324745|gb|AAP48665.1| PduJ [uncultured bacterium]
Length = 91
Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLVGAIEAADAMVK+ANV LIG E++G+GL+TVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASAVGEVKSCHVIPRPHSDVEAILP 88
>gi|150018860|ref|YP_001311114.1| microcompartments protein [Clostridium beijerinckii NCIMB 8052]
gi|149905325|gb|ABR36158.1| microcompartments protein [Clostridium beijerinckii NCIMB 8052]
Length = 92
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALGMVET+GLV AIEAADAM KAANV L+G E++G+GLVTVMVRGDVGAVKAA DAG
Sbjct: 2 NNEALGMVETKGLVSAIEAADAMTKAANVMLVGYEKIGSGLVTVMVRGDVGAVKAAVDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVILP 90
AAA NVGE+IS HVIPRPH + E ILP
Sbjct: 62 VAAARNVGEVISQHVIPRPHIDTEKILP 89
>gi|106893960|ref|ZP_01361083.1| microcompartments protein [Clostridium sp. OhILAs]
gi|106774761|gb|EAT31322.1| microcompartments protein [Clostridium sp. OhILAs]
Length = 91
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/86 (81%), Positives = 78/86 (90%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ ALGMVET+GLVGA+EAADAMVKAANVTL+G E++G GLVTVMVRGDVGAVKAATDAGA
Sbjct: 2 SQALGMVETKGLVGAVEAADAMVKAANVTLVGYEKIGFGLVTVMVRGDVGAVKAATDAGA 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
AA VGEL SVHVIPRPH+EVE +L
Sbjct: 62 EAARAVGELHSVHVIPRPHSEVERVL 87
>gi|150392258|ref|YP_001322307.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149952120|gb|ABR50648.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 92
Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats.
Identities = 69/86 (80%), Positives = 76/86 (88%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ ALGMVET+GLVGA+EAADAMVKAANVTL+G E++G GLVTVMVRGDVGAVKAA DAGA
Sbjct: 3 SQALGMVETKGLVGAVEAADAMVKAANVTLVGYEKIGFGLVTVMVRGDVGAVKAAVDAGA 62
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
AA VGEL SVHVIPRPH EVE +L
Sbjct: 63 EAARAVGELHSVHVIPRPHTEVERVL 88
>gi|83596374|gb|ABC25531.1| PduJ [Roseburia inulinivorans]
Length = 93
Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/85 (71%), Positives = 73/85 (85%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGL AIEAADAM KAA V L+G E++G+GLVTVMVRGDVGAVKAA +AG +A
Sbjct: 5 ALGMIETRGLTAAIEAADAMTKAAEVALVGTEKIGSGLVTVMVRGDVGAVKAAVEAGTSA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH++VE ILP
Sbjct: 65 ASKLGELVATHVIPRPHSDVEKILP 89
>gi|153940450|ref|YP_001391403.1| putative carbon dioxide concentrating mechanism protein CcmK-like
protein [Clostridium botulinum F str. Langeland]
gi|152936346|gb|ABS41844.1| putative carbon dioxide concentrating mechanism protein CcmK-like
protein [Clostridium botulinum F str. Langeland]
Length = 294
Score = 93.6 bits (231), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL+ A+EAAD MVK+A+V++I K VG GLVT+ V GDVGAVKA+ +AG AA
Sbjct: 3 ALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGVAA 62
Query: 66 AENVGE--LISVHVIPRPHAEVEVIL 89
+ + E LIS HVIPRPH E+E I+
Sbjct: 63 VKKLDEKFLISEHVIPRPHEELESII 88
>gi|74312537|ref|YP_310956.1| putative propanediol utilization protein: polyhedral bodies
[Shigella sonnei Ss046]
gi|75186803|ref|ZP_00700070.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli E24377A]
gi|73856014|gb|AAZ88721.1| putative propanediol utilization protein: polyhedral bodies
[Shigella sonnei Ss046]
gi|92110350|emb|CAJ87619.1| putative propanediol utilization protein PduJ [Escherichia coli]
gi|157081475|gb|ABV21183.1| propanediol utilization protein PduJ [Escherichia coli E24377A]
Length = 91
Score = 93.6 bits (231), Expect = 3e-18, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLVGAIEAADAMVK+ANV L+G E++G+GL+TVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASAVGEVKSCHVIPRPHSDVEAILP 88
>gi|77977314|ref|ZP_00832766.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia intermedia ATCC 29909]
Length = 93
Score = 93.6 bits (231), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/85 (75%), Positives = 74/85 (87%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAAD MVK+ANVTL+G E++G+GLVTV+VRGDVGAVKAATDAGA+A
Sbjct: 5 ALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGASA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A VGE+ S HVIPRPH +VE LP
Sbjct: 65 AAKVGEVKSTHVIPRPHTDVEKFLP 89
>gi|89893154|ref|YP_516641.1| hypothetical protein DSY0408 [Desulfitobacterium hafniense Y51]
gi|109647533|ref|ZP_01371436.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|89332602|dbj|BAE82197.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109640623|gb|EAT50178.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 92
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/85 (84%), Positives = 77/85 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+GL+GAIEAADAMVKAANV LIG VG GLV VMVRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMIETKGLIGAIEAADAMVKAANVHLIGNVLVGGGLVAVMVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ VGELISVHVIPRPH EVE+ILP
Sbjct: 65 AQRVGELISVHVIPRPHGEVEMILP 89
>gi|16761382|ref|NP_456999.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29140921|ref|NP_804263.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|25512513|pir||AE0814 probable ethanolamine utilization protein EutN eutN [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16503681|emb|CAD07695.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136546|gb|AAO68112.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
Length = 229
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAMVKAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 3 ALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 63 AQRIGELVSVHVIPRPHGDLEEVFP 87
>gi|157082265|gb|ABV11943.1| hypothetical protein CKO_00791 [Citrobacter koseri ATCC BAA-895]
Length = 91
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLVGAIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASAVGEVKSCHVIPRPHSDVEAILP 88
>gi|62180623|ref|YP_217040.1| Propanediol utilization: polyhedral bodies [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|62128256|gb|AAX65959.1| Propanediol utilization: polyhedral bodies [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
Length = 91
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 77/86 (89%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NA G+VET+GLVGAIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NAQGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASVVGEVKSCHVIPRPHSDVEAILP 88
>gi|75186796|ref|ZP_00700063.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli E24377A]
gi|157080351|gb|ABV20059.1| propanediol utilization protein PduA [Escherichia coli E24377A]
Length = 94
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 66/85 (77%), Positives = 76/85 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGA A
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAVA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ +VHVIPRPH +VE ILP
Sbjct: 65 ARNVGEVKAVHVIPRPHTDVEKILP 89
>gi|92110343|emb|CAJ87612.1| putative propanediol utilization protein PduA [Escherichia coli]
Length = 94
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 77/85 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ +VHVIPRPH +VE ILP
Sbjct: 65 ARNVGEVKAVHVIPRPHTDVEKILP 89
>gi|153809710|ref|ZP_01962378.1| hypothetical protein RUMOBE_00091 [Ruminococcus obeum ATCC 29174]
gi|149833888|gb|EDM88968.1| hypothetical protein RUMOBE_00091 [Ruminococcus obeum ATCC 29174]
Length = 98
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 62/85 (72%), Positives = 73/85 (85%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVETRGL AIEAADAM KAA V L+G E++G+GLVTVMVRGDVGAVKAA ++G+AA
Sbjct: 12 ALGMVETRGLTAAIEAADAMTKAAEVALVGTEKIGSGLVTVMVRGDVGAVKAAVESGSAA 71
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH +VE ILP
Sbjct: 72 ASRLGELVATHVIPRPHTDVEKILP 96
>gi|114844381|ref|ZP_01454831.1| microcompartments protein [Thermoanaerobacter ethanolicus X514]
gi|114805584|gb|EAU57375.1| microcompartments protein [Thermoanaerobacter ethanolicus X514]
Length = 93
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/88 (81%), Positives = 79/88 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVETRGLV AIEAADAMVKAANV L+G E++G+GLVTVMVRGDVGA KAATDAGAAA
Sbjct: 5 ALGMVETRGLVPAIEAADAMVKAANVKLVGYEKIGSGLVTVMVRGDVGATKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
A VGE++SVHVIPRPHA+VE ILP E
Sbjct: 65 ARKVGEVVSVHVIPRPHADVEKILPKAE 92
>gi|126651152|ref|ZP_01723362.1| hypothetical protein BB14905_00780 [Bacillus sp. B14905]
gi|126591990|gb|EAZ86056.1| hypothetical protein BB14905_00780 [Bacillus sp. B14905]
Length = 92
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/90 (77%), Positives = 80/90 (88%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ ALGMVET+GLVGAIEA DAMVKAA+V L+GK VG G+VTV+VRGDVGAVKAATDAGA
Sbjct: 2 STALGMVETKGLVGAIEAGDAMVKAASVNLVGKVHVGGGIVTVLVRGDVGAVKAATDAGA 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVILPHQE 93
AAA+ VGEL+SVHVIPRPH E+E+ILP E
Sbjct: 62 AAAQRVGELLSVHVIPRPHHELEMILPKAE 91
>gi|74312530|ref|YP_310949.1| putative propanediol utilization protein: polyhedral bodies
[Shigella sonnei Ss046]
gi|73856007|gb|AAZ88714.1| putative propanediol utilization protein: polyhedral bodies
[Shigella sonnei Ss046]
Length = 94
Score = 92.8 bits (229), Expect = 5e-18, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 77/85 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ +VHVIPRPH +VE ILP
Sbjct: 65 AHNVGEVKAVHVIPRPHTDVEKILP 89
>gi|77959317|ref|ZP_00823338.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia bercovieri ATCC 43970]
Length = 91
Score = 92.8 bits (229), Expect = 5e-18, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 77/86 (89%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG++ET+GLV AIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLIETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGEL S HVIPRPH++VE ILP
Sbjct: 63 AASAVGELTSCHVIPRPHSDVEAILP 88
>gi|150391552|ref|YP_001321601.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149951414|gb|ABR49942.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 199
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/90 (60%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL+ AIE+ADAM+KAANV L+ K +VG GLVT++V GDVGAV A+ +AGA A
Sbjct: 3 ALGLIETKGLIAAIESADAMLKAANVKLLEKTEVGGGLVTIVVSGDVGAVSASVEAGAVA 62
Query: 66 AENVGE--LISVHVIPRPHAEVEVILPHQE 93
A+ V E LIS HVIPRP E+ I+ +E
Sbjct: 63 AQRVDENSLISKHVIPRPDHELRNIIATKE 92
>gi|15802979|ref|NP_289009.1| detox protein [Escherichia coli O157:H7 EDL933]
gi|15832573|ref|NP_311346.1| detox protein [Escherichia coli O157:H7 str. Sakai]
gi|26248824|ref|NP_754864.1| Ethanolamine utilization protein eutM precursor [Escherichia coli
CFT073]
gi|75178050|ref|ZP_00698109.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Shigella boydii BS512]
gi|75187201|ref|ZP_00700468.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli E24377A]
gi|75196462|ref|ZP_00706532.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli HS]
gi|75211418|ref|ZP_00711508.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli B171]
gi|75229221|ref|ZP_00715789.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli B7A]
gi|75240106|ref|ZP_00724065.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli F11]
gi|75257260|ref|ZP_00728784.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli E22]
gi|75515793|ref|ZP_00737928.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli 53638]
gi|82544906|ref|YP_408853.1| detox protein [Shigella boydii Sb227]
gi|83570671|ref|ZP_00922114.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Shigella dysenteriae 1012]
gi|83586895|ref|ZP_00925526.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli 101-1]
gi|91211786|ref|YP_541772.1| detox protein [Escherichia coli UTI89]
gi|117624653|ref|YP_853566.1| putative detox protein in ethanolamine utilization [Escherichia
coli APEC O1]
gi|12516832|gb|AAG57566.1|AE005475_1 detox protein [Escherichia coli O157:H7 EDL933]
gi|26109230|gb|AAN81432.1|AE016764_114 Ethanolamine utilization protein eutM precursor [Escherichia coli
CFT073]
gi|13362789|dbj|BAB36742.1| detox protein [Escherichia coli O157:H7 str. Sakai]
gi|81246317|gb|ABB67025.1| detox protein [Shigella boydii Sb227]
gi|91073360|gb|ABE08241.1| detox protein [Escherichia coli UTI89]
gi|115513777|gb|ABJ01852.1| putative detox protein in ethanolamine utilization [Escherichia
coli APEC O1]
Length = 111
Score = 92.4 bits (228), Expect = 6e-18, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAMVKAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 17 ALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 76
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 77 AQRIGELVSVHVIPRPHGDLEEVFP 101
>gi|74312982|ref|YP_311401.1| detox protein [Shigella sonnei Ss046]
gi|73856459|gb|AAZ89166.1| detox protein [Shigella sonnei Ss046]
Length = 111
Score = 92.4 bits (228), Expect = 8e-18, Method: Composition-based stats.
Identities = 59/85 (69%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAM+KAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 17 ALGMIETRGLVALIEASDAMLKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 76
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 77 AQRIGELVSVHVIPRPHGDLEEVFP 101
>gi|16760971|ref|NP_456588.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16765368|ref|NP_460983.1| polyhedral body protein [Salmonella typhimurium LT2]
gi|29141333|ref|NP_804675.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|62180616|ref|YP_217033.1| Propanediol utilization: polyhedral bodies [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|60392892|sp|P0A1C7|PDUA_SALTY Propanediol utilization protein pduA
gi|60392893|sp|P0A1C8|PDUA_SALTI Propanediol utilization protein pduA
gi|25347176|pir||AI0759 probable propanediol utilization protein PduA pduA [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|5069450|gb|AAB84107.2| PduA [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420568|gb|AAL20942.1| propanediol utilization protein [Salmonella typhimurium LT2]
gi|16503269|emb|CAD02399.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136960|gb|AAO68524.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|62128249|gb|AAX65952.1| Propanediol utilization: polyhedral bodies [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|157082272|gb|ABV11950.1| hypothetical protein CKO_00798 [Citrobacter koseri ATCC BAA-895]
Length = 94
Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 77/85 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ +VHVIPRPH +VE ILP
Sbjct: 65 ARNVGEVKAVHVIPRPHTDVEKILP 89
>gi|56413060|ref|YP_150135.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|56127317|gb|AAV76823.1| putative propanediol utilization protein PduA [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 94
Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats.
Identities = 66/85 (77%), Positives = 76/85 (89%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL IEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMVETKGLTATIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A NVGE+ +VHVIPRPH +VE ILP
Sbjct: 65 ARNVGEVKAVHVIPRPHTDVEKILP 89
>gi|116334190|ref|YP_795717.1| Propanediol utilization protein [Lactobacillus brevis ATCC 367]
gi|116099537|gb|ABJ64686.1| Propanediol utilization protein [Lactobacillus brevis ATCC 367]
Length = 96
Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 78/86 (90%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET+GLV +IEAADAMVKAANV ++G+E++G+GLVTVMVRGDVGAVKAA DAG A
Sbjct: 3 NALGMIETKGLVASIEAADAMVKAANVEMMGQEKIGSGLVTVMVRGDVGAVKAAVDAGVA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AAEN+GE+ S VIPRPHAEVE ILP
Sbjct: 63 AAENIGEVQSSFVIPRPHAEVENILP 88
>gi|75237800|ref|ZP_00721816.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli E110019]
Length = 111
Score = 92.0 bits (227), Expect = 9e-18, Method: Composition-based stats.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IE +DAMVKAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 17 ALGMIETRGLVALIETSDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 76
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 77 AQRIGELVSVHVIPRPHGDLEEVFP 101
>gi|148380064|ref|YP_001254605.1| propanediol/ethanolamine utilization protein [Clostridium
botulinum A str. ATCC 3502]
gi|153931095|ref|YP_001384361.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|153935738|ref|YP_001387898.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
gi|148289548|emb|CAL83649.1| putative propanediol/ethanolamine utilization protein
[Clostridium botulinum A str. ATCC 3502]
gi|152927139|gb|ABS32639.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152931652|gb|ABS37151.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
Length = 265
Score = 92.0 bits (227), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL+ A+EAAD MVK+A+V++I K VG GLVT+ V GDVGAVKA+ +AG AA
Sbjct: 3 ALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASIEAGVAA 62
Query: 66 AENVGE--LISVHVIPRPHAEVEVIL 89
+ + E L+S HVIPRPH E+E I+
Sbjct: 63 VKKLDEGFLVSEHVIPRPHEELESII 88
>gi|152971722|ref|YP_001336831.1| Propanediol utilization: polyhedral bodies [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150956571|gb|ABR78601.1| Propanediol utilization: polyhedral bodies [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 94
Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats.
Identities = 66/85 (77%), Positives = 77/85 (90%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GL AIEAADAMVK+ANV L+G E++G+GLVTV+VRGDVGAVKAATDAGAAA
Sbjct: 5 ALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +VGE+ +VHVIPRPH +VE ILP
Sbjct: 65 ARHVGEVKAVHVIPRPHTDVEKILP 89
>gi|16765785|ref|NP_461400.1| putative detox protein [Salmonella typhimurium LT2]
gi|56412651|ref|YP_149726.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62181031|ref|YP_217448.1| putative detox protein in ethanolamine utilization [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|1168825|sp|P41791|EUTM_SALTY Ethanolamine utilization protein eutM precursor
gi|687643|gb|AAA80207.1| cchA gene product
gi|3885916|gb|AAC78116.1| putative carboxysome structural protein [Salmonella typhimurium]
gi|16421006|gb|AAL21359.1| putative detox protein in ethanolamine utilization [Salmonella
typhimurium LT2]
gi|56126908|gb|AAV76414.1| putative ethanolamine utilization protein EutN [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62128664|gb|AAX66367.1| putative detox protein in ethanolamine utilization [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 96
Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAMVKAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 3 ALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 63 AQRIGELVSVHVIPRPHGDLEEVFP 87
>gi|154503201|ref|ZP_02040261.1| hypothetical protein RUMGNA_01025 [Ruminococcus gnavus ATCC
29149]
gi|153796195|gb|EDN78615.1| hypothetical protein RUMGNA_01025 [Ruminococcus gnavus ATCC
29149]
Length = 93
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/85 (74%), Positives = 72/85 (84%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVETRGL AIEAADAM KAA VTL+G E++G+GLVTVMVRGDVGAVKAA + GA A
Sbjct: 7 ALGMVETRGLTAAIEAADAMTKAAEVTLVGTEKIGSGLVTVMVRGDVGAVKAAVETGADA 66
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GEL++ HVIPRPH +VE ILP
Sbjct: 67 AGRLGELVATHVIPRPHNDVEKILP 91
>gi|123442944|ref|YP_001006919.1| putative propanediol utilization protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122089905|emb|CAL12762.1| putative propanediol utilization protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 98
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/85 (76%), Positives = 75/85 (88%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GLV AIEAAD MVK+ANVTL+G E++G+GLVTV+VRGDVGAVKAATDAGA A
Sbjct: 5 ALGMVETKGLVAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAIA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A N+GE+ S HVIPRPH +VE LP
Sbjct: 65 AANIGEVKSTHVIPRPHTDVEAFLP 89
>gi|77962430|ref|ZP_00826250.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia mollaretii ATCC 43969]
Length = 91
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 77/86 (89%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG++ET+GLV AIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLIETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGEL S HVIPRPH++VE ILP
Sbjct: 63 AASAVGELTSSHVIPRPHSDVEAILP 88
>gi|152971322|ref|YP_001336431.1| detox protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150956171|gb|ABR78201.1| detox protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|157081823|gb|ABV11501.1| hypothetical protein CKO_00338 [Citrobacter koseri ATCC BAA-895]
Length = 96
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/85 (71%), Positives = 72/85 (84%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAMVKAA V L+G +Q+G GLVT MVRGDV A KAATDAGAAA
Sbjct: 3 ALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLVTAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 63 AQRIGELVSVHVIPRPHGDLEEVFP 87
>gi|83596376|gb|ABC25533.1| PduA [Roseburia inulinivorans]
Length = 93
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/86 (68%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGA-IEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
ALGM+ET GLV + IEAAD M KA+NVTL+G E++G+GLVTVMVRGDVGAVK+A +AGA+
Sbjct: 5 ALGMIETIGLVASHIEAADEMCKASNVTLVGTEKIGSGLVTVMVRGDVGAVKSAVEAGAS 64
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
+A +GEL++ HVIPRPH +VE+ILP
Sbjct: 65 SAGTLGELVATHVIPRPHGDVEMILP 90
>gi|123442951|ref|YP_001006926.1| putative propanediol utilization protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122089912|emb|CAL12769.1| putative propanediol utilization protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 91
Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG++ET+GLV AIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLIETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASAVGEVKSCHVIPRPHSDVEAILP 88
>gi|89109262|ref|AP_003042.1| predicted carboxysome structural protein, ethanolamine
utilization protein [Escherichia coli W3110]
gi|90111439|ref|NP_416952.2| predicted carboxysome structural protein, ethanolamine
utilization protein [Escherichia coli K12]
gi|110642629|ref|YP_670359.1| ethanolamine utilization protein EutM precursor [Escherichia coli
536]
gi|124529769|ref|ZP_01700646.1| microcompartments protein [Escherichia coli B]
gi|78099972|sp|P0ABF5|EUTM_ECOL6 Ethanolamine utilization protein eutM precursor
gi|78099973|sp|P0ABF4|EUTM_ECOLI Ethanolamine utilization protein eutM precursor
gi|85675409|dbj|BAA16335.2| predicted carboxysome structural protein, ethanolamine
utilization protein [Escherichia coli W3110]
gi|87082108|gb|AAC75510.2| predicted carboxysome structural protein, ethanolamine
utilization protein [Escherichia coli K12]
gi|110344221|gb|ABG70458.1| ethanolamine utilization protein EutM precursor [Escherichia coli
536]
gi|124499629|gb|EAY47114.1| microcompartments protein [Escherichia coli B]
gi|157067596|gb|ABV06851.1| ethanolamine utilization protein EutM [Escherichia coli HS]
gi|157080735|gb|ABV20443.1| ethanolamine utilization protein EutM [Escherichia coli E24377A]
Length = 97
Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV IEA+DAMVKAA V L+G +Q+G GL T MVRGDV A KAATDAGAAA
Sbjct: 3 ALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E + P
Sbjct: 63 AQRIGELVSVHVIPRPHGDLEEVFP 87
>gi|77975834|ref|ZP_00831368.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia frederiksenii ATCC 33641]
gi|77977307|ref|ZP_00832759.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia intermedia ATCC 29909]
Length = 91
Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 77/86 (89%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG+VET+GLV AIEAADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKAA DAG+A
Sbjct: 3 NALGLVETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VGE+ S HVIPRPH++VE ILP
Sbjct: 63 AASAVGEVKSCHVIPRPHSDVEAILP 88
>gi|124025321|ref|YP_001014437.1| carboxysome structural protein CsoS1 [Prochlorococcus marinus str.
NATL1A]
gi|123960389|gb|ABM75172.1| carboxysome structural protein CsoS1 [Prochlorococcus marinus str.
NATL1A]
Length = 182
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI KE VG G VTVMVRG+ GAV A+ AGA A
Sbjct: 89 ALGMIETRGLVPAIEAADAMTKAAEVNLIVKELVGGGYVTVMVRGETGAVNASVRAGADA 148
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH E+E L
Sbjct: 149 CERVGDGLVAAHIIARPHGEIEPAL 173
>gi|72383721|ref|YP_293076.1| carboxysome shell peptide, CsoS1 [Prochlorococcus marinus str.
NATL2A]
gi|72003571|gb|AAZ59373.1| carboxysome shell peptide, CsoS1 [Prochlorococcus marinus str.
NATL2A]
Length = 182
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI KE VG G VTVMVRG+ GAV A+ AGA A
Sbjct: 89 ALGMIETRGLVPAIEAADAMTKAAEVNLIVKELVGGGYVTVMVRGETGAVNASVRAGADA 148
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH E+E L
Sbjct: 149 CERVGDGLVAAHIIARPHGEIEPAL 173
>gi|77977039|ref|ZP_00832500.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Yersinia intermedia ATCC 29909]
Length = 97
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 72/85 (84%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV IEA+DAMVKAA V L+G +Q+G GLVT MVRGDV A KAATDAGAAA
Sbjct: 3 ALGLIETKGLVALIEASDAMVKAARVKLVGVKQIGGGLVTAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL+SVHVIPRPH ++E I P
Sbjct: 63 AQRIGELVSVHVIPRPHGDLEEIFP 87
>gi|78043317|ref|YP_359540.1| bacterial microcompartments family protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995432|gb|ABB14331.1| bacterial microcompartments family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 94
Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats.
Identities = 65/81 (80%), Positives = 76/81 (93%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV AIEAADAMVKAANVT++G E++G GLVT+MVRGDVGAVKAATDAGAAA
Sbjct: 4 ALGLIETKGLVAAIEAADAMVKAANVTIVGYEKIGFGLVTIMVRGDVGAVKAATDAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVE 86
A+ VGEL++VHVIPRPH EVE
Sbjct: 64 AQKVGELVAVHVIPRPHTEVE 84
>gi|120597255|ref|YP_961829.1| microcompartment protein [Shewanella sp. W3-18-1]
gi|146291316|ref|YP_001181740.1| microcompartments protein [Shewanella putrefaciens CN-32]
gi|120557348|gb|ABM23275.1| microcompartment protein [Shewanella sp. W3-18-1]
gi|145563006|gb|ABP73941.1| microcompartments protein [Shewanella putrefaciens CN-32]
Length = 96
Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats.
Identities = 61/86 (70%), Positives = 74/86 (86%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALGM+ET GL+GAI ADAMVK+ANV L+G E++G+GLVTVMVRGDVGAVKA+ +AG+A
Sbjct: 3 NALGMIETYGLIGAIVGADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKASVEAGSA 62
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA VG++ S HVIPRPH EVE +LP
Sbjct: 63 AAAGVGQVKSTHVIPRPHNEVETLLP 88
>gi|120554159|ref|YP_958510.1| microcompartments protein [Marinobacter aquaeolei VT8]
gi|120324008|gb|ABM18323.1| microcompartments protein [Marinobacter aquaeolei VT8]
Length = 125
Score = 89.4 bits (220), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ETRGL IEA+DAMVKAA V L+G EQ+G G VT +VRGDV A KAATDAGAAA
Sbjct: 23 ALGIIETRGLTALIEASDAMVKAARVELVGYEQIGHGYVTALVRGDVAACKAATDAGAAA 82
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GELI+VHVIPRPHA++E I P
Sbjct: 83 AQRLGELIAVHVIPRPHADLEAIFP 107
>gi|75242283|ref|ZP_00726045.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli F11]
gi|91213917|ref|YP_543903.1| hypothetical protein UTI89_C4969 [Escherichia coli UTI89]
gi|110644712|ref|YP_672442.1| hypothetical protein ECP_4605 [Escherichia coli 536]
gi|23954280|emb|CAD42078.1| hypothetical protein [Escherichia coli]
gi|91075491|gb|ABE10372.1| hypothetical protein UTI89_C4969 [Escherichia coli UTI89]
gi|110346304|gb|ABG72541.1| hypothetical protein ECP_4605 [Escherichia coli 536]
Length = 94
Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG++ET+GLV IEAADAM KAANV LIG E VG+GLVT MV+GDVGAVKAA D+G
Sbjct: 2 GDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGV 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVILPH 91
+A+ +GE+++ VI RPH ++ I+ H
Sbjct: 62 ESAQRIGEVVTSLVIARPHNDINKIVSH 89
>gi|110644713|ref|YP_672443.1| hypothetical protein ECP_4606 [Escherichia coli 536]
gi|110346305|gb|ABG72542.1| hypothetical protein ECP_4606 [Escherichia coli 536]
Length = 109
Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/86 (56%), Positives = 69/86 (80%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG++ET+GLV I AADAM K+ANV LIG E +G+GLVTVMV+GDVGAVKA+ D+G
Sbjct: 19 GDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGL 78
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
+A+++GE+++ VI RPH ++ I+
Sbjct: 79 ESAQHIGEVVTSLVIARPHNDINKIV 104
>gi|118444984|ref|YP_878963.1| PduA protein-like protein [Clostridium novyi NT]
gi|118135440|gb|ABK62484.1| PduA protein-like protein [Clostridium novyi NT]
Length = 191
Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 63/84 (75%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG +ET G++ A+EAAD+ VK+ANV +G E+ GLVT+ + GDVGAVKAA DAG A+
Sbjct: 5 ALGFIETLGMIPAVEAADSCVKSANVKFLGYERSTGGLVTIKIEGDVGAVKAAIDAGKAS 64
Query: 66 AENVGELISVHVIPRPHAEVEVIL 89
A+ +G +IS VIPRP +++ ++
Sbjct: 65 AQKLGVVISTLVIPRPANDIDYMV 88
>gi|51246897|ref|YP_066781.1| ethanolamine utilization protein, (EutM) [Desulfotalea
psychrophila LSv54]
gi|50877934|emb|CAG37774.1| probable ethanolamine utilization protein, (EutM) [Desulfotalea
psychrophila LSv54]
Length = 92
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 74/88 (84%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
++LGM+ET+GL+ IEA+DAMVKAA V L+G +Q+GAGLVT +VRGDV A KAATDAGAA
Sbjct: 2 DSLGMIETKGLIALIEASDAMVKAARVQLVGYKQIGAGLVTAIVRGDVAACKAATDAGAA 61
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQ 92
AA +GE+++VHVIPRPH ++E + P +
Sbjct: 62 AAARIGEVVAVHVIPRPHGDLEEVFPFK 89
>gi|87302496|ref|ZP_01085313.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 5701]
gi|87282840|gb|EAQ74797.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 5701]
Length = 209
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA VT+I +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 116 ALGMIETRGLVPAIEAADAMTKAAEVTMISREFVGGGYVTVMVRGETGAVNAAVRAGADA 175
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH+E+E IL
Sbjct: 176 CERVGDGLVAAHIIARPHSELEPIL 200
>gi|116620453|ref|YP_822609.1| microcompartments protein [Solibacter usitatus Ellin6076]
gi|116223615|gb|ABJ82324.1| microcompartments protein [Solibacter usitatus Ellin6076]
Length = 190
Score = 87.4 bits (215), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+G++ET+GLVG I+A+DAM K A+V L+ ++G G VT +VRGDVG+V+AA DAGA A
Sbjct: 105 AIGLIETKGLVGLIDASDAMCKTASVELMKIIEIGGGFVTAVVRGDVGSVRAAVDAGALA 164
Query: 66 AENVGELISVHVIPRPH 82
+ +VGELISVHVIPRPH
Sbjct: 165 SRDVGELISVHVIPRPH 181
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M N ALGM+ET+GLV IE D+M+KAANV+ G VG+GLVT V+GDVGAVKAATD
Sbjct: 1 MPNQQALGMIETKGLVALIEGTDSMLKAANVSFAGWVSVGSGLVTAFVQGDVGAVKAATD 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEV 85
AGAA+A VGEL SV VI RPH E+
Sbjct: 61 AGAASARKVGELASVLVISRPHDEL 85
>gi|153953479|ref|YP_001394244.1| Predicted microcompartment shellprotein [Clostridium kluyveri DSM
555]
gi|146346360|gb|EDK32896.1| Predicted microcompartment shellprotein [Clostridium kluyveri DSM
555]
Length = 363
Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N A+G++ET G+ A+EAAD+ VK+ANVTLIG E GLVT+ + GDVGAVKAA DAG
Sbjct: 2 NGEAIGVIETIGMTAAVEAADSCVKSANVTLIGYELSTGGLVTIKIEGDVGAVKAAIDAG 61
Query: 63 AAAAENVGELISVHVIPRPHAEVEVIL 89
+AE +G ++ VIPRP + I+
Sbjct: 62 KVSAERIGTVVGTLVIPRPAQNLHKII 88
>gi|51246886|ref|YP_066770.1| ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
gi|50877923|emb|CAG37763.1| probable ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
Length = 92
Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
++LGM+ET+GL IEA+DAMVKAA V L+G +Q+GAGLVT +VRGDV A KAATDAGAA
Sbjct: 2 DSLGMIETKGLTALIEASDAMVKAARVQLVGYKQIGAGLVTAIVRGDVAACKAATDAGAA 61
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQ 92
AA +GE+++VHVIPRPH ++E + P +
Sbjct: 62 AAARIGEVVAVHVIPRPHGDLEEVFPFK 89
>gi|33240008|ref|NP_874950.1| Carboxysome shell peptide, CsoS1 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237534|gb|AAP99602.1| Carboxysome shell peptide, CsoS1 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 169
Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V LI +E VG G V+V+VRG+ GAV A+ AGA A
Sbjct: 76 ALGMIETRGMVPAIEAADAMTKAAEVNLIAREYVGGGYVSVLVRGETGAVNASVRAGADA 135
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE IL
Sbjct: 136 CERVGDGLVAAHIIARPHVEVEPIL 160
>gi|88810437|ref|ZP_01125694.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
gi|88792067|gb|EAR23177.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
Length = 118
Score = 86.3 bits (212), Expect = 5e-16, Method: Composition-based stats.
Identities = 58/86 (67%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 22 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 81
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I RPH EVE LP
Sbjct: 82 CERVGDGLVAAHIIARPHREVEPALP 107
>gi|37542657|gb|AAQ93021.1| GldA [Lactobacillus hilgardii]
Length = 85
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 57/74 (77%), Positives = 68/74 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET+GLV +IEAADAMVKAANV L+G+E++G GLVTVMVRGDVGAVKAA DAG +A
Sbjct: 5 ALGLVETQGLVASIEAADAMVKAANVDLVGQEKIGHGLVTVMVRGDVGAVKAAVDAGVSA 64
Query: 66 AENVGELISVHVIP 79
AEN+GE+IS +VIP
Sbjct: 65 AENIGEVISNYVIP 78
>gi|117618230|ref|YP_855875.1| bacterial microcompartments family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559637|gb|ABK36585.1| bacterial microcompartments family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 94
Score = 85.9 bits (211), Expect = 7e-16, Method: Composition-based stats.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG++ET+GLV IEAADAM KAANV LIG E VG+GLVT MV+GDVGAVKAA D+G
Sbjct: 2 GDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGV 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVILPH 91
+A+ +GE+++ VI RPH ++ I+ H
Sbjct: 62 ESAQRIGEVVTSLVIARPHNDISKIVAH 89
>gi|84518394|ref|ZP_01005743.1| Carboxysome shell peptide [Prochlorococcus marinus str. MIT 9211]
gi|84513143|gb|EAQ09481.1| Carboxysome shell peptide [Prochlorococcus marinus str. MIT 9211]
Length = 190
Score = 85.9 bits (211), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+L+ +E VG G VTVMVRG+ GAV A+ AGA A
Sbjct: 97 ALGMIETRGMVPAIEAADAMTKAAEVSLVAREYVGGGYVTVMVRGETGAVNASVRAGADA 156
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 157 CERVGDGLVAAHIIARPHIEVEPAL 181
>gi|120554158|ref|YP_958509.1| microcompartments protein [Marinobacter aquaeolei VT8]
gi|120324007|gb|ABM18322.1| microcompartments protein [Marinobacter aquaeolei VT8]
Length = 98
Score = 85.5 bits (210), Expect = 8e-16, Method: Composition-based stats.
Identities = 58/85 (68%), Positives = 72/85 (84%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL IEA+DAMVKAA V L+G +Q+G+GLVT MVRGDV A KAATDAGAAA
Sbjct: 4 ALGIIETKGLTALIEASDAMVKAARVELVGYKQIGSGLVTAMVRGDVAACKAATDAGAAA 63
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GEL++VHVIPRPH ++E I P
Sbjct: 64 AQRLGELVAVHVIPRPHGDLEAIFP 88
>gi|87302503|ref|ZP_01085320.1| carboxysome shell peptide [Synechococcus sp. WH 5701]
gi|87282847|gb|EAQ74804.1| carboxysome shell peptide [Synechococcus sp. WH 5701]
Length = 117
Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 23 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 82
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 83 CERVGDGLVAAHIIARPHREVEPAL 107
>gi|117617905|ref|YP_855876.1| bacterial microcompartments family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559312|gb|ABK36260.1| bacterial microcompartments family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 92
Score = 84.7 bits (208), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/86 (58%), Positives = 68/86 (79%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG++ET+GLV IEAADAM K+ANV LI E +G+GLVTVMV+GDVGAVKAA D+G
Sbjct: 2 GDALGLIETKGLVACIEAADAMCKSANVELISYENIGSGLVTVMVKGDVGAVKAAVDSGV 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
+A+ +GE+++ VI RPH ++ I+
Sbjct: 62 ESAQRIGEVVTSLVIARPHNDINKIV 87
>gi|6014734|sp|P45690|CSOB_THINE Major carboxysome shell protein 1B
gi|3449374|gb|AAC32557.1| carboxysome shell polypeptide [Halothiobacillus neapolitanus]
Length = 110
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+G+ VG G VTVMVRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVGRSFVGGGYVTVMVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE+ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVEIILP 93
>gi|145953910|ref|ZP_01802917.1| hypothetical protein CdifQ_04002199 [Clostridium difficile
QCD-32g58]
Length = 233
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+A+G++E G V AIEA+DA +K+ANV ++ ++VGAG+VT+ + GDVGAVKAA +AG
Sbjct: 2 DAIGLIEVIGYVAAIEASDACLKSANVNIVRIDKVGAGIVTLTICGDVGAVKAALEAGEI 61
Query: 65 AAENVGELISVHVIPRPHAEV 85
AA VG L + H+IPR H EV
Sbjct: 62 AASRVGTLRTSHIIPRIHNEV 82
>gi|126699526|ref|YP_001088423.1| putative ethanolamine/propanediol utilisation protein
[Clostridium difficile 630]
gi|115250963|emb|CAJ68792.1| putative ethanolamine/propanediol utilisation protein
[Clostridium difficile 630]
Length = 233
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+A+G++E G V AIEA+DA +K+ANV ++ ++VGAG+VT+ + GDVGAVKAA +AG
Sbjct: 2 DAIGLIEVIGYVAAIEASDACLKSANVNIVRVDKVGAGIVTLTICGDVGAVKAALEAGEI 61
Query: 65 AAENVGELISVHVIPRPHAEV 85
AA VG L + H+IPR H EV
Sbjct: 62 AASRVGTLRTSHIIPRIHNEV 82
>gi|75242282|ref|ZP_00726044.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli F11]
gi|91213918|ref|YP_543904.1| hypothetical protein UTI89_C4970 [Escherichia coli UTI89]
gi|23954281|emb|CAD42079.1| hypothetical protein [Escherichia coli]
gi|91075492|gb|ABE10373.1| hypothetical protein UTI89_C4970 [Escherichia coli UTI89]
Length = 92
Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/86 (56%), Positives = 69/86 (80%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG++ET+GLV I AADAM K+ANV LIG E +G+GLVTVMV+GDVGAVKA+ D+G
Sbjct: 2 GDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGL 61
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
+A+++GE+++ VI RPH ++ I+
Sbjct: 62 ESAQHIGEVVTSLVIARPHNDINKIV 87
>gi|153938952|ref|YP_001391414.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
gi|152934848|gb|ABS40346.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
Length = 102
Score = 84.0 bits (206), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MA ALG++ET GLV A+EAADAM K+A+V LIG E V +G ++V+VRGDVGA K A D
Sbjct: 1 MARYEALGLIETFGLVFALEAADAMCKSADVELIGYENVASGYISVLVRGDVGACKTAVD 60
Query: 61 AGAAAAENV--GELISVHVIPRPHAEVEVIL 89
AG AA + G L S VIPRPH ++E I+
Sbjct: 61 AGVAAVNGMEGGNLYSSIVIPRPHEDLEKII 91
>gi|75765967|pdb|2A1B|A Chain A, Carboxysome Shell Protein Ccmk2
gi|75765968|pdb|2A1B|B Chain B, Carboxysome Shell Protein Ccmk2
gi|75765969|pdb|2A1B|C Chain C, Carboxysome Shell Protein Ccmk2
gi|75765970|pdb|2A1B|D Chain D, Carboxysome Shell Protein Ccmk2
gi|75765971|pdb|2A1B|E Chain E, Carboxysome Shell Protein Ccmk2
gi|75765972|pdb|2A1B|F Chain F, Carboxysome Shell Protein Ccmk2
gi|75765973|pdb|2A1B|G Chain G, Carboxysome Shell Protein Ccmk2
gi|75765974|pdb|2A1B|H Chain H, Carboxysome Shell Protein Ccmk2
gi|75765975|pdb|2A1B|I Chain I, Carboxysome Shell Protein Ccmk2
gi|75765976|pdb|2A1B|J Chain J, Carboxysome Shell Protein Ccmk2
gi|75765977|pdb|2A1B|K Chain K, Carboxysome Shell Protein Ccmk2
gi|75765978|pdb|2A1B|L Chain L, Carboxysome Shell Protein Ccmk2
Length = 116
Score = 84.0 bits (206), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAAD+MVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETRGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSGVQASVSAGIEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ANRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|16329368|ref|NP_440096.1| carbon dioxide concentrating mechanism protein; CcmK
[Synechocystis sp. PCC 6803]
gi|2493553|sp|P72761|CCMK2_SYNY3 Carbon dioxide concentrating mechanism protein ccmK homolog 2
gi|1651849|dbj|BAA16776.1| carbon dioxide concentrating mechanism protein; CcmK
[Synechocystis sp. PCC 6803]
Length = 103
Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAAD+MVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETRGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ANRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|148380075|ref|YP_001254616.1| propanediol utilization protein [Clostridium botulinum A str.
ATCC 3502]
gi|153932579|ref|YP_001384372.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|153934753|ref|YP_001387909.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
gi|148289559|emb|CAL83660.1| propanediol utilization protein [Clostridium botulinum A str.
ATCC 3502]
gi|152928623|gb|ABS34123.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152930667|gb|ABS36166.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
Length = 102
Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
MA ALG++ET GLV A+EAADAM K+A+V LIG E V +G ++V+VRGDVGA K A D
Sbjct: 1 MARYEALGLIETFGLVFALEAADAMCKSADVELIGYENVASGYISVLVRGDVGACKTAVD 60
Query: 61 AGAAAAENV--GELISVHVIPRPHAEVEVIL 89
AG AA + G L S VIPRPH ++E I+
Sbjct: 61 AGVAAVNGMEGGNLYSSIVIPRPHEDLEKII 91
>gi|113952757|ref|YP_731163.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9311]
gi|113880108|gb|ABI45066.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9311]
Length = 143
Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 50 ALGMIETRGMVPAIEAADAMTKAAEVQLISREYVGGGYVTVMVRGETGAVNAAVRAGADA 109
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 110 CERVGDGLVAAHIIARPHDEVEPAL 134
>gi|75242284|ref|ZP_00726046.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Escherichia coli F11]
gi|91213916|ref|YP_543902.1| hypothetical protein UTI89_C4968 [Escherichia coli UTI89]
gi|110644711|ref|YP_672441.1| hypothetical protein ECP_4604 [Escherichia coli 536]
gi|23954279|emb|CAD42077.1| hypothetical protein [Escherichia coli]
gi|91075490|gb|ABE10371.1| hypothetical protein UTI89_C4968 [Escherichia coli UTI89]
gi|110346303|gb|ABG72540.1| hypothetical protein ECP_4604 [Escherichia coli 536]
Length = 92
Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV IEAADAM KAANV LIG E VG+GLVT MV+GDVGAV AA D+G A
Sbjct: 4 ALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVNAAVDSGVEA 63
Query: 66 AENVGELISVHVIPRPHAEVEVI 88
A +GE+++ VI RPH ++E I
Sbjct: 64 ARRIGEVVTSRVIARPHNDIEKI 86
>gi|134301110|ref|YP_001114606.1| microcompartments protein [Desulfotomaculum reducens MI-1]
gi|134053810|gb|ABO51781.1| microcompartments protein [Desulfotomaculum reducens MI-1]
Length = 96
Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M +ALG +ET GLV +EAADAM KAA+V LIG E V +G ++V+VRGDVGAVKAA +
Sbjct: 1 MEKNDALGFIETFGLVSVLEAADAMCKAADVELIGYENVASGYISVVVRGDVGAVKAAVE 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVIL 89
AG A VG++ S VI RPH ++E I+
Sbjct: 61 AGIKEASKVGKIYSSLVIARPHPDIEKII 89
>gi|85715081|ref|ZP_01046065.1| Carboxysome structural peptide [Nitrobacter sp. Nb-311A]
gi|85697996|gb|EAQ35869.1| Carboxysome structural peptide [Nitrobacter sp. Nb-311A]
Length = 116
Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALGM+ETRGLV AIEAADAM KA+ V LIG++ VG G VTV+VRG+ GAV AA AG
Sbjct: 6 NGIALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAG 65
Query: 63 AAAAENVGE-LISVHVIPRPHAEVEVILPHQ 92
A A E VG+ L++ H+I R H+EVE ILP Q
Sbjct: 66 ADACERVGDGLVAAHIIARVHSEVEGILPTQ 96
>gi|89897754|ref|YP_521241.1| hypothetical protein DSY5008 [Desulfitobacterium hafniense Y51]
gi|109647932|ref|ZP_01371835.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|89337202|dbj|BAE86797.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109641022|gb|EAT50577.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 96
Score = 83.2 bits (204), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/89 (57%), Positives = 66/89 (74%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M +ALG +ET GLV +EAADAM KAA V L+G E V +GL++V+VRGDVGAV+ A +
Sbjct: 1 MERNDALGFIETYGLVSVLEAADAMCKAAEVELVGYENVASGLISVVVRGDVGAVRTAVE 60
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVIL 89
AG AAA VG++ S +VI RPH +VE I+
Sbjct: 61 AGIAAASKVGQIYSTNVIARPHPDVEKIV 89
>gi|75676170|ref|YP_318591.1| Carboxysome structural peptide CsoS1B [Nitrobacter winogradskyi
Nb-255]
gi|74421040|gb|ABA05239.1| Carboxysome structural peptide CsoS1B [Nitrobacter winogradskyi
Nb-255]
Length = 113
Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALGM+ETRGLV AIEAADAM KA+ V LIG++ VG G VTV+VRG+ GAV AA AG
Sbjct: 6 NGIALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAG 65
Query: 63 AAAAENVGE-LISVHVIPRPHAEVEVILP 90
A A E VG+ L++ H+I R H+EVE ILP
Sbjct: 66 ADACERVGDGLVAAHIIARVHSEVEGILP 94
>gi|88810436|ref|ZP_01125693.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
gi|88792066|gb|EAR23176.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
Length = 105
Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/86 (67%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I RPH EVE LP
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPALP 94
>gi|148254111|ref|YP_001238696.1| major carboxysome shell protein 1C (Carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. BTAi1]
gi|146406284|gb|ABQ34790.1| major carboxysome shell protein 1C (Carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. BTAi1]
Length = 113
Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KA+ V LIG++ VG G VTVMVRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L + H+I RPH EVE +LP
Sbjct: 69 CERVGDGLAAAHIIARPHIEVEHVLP 94
>gi|90414631|ref|ZP_01222603.1| probable ethanolamine utilization protein (EutM) [Photobacterium
profundum 3TCK]
gi|90324264|gb|EAS40836.1| probable ethanolamine utilization protein (EutM) [Photobacterium
profundum 3TCK]
Length = 107
Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/85 (64%), Positives = 72/85 (84%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GL IEA+DAMVKAA V L+G +Q+G+G+V+ MVRGDV A KAATDAGAAA
Sbjct: 3 ALGIIETKGLTALIEASDAMVKAARVQLVGYKQIGSGIVSAMVRGDVAACKAATDAGAAA 62
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A+ +GE+++VHVIPRPH ++E I P
Sbjct: 63 AQRLGEVVAVHVIPRPHGDLEAIFP 87
>gi|92109478|ref|YP_571766.1| carboxysome structural peptide CsoS1B [Nitrobacter hamburgensis
X14]
gi|91802560|gb|ABE64934.1| carboxysome structural peptide CsoS1B [Nitrobacter hamburgensis
X14]
Length = 115
Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
N ALGM+ETRGLV AIEAADAM KA+ V LIG++ VG G VTV+VRG+ GAV AA AG
Sbjct: 5 NGIALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAG 64
Query: 63 AAAAENVGE-LISVHVIPRPHAEVEVILPHQ 92
A A E VG+ L++ H+I R H EVE ILP Q
Sbjct: 65 ADACERVGDGLVAAHIIARVHNEVEGILPTQ 95
>gi|114330821|ref|YP_747043.1| microcompartments protein [Nitrosomonas eutropha C91]
gi|114307835|gb|ABI59078.1| microcompartments protein [Nitrosomonas eutropha C91]
Length = 115
Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats.
Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 3/93 (3%)
Query: 1 MANAN--ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAA 58
MAN N ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA
Sbjct: 1 MANVNGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAA 60
Query: 59 TDAGAAAAENVGE-LISVHVIPRPHAEVEVILP 90
AGA A E VG+ L++ H+I R H+EVE ILP
Sbjct: 61 VRAGADACERVGDGLVAAHIIARVHSEVEGILP 93
>gi|4105526|gb|AAD02453.1| carboxysome structural polypeptide [Thiobacillus intermedius K12]
Length = 132
Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
AL ++ET GLV AIEAADAM KAA V LIG++ VG G VTV+VRGD GAV AA AGA A
Sbjct: 32 ALAIIETCGLVPAIEAADAMCKAAEVRLIGRQFVGGGYVTVLVRGDTGAVNAAVRAGADA 91
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQ 92
E VG+ L++VH+I R H EVE IL Q
Sbjct: 92 CERVGDGLVAVHIIARVHTEVEGILFDQ 119
>gi|33861106|ref|NP_892667.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639838|emb|CAE19008.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 98
Score = 82.0 bits (201), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 4 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 63
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 64 CERVGDGLVAAHIIARPHREVEPAL 88
>gi|150391564|ref|YP_001321613.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149951426|gb|ABR49954.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 100
Score = 82.0 bits (201), Expect = 9e-15, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M N ALG++ET G+V +EAADAM KAA+V LIG E V +G ++V+VRGDVGA KAA +
Sbjct: 1 MNNYKALGLIETFGIVFVLEAADAMCKAADVDLIGFENVASGYISVLVRGDVGACKAAVE 60
Query: 61 AGAAAAENVG-ELISVHVIPRPHAEVEVIL 89
+G A + +G E+ S VIP PH ++E I+
Sbjct: 61 SGIRAVKEMGSEVYSSLVIPSPHHDIEKII 90
>gi|117621491|ref|YP_855874.1| ethanolamine utilization protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562898|gb|ABK39846.1| ethanolamine utilization protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 92
Score = 82.0 bits (201), Expect = 9e-15, Method: Composition-based stats.
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET+GLV IEAADAM KAANV LIG E VG+GLVT MV+GDVGAV AA D+G A
Sbjct: 4 ALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVNAAVDSGVEA 63
Query: 66 AENVGELISVHVIPRPHAEVEVI 88
A+ +GE+++ VI RPH ++E I
Sbjct: 64 AKRIGEVVTSRVIARPHNDIEKI 86
>gi|84518401|ref|ZP_01005750.1| carboxysome shell protein [Prochlorococcus marinus str. MIT 9211]
gi|84513150|gb|EAQ09488.1| carboxysome shell protein [Prochlorococcus marinus str. MIT 9211]
Length = 98
Score = 82.0 bits (201), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 4 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 63
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 64 CERVGDGLVAAHIIARPHREVEPAL 88
>gi|33240001|ref|NP_874943.1| Carboxysome shell peptide, CsoS1 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33866251|ref|NP_897810.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 8102]
gi|78185182|ref|YP_377617.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. CC9902]
gi|78212296|ref|YP_381075.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. CC9605]
gi|87123943|ref|ZP_01079793.1| carboxysome shell peptide [Synechococcus sp. RS9917]
gi|87304065|ref|ZP_01086651.1| carboxysome shell peptide [Synechococcus sp. WH 5701]
gi|113953954|ref|YP_731171.1| Carbon dioxide concentrating mechanism protein ccmK
[Synechococcus sp. CC9311]
gi|116072221|ref|ZP_01469488.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. BL107]
gi|116075358|ref|ZP_01472618.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. RS9916]
gi|148239013|ref|YP_001224400.1| Carboxysome shell peptide [Synechococcus sp. WH 7803]
gi|61220652|sp|P0A328|CCMK_PROMA Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|61220653|sp|P0A329|CCMK_SYNPX Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|61220654|sp|P0A330|CCMK_SYNPW Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|1850938|gb|AAB48079.1| CcmK
gi|33237527|gb|AAP99595.1| Carboxysome shell peptide, CsoS1 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33639226|emb|CAE08234.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 8102]
gi|78169476|gb|ABB26573.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. CC9902]
gi|78196755|gb|ABB34520.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. CC9605]
gi|82799257|gb|ABB92184.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus 4O4]
gi|82799303|gb|ABB92229.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus 5B2]
gi|86168512|gb|EAQ69769.1| carboxysome shell peptide [Synechococcus sp. RS9917]
gi|87281502|gb|EAQ73546.1| carboxysome shell peptide [Synechococcus sp. WH 5701]
gi|90655414|gb|ABD96255.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 3M9]
gi|90655469|gb|ABD96309.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 3O6]
gi|90655518|gb|ABD96357.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 3O12]
gi|90655554|gb|ABD96392.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 4N23]
gi|90655587|gb|ABD96424.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 4P21]
gi|90655626|gb|ABD96462.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus GOM 5D20]
gi|113881305|gb|ABI46263.1| Carbon dioxide concentrating mechanism protein ccmK
[Synechococcus sp. CC9311]
gi|116064743|gb|EAU70502.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. BL107]
gi|116067555|gb|EAU73309.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. RS9916]
gi|147847552|emb|CAK23103.1| Carboxysome shell peptide [Synechococcus sp. WH 7803]
Length = 103
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|3182943|sp|O30709|CCMK_SYNP2 Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|2331050|gb|AAB66835.1| carbon dioxide concentrating mechanism protein [Synechococcus sp.
PCC 7002]
Length = 112
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG
Sbjct: 4 AVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDN 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
V G+++S H+I RPH +E +LP
Sbjct: 64 VSRVNGGQVLSTHIIARPHENLEYVLP 90
>gi|116619462|ref|YP_821618.1| microcompartments protein [Solibacter usitatus Ellin6076]
gi|116222624|gb|ABJ81333.1| microcompartments protein [Solibacter usitatus Ellin6076]
Length = 93
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/82 (73%), Positives = 69/82 (84%)
Query: 9 MVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAAAEN 68
M+ETRGL+ IEAADAMVKAA V L+G E++G+G VT MVRGDV AV+AATDAGAAAA
Sbjct: 1 MIETRGLIAMIEAADAMVKAAKVNLVGWEKIGSGYVTAMVRGDVAAVRAATDAGAAAARR 60
Query: 69 VGELISVHVIPRPHAEVEVILP 90
VGELI+VHVIPRPH +E ILP
Sbjct: 61 VGELIAVHVIPRPHQSLEDILP 82
>gi|123965848|ref|YP_001010929.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9515]
gi|61211608|sp|Q7V2D1|CCMK_PROMP Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|123200214|gb|ABM71822.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9515]
Length = 103
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|33863469|ref|NP_895029.1| carboxysome structural protein CsoS1 [Prochlorococcus marinus str.
MIT 9313]
gi|33640918|emb|CAE21374.1| carboxysome structural protein CsoS1 [Prochlorococcus marinus str.
MIT 9313]
Length = 204
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 111 ALGMIETRGMVPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAVNAAVRAGADA 170
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 171 CERVGDGLVAAHIIARPHQEVEPAL 195
>gi|32472047|ref|NP_865041.1| probable ethanolamine utilization protein EutM [Rhodopirellula
baltica SH 1]
gi|32397419|emb|CAD72725.1| probable ethanolamine utilization protein EutM [Rhodopirellula
baltica SH 1]
Length = 98
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 70/86 (81%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ ALGM+ET+G V A+EA DAM+KAANV +G +++GAGL TV V GDV AVKAATDAGA
Sbjct: 5 SEALGMIETKGFVSAVEATDAMMKAANVQFLGWDKIGAGLATVFVTGDVAAVKAATDAGA 64
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
AAA VGE++SV VIPRPH ++E IL
Sbjct: 65 AAAGRVGEVVSVQVIPRPHGDLEKIL 90
>gi|78778934|ref|YP_397046.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9312]
gi|123968140|ref|YP_001008998.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
AS9601]
gi|126695913|ref|YP_001090799.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9301]
gi|78712433|gb|ABB49610.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9312]
gi|123198250|gb|ABM69891.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
AS9601]
gi|126542956|gb|ABO17198.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9301]
Length = 103
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/89 (65%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQE 93
E VG+ L++ H+I RPH EVE L + E
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPALGNGE 97
>gi|112789925|gb|ABI21602.1| Smu11B [uncultured organism]
Length = 109
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+E RGLV IEAADA VK+ANV L+G E++ AGLVT +VRG+VGAVKAA +AGAAA
Sbjct: 5 ALGMIECRGLVAMIEAADAAVKSANVQLVGWEKIDAGLVTAIVRGEVGAVKAAVNAGAAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
VGE++S HVIPRPH+EV+ +P
Sbjct: 65 GRRVGEVVSTHVIPRPHSEVDSGIP 89
>gi|126657859|ref|ZP_01729012.1| carbon dioxide concentrating mechanism protein; CcmK [Cyanothece
sp. CCY0110]
gi|126620799|gb|EAZ91515.1| carbon dioxide concentrating mechanism protein; CcmK [Cyanothece
sp. CCY0110]
Length = 103
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIDA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ANRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|33863476|ref|NP_895036.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9313]
gi|72383714|ref|YP_293069.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
NATL2A]
gi|124025314|ref|YP_001014430.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
NATL1A]
gi|61211610|sp|Q7V6F7|CCMK_PROMM Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|33640925|emb|CAE21381.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9313]
gi|72003564|gb|AAZ59366.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
NATL2A]
gi|123960382|gb|ABM75165.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str.
NATL1A]
Length = 103
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|37521665|ref|NP_925042.1| carbon dioxide concentrating mechanism protein CcmK homolog
[Gloeobacter violaceus PCC 7421]
gi|35212663|dbj|BAC90037.1| ccmK [Gloeobacter violaceus PCC 7421]
Length = 102
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMIETKGFPAIVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGVES 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVNGGEILSTHIIARPHENLEYVLP 90
>gi|33866244|ref|NP_897803.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 8102]
gi|33639219|emb|CAE08227.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 8102]
Length = 183
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 90 ALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 149
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 150 CERVGDGLVAAHIIARPHQEVEPAL 174
>gi|78485191|ref|YP_391116.1| microcompartments protein [Thiomicrospira crunogena XCL-2]
gi|78363477|gb|ABB41442.1| Carboxysome shell peptide CsoS1 [Thiomicrospira crunogena XCL-2]
Length = 102
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 68 CERVGDGLVAAHIIARPHKEVEPVL 92
>gi|88807726|ref|ZP_01123238.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. WH 7805]
gi|88788940|gb|EAR20095.1| carboxysome shell peptide, CsoS1 [Synechococcus sp. WH 7805]
Length = 103
Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|88807733|ref|ZP_01123245.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 7805]
gi|88788947|gb|EAR20102.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. WH 7805]
Length = 192
Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 99 ALGMIETRGMVPAIEAADAMTKAAEVSLISREYVGGGYVTVMVRGETGAVNAAVRAGADA 158
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 159 CERVGDGLVAAHIIARPHQEVEPAL 183
>gi|82799250|gb|ABB92177.1| putative carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus 4O4]
gi|90655462|gb|ABD96302.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 3O6]
Length = 185
Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 92 ALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 151
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 152 CERVGDGLVAAHIIARPHQEVEPAL 176
>gi|119509595|ref|ZP_01628742.1| microcompartments protein [Nodularia spumigena CCY9414]
gi|119465784|gb|EAW46674.1| microcompartments protein [Nodularia spumigena CCY9414]
Length = 114
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GMVET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVGAGVES 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
+ V GE++S H+I RPH +E +LP
Sbjct: 64 VKRVHGGEVLSTHIIARPHENLEYVLP 90
>gi|146339305|ref|YP_001204353.1| major carboxysome shell protein 1A (carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. ORS278]
gi|148254112|ref|YP_001238697.1| major carboxysome shell protein 1A (carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. BTAi1]
gi|146192111|emb|CAL76116.1| major carboxysome shell protein 1A (carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. ORS278]
gi|146406285|gb|ABQ34791.1| major carboxysome shell protein 1A (carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. BTAi1]
Length = 98
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 9 MVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAAAEN 68
M+ETRGLV AIEAADAM KA+ V LIG++ VG G VTVMVRG+ GAV AA AGA A E
Sbjct: 1 MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACER 60
Query: 69 VGE-LISVHVIPRPHAEVEVILP 90
VG+ L + H+I RPH+EVE ILP
Sbjct: 61 VGDGLAAAHIIARPHSEVEHILP 83
>gi|148241917|ref|YP_001227074.1| Carboxysome shell peptide [Synechococcus sp. RCC307]
gi|147850227|emb|CAK27721.1| Carboxysome shell peptide [Synechococcus sp. RCC307]
Length = 104
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|78485189|ref|YP_391114.1| microcompartments protein [Thiomicrospira crunogena XCL-2]
gi|78363475|gb|ABB41440.1| Carboxysome shell peptide CsoS1 [Thiomicrospira crunogena XCL-2]
Length = 96
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 7 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVLVRGETGAVNAAVRAGADA 66
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQE 93
E VG+ L++ H+I RPH EVE +L ++
Sbjct: 67 CERVGDGLVAAHIIARPHKEVEPVLTMEQ 95
>gi|90655619|gb|ABD96455.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 5D20]
Length = 181
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 88 ALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 147
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 148 CERVGDGLVAAHIIARPHQEVEPAL 172
>gi|124022516|ref|YP_001016823.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9303]
gi|123962802|gb|ABM77558.1| carboxysome shell protein CsoS1 [Prochlorococcus marinus str. MIT
9303]
Length = 103
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|151335805|gb|ABS00400.1| carboxysome shell peptide [Paulinella chromatophora]
Length = 103
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG+E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVMVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPAL 93
>gi|46359637|dbj|BAD15318.1| carboxysome shell peptide [Hydrogenovibrio marinus]
Length = 95
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 7 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVMVRGETGAVNAAVRAGADA 66
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 67 CERVGDGLVAAHIIARPHKEVEPVL 91
>gi|90655511|gb|ABD96350.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 3O12]
Length = 177
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 84 ALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 143
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 144 CERVGDGLVAAHIIARPHQEVEPAL 168
>gi|22298490|ref|NP_681737.1| carbon dioxide concentrating mechanism protein
[Thermosynechococcus elongatus BP-1]
gi|22294670|dbj|BAC08499.1| carbon dioxide concentrating mechanism protein
[Thermosynechococcus elongatus BP-1]
Length = 102
Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVDS 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|86606272|ref|YP_475035.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-3-3Ab]
gi|86609255|ref|YP_478017.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86554814|gb|ABC99772.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-3-3Ab]
gi|86557797|gb|ABD02754.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 102
Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGLES 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVSGGEILSHHIIARPHENLEFVLP 90
>gi|46359638|dbj|BAD15319.1| carboxysome shell peptide [Hydrogenovibrio marinus]
Length = 97
Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVMVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 68 CERVGDGLVAAHIIARPHKEVEPVL 92
>gi|4836668|gb|AAD30516.1|AF129925_10 CsoS1B [Acidithiobacillus ferrooxidans]
Length = 114
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+G++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 10 ALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 69
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 70 CERVGDGLVAAHIIARVHSEVENILP 95
>gi|67920776|ref|ZP_00514295.1| microcompartments protein [Crocosphaera watsonii WH 8501]
gi|67856893|gb|EAM52133.1| microcompartments protein [Crocosphaera watsonii WH 8501]
Length = 103
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVGAGIEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ANRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|90655407|gb|ABD96248.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 3M9]
gi|90655580|gb|ABD96417.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 4P21]
Length = 187
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA VTLI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 94 ALGMIETRGVVPAIEAADAMTKAAEVTLICREFVGGGYVTVMVRGETGAVNAAVRAGADA 153
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 154 CERVGDGLVAAHIIARPHQEVEPAL 178
>gi|78485190|ref|YP_391115.1| microcompartments protein [Thiomicrospira crunogena XCL-2]
gi|78363476|gb|ABB41441.1| Carboxysome shell peptide CsoS1 [Thiomicrospira crunogena XCL-2]
Length = 97
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 68 CERVGDGLVAAHIIARPHKEVEPVL 92
>gi|46359639|dbj|BAD15320.1| carboxysome shell peptide [Hydrogenovibrio marinus]
Length = 100
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+ +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 7 ALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVMVRGETGAVNAAVRAGADA 66
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 67 CERVGDGLVAAHIIARPHKEVEPVL 91
>gi|3273487|gb|AAC24755.1| CsoS1A [Thiobacillus intermedius K12]
gi|4105525|gb|AAD02452.1| carboxysome structural polypeptide [Thiobacillus intermedius K12]
Length = 98
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 3/93 (3%)
Query: 1 MANAN--ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAA 58
MAN N ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA
Sbjct: 1 MANVNGIALGMIETRGLVPAIEAADAMCKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAA 60
Query: 59 TDAGAAAAENVGE-LISVHVIPRPHAEVEVILP 90
AGA A E VG+ L++ H+I R H+EVE ILP
Sbjct: 61 VRAGADACERVGDGLVAAHIIARVHSEVEGILP 93
>gi|146339304|ref|YP_001204352.1| major carboxysome shell protein 1C (Carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. ORS278]
gi|146192110|emb|CAL76115.1| major carboxysome shell protein 1C (Carbon dioxide concentrating
mechanism protein) [Bradyrhizobium sp. ORS278]
Length = 102
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 9 MVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAAAEN 68
M+ETRGLV AIEAADAM KA+ V LIG++ VG G VTVMVRG+ GAV AA AGA A E
Sbjct: 1 MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACER 60
Query: 69 VGE-LISVHVIPRPHAEVEVILP 90
VG+ L + H+I RPH EVE +LP
Sbjct: 61 VGDGLAAAHIIARPHIEVEHVLP 83
>gi|148241924|ref|YP_001227081.1| Carboxysome shell peptide, CsoS1 [Synechococcus sp. RCC307]
gi|147850234|emb|CAK27728.1| Carboxysome shell peptide, CsoS1 [Synechococcus sp. RCC307]
Length = 169
Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V +I +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 77 ALGMIETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVRGETGAVNAAVRAGADA 136
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 137 CERVGDGLVAAHIIARPHGEVEPAL 161
>gi|78212303|ref|YP_381082.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9605]
gi|78196762|gb|ABB34527.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9605]
Length = 178
Score = 80.1 bits (196), Expect = 4e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+LI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 85 ALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 144
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 145 CERVGDGLVAAHIIARPHKEVEPVL 169
>gi|113477306|ref|YP_723367.1| microcompartments protein [Trichodesmium erythraeum IMS101]
gi|110168354|gb|ABG52894.1| microcompartments protein [Trichodesmium erythraeum IMS101]
Length = 103
Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ETRG +EAADAMVKAA VTL+G E++G+ VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIES 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVDGGEVVSTHIIARPHENLEYVLP 90
>gi|17228362|ref|NP_484910.1| carbon dioxide concentrating mechanism protein [Nostoc sp. PCC
7120]
gi|23128653|ref|ZP_00110493.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Nostoc punctiforme PCC 73102]
gi|75910668|ref|YP_324964.1| microcompartments protein [Anabaena variabilis ATCC 29413]
gi|17130212|dbj|BAB72824.1| carbon dioxide concentrating mechanism protein [Nostoc sp. PCC
7120]
gi|75704393|gb|ABA24069.1| microcompartments protein [Anabaena variabilis ATCC 29413]
Length = 114
Score = 79.7 bits (195), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GMVET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVES 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
+ V G+++S H+I RPH +E +LP
Sbjct: 64 VKRVNGGQVLSTHIIARPHENLEYVLP 90
>gi|148239020|ref|YP_001224407.1| Carboxysome shell peptide, CsoS1 [Synechococcus sp. WH 7803]
gi|147847559|emb|CAK23110.1| Carboxysome shell peptide, CsoS1 [Synechococcus sp. WH 7803]
Length = 183
Score = 79.7 bits (195), Expect = 5e-14, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA VTLI +E VG G VTVMVRG+ GAV A+ AGA A
Sbjct: 90 ALGMIETRGMVPAIEAADAMTKAAEVTLISREYVGGGYVTVMVRGETGAVNASVRAGADA 149
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE L
Sbjct: 150 CERVGDGLVAAHIIARPHQEVEPAL 174
>gi|153955996|ref|YP_001396761.1| hypothetical protein CKL_3387 [Clostridium kluyveri DSM 555]
gi|146348854|gb|EDK35390.1| Hypothetical protein CKL_3387 [Clostridium kluyveri DSM 555]
Length = 90
Score = 79.7 bits (195), Expect = 5e-14, Method: Composition-based stats.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
+A ALGMVE +GL+GA+EAAD M+K +V L+G E+V AGL+TV ++GDVGAVK AT
Sbjct: 2 VAMGEALGMVEAKGLIGAMEAADEMLKNGDVKLLGYEKVSAGLITVKIKGDVGAVKVATQ 61
Query: 61 AGAAAAENVGELISVHVIPRPHAEVEVI 88
AGA AA+ VG+L++VHVIP P +V+ I
Sbjct: 62 AGAEAAKRVGQLLAVHVIPAPKIDVDKI 89
>gi|51246893|ref|YP_066777.1| similar to ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
gi|50877930|emb|CAG37770.1| related to ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
Length = 92
Score = 79.3 bits (194), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/86 (58%), Positives = 66/86 (76%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALG++E +G+ G IEAAD M KAA V L+ E++G G V V++RGDV A KAA DAGAA
Sbjct: 2 DALGILEAKGITGLIEAADVMTKAAQVELVSYERIGGGYVCVLIRGDVAACKAAIDAGAA 61
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA+ +G+LI+ HVIPRPH ++E I P
Sbjct: 62 AAKRMGKLIAAHVIPRPHQDLEEIFP 87
>gi|111026482|ref|YP_708765.1| hypothetical protein RHA1_ro10418 [Rhodococcus sp. RHA1]
gi|111026488|ref|YP_708771.1| hypothetical protein RHA1_ro10424 [Rhodococcus sp. RHA1]
gi|110825325|gb|ABH00607.1| conserved hypothetical protein [Rhodococcus sp. RHA1]
gi|110825331|gb|ABH00613.1| conserved hypothetical protein [Rhodococcus sp. RHA1]
Length = 93
Score = 79.3 bits (194), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 71/82 (86%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
++A+GM+ETRG V ++ AADAMVKAANVTLIG+ +VG GLV V++ GDVGAVKAAT+AG+
Sbjct: 2 SDAIGMIETRGYVASLAAADAMVKAANVTLIGRAEVGDGLVAVIINGDVGAVKAATEAGS 61
Query: 64 AAAENVGELISVHVIPRPHAEV 85
A +GEL+SVHVIPRPHA++
Sbjct: 62 ETAATIGELVSVHVIPRPHADL 83
>gi|3273486|gb|AAC24754.1| CsoS1C [Thiobacillus intermedius K12]
gi|4105524|gb|AAD02451.1| carboxysome structural polypeptide [Thiobacillus intermedius K12]
Length = 98
Score = 79.0 bits (193), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA+V LIG++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMCKAADVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHGEVEGILP 93
>gi|12597331|gb|AAG60043.1|AF307090_8 carboxysome structural peptide CsoS1B [Thiobacillus denitrificans]
Length = 124
Score = 79.0 bits (193), Expect = 8e-14, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 2 ANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDA 61
A ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA A
Sbjct: 16 ATGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRA 75
Query: 62 GAAAAENVGE-LISVHVIPRPHAEVEVILPHQ 92
GA A E VG+ L++ H+I R H EVE ILP +
Sbjct: 76 GADACERVGDGLVAAHIIARVHNEVEGILPTE 107
>gi|148380076|ref|YP_001254617.1| propanediol utilization protein [Clostridium botulinum A str.
ATCC 3502]
gi|153931614|ref|YP_001384373.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|153934555|ref|YP_001387910.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
gi|148289560|emb|CAL83661.1| propanediol utilization protein [Clostridium botulinum A str.
ATCC 3502]
gi|152927658|gb|ABS33158.1| bacterial microcompartments family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152930469|gb|ABS35968.1| bacterial microcompartments family protein [Clostridium botulinum
A str. Hall]
Length = 98
Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 64/80 (80%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET GLV A+EAAD M+KAANV LI E +G+ LVT+MV+GDVGAVK+A +AGA A
Sbjct: 8 ALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEA 67
Query: 66 AENVGELISVHVIPRPHAEV 85
A +G+L + +V+PRP EV
Sbjct: 68 ARAIGKLTAHNVMPRPIREV 87
>gi|3273488|gb|AAC24756.1| CsoS1B [Thiobacillus intermedius K12]
Length = 108
Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
AL ++ET GLV AIEAADAM KAA V LIG++ VG G VTV+VRGD GAV AA AGA A
Sbjct: 8 ALAIIETCGLVPAIEAADAMCKAAEVRLIGRQFVGGGYVTVLVRGDTGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQ 92
E VG+ L++VH+I R H EVE IL Q
Sbjct: 68 CERVGDGLVAVHIIARVHTEVEGILFDQ 95
>gi|88810435|ref|ZP_01125692.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
gi|88792065|gb|EAR23175.1| carboxysome shell peptide, CsoS1 [Nitrococcus mobilis Nb-231]
Length = 94
Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KA+ V LI +E VG G V+V+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKASEVRLISREFVGGGYVSVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH EVE +L
Sbjct: 69 CERVGDGLVAAHIIARPHREVEPVL 93
>gi|87312239|ref|ZP_01094340.1| probable ethanolamine utilization protein EutM [Blastopirellula
marina DSM 3645]
gi|87285064|gb|EAQ76997.1| probable ethanolamine utilization protein EutM [Blastopirellula
marina DSM 3645]
Length = 102
Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats.
Identities = 53/85 (62%), Positives = 69/85 (81%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ET+G + +EA DAM+KAANV +G ++VG+GLV+V V GDV AVKAATDAG AA
Sbjct: 7 ALGMIETKGFIALVEATDAMMKAANVKFVGWDKVGSGLVSVFVTGDVAAVKAATDAGVAA 66
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
A +GE++SV VIPRPH ++ V+LP
Sbjct: 67 AGRIGEVVSVQVIPRPHDDLTVVLP 91
>gi|150388101|ref|YP_001318150.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
gi|149947963|gb|ABR46491.1| microcompartments protein [Alkaliphilus metalliredigens QYMF]
Length = 206
Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 60/89 (67%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
NALG++ET G +I A DA +K ANVTL + G GLVT+MV GDV AV+AA +AG
Sbjct: 4 NALGLLETYGYTPSIVALDAALKTANVTLKDFQITGGGLVTMMVEGDVAAVQAAIEAGNI 63
Query: 65 AAENVGELISVHVIPRPHAEVEVILPHQE 93
AAE +G +IS HVIPRP ++ +L E
Sbjct: 64 AAETIGRVISQHVIPRPDIGLKSLLQSHE 92
>gi|153939632|ref|YP_001391415.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
gi|152935528|gb|ABS41026.1| bacterial microcompartments family protein [Clostridium botulinum
F str. Langeland]
Length = 98
Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 64/80 (80%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+VET GLV A+EAAD M+KAANV LI E +G+ LVT+MV+GDVGAVK+A +AGA A
Sbjct: 8 ALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEA 67
Query: 66 AENVGELISVHVIPRPHAEV 85
A +G+L + +V+PRP EV
Sbjct: 68 ARAIGKLTAHNVMPRPIREV 87
>gi|74318662|ref|YP_316402.1| Carboxysome structural peptide CsoS1B [Thiobacillus denitrificans
ATCC 25259]
gi|74058157|gb|AAZ98597.1| Carboxysome structural peptide CsoS1B [Thiobacillus denitrificans
ATCC 25259]
Length = 124
Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 2 ANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDA 61
A ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA A
Sbjct: 16 ATGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRA 75
Query: 62 GAAAAENVGE-LISVHVIPRPHAEVEVILPHQ 92
GA A E VG+ L++ H+I R H EVE ILP +
Sbjct: 76 GADACERVGDGLVAAHIIARVHNEVEGILPTE 107
>gi|67920777|ref|ZP_00514296.1| microcompartments protein [Crocosphaera watsonii WH 8501]
gi|67856894|gb|EAM52134.1| microcompartments protein [Crocosphaera watsonii WH 8501]
Length = 111
Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA-- 63
A+GMVET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG
Sbjct: 4 AVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGVDN 63
Query: 64 AAAENVGELISVHVIPRPHAEVEVILP 90
A N G+++S H+I RPH +E +LP
Sbjct: 64 AGRVNGGQVLSTHIIARPHENLEYVLP 90
>gi|86609254|ref|YP_478016.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557796|gb|ABD02753.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 113
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
A A+GM+ET G +EAADAMVKAA VTL+G E++ +G VTV+VRGDV V+A+ AG
Sbjct: 2 AIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGI 61
Query: 64 AAAENV--GELISVHVIPRPHAEVEVILP 90
+ + V G+L+S H+I RPH +E +LP
Sbjct: 62 DSVKRVNGGQLLSWHIIARPHENLEYVLP 90
>gi|119509594|ref|ZP_01628741.1| microcompartments protein [Nodularia spumigena CCY9414]
gi|119465783|gb|EAW46673.1| microcompartments protein [Nodularia spumigena CCY9414]
Length = 102
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+ VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVSAGVEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ARRVNGGEVLSTHIIARPHENLEYVLP 90
>gi|3282392|gb|AAC24976.1| carboxysome shell peptide CsoS1B [Thiobacillus denitrificans]
Length = 122
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 2 ANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDA 61
A ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA A
Sbjct: 14 ATGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRA 73
Query: 62 GAAAAENVGE-LISVHVIPRPHAEVEVILPHQ 92
GA A E VG+ L++ H+I R H EVE ILP +
Sbjct: 74 GADACERVGDGLVAAHIIARVHNEVEGILPTE 105
>gi|86606273|ref|YP_475036.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-3-3Ab]
gi|86554815|gb|ABC99773.1| carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. JA-3-3Ab]
Length = 113
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
A A+GM+ET G +EAADAMVKAA VTL+G E++ +G VTV+VRGDV V+A+ AG
Sbjct: 2 AIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGI 61
Query: 64 AAAENV--GELISVHVIPRPHAEVEVILP 90
+ + V G+L+S H+I RPH +E +LP
Sbjct: 62 ESVKRVNGGQLLSWHIIARPHENLEYVLP 90
>gi|4836667|gb|AAD30515.1|AF129925_9 CsoS1A [Acidithiobacillus ferrooxidans]
Length = 100
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+G++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 10 ALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 69
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 70 CERVGDGLVAAHIIARVHSEVENILP 95
>gi|126657858|ref|ZP_01729011.1| carbon dioxide concentrating mechanism protein; CcmK [Cyanothece
sp. CCY0110]
gi|126620798|gb|EAZ91514.1| carbon dioxide concentrating mechanism protein; CcmK [Cyanothece
sp. CCY0110]
Length = 111
Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA-- 63
A+GMVET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG
Sbjct: 4 AVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIDN 63
Query: 64 AAAENVGELISVHVIPRPHAEVEVILP 90
A N G+++S H+I RPH +E +LP
Sbjct: 64 AGRVNGGQVLSTHIIARPHENLEYVLP 90
>gi|89897740|ref|YP_521227.1| hypothetical protein DSY4994 [Desulfitobacterium hafniense Y51]
gi|89337188|dbj|BAE86783.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 183
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ETRGL+ AIE AD M+K A V L+G++ VG GLVT+ V GDVGAVKAA +AGAAA
Sbjct: 3 ALGLIETRGLLPAIECADVMLKTAQVELVGRDFVGGGLVTISVTGDVGAVKAAVEAGAAA 62
Query: 66 AENVGE--LISVHVIPRPHAEVE 86
E + L+S HVIPRPH E+E
Sbjct: 63 VEKISPLLLVSQHVIPRPHQEIE 85
>gi|109647945|ref|ZP_01371848.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|109641035|gb|EAT50590.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 183
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ETRGL+ AIE AD M+K A V L+G++ VG GLVT+ V GDVGAVKAA +AGAAA
Sbjct: 3 ALGLIETRGLLPAIECADVMLKTAQVELVGRDFVGGGLVTISVTGDVGAVKAAVEAGAAA 62
Query: 66 AENVGE--LISVHVIPRPHAEVE 86
E + L+S HVIPRPH E+E
Sbjct: 63 VEKISPLLLVSQHVIPRPHQEIE 85
>gi|56750144|ref|YP_170845.1| putative carboxysome assembly protein [Synechococcus elongatus
PCC 6301]
gi|81300230|ref|YP_400438.1| putative carboxysome assembly protein [Synechococcus elongatus
PCC 7942]
gi|416773|sp|Q03511|CCMK_SYNP7 Carbon dioxide concentrating mechanism protein ccmK (Carboxysome
shell protein csoS1)
gi|154498|gb|AAA27304.1| carbon dioxide concentrating mechanism protein
gi|56685103|dbj|BAD78325.1| putative carboxysome assembly protein [Synechococcus elongatus
PCC 6301]
gi|81169111|gb|ABB57451.1| putative carboxysome assembly protein [Synechococcus elongatus
PCC 7942]
Length = 102
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG +
Sbjct: 4 AVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGLDS 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVAGGEVLSHHIIARPHENLEYVLP 90
>gi|23128652|ref|ZP_00110492.1| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Nostoc punctiforme PCC 73102]
Length = 102
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+ VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGVEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A+ V GE++S H+I RPH +E +LP
Sbjct: 64 AKRVFGGEVLSTHIIARPHENLEYVLP 90
>gi|114330820|ref|YP_747042.1| microcompartments protein [Nitrosomonas eutropha C91]
gi|114307834|gb|ABI59077.1| microcompartments protein [Nitrosomonas eutropha C91]
Length = 98
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI ++ VG G VTVMVRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVMVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVEGILP 93
>gi|126651148|ref|ZP_01723358.1| ethanolamine utilization protein, putative [Bacillus sp. B14905]
gi|126591986|gb|EAZ86052.1| ethanolamine utilization protein, putative [Bacillus sp. B14905]
Length = 122
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 69/82 (84%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
++A+GM+ET+GLVG+ EAADAM+K+++VT++ +E V G+VTV+V+GDVG+V+AA +AG
Sbjct: 2 SSAIGMIETKGLVGSYEAADAMIKSSDVTIVKQEFVDGGIVTVVVKGDVGSVQAAVEAGK 61
Query: 64 AAAENVGELISVHVIPRPHAEV 85
AAA VGEL+ HVIPRP EV
Sbjct: 62 AAAMRVGELLGAHVIPRPDDEV 83
>gi|16329367|ref|NP_440095.1| carbon dioxide concentrating mechanism protein; CcmK
[Synechocystis sp. PCC 6803]
gi|2493552|sp|P72760|CCMK1_SYNY3 Carbon dioxide concentrating mechanism protein ccmK homolog 1
gi|1651848|dbj|BAA16775.1| carbon dioxide concentrating mechanism protein; CcmK
[Synechocystis sp. PCC 6803]
Length = 111
Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET G +EAAD+MVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG
Sbjct: 4 AVGMIETLGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVTAGIEN 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
V GE++S H+I RPH +E +LP
Sbjct: 64 IRRVNGGEVLSNHIIARPHENLEYVLP 90
>gi|89897755|ref|YP_521242.1| hypothetical protein DSY5009 [Desulfitobacterium hafniense Y51]
gi|109647931|ref|ZP_01371834.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
gi|89337203|dbj|BAE86798.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109641021|gb|EAT50576.1| microcompartments protein [Desulfitobacterium hafniense DCB-2]
Length = 98
Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/88 (55%), Positives = 66/88 (75%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ETRG+V AIEAAD M K A+V L+ E +G+GLVTVMV+GDV AV++A + GAAA
Sbjct: 8 ALGLIETRGMVPAIEAADVMCKTADVVLVSYENIGSGLVTVMVKGDVAAVRSAVEKGAAA 67
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
A +GEL + HV+PRP + V I+ +
Sbjct: 68 AAAIGELTAAHVMPRPVSRVGKIVSRHD 95
>gi|37521664|ref|NP_925041.1| carbon dioxide concentrating mechanism protein CcmK homolog
[Gloeobacter violaceus PCC 7421]
gi|35212662|dbj|BAC90036.1| ccmK [Gloeobacter violaceus PCC 7421]
Length = 113
Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
A A+GM+ET G +EAADAMVKAA VTL+G E++ +G VTV+VRGDV V+A+ AG
Sbjct: 2 AVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGI 61
Query: 64 AAAENV--GELISVHVIPRPHAEVEVILP 90
+ + V G+L+S H+I RPH +E +LP
Sbjct: 62 ESIKRVYGGQLLSHHIIARPHENLEYVLP 90
>gi|1169109|sp|P45689|CSOA_THINE Major carboxysome shell protein 1A
gi|119389372|pdb|2EWH|A Chain A, Carboxysome Protein Csos1a From Halothiobacillus
Neapolitanus
gi|134104305|pdb|2G13|A Chain A, Csos1a With Sulfate Ion
gi|3449373|gb|AAC32556.1| carboxysome shell polypeptide [Halothiobacillus neapolitanus]
Length = 98
Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+G++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVENILP 93
>gi|90422677|ref|YP_531047.1| microcompartments protein [Rhodopseudomonas palustris BisB18]
gi|90104691|gb|ABD86728.1| microcompartments protein [Rhodopseudomonas palustris BisB18]
Length = 97
Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGMVET+GLV AIEAADAMVK+ANV LIG E++G+GLVTVMVRGDVGAVKAATDAGA A
Sbjct: 5 ALGMVETKGLVAAIEAADAMVKSANVALIGYEKIGSGLVTVMVRGDVGAVKAATDAGAVA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPH 91
A VGE++SVHV+PRPH+EVE ILPH
Sbjct: 65 AAKVGEVVSVHVVPRPHSEVEKILPH 90
>gi|85715082|ref|ZP_01046066.1| Carboxysome structural polypeptide [Nitrobacter sp. Nb-311A]
gi|85697997|gb|EAQ35870.1| Carboxysome structural polypeptide [Nitrobacter sp. Nb-311A]
Length = 98
Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI ++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVEGILP 93
>gi|4836666|gb|AAD30514.1|AF129925_8 CsoS1C [Acidithiobacillus ferrooxidans]
Length = 98
Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV A+EAADAM KAA V L+G++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAVEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVENILP 93
>gi|75676171|ref|YP_318592.1| Carboxysome structural polypeptide [Nitrobacter winogradskyi
Nb-255]
gi|74421041|gb|ABA05240.1| Carboxysome structural polypeptide [Nitrobacter winogradskyi
Nb-255]
Length = 98
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI ++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVEGILP 93
>gi|82799296|gb|ABB92222.1| carbon dioxide concentrating mechanism protein CcmK [uncultured
marine type-A Synechococcus 5B2]
gi|90655547|gb|ABD96385.1| possible carbon dioxide concentrating mechanism protein CcmK
[uncultured marine type-A Synechococcus GOM 4N23]
Length = 204
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA VTLI +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 111 ALGMIETRGMVPAIEAADAMTKAAEVTLICREYVGGGYVTVMVRGETGAVNAAVRAGADA 170
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RPH E+E L
Sbjct: 171 CERVGDGLVAAHIIARPHQELEPAL 195
>gi|124022524|ref|YP_001016831.1| hypothetical protein P9303_08151 [Prochlorococcus marinus str.
MIT 9303]
gi|123962810|gb|ABM77566.1| Hypothetical protein P9303_08151 [Prochlorococcus marinus str.
MIT 9303]
Length = 91
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 MVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAAAEN 68
M+ETRG+V AIEAADAM KAA V LI +E VG G VTVMVRG+ GAV AA AGA A E
Sbjct: 1 MIETRGMVPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAVNAAVRAGADACER 60
Query: 69 VGE-LISVHVIPRPHAEVEVIL 89
VG+ L++ H+I RPH EVE L
Sbjct: 61 VGDGLVAAHIIARPHQEVEPAL 82
>gi|134301115|ref|YP_001114611.1| microcompartments protein [Desulfotomaculum reducens MI-1]
gi|134053815|gb|ABO51786.1| microcompartments protein [Desulfotomaculum reducens MI-1]
Length = 99
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 66/88 (75%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ETRG+V AI AAD M K A+VTL+ E +G+ LVTVMV+GDV AV++A ++GAAA
Sbjct: 8 ALGLIETRGMVPAIYAADVMCKTADVTLVSYENIGSTLVTVMVKGDVAAVRSAVESGAAA 67
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
A +GEL + HV+PRP + V I+ +
Sbjct: 68 AAAIGELTAAHVMPRPISRVGKIVSKHD 95
>gi|78358324|ref|YP_389773.1| carbon dioxide concentrating mechanism protein (PduA
related)-like [Desulfovibrio desulfuricans G20]
gi|78220729|gb|ABB40078.1| carbon dioxide concentrating mechanism protein (PduA
related)-like [Desulfovibrio desulfuricans G20]
Length = 208
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 60/76 (78%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++ET G+V AI AD+M+KAANV LI E VG+ LVTVMV+GDV AV+A+ DAG+ A
Sbjct: 12 ALGLIETLGMVPAIYGADSMLKAANVQLISYENVGSTLVTVMVKGDVAAVQASVDAGSVA 71
Query: 66 AENVGELISVHVIPRP 81
A +G+L + +V+PRP
Sbjct: 72 AAGIGKLTAHNVMPRP 87
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+G++ET G+V +EAADAM+K A+V LIG E V +G ++V+V+GDV A +AA AG A
Sbjct: 114 AMGLIETFGIVYVLEAADAMLKTADVELIGYENVASGYISVLVQGDVAACQAAVAAGVKA 173
Query: 66 AENVG-ELISVHVIPRPHAEVEVI 88
+ +G ++ S VIP PH +V I
Sbjct: 174 VQAMGTDVYSSVVIPTPHPDVAKI 197
>gi|51246882|ref|YP_066766.1| ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
gi|50877919|emb|CAG37759.1| probable ethanolamine utilization protein (EutM) [Desulfotalea
psychrophila LSv54]
Length = 92
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 66/86 (76%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALG++E +G+ G ++AAD M KAA V L+ E++G G V V++RGDV A KAA DAGAA
Sbjct: 2 DALGILEAKGITGLVDAADVMTKAAQVELVSYERIGGGYVCVLIRGDVAACKAAIDAGAA 61
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
AA+ +G+LI+ HVIPRPH ++E + P
Sbjct: 62 AAKRMGKLIAAHVIPRPHQDLEEVYP 87
>gi|124263044|ref|YP_001023514.1| Propanediol utilization [Methylibium petroleiphilum PM1]
gi|124262290|gb|ABM97279.1| Propanediol utilization [Methylibium petroleiphilum PM1]
Length = 100
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/86 (62%), Positives = 67/86 (77%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
+ALG VET+G A AADAMVKAANV L+ +Q G G++T++VRGDVGAVKAA DAG
Sbjct: 9 GSALGFVETQGKTAATLAADAMVKAANVRLLTMQQPGGGIITIIVRGDVGAVKAAVDAGE 68
Query: 64 AAAENVGELISVHVIPRPHAEVEVIL 89
AAA+ VG++ S HVIPRPH +VE +L
Sbjct: 69 AAAKVVGKVRSAHVIPRPHDDVEDLL 94
>gi|113477305|ref|YP_723366.1| microcompartments protein [Trichodesmium erythraeum IMS101]
gi|110168353|gb|ABG52893.1| microcompartments protein [Trichodesmium erythraeum IMS101]
Length = 112
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GMVET G +EAADAMVKAA VTL+G E++G+G VTV++RGDV V+A+ AG
Sbjct: 4 AVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAGVDN 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
V G+++S H+I RPH +E +LP
Sbjct: 64 VRRVNGGQVMSTHIIARPHENLEYVLP 90
>gi|106893699|ref|ZP_01360823.1| similar to carbon dioxide concentrating mechanism protein (PduA
related) [Clostridium sp. OhILAs]
gi|106774919|gb|EAT31479.1| similar to carbon dioxide concentrating mechanism protein (PduA
related) [Clostridium sp. OhILAs]
Length = 100
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 MANANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATD 60
M ALG++ET G+V +EAADAM K+A+V LIG E V +G ++V+VRGDVGA KAA +
Sbjct: 1 MNTYKALGLIETFGIVYVLEAADAMCKSADVELIGFENVASGYISVLVRGDVGACKAAVE 60
Query: 61 AGAAAAENVG-ELISVHVIPRPHAEVEVIL 89
+G A +N+G E+ S VI PH ++E I+
Sbjct: 61 SGVQAVKNMGSEVYSSVVIASPHHDIEKII 90
>gi|116072228|ref|ZP_01469495.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. BL107]
gi|116064750|gb|EAU70509.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. BL107]
Length = 174
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+L+ +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 81 ALGMIETRGMVPAIEAADAMTKAAEVSLVCREYVGGGYVTVMVRGETGAVNAAVRAGADA 140
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RP+ VE L
Sbjct: 141 CERVGDGLVAAHIIARPNDGVEPAL 165
>gi|17228363|ref|NP_484911.1| carbon dioxide concentrating mechanism protein [Nostoc sp. PCC
7120]
gi|75910669|ref|YP_324965.1| microcompartments protein [Anabaena variabilis ATCC 29413]
gi|17130213|dbj|BAB72825.1| carbon dioxide concentrating mechanism protein [Nostoc sp. PCC
7120]
gi|75704394|gb|ABA24070.1| microcompartments protein [Anabaena variabilis ATCC 29413]
Length = 102
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET+G +EAADAMVKAA VTL+G E++G+ VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
A V GE++S H+I RPH +E +LP
Sbjct: 64 ARRVNGGEVVSTHIIARPHENLEYVLP 90
>gi|22298489|ref|NP_681736.1| carbon dioxide concentrating mechanism protein
[Thermosynechococcus elongatus BP-1]
gi|22294669|dbj|BAC08498.1| carbon dioxide concentrating mechanism protein
[Thermosynechococcus elongatus BP-1]
Length = 113
Score = 75.9 bits (185), Expect = 7e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 4 ANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGA 63
A A+GM+ET G +EAADAMVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG
Sbjct: 2 AIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGV 61
Query: 64 AAAENV--GELISVHVIPRPHAEVEVILP 90
+ V G+++S H+I RPH +E +LP
Sbjct: 62 ENVKRVNGGQVLSTHIIARPHENLEYVLP 90
>gi|78185175|ref|YP_377610.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9902]
gi|78169469|gb|ABB26566.1| possible carbon dioxide concentrating mechanism protein CcmK
[Synechococcus sp. CC9902]
Length = 174
Score = 75.9 bits (185), Expect = 8e-13, Method: Composition-based stats.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRG+V AIEAADAM KAA V+L+ +E VG G VTVMVRG+ GAV AA AGA A
Sbjct: 81 ALGMIETRGMVPAIEAADAMTKAAEVSLVCREYVGGGYVTVMVRGETGAVNAAVRAGADA 140
Query: 66 AENVGE-LISVHVIPRPHAEVEVIL 89
E VG+ L++ H+I RP+ VE L
Sbjct: 141 CERVGDGLVAAHIIARPNDGVEPAL 165
>gi|1169111|sp|P45688|CSOC_THINE Major carboxysome shell protein 1C
gi|3449372|gb|AAC32555.1| carboxysome shell polypeptide [Halothiobacillus neapolitanus]
Length = 98
Score = 75.5 bits (184), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V L+G++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 8 ALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 67
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 68 CERVGDGLVAAHIIARVHSEVENILP 93
>gi|12597330|gb|AAG60042.1|AF307090_7 carboxysome structural peptide CsoS1A [Thiobacillus
denitrificans]
gi|3282391|gb|AAC24975.1| carboxysome shell peptide CsoS1A [Thiobacillus denitrificans]
Length = 101
Score = 75.5 bits (184), Expect = 9e-13, Method: Composition-based stats.
Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQE 93
E VG+ L++ H+I R H+EVE ILP E
Sbjct: 69 CERVGDGLVAAHIIARVHSEVENILPTVE 97
>gi|119488744|ref|ZP_01621753.1| carbon dioxide concentrating mechanism protein; CcmK [Lyngbya sp.
PCC 8106]
gi|119455167|gb|EAW36308.1| carbon dioxide concentrating mechanism protein; CcmK [Lyngbya sp.
PCC 8106]
Length = 103
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+GM+ET G +EAAD+MVKAA VTL+G E++G+G VTV+VRGDV V+A+ AG A
Sbjct: 4 AVGMIETIGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGIEA 63
Query: 66 AENV--GELISVHVIPRPHAEVEVILP 90
+ V GE+ S H+I RPH +E +LP
Sbjct: 64 VKRVNGGEVSSTHIIARPHENLEYVLP 90
>gi|74318663|ref|YP_316403.1| carboxysome shell protein CsoS1A [Thiobacillus denitrificans ATCC
25259]
gi|74058158|gb|AAZ98598.1| carboxysome shell protein CsoS1A [Thiobacillus denitrificans ATCC
25259]
Length = 101
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILPHQE 93
E VG+ L++ H+I R H+EVE ILP E
Sbjct: 69 CERVGDGLVAAHIIARVHSEVENILPTAE 97
>gi|92109477|ref|YP_571765.1| carboxysome structural polypeptide [Nitrobacter hamburgensis X14]
gi|91802559|gb|ABE64933.1| carboxysome structural polypeptide [Nitrobacter hamburgensis X14]
Length = 99
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LI ++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H+EVE ILP
Sbjct: 69 CERVGDGLVAAHIIARVHSEVEGILP 94
>gi|113477300|ref|YP_723361.1| microcompartments protein [Trichodesmium erythraeum IMS101]
gi|110168348|gb|ABG52888.1| microcompartments protein [Trichodesmium erythraeum IMS101]
Length = 258
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+V TR + AD M+K++ V L+G E++G+G T +VRG + V+ A ++GA
Sbjct: 23 ALGLVTTRSFPAIVGTADMMLKSSGVILVGYEKIGSGYCTAVVRGGIADVRLAVESGAKT 82
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE G+LIS VIPRP +EV+LP
Sbjct: 83 AEKFGQLISKTVIPRPLPNLEVVLP 107
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 53/85 (62%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+G++ETRG + A DAM+K+A+V L + GAGL T +VRG V V A + G
Sbjct: 128 AVGLIETRGFPAMVGACDAMLKSADVQLTAYQTTGAGLCTAIVRGSVSNVAVAIETGMYE 187
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE +GEL +V VIPR ++E LP
Sbjct: 188 AERIGELNAVMVIPRALDDLEKTLP 212
>gi|153174247|ref|ZP_01929786.1| hypothetical protein LMIG_02499 [Listeria monocytogenes FSL
N3-165]
gi|133730445|gb|EBA32143.1| hypothetical protein LMIG_02499 [Listeria monocytogenes FSL
N3-165]
Length = 173
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++E G +GA+ AAD +KAANV LI E + GL TV + GDVGAV AA +AG AA
Sbjct: 5 ALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
E++G L+S HVI R + + + QE
Sbjct: 65 TEDLGCLVSSHVIARMSEDTKALFVPQE 92
>gi|74318664|ref|YP_316404.1| carboxysome shell protein, CsoS1C [Thiobacillus denitrificans
ATCC 25259]
gi|12597329|gb|AAG60041.1|AF307090_6 carboxysome structural peptide CsoS1C [Thiobacillus
denitrificans]
gi|3282390|gb|AAC24974.1| carboxysome shell peptide CsoS1C [Thiobacillus denitrificans]
gi|74058159|gb|AAZ98599.1| carboxysome shell protein, CsoS1C [Thiobacillus denitrificans
ATCC 25259]
Length = 99
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETRGLV AIEAADAM KAA V LIG++ VG G VTV+VRG+ GAV AA AGA A
Sbjct: 9 ALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADA 68
Query: 66 AENVGE-LISVHVIPRPHAEVEVILP 90
E VG+ L++ H+I R H EVE ILP
Sbjct: 69 CERVGDGLVAAHIIARVHNEVENILP 94
>gi|149176729|ref|ZP_01855340.1| hypothetical protein PM8797T_14781 [Planctomyces maris DSM 8797]
gi|148844370|gb|EDL58722.1| hypothetical protein PM8797T_14781 [Planctomyces maris DSM 8797]
Length = 130
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/79 (55%), Positives = 64/79 (81%)
Query: 3 NANALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAG 62
++ A+G++ET+GLV IEA+DAM+KAANVTL+ + Q+G +T +++GD+G+V+AA DAG
Sbjct: 43 SSEAIGLIETKGLVAQIEASDAMLKAANVTLVDQIQIGGAYITTVIQGDIGSVRAAVDAG 102
Query: 63 AAAAENVGELISVHVIPRP 81
AAAA +GEL+ HVI RP
Sbjct: 103 AAAASQIGELVGAHVIARP 121
>gi|106893957|ref|ZP_01361080.1| microcompartments protein [Clostridium sp. OhILAs]
gi|106774758|gb|EAT31319.1| microcompartments protein [Clostridium sp. OhILAs]
Length = 88
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 63/84 (75%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALGM+ETR LV AIEAAD MVK+A+V ++ VG+G+++V+V G+V AV+AA G A
Sbjct: 5 ALGMIETRSLVAAIEAADTMVKSADVKIVDLNYVGSGIISVIVSGEVAAVQAAVSNGTEA 64
Query: 66 AENVGELISVHVIPRPHAEVEVIL 89
+ +GE+IS +VIPRPH EV IL
Sbjct: 65 VKGIGEIISTNVIPRPHDEVSKIL 88
>gi|37521660|ref|NP_925037.1| carbon dioxide concentrating mechanism protein [Gloeobacter
violaceus PCC 7421]
gi|35212658|dbj|BAC90032.1| carbon dioxide concentrating mechanism protein [Gloeobacter
violaceus PCC 7421]
Length = 245
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+G++ETRG + A++ M++AA V LIG E++GAGL TV+++G V V A DAG
Sbjct: 126 AIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIGAGLCTVIIQGHVADVIYAIDAGMKE 185
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE +GEL +V VIPRP E+E LP
Sbjct: 186 AERIGELHAVMVIPRPLDELEQSLP 210
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 5 NALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAA 64
+ALG+V T + ADAM+K+A V LIG E+VG G T +VRG V+ A +AG
Sbjct: 20 SALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCTAVVRGKTSDVRLAVEAGVQ 79
Query: 65 AAENVGELISVHVIPRPHAEVEVILP 90
A+ G+L+S +IPRP A +E +LP
Sbjct: 80 TAKEFGQLVSSSIIPRPLANLEAVLP 105
>gi|26250352|ref|NP_756392.1| hypothetical protein c4532 [Escherichia coli CFT073]
gi|26110782|gb|AAN82966.1|AE016769_81 Hypothetical protein c4532 [Escherichia coli CFT073]
Length = 83
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/46 (80%), Positives = 43/46 (93%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGD 51
ALGMVET+GLV AIEAAD MVK+ANVTL+G E++G+GLVTVMVRGD
Sbjct: 22 ALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGD 67
>gi|53688425|ref|ZP_00110497.2| COG4577: Carbon dioxide concentrating mechanism/carboxysome shell
protein [Nostoc punctiforme PCC 73102]
Length = 265
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG+V TR + AD M+K+A V L+G E++G G T +VRG + V+ A ++G
Sbjct: 25 ALGLVSTRSFPAIVGTADMMLKSAGVHLVGYEKIGGGYCTAIVRGGIADVRLAVESGVQT 84
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE G+L+S VIPRP+ ++++LP
Sbjct: 85 AEQFGQLVSSLVIPRPYPNLDIVLP 109
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
A+G+VETRG + A DAM+KAA+V L E++G GL T ++RG V V A +AG
Sbjct: 130 AIGLVETRGFPAMVGACDAMLKAADVHLAAYEKIGGGLCTAIIRGSVANVAVAVEAGMFE 189
Query: 66 AENVGELISVHVIPRPHAEVEVILP 90
AE +GEL +V VIPRP E+E LP
Sbjct: 190 AERIGELNAVMVIPRPLDEMEQTLP 214
>gi|153195955|ref|ZP_01940363.1| hypothetical protein LMRG_00624 [Listeria monocytogenes 10403S]
gi|127634237|gb|EBA23623.1| hypothetical protein LMRG_00624 [Listeria monocytogenes 10403S]
Length = 173
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 6 ALGMVETRGLVGAIEAADAMVKAANVTLIGKEQVGAGLVTVMVRGDVGAVKAATDAGAAA 65
ALG++E G +GA+ AAD +KAANV LI E + GL TV + GDVGAV AA +AG AA
Sbjct: 5 ALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAA 64
Query: 66 AENVGELISVHVIPRPHAEVEVILPHQE 93
E++G L+S HVI R + + + QE
Sbjct: 65 TEDLGCLVSSHVIARMSEDTKALFVPQE 92
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.314 0.129 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,209,482
Number of Sequences: 5470121
Number of extensions: 9164513
Number of successful extensions: 29981
Number of sequences better than 1.0e-05: 397
Number of HSP's better than 0.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 29422
Number of HSP's gapped (non-prelim): 438
length of query: 93
length of database: 1,894,087,724
effective HSP length: 63
effective length of query: 30
effective length of database: 1,549,470,101
effective search space: 46484103030
effective search space used: 46484103030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 124 (52.4 bits)