R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 798 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|5882739|gb|AAD55292.1|AC008263_23 (AC008263) Contains PF|00249 Myb-like
DNA-binding domain. EST gb|Z18152 comes from this gene.
[Arabidopsis thaliana] >gi|12323911|gb|AAG51937.1|AC013258_31
(AC013258) putative MYB family transcription factor; 86049-87165
[Arabidopsis thaliana]
Length = 265
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 413 (145.4 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 88/144 (61%), Positives = 104/144 (72%), Frame = +2
Query: 98 DPTMSRASSAASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPLDATTTNN-NKDA----- 259
+ T + A S EIMLFGVRVV+D MRK VS+NNLS YE + + ++D
Sbjct: 10 ESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNK 69
Query: 260 VAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKT 439
AGYASAD+A P +S + ERKRGVPWTEEEHKLFL+GLQ+VGKGDW+GIS+N+VKT
Sbjct: 70 TPAGYASADEALPMSSSNGKI-ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKT 128
Query: 440 RTPTQVASHAQKYFLRRSKKYFLRR 514
RT TQVASHAQKYFLRRS RR
Sbjct: 129 RTSTQVASHAQKYFLRRSNLNRRRR 153
Score = 389 (136.9 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 86/140 (61%), Positives = 102/140 (72%), Frame = +2
Query: 98 DPTMSRASSAASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPLDATTTNN-NKDA----- 259
+ T + A S EIMLFGVRVV+D MRK VS+NNLS YE + + ++D
Sbjct: 10 ESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNK 69
Query: 260 VAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKT 439
AGYASAD+A P +S + ERKRGVPWTEEEHKLFL+GLQ+VGKGDW+GIS+N+VKT
Sbjct: 70 TPAGYASADEALPMSSSNGKI-ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKT 128
Query: 440 RTPTQVASHAQKYFLRRSKKYFLRRS 517
RT TQVASHAQKYFLRRS
Sbjct: 129 RTSTQVASHAQKYFLRRS-------- 146
>gi|2194137|gb|AAB61112.1| (AC002062) ESTs gb|R29947,gb|H76702 come from this
gene. [Arabidopsis thaliana]
Length = 261
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 376 (132.4 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 89/147 (60%), Positives = 102/147 (69%), Frame = +2
Query: 74 HTQPAPPPDPTMSRASS-AASGE--IMLFGVRVVVDS---MRKSVSMNNLSQYEHPLDAT 235
H P D T + ++ GE IMLFGVRV S RKSVSMNNLSQ++ D
Sbjct: 13 HNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMNNLSQFDQTPDPN 72
Query: 236 TTNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRG 415
T++ GYAS DD SGR+RER KRG PWTEEEH+LFL GL KVGKGDWRG
Sbjct: 73 PTDDG------GYAS-DDVV-HASGRNRER--KRGTPWTEEEHRLFLTGLHKVGKGDWRG 122
Query: 416 ISKNYVKTRTPTQVASHAQKYFLRRSKKYFLRR 514
IS+N+VKTRTPTQVASHAQKYFLRR+ + RR
Sbjct: 123 ISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRR 155
Score = 301 (106.0 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 80/148 (54%), Positives = 90/148 (60%), Frame = +2
Query: 74 HTQPAPPPDPTMSRASS-AASGE--IMLFGVRVVVDSMRKSVSMNNLSQYE-HPLDATTT 241
H P D T + ++ GE IMLFGVRV S S ++S D T
Sbjct: 13 HNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEAS--SSCFRKSVSMNNLSQFDQTPD 70
Query: 242 NNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGIS 421
N D GYAS DD SGR+RER KRG PWTEEEH+LFL GL KVGKGDWRGIS
Sbjct: 71 PNPTDD--GGYAS-DDVV-HASGRNRER--KRGTPWTEEEHRLFLTGLHKVGKGDWRGIS 124
Query: 422 KNYVKTRTPTQVASHAQKYFLRRSKKYFLRRS 517
+N+VKTRTPTQVASHAQKYFLRR+
Sbjct: 125 RNFVKTRTPTQVASHAQKYFLRRT-------- 148
>gi|8778292|gb|AAF79301.1|AC068602_24 (AC068602) F14D16.15 [Arabidopsis
thaliana]
Length = 285
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | | | 285
0 50 100 150 200 250
Plus Strand HSPs:
Score = 373 (131.3 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 88/139 (63%), Positives = 97/139 (69%), Frame = +2
Query: 137 EIMLFGVRVVVDSMRKSVSMNNLSQYEH--PLDA----TTTN-------NNKDA---VAA 268
EIMLFGVRVVVD MRK VS+NNLS YE P D T N DA VA
Sbjct: 21 EIMLFGVRVVVDPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAGDGEDKNETDATVIVAD 80
Query: 269 GYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTP 448
GYASA+DA +S RKRGVPWTE EHK FL+GLQKVGKGDW+GIS+N+VK+RTP
Sbjct: 81 GYASANDAVQISSS---SGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTP 137
Query: 449 TQVASHAQKYFLRRSKKYFLRR 514
TQVASHAQKYFLRR+ RR
Sbjct: 138 TQVASHAQKYFLRRTNLNRRRR 159
>gi|8809622|dbj|BAA97173.1| (AB018117) Myb-related transcription activator-like
[Arabidopsis thaliana]
Length = 365
Frame 2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 365
0 150 300
Plus Strand HSPs:
Score = 339 (119.3 bits), Expect = 8.9e-30, P = 8.9e-30
Identities = 74/124 (59%), Positives = 88/124 (70%), Frame = +2
Query: 140 IMLFGVRVVVDSMRKSVSMNNLSQYE------HPLDATTTNNNKDA---VAA-GYASADD 289
+ LFGVR+ S+RKS SM NLS Y H + T + D VA GYAS D
Sbjct: 23 VKLFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDF 82
Query: 290 AAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHA 469
A +S R ERK+G PWTEEEH++FL+GLQK+GKGDWRGIS+NYV TRTPTQVASHA
Sbjct: 83 VAGSSSSR----ERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHA 138
Query: 470 QKYFLRRS 493
QKYF+R+S
Sbjct: 139 QKYFIRQS 146
>gi|2062176|gb|AAB63650.1| (AC001645) Myb-related transcription activator
(MybSt1) isolog [Arabidopsis thaliana] >gi|9279717|dbj|BAB01274.1|
(AB023046) Myb-related transcription activator [Arabidopsis
thaliana]
Length = 369
Frame 2 hits (HSPs): ____________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 369
0 150 300
Plus Strand HSPs:
Score = 301 (106.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 60/83 (72%), Positives = 66/83 (79%), Frame = +2
Query: 269 GYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTP 448
GY S DD A + HR ERKRGVPWTEEEH+LFLVGLQK+GKGDWRGIS+NYV +RTP
Sbjct: 96 GYLS-DDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTP 154
Query: 449 TQVASHAQKYFLRR-SKKYFLRRS 517
TQVASHAQKYF+R S RRS
Sbjct: 155 TQVASHAQKYFIRHTSSSRRKRRS 178
Score = 40 (14.1 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 8/21 (38%), Positives = 12/21 (57%), Frame = +1
Query: 19 LSPSHALASTRTDSDPPESHS 81
LSPS LA++ + P H+
Sbjct: 66 LSPSSPLATSNLNDSPLSDHA 86
>gi|7705206|gb|AAB32591.2| (S74753) MybSt1 [Solanum tuberosum]
Length = 342
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 342
0 150 300
Plus Strand HSPs:
Score = 322 (113.3 bits), Expect = 5.6e-28, P = 5.6e-28
Identities = 68/130 (52%), Positives = 89/130 (68%), Frame = +2
Query: 140 IMLFGVRVVVDSMRKSVSMNNLSQYEH-------PLDAT---TTNNNKDAVAAGYASADD 289
+ LFGVR+ +RKS SM NL+ + PL+ + + D A G SAD
Sbjct: 23 VKLFGVRLTDGLIRKSASMGNLTHFASGSGGGSTPLNGVVHDSPGDTPDHPAVGGGSADG 82
Query: 290 AAPQN--SGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVAS 463
A ++ +G RERK+GVPWTEEEH++FL+GLQK+GKGDWRGI++NYV +RTPTQVAS
Sbjct: 83 YASEDFVAGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVAS 142
Query: 464 HAQKYFLRRS 493
HAQKYF+R+S
Sbjct: 143 HAQKYFIRQS 152
>gi|1076660|pir||S51839 D13F(MYBST1) protein - potato
Length = 342
Frame 2 hits (HSPs): ____________________
Annotated Domains: __________
__________________________________________________
Database sequence: | | | | 342
0 150 300
__________________
Annotated Domains:
DOMO DM00052: MYBDNA-BINDINGREPEAT 88..148
__________________
Plus Strand HSPs:
Score = 315 (110.9 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 67/130 (51%), Positives = 88/130 (67%), Frame = +2
Query: 140 IMLFGVRVVVDSMRKSVSMNNLSQYEH-------PLDAT---TTNNNKDAVAAGYASADD 289
+ LFGVR+ +RKS SM NL+ + PL+ + + D A G SAD
Sbjct: 23 VKLFGVRLTDGLIRKSASMGNLTHFASGSGGGSTPLNGVVHDSPGDTPDHPAVGGGSADG 82
Query: 290 AAPQN--SGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVAS 463
A ++ +G RERK+GVPWTEEEH++FL+GL K+GKGDWRGI++NYV +RTPTQVAS
Sbjct: 83 YASEDFVAGSSSSRERKKGVPWTEEEHRMFLLGLGKLGKGDWRGIARNYVISRTPTQVAS 142
Query: 464 HAQKYFLRRS 493
HAQKYF+R+S
Sbjct: 143 HAQKYFIRQS 152
>gi|9558504|dbj|BAB03423.1| (AP002816) ESTs AU091667(E11049),C73570(E11049)
correspond to a region of the predicted gene.~Similar to
Arabidopsis thaliana chromosome 3, BAC T02O04; Myb-related
transcription activator (AC001645) [Oryza sativa]
>gi|9711831|dbj|BAB07930.1| (AP002836) putative Myb-related
transcription activator (MybSt1) [Oryza sativa]
Length = 347
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 347
0 150 300
Plus Strand HSPs:
Score = 293 (103.1 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 64/139 (46%), Positives = 85/139 (61%), Frame = +2
Query: 110 SRASSAASGEIMLFGVRVVVD---SMRKSVSMNNLSQY---------EHPLDATTTNNNK 253
+R G + LFGVR+ +M+KS SM+ ++ P
Sbjct: 20 ARGGGGGGGGVRLFGVRLTSPPEVAMKKSASMSCIASSLGSGGGSGGSSPAGTGRGGGGG 79
Query: 254 DAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYV 433
AAGYAS DD + + ERK+G PWTEEEH++FL+GLQK+GKGDWRGIS+N+V
Sbjct: 80 GEGAAGYAS-DDPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFV 138
Query: 434 KTRTPTQVASHAQKYFLRRS 493
+RTPTQVASHAQKYF+R++
Sbjct: 139 VSRTPTQVASHAQKYFIRQT 158
>gi|9988432|dbj|BAB12698.1| (AP002746) hypothetical protein [Oryza sativa]
Length = 243
Frame 2 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | | 243
0 50 100 150 200
Plus Strand HSPs:
Score = 265 (93.3 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 47/59 (79%), Positives = 56/59 (94%), Frame = +2
Query: 317 RERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRS 493
R +ERK+GVPWTEEEH+ FLVGL+K+GKGDWRGIS+++V TRTPTQVASHAQKYFLR+S
Sbjct: 116 RAQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQS 174
Score = 251 (88.4 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 63/139 (45%), Positives = 90/139 (64%), Frame = +2
Query: 131 SGEIMLFGVRVVVDS--MRKSVSMNNLSQ--------YEHPLDATTTNNNKD-AVAAGYA 277
+G + LFGV++ V ++K SM LS Y + A +N++ + ++
Sbjct: 36 AGGVRLFGVQLHVGGAPLKKCFSMECLSSPSPSPSPAYYAAVAAAASNSSPTVSSSSSLV 95
Query: 278 SADDAAPQNSGRH-------RERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVK 436
S ++A + + + R +ERK+GVPWTEEEH+ FLVGL+K+GKGDWRGIS+++V
Sbjct: 96 SVEEAGEKMANGYLSDGLMARAQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVT 155
Query: 437 TRTPTQVASHAQKYFLRRSKKYFLRRS 517
TRTPTQVASHAQKYFLR+S
Sbjct: 156 TRTPTQVASHAQKYFLRQS-------- 174
Score = 37 (13.0 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 7/19 (36%), Positives = 11/19 (57%), Frame = +2
Query: 77 TQPAPPPDPTMSRASSAAS 133
+ P+P P P A +AA+
Sbjct: 63 SSPSPSPSPAYYAAVAAAA 81
>gi|10176788|dbj|BAB09902.1| (AB013392) contains similarity to Myb-related
transcription activator~gene_id:MIK19.31 [Arabidopsis thaliana]
Length = 233
Frame 2 hits (HSPs): ________ ___________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 254 (89.4 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 49/90 (54%), Positives = 66/90 (73%), Frame = +2
Query: 224 LDATTTNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKG 403
+D ++ + AGY S D A H+ +RK+GVPWT EEH+ FL+GL+K+GKG
Sbjct: 59 MDCLPACSSSSSSFAGYLS-DGLA------HKTPDRKKGVPWTAEEHRTFLIGLEKLGKG 111
Query: 404 DWRGISKNYVKTRTPTQVASHAQKYFLRRS 493
DWRGIS+N+V T++PTQVASHAQKYFLR++
Sbjct: 112 DWRGISRNFVVTKSPTQVASHAQKYFLRQT 141
Score = 45 (15.8 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 11/35 (31%), Positives = 19/35 (54%), Frame = +2
Query: 17 SSHRVTHSPRLVRTPIPPSHTQPAPPPDPTMSRAS 121
SS++ T RL + + + P PPP P++ A+
Sbjct: 19 SSYQ-TRVVRLFGVHLDTTSSSPPPPPPPSILAAA 52
Score = 37 (13.0 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 12/37 (32%), Positives = 19/37 (51%), Frame = +2
Query: 17 SSHRVTHSPRLVRTPIPPSHTQPAPPPDPTMSRASSA 127
SS++ T RL + + + P PPP P++ A A
Sbjct: 19 SSYQ-TRVVRLFGVHLDTTSSSPPPPPPPSILAA--A 52
>gi|12406993|emb|CAC24844.1| (AJ303354) MCB1 protein [Hordeum vulgare]
Length = 270
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | | 270
0 50 100 150 200 250
Plus Strand HSPs:
Score = 283 (99.6 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 61/107 (57%), Positives = 77/107 (71%), Frame = +2
Query: 176 MRKSVSMNNLSQYEHPLDATTTNNNKDAVAAGYASADD---AAPQNSGRHRE-RERKRGV 343
++KS SM NL+ L + + D GYAS D + PQ R R+ +ERKRG+
Sbjct: 36 LKKSTSMPNLASIGPILPRGEASASHDK---GYASDDGELASTPQLKRRRRKAQERKRGI 92
Query: 344 PWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRS 493
PWTEEEH+ FL GL+++GKGDWRGISKN+V TRT TQVASHAQKYFLR++
Sbjct: 93 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKYFLRQT 142
>gi|12406995|emb|CAC24845.1| (AJ303355) MCB2 protein [Hordeum vulgare]
Length = 261
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 283 (99.6 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 68/139 (48%), Positives = 91/139 (65%), Frame = +2
Query: 119 SSAASGEIMLFGVRVVVD---------SMRKSVSMNNLSQYEHPLDATT-TNNNKDAVAA 268
S++ SG + LFGV+V V SMRKS SM+ L P + ++++ +V
Sbjct: 10 STSGSG-LRLFGVQVHVAAGRSARAGASMRKSYSMDCLQLAAAPSSIVSPSSSSSSSVLL 68
Query: 269 GYASADDAAPQ---NSGRHRE--RERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYV 433
+ A + G H +ERK+GVPW+EEEH+LFLVGL+K+GKGDWRGIS++YV
Sbjct: 69 SIDEGLERASNGYLSDGPHGRLVQERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYV 128
Query: 434 KTRTPTQVASHAQKYFLRRS 493
TRTPTQVASHAQK+FLR+S
Sbjct: 129 TTRTPTQVASHAQKFFLRQS 148
>gi|9758477|dbj|BAB09006.1| (AB012239) contains similarity to Myb-related
transcription activator~gene_id:K11J9.15 [Arabidopsis thaliana]
Length = 317
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | | 317
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 274 (96.5 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 58/123 (47%), Positives = 78/123 (63%), Frame = +2
Query: 140 IMLFGVRVVVDSMRK-SVSMNNLSQYEHPLDATTTNNNKDAVAAGYASADDAAPQNSGR- 313
+ LFGV + D +R V+ S LDA N+ + A+ DD + G+
Sbjct: 34 VKLFGVNISSDPIRPPEVTALRKSLSLGNLDALLANDESNGSGDPIAAVDDTGYHSDGQI 93
Query: 314 HRER-----ERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKY 478
H ++ E+K+G PWTEEEH+ FL+GL K+GKGDWRGI+K++V TRTPTQVASHAQKY
Sbjct: 94 HSKKGKTAHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKY 153
Query: 479 FLR 487
F+R
Sbjct: 154 FIR 156
>gi|11358465|pir||T48472 I-box binding factor-like protein - Arabidopsis
thaliana >gi|7413538|emb|CAB86018.1| (AL162972) I-box binding
factor-like protein [Arabidopsis thaliana]
>gi|9758451|dbj|BAB08980.1| (AB008271) I-box binding factor-like
protein [Arabidopsis thaliana]
Length = 215
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 272 (95.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 57/98 (58%), Positives = 69/98 (70%), Frame = +2
Query: 224 LDATTTNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKG 403
+D ++ A AAG+ SA + +H E ERKRG PWTE EHKLFL+GL++ GKG
Sbjct: 62 VDVPDYMDDSAAAAAGWDSAGQIS--FGSKHGESERKRGTPWTENEHKLFLIGLKRYGKG 119
Query: 404 DWRGISKNYVKTRTPTQVASHAQKYFLRR-SKKYFLRRS 517
DWR IS+N V TRTPTQVASHAQKYFLR+ S K +RS
Sbjct: 120 DWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRS 158
>gi|10798825|dbj|BAB16456.1| (AP002483) putative myb-related transcription
activator [Oryza sativa]
Length = 330
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 330
0 150 300
Plus Strand HSPs:
Score = 270 (95.0 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 48/60 (80%), Positives = 56/60 (93%), Frame = +2
Query: 308 GRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLR 487
GR E+ERK+GVPWTEEEHKLFL+GL+K GKGDWR IS+N+V+TRTPTQVASHAQKYF+R
Sbjct: 128 GRTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYFIR 187
>gi|9759223|dbj|BAB09635.1| (AB016885) contains similarity to Myb-related
transcription factor~gene_id:K19M22.10 [Arabidopsis thaliana]
Length = 288
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | 288
0 50 100 150 200 250
Plus Strand HSPs:
Score = 266 (93.6 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 48/62 (77%), Positives = 56/62 (90%), Frame = +2
Query: 305 SGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFL 484
+GR E ERK+GVPWTEEEHKLFL+GL+K GKGDWR IS+N+V TRTPTQVASHAQKYF+
Sbjct: 129 AGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI 188
Query: 485 RR 490
R+
Sbjct: 189 RQ 190
>gi|12005328|gb|AAG44394.1| (AF239956) unknown [Hevea brasiliensis]
Length = 310
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | | 310
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 266 (93.6 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 50/84 (59%), Positives = 61/84 (72%), Frame = +2
Query: 242 NNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGIS 421
NNN+ + + R E+ERK+GVPWTEEEH+ FL+GLQK GKGDWR IS
Sbjct: 103 NNNQGYDGFRHYYTPGGKRTTAARSSEQERKKGVPWTEEEHRQFLMGLQKYGKGDWRNIS 162
Query: 422 KNYVKTRTPTQVASHAQKYFLRRS 493
+N+V TRTPTQVASHAQKYF+R+S
Sbjct: 163 RNFVTTRTPTQVASHAQKYFIRQS 186
>gi|7446171|pir||T01241 myb-related transcription activator F16M14.2 -
Arabidopsis thaliana >gi|3335378|gb|AAC27179.1| (AC003028) putative
MYB family transcription factor [Arabidopsis thaliana]
Length = 291
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | | 291
0 50 100 150 200 250
Plus Strand HSPs:
Score = 260 (91.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 49/84 (58%), Positives = 62/84 (73%), Frame = +2
Query: 239 TNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGI 418
+ NN + Y SA ++ R E ERK+GVPWTEEEH+ FL+GL+K GKGDWR I
Sbjct: 100 SGNNGFNMNGYYFSAAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNI 159
Query: 419 SKNYVKTRTPTQVASHAQKYFLRR 490
++N+V TRTPTQVASHAQKYF+R+
Sbjct: 160 ARNFVTTRTPTQVASHAQKYFIRQ 183
>gi|7770343|gb|AAF69713.1|AC016041_18 (AC016041) F27J15.20 [Arabidopsis
thaliana]
Length = 314
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | | 314
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 255 (89.8 bits), Expect = 7.1e-21, P = 7.1e-21
Identities = 49/84 (58%), Positives = 65/84 (77%), Frame = +2
Query: 266 AGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRT 445
+G +S++ ++ G E+ER++G+PWTEEEH+LFL+GL K GKGDWR IS+N+V +RT
Sbjct: 111 SGISSSNGG--RSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 168
Query: 446 PTQVASHAQKYFLR-RSKKYFLRRS 517
PTQVASHAQKYF+R S RRS
Sbjct: 169 PTQVASHAQKYFIRLNSMNRDRRRS 193
>gi|11346457|pir||T45960 hypothetical protein F7J8.180 - Arabidopsis thaliana
>gi|6759443|emb|CAB69848.1| (AL137189) putative protein
[Arabidopsis thaliana]
Length = 267
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | 267
0 50 100 150 200 250
Plus Strand HSPs:
Score = 244 (85.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 43/57 (75%), Positives = 52/57 (91%), Frame = +2
Query: 320 ERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRR 490
E+ERK+GVPWTE+EH FL+GL+K GKGDWR I+K++V TRTPTQVASHAQKYFLR+
Sbjct: 139 EKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQ 195
>gi|6688529|emb|CAB65169.1| (AJ243339) I-box binding factor [Lycopersicon
esculentum]
Length = 191
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 191
0 50 100 150
Plus Strand HSPs:
Score = 241 (84.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 42/60 (70%), Positives = 51/60 (85%), Frame = +2
Query: 311 RHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRR 490
+ E ERK+G PWTE+EH+LFL+GL K GKGDWR IS+N V +RTPTQVASHAQKYF+R+
Sbjct: 89 KSNEIERKKGTPWTEDEHRLFLIGLDKYGKGDWRSISRNVVVSRTPTQVASHAQKYFIRQ 148
>gi|9759346|dbj|BAB10001.1| (AB006697) contains similarity to I-box binding
factor~gene_id:MAH20.8 [Arabidopsis thaliana]
Length = 298
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 298
0 50 100 150 200 250
Plus Strand HSPs:
Score = 240 (84.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 45/73 (61%), Positives = 59/73 (80%), Frame = +2
Query: 305 SGRHR-ERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYF 481
+G+ + ++ER++G+ WTE+EH+LFL+GL K GKGDWR IS+N+V TRTPTQVASHAQKYF
Sbjct: 105 AGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 164
Query: 482 LR-RSKKYFLRRS 517
+R S RRS
Sbjct: 165 IRLNSMNKDRRRS 177
>gi|9759104|dbj|BAB09673.1| (AB005237) contains similarity to I-box binding
factor~gene_id:MJJ3.20 [Arabidopsis thaliana]
Length = 277
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | 277
0 50 100 150 200 250
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 40/63 (63%), Positives = 53/63 (84%), Frame = +2
Query: 302 NSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYF 481
N R +++R++GVPWTEEEH+ FL+GL K GKGDWR IS+N+V ++TPTQVASHAQKY+
Sbjct: 118 NGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYY 177
Query: 482 LRR 490
R+
Sbjct: 178 QRQ 180
>gi|12321867|gb|AAG50963.1|AC073395_5 (AC073395) MYB-family transcription
factor, putative; alternative splicing isoform 1 of 2;71559-70643
[Arabidopsis thaliana] >gi|12321868|gb|AAG50964.1|AC073395_6
(AC073395) MYB-family transcription factor, putative; alternative
splicing isoform 2 of 2;71559-70643 [Arabidopsis thaliana]
Length = 263
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 42/63 (66%), Positives = 54/63 (85%), Frame = +2
Query: 305 SG-RHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYF 481
SG R +++RK+GVPWTEEEH+ FL+GL K GKGDWR IS+N+V ++TPTQVASHAQKY+
Sbjct: 114 SGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY 173
Query: 482 LRR 490
R+
Sbjct: 174 QRQ 176
>gi|7267587|emb|CAB78068.1| (AL161514) putative protein [Arabidopsis thaliana]
Length = 200
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | 200
0 50 100 150
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 39/76 (51%), Positives = 51/76 (67%), Frame = +2
Query: 272 YASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPT 451
Y D +G + +K G+PW+EEE +LFL GL K GKGDW+ IS+ VK+RT T
Sbjct: 68 YPEDDYVKLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTST 127
Query: 452 QVASHAQKYFLRRSKK 499
QVASHAQKYF R+ ++
Sbjct: 128 QVASHAQKYFARQKQE 143
>gi|8567789|gb|AAF76361.1| (AC013428) I-box binding factor, putative
[Arabidopsis thaliana] >gi|12322787|gb|AAG51384.1|AC011560_16
(AC011560) hypothetical protein; 39127-40274 [Arabidopsis thaliana]
Length = 287
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | 287
0 50 100 150 200 250
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 36/57 (63%), Positives = 46/57 (80%), Frame = +2
Query: 329 RKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSKK 499
+K+G+PW+ EEH+LFL GL K GKGDW+ IS+ V +R+P QVASHAQKYFLR+ K
Sbjct: 91 KKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKNK 147
>gi|8809695|dbj|BAA97236.1| (AB025633) contains similarity to I-box binding
factor~gene_id:MQM1.9 [Arabidopsis thaliana]
Length = 337
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 337
0 150 300
Plus Strand HSPs:
Score = 196 (69.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 37/62 (59%), Positives = 49/62 (79%), Frame = +2
Query: 299 QNSGRHR-ERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQK 475
++ G+ + +++R+RGVPW EH+ FL GL+K GKGDWR IS++ V TRT TQVASHAQK
Sbjct: 105 KHKGKSKLKQKRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQK 164
Query: 476 YF 481
YF
Sbjct: 165 YF 166
>gi|8567791|gb|AAF76363.1| (AC013428) I-box binding factor, putative
[Arabidopsis thaliana] >gi|12322783|gb|AAG51380.1|AC011560_12
(AC011560) hypothetical protein; 36046-36933 [Arabidopsis thaliana]
Length = 206
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | 206
0 50 100 150 200
Plus Strand HSPs:
Score = 169 (59.5 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 41/111 (36%), Positives = 63/111 (56%), Frame = +2
Query: 194 MNNLSQY-EHPLDATTTNNNKDAVAAGYASADDAAP-QNSGRHRERERKRGVPWTEEEHK 367
+ N++Q+ + P++ + +A + P S + + R++ PWTEEEH+
Sbjct: 60 LENVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHR 119
Query: 368 LFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRS-KKYFLRRS 517
LFL GL+K G+G S N+VKT+TP QV+SHAQ Y ++S K RRS
Sbjct: 120 LFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYKRQKSDNKKEKRRS 170
>gi|8096307|dbj|BAA95810.1| (AP002069) Similar to Arabidopsis thaliana
chromosome II BAC F16M14 genomic sequence, putative MYB family
transcription factor. (AC003028) [Oryza sativa]
Length = 362
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 362
0 150 300
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 34/88 (38%), Positives = 49/88 (55%), Frame = +2
Query: 242 NNNKDAVAAGY----ASADDAAPQNSGRHRE----RERKRGVPWTEEEHKLFLVGLQKVG 397
NNN D V AG A ++ A +G E V WT+ EH+LFL G++ G
Sbjct: 135 NNNDDGVDAGMVFGGAPMEEGAVAVNGGDGEVVNPDNADDDVLWTDYEHRLFLTGMRVYG 194
Query: 398 KGDWRGISKNYVKTRTPTQVASHAQKYF 481
+GDWR I++ +V ++TP QV+ +A YF
Sbjct: 195 RGDWRNIARYFVGSKTPEQVSMYADNYF 222
>gi|6682239|gb|AAF23291.1|AC016661_16 (AC016661) putative MYB-related protein
[Arabidopsis thaliana]
Length = 125
Frame 2 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | 125
0 50 100
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/107 (38%), Positives = 54/107 (50%), Frame = +2
Query: 176 MRKSVSMNNLSQYEHPLDATTTNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTE 355
M S S N + P T+T DAVA G +S P + RE WTE
Sbjct: 1 MSSSPSRNPTNAEAPPPPPTST----DAVAEG-SSKKVRKPYTITKSRES-------WTE 48
Query: 356 EEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSK 496
EEH FL LQ + DW+ I +++V ++T Q+ SHAQKYFL+ K
Sbjct: 49 EEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQK 93
>gi|8567790|gb|AAF76362.1| (AC013428) I-box binding factor, putative
[Arabidopsis thaliana]
Length = 162
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | 162
0 50 100 150
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 35/78 (44%), Positives = 43/78 (55%), Frame = +2
Query: 266 AGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRT 445
A Y S +A G + R +PWTEEEH+ + GKG W IS+ +V T
Sbjct: 72 AYYVSLTEATESKHGETNQIPRI--IPWTEEEHRFY-------GKGAWSMISREFV---T 119
Query: 446 PTQVASHAQKYFLRR---SKK 499
TQVASHAQKY R+ SKK
Sbjct: 120 STQVASHAQKYDKRQKLDSKK 140
>gi|100864|pir||S08315 cell wall protein - maize (fragment)
>gi|22269|emb|CAA31860.1| (X13506) cell wall protein (108 AA) [Zea
mays] >gi|168459|gb|AAA33457.1| (M36914) cell wall protein (put.);
putative [Zea mays]
Length = 108
Frame 3 hits (HSPs): _________________________________________
Frame 2 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | | | | 108
0 20 40 60 80 100
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 17/29 (58%), Positives = 18/29 (62%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPP---PTTPLLRTP 308
P PPT T TP PPA PP PT P+ TP
Sbjct: 73 PTPPTYTPTPKPPAKPPTYTPTPPVSHTP 101
Score = 81 (28.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 17/29 (58%), Positives = 18/29 (62%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPT---TPLLRTP 308
P PPT T +P PPAT PPT TP TP
Sbjct: 52 PTPPTYTPSPKPPATKPPTPKPTPPTYTP 80
Score = 72 (25.3 bits), Expect = 0.0040, Sum P(2) = 0.0040
Identities = 16/34 (47%), Positives = 19/34 (55%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGATASASE 332
P PPT T +P PP TP PT P TP A++
Sbjct: 36 PTPPTYTPSPKPP-TPKPTPPTY-TPSPKPPATK 67
Score = 70 (24.6 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 15/26 (57%), Positives = 16/26 (61%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTP 308
P PPT T +P PP TP PT P TP
Sbjct: 20 PTPPTYTPSPKPP-TPKPTPPTY-TP 43
Score = 69 (24.3 bits), Expect = 0.017, Sum P(2) = 0.017
Identities = 16/34 (47%), Positives = 18/34 (52%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPT--------TPLLRTP 308
P PPT T +P PPAT PPT TP + P
Sbjct: 52 PTPPTYTPSPKPPATKPPTPKPTPPTYTPTPKPP 85
Score = 67 (23.6 bits), Expect = 0.068, Sum P(2) = 0.066
Identities = 14/29 (48%), Positives = 16/29 (55%), Frame = +3
Query: 231 PPPPTTTKTPSPPA---TPPPTTPLLRTP 308
P PPT T +P PP TPP TP + P
Sbjct: 20 PTPPTYTPSPKPPTPKPTPPTYTPSPKPP 48
Score = 53 (18.7 bits), Expect = 6.8, Sum P(2) = 1.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Frame = +3
Query: 228 TPPPPTT--TKTPSPPA--TPPPTTP 293
TP PP T TP+PP TP P P
Sbjct: 81 TPKPPAKPPTYTPTPPVSHTPCPPPP 106
Score = 51 (18.0 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 10/22 (45%), Positives = 12/22 (54%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPT 106
P +P PP+H P P P PT
Sbjct: 4 PTYTPSPKPPTHPTPKPTP-PT 24
Score = 49 (17.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/17 (52%), Positives = 11/17 (64%), Frame = +2
Query: 59 PIPPSHT-QPAPPPDPT 106
P PP++T P PP PT
Sbjct: 1 PTPPTYTPSPKPPTHPT 17
Score = 49 (17.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 13/28 (46%), Positives = 16/28 (57%), Frame = +2
Query: 32 THSPRL-VRTPIPPSHT-QPAPP-PDPT 106
T SP+ P PP++T P PP P PT
Sbjct: 26 TPSPKPPTPKPTPPTYTPSPKPPTPKPT 53
Score = 48 (16.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/18 (55%), Positives = 12/18 (66%), Frame = +2
Query: 59 PIPPSHT-QPAPP-PDPT 106
P PP++T P PP P PT
Sbjct: 20 PTPPTYTPSPKPPTPKPT 37
Score = 45 (15.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 8/21 (38%), Positives = 10/21 (47%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDP 103
P +P PP+ P P P P
Sbjct: 55 PTYTPSPKPPATKPPTPKPTP 75
Score = 44 (15.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 11/25 (44%), Positives = 15/25 (60%), Frame = +2
Query: 32 THSPRL-VRTPIPPSHTQPAPPPDPT 106
T SP+ P PP++T P+P P T
Sbjct: 42 TPSPKPPTPKPTPPTYT-PSPKPPAT 66
Score = 42 (14.8 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 10/22 (45%), Positives = 13/22 (59%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPT 106
P +P PP+ T+P P P PT
Sbjct: 55 PTYTPSPKPPA-TKP-PTPKPT 74
>gi|168457|gb|AAA33456.1| (M36913) cell wall protein (put.); putative [Zea
mays]
Length = 109
Frame 3 hits (HSPs): _________________________________________
Frame 2 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | | 109
0 20 40 60 80 100
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 16/22 (72%), Positives = 16/22 (72%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPT-TP 293
P PPT T TP PPAT PPT TP
Sbjct: 73 PTPPTYTPTPKPPATKPPTYTP 94
Score = 81 (28.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 17/29 (58%), Positives = 18/29 (62%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPT---TPLLRTP 308
P PPT T +P PPAT PPT TP TP
Sbjct: 52 PTPPTYTPSPKPPATKPPTPKPTPPTYTP 80
Score = 72 (25.3 bits), Expect = 0.0049, Sum P(2) = 0.0048
Identities = 16/34 (47%), Positives = 19/34 (55%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGATASASE 332
P PPT T +P PP TP PT P TP A++
Sbjct: 36 PTPPTYTPSPKPP-TPKPTPPTY-TPSPKPPATK 67
Score = 70 (24.6 bits), Expect = 0.021, Sum P(2) = 0.021
Identities = 15/26 (57%), Positives = 16/26 (61%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTP 308
P PPT T +P PP TP PT P TP
Sbjct: 20 PTPPTYTPSPKPP-TPKPTPPTY-TP 43
Score = 69 (24.3 bits), Expect = 0.020, Sum P(2) = 0.019
Identities = 16/34 (47%), Positives = 18/34 (52%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPT--------TPLLRTP 308
P PPT T +P PPAT PPT TP + P
Sbjct: 52 PTPPTYTPSPKPPATKPPTPKPTPPTYTPTPKPP 85
Score = 67 (23.6 bits), Expect = 0.076, Sum P(2) = 0.073
Identities = 14/29 (48%), Positives = 16/29 (55%), Frame = +3
Query: 231 PPPPTTTKTPSPPA---TPPPTTPLLRTP 308
P PPT T +P PP TPP TP + P
Sbjct: 20 PTPPTYTPSPKPPTPKPTPPTYTPSPKPP 48
Score = 60 (21.1 bits), Expect = 0.64, Sum P(2) = 0.47
Identities = 15/29 (51%), Positives = 15/29 (51%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
P PPT T TP PPAT PPT T
Sbjct: 73 PTPPTYTPTPKPPATKPPTY--------T 93
Score = 59 (20.8 bits), Expect = 0.97, Sum P(2) = 0.62
Identities = 14/27 (51%), Positives = 15/27 (55%), Frame = +3
Query: 228 TPPPPTT---TKTPSPPA--TPPPTTP 293
TP PP T T TP+PP TP P P
Sbjct: 81 TPKPPATKPPTYTPTPPVSHTPSPPPP 107
Score = 51 (18.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/22 (45%), Positives = 12/22 (54%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPT 106
P +P PP+H P P P PT
Sbjct: 4 PTYTPSPKPPTHPTPKPTP-PT 24
Score = 49 (17.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/17 (52%), Positives = 11/17 (64%), Frame = +2
Query: 59 PIPPSHT-QPAPPPDPT 106
P PP++T P PP PT
Sbjct: 1 PTPPTYTPSPKPPTHPT 17
Score = 49 (17.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 13/28 (46%), Positives = 16/28 (57%), Frame = +2
Query: 32 THSPRL-VRTPIPPSHT-QPAPP-PDPT 106
T SP+ P PP++T P PP P PT
Sbjct: 26 TPSPKPPTPKPTPPTYTPSPKPPTPKPT 53
Score = 48 (16.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 10/18 (55%), Positives = 12/18 (66%), Frame = +2
Query: 59 PIPPSHT-QPAPP-PDPT 106
P PP++T P PP P PT
Sbjct: 20 PTPPTYTPSPKPPTPKPT 37
Score = 45 (15.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 8/21 (38%), Positives = 10/21 (47%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDP 103
P +P PP+ P P P P
Sbjct: 55 PTYTPSPKPPATKPPTPKPTP 75
Score = 44 (15.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/25 (44%), Positives = 15/25 (60%), Frame = +2
Query: 32 THSPRL-VRTPIPPSHTQPAPPPDPT 106
T SP+ P PP++T P+P P T
Sbjct: 42 TPSPKPPTPKPTPPTYT-PSPKPPAT 66
Score = 42 (14.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/22 (45%), Positives = 13/22 (59%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPT 106
P +P PP+ T+P P P PT
Sbjct: 55 PTYTPSPKPPA-TKP-PTPKPT 74
>gi|11067829 ref|NP_067812.1| PxORF73 peptide [Plutella xylostella
granulovirus] >gi|11067950 ref|NP_067932.1| PxORF73 peptide
[Plutella xylostella granulovirus] >gi|11068076 ref|NP_068292.1|
PxORF73 peptide [Plutella xylostella granulovirus]
>gi|11036868|gb|AAG27371.1|AF270937_73 (AF270937) PxORF73 peptide
[Plutella xylostella granulovirus]
Length = 158
Frame 3 hits (HSPs): _______________________________________
Frame 2 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 158
0 50 100 150
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/29 (58%), Positives = 18/29 (62%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
PPPP T P+PP TPPPT P TP T
Sbjct: 108 PPPPPPTPPPTPPPTPPPTPP--PTPPPT 134
Score = 86 (30.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/30 (56%), Positives = 18/30 (60%), Frame = +3
Query: 231 PPPPTTTKTP--SPPATPPPTTPLLRTPGA 314
PPPPT TP +PP TPPPT P P A
Sbjct: 110 PPPPTPPPTPPPTPPPTPPPTPPPTPNPDA 139
Score = 83 (29.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 15/23 (65%), Positives = 16/23 (69%), Frame = +3
Query: 228 TPPP-PTTTKTPSPPATPPPTTP 293
TPPP P T P+PP TPPPT P
Sbjct: 57 TPPPTPPPTPPPTPPPTPPPTPP 79
Score = 82 (28.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 16/29 (55%), Positives = 17/29 (58%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
PPPP P+PP TPPPT P TP T
Sbjct: 104 PPPPPPPPPPTPPPTPPPTPP--PTPPPT 130
Score = 81 (28.5 bits), Expect = 1.7, P = 0.82
Identities = 18/29 (62%), Positives = 19/29 (65%), Frame = +3
Query: 231 PPPPTTTKTP-SPPATPPPTTPLLRTPGAT 317
PPPPT TP + PATPPPT P TP T
Sbjct: 34 PPPPTPPPTPPTSPATPPPTFP--PTPPPT 61
Score = 80 (28.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/29 (55%), Positives = 16/29 (55%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
PPPP P PP TPPPT P TP T
Sbjct: 100 PPPPPPPPPPPPPPTPPPTPP--PTPPPT 126
Score = 79 (27.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/21 (61%), Positives = 14/21 (66%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTP 293
PP P T P+PP TPPPT P
Sbjct: 55 PPTPPPTPPPTPPPTPPPTPP 75
Score = 79 (27.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/31 (51%), Positives = 19/31 (61%), Frame = +3
Query: 228 TPPP-PTTTKTPSPPATPPPTTP---LLRTP 308
TPPP P T P+PP TPPPT P ++ P
Sbjct: 57 TPPPTPPPTPPPTPPPTPPPTPPPPPIIPAP 87
Score = 77 (27.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 14/21 (66%), Positives = 15/21 (71%), Frame = +3
Query: 228 TPPP-PTTTKTPSPPATPPPT 287
TPPP P T P+PP TPPPT
Sbjct: 114 TPPPTPPPTPPPTPPPTPPPT 134
Score = 77 (27.1 bits), Expect = 0.41, Sum P(2) = 0.34
Identities = 19/32 (59%), Positives = 20/32 (62%), Frame = +3
Query: 228 TPPP--PTTTKTPSP--PATPPPTTPLLRTPGAT 317
TPPP PT+ TP P P TPPPT P TP T
Sbjct: 38 TPPPTPPTSPATPPPTFPPTPPPTPP--PTPPPT 69
Score = 76 (26.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 17/28 (60%), Positives = 18/28 (64%), Frame = +3
Query: 234 PPPT--TTKTPSPPATPPPTTPLLRTPGAT 317
PPPT T P+PP TPPPT P TP T
Sbjct: 50 PPPTFPPTPPPTPPPTPPPTPP--PTPPPT 77
Score = 74 (26.0 bits), Expect = 0.0012, Sum P(2) = 0.0012
Identities = 15/29 (51%), Positives = 15/29 (51%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
PPPP P PP PPPT P TP T
Sbjct: 96 PPPPPPPPPPPPPPPPPPTPP--PTPPPT 122
Score = 73 (25.7 bits), Expect = 0.0018, Sum P(2) = 0.0018
Identities = 17/30 (56%), Positives = 18/30 (60%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
TPPP T P+PP TPPPT P TP T
Sbjct: 49 TPPP---TFPPTPPPTPPPTPP--PTPPPT 73
Score = 72 (25.3 bits), Expect = 0.0024, Sum P(2) = 0.0024
Identities = 12/22 (54%), Positives = 12/22 (54%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTP 293
TPPPP PSPP PP P
Sbjct: 77 TPPPPPIIPAPSPPTAPPQPPP 98
Score = 71 (25.0 bits), Expect = 0.0032, Sum P(2) = 0.0031
Identities = 15/26 (57%), Positives = 16/26 (61%), Frame = +3
Query: 234 PPPTTTKTPSPPATPPPTT-PLLRTP 308
PPPT TP+P A PP T P LR P
Sbjct: 127 PPPTPPPTPNPDAVIPPITRPPLRPP 152
Score = 70 (24.6 bits), Expect = 0.0045, Sum P(2) = 0.0045
Identities = 17/36 (47%), Positives = 20/36 (55%), Frame = +3
Query: 228 TPPP-PTTTKTPSPPATPPPTTP---LLRTPG---A 314
TPPP P T P+PP TPPPT P ++ P A
Sbjct: 57 TPPPTPPPTPPPTPPPTPPPTPPPPPIIPAPSPPTA 92
Score = 68 (23.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/27 (44%), Positives = 15/27 (55%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPTMSRAS 121
P+ + TP PP P PPP P S A+
Sbjct: 23 PKTIHTPSPPLPPPPTPPPTPPTSPAT 49
Score = 68 (23.9 bits), Expect = 0.0080, Sum P(2) = 0.0079
Identities = 12/25 (48%), Positives = 13/25 (52%), Frame = +3
Query: 219 IL*TPPPPTTTKTPSPPATPPPTTP 293
I+ P PPT P PP PPP P
Sbjct: 83 IIPAPSPPTAPPQPPPPPPPPPPPP 107
Score = 66 (23.2 bits), Expect = 0.013, Sum P(2) = 0.013
Identities = 11/20 (55%), Positives = 11/20 (55%), Frame = +3
Query: 234 PPPTTTKTPSPPATPPPTTP 293
PPP P PP PPP TP
Sbjct: 96 PPPPPPPPPPPPPPPPPPTP 115
Score = 65 (22.9 bits), Expect = 0.016, Sum P(2) = 0.016
Identities = 13/26 (50%), Positives = 13/26 (50%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPP----PTTP 293
TPPPP PSPP PP P P
Sbjct: 77 TPPPPPIIPAPSPPTAPPQPPPPPPP 102
Score = 62 (21.8 bits), Expect = 0.032, Sum P(2) = 0.032
Identities = 14/25 (56%), Positives = 14/25 (56%), Frame = +3
Query: 228 TPPP-PTTTKTPSP--PATPPPTTP 293
TPPP P T P P PA PPT P
Sbjct: 69 TPPPTPPPTPPPPPIIPAPSPPTAP 93
Score = 61 (21.5 bits), Expect = 0.041, Sum P(2) = 0.040
Identities = 12/26 (46%), Positives = 14/26 (53%), Frame = +3
Query: 219 IL*TPPPPTTT-KTPSPPATPPPTTP 293
I+ P PPT + P PP PPP P
Sbjct: 83 IIPAPSPPTAPPQPPPPPPPPPPPPP 108
Score = 54 (19.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/22 (45%), Positives = 13/22 (59%), Frame = +2
Query: 41 PRLVRTPIPPSHT-QPAPPPDP 103
P ++ P PP+ QP PPP P
Sbjct: 81 PPIIPAPSPPTAPPQPPPPPPP 102
Score = 51 (18.0 bits), Expect = 0.025, Sum P(2) = 0.025
Identities = 9/16 (56%), Positives = 9/16 (56%), Frame = +2
Query: 59 PIPPSHTQPAPPPDPT 106
P PP P PPP PT
Sbjct: 99 PPPPPPPPPPPPPPPT 114
Score = 50 (17.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 9/21 (42%), Positives = 10/21 (47%), Frame = +2
Query: 59 PIPPSHTQPAPPPDPTMSRAS 121
P PP P PPP P + S
Sbjct: 68 PTPPPTPPPTPPPPPIIPAPS 88
Score = 49 (17.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 56 PTPPPTPPPTPPPTP 70
Score = 49 (17.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 60 PTPPPTPPPTPPPTP 74
Score = 49 (17.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 64 PTPPPTPPPTPPPTP 78
Score = 49 (17.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 14/26 (53%), Positives = 14/26 (53%), Frame = +2
Query: 32 THSPRLVRTPIPPSH--TQPAPPPDPT 106
T SP L P PP T PA PP PT
Sbjct: 28 TPSPPLPPPPTPPPTPPTSPATPP-PT 53
Score = 49 (17.2 bits), Expect = 0.26, Sum P(2) = 0.23
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 113 PTPPPTPPPTPPPTP 127
Score = 47 (16.5 bits), Expect = 0.42, Sum P(2) = 0.34
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 105 PPPPPPPPPTPPPTP 119
Score = 47 (16.5 bits), Expect = 0.42, Sum P(2) = 0.34
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 109 PPPPPTPPPTPPPTP 123
Score = 46 (16.2 bits), Expect = 0.0020, Sum P(2) = 0.0020
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 94 PQPPPPPPPPPPPPP 108
Score = 46 (16.2 bits), Expect = 0.0020, Sum P(2) = 0.0020
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 96 PPPPPPPPPPPPPPP 110
Score = 46 (16.2 bits), Expect = 0.0041, Sum P(2) = 0.0041
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 97 PPPPPPPPPPPPPPP 111
Score = 46 (16.2 bits), Expect = 0.0041, Sum P(2) = 0.0041
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 98 PPPPPPPPPPPPPPP 112
Score = 46 (16.2 bits), Expect = 0.081, Sum P(2) = 0.078
Identities = 8/15 (53%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P PPP P
Sbjct: 101 PPPPPPPPPPPPPTP 115
Score = 43 (15.1 bits), Expect = 0.0041, Sum P(2) = 0.0040
Identities = 7/13 (53%), Positives = 7/13 (53%), Frame = +2
Query: 65 PPSHTQPAPPPDP 103
PP P PPP P
Sbjct: 93 PPQPPPPPPPPPP 105
Score = 43 (15.1 bits), Expect = 1.1, Sum P(2) = 0.65
Identities = 8/16 (50%), Positives = 8/16 (50%), Frame = +2
Query: 59 PIPPSHTQPAPPPDPT 106
P PP P P P PT
Sbjct: 103 PPPPPPPPPPPTPPPT 118
Score = 43 (15.1 bits), Expect = 1.1, Sum P(2) = 0.65
Identities = 8/16 (50%), Positives = 8/16 (50%), Frame = +2
Query: 59 PIPPSHTQPAPPPDPT 106
P PP P P P PT
Sbjct: 107 PPPPPPPTPPPTPPPT 122
Score = 42 (14.8 bits), Expect = 0.0051, Sum P(2) = 0.0051
Identities = 7/13 (53%), Positives = 7/13 (53%), Frame = +2
Query: 65 PPSHTQPAPPPDP 103
PP P PPP P
Sbjct: 50 PPPTFPPTPPPTP 62
Score = 42 (14.8 bits), Expect = 0.0051, Sum P(2) = 0.0051
Identities = 10/23 (43%), Positives = 10/23 (43%), Frame = +2
Query: 41 PRLVRTPIP--PSHTQPAPPPDP 103
P TP P P P PPP P
Sbjct: 44 PTSPATPPPTFPPTPPPTPPPTP 66
Score = 39 (13.7 bits), Expect = 0.010, Sum P(2) = 0.010
Identities = 6/6 (100%), Positives = 6/6 (100%), Frame = +3
Query: 117 PLPPPP 134
PLPPPP
Sbjct: 32 PLPPPP 37
Score = 37 (13.0 bits), Expect = 0.016, Sum P(2) = 0.016
Identities = 7/15 (46%), Positives = 8/15 (53%), Frame = +2
Query: 59 PIPPSHTQPAPPPDP 103
P PP P+PP P
Sbjct: 79 PPPPIIPAPSPPTAP 93
>gi|7485225|pir||T01715 hypothetical protein A_IG002N01.20 - Arabidopsis
thaliana >gi|2191140|gb|AAB61027.1| (AF007269) contains weak
similarity to MYB-related proteins [Arabidopsis thaliana]
Length = 213
Frame 2 hits (HSPs): ____________
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 213
0 50 100 150 200
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%), Frame = +2
Query: 347 WTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSK 496
WT++EH FL L + DW+ I +V ++T Q+ SHAQKYFL+ K
Sbjct: 62 WTDQEHDKFLEALHLFDR-DWKKIEA-FVGSKTVVQIRSHAQKYFLKVQK 109
Score = 44 (15.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/60 (23%), Positives = 32/60 (53%), Frame = +1
Query: 7 FSLFLSPSHALASTRTDSDPPESHSASTTARSDDVSRLFRRLRRDHAVRGQSRRRFDEEE 186
F +F S + +L S+ P + ST + S+D + ++R+ + ++ +SR + ++E
Sbjct: 11 FPVFDSSNMSLPSSDGFGSIPATGRTSTVSFSEDPTT---KIRKPYTIK-KSRENWTDQE 66
>gi|11357907|pir||T48305 hypothetical protein F9G14.150 - Arabidopsis thaliana
>gi|7413559|emb|CAB86038.1| (AL162973) putative protein
[Arabidopsis thaliana]
Length = 307
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 32/88 (36%), Positives = 46/88 (52%), Frame = +2
Query: 233 TTTNNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWR 412
T+T+ + +A A AP+ R K WTE EH FL LQ + DW+
Sbjct: 16 TSTDATETTIATTEAGE---APEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDR-DWK 71
Query: 413 GISKNYVKTRTPTQVASHAQKYFLRRSK 496
I +++V ++T Q+ SHAQKYFL+ K
Sbjct: 72 KI-EDFVGSKTVIQIRSHAQKYFLKVQK 98
>gi|2505876|emb|CAA73305.1| (Y12776) MYB-related protein [Arabidopsis thaliana]
Length = 162
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 162
0 50 100 150
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/50 (48%), Positives = 32/50 (64%), Frame = +2
Query: 347 WTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSK 496
WTE+EH FL L + DW+ I K +V ++T Q+ SHAQKYFL+ K
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQK 111
>gi|7291633|gb|AAF47056.1| (AE003461) CG12491 gene product [Drosophila
melanogaster]
Length = 157
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 157
0 50 100 150
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00013, P = 0.00013
Identities = 28/70 (40%), Positives = 39/70 (55%), Frame = +1
Query: 22 SPSHALASTRTDSDPPESHSASTTARSDDVSRLFRRLRRDHAVRGQSRRRFDEEERQHEQ 201
S S A+T S ++ S+ST++ S++V RL RRLRR +R Q RR+ ERQ E+
Sbjct: 84 STSSTTATTTAPSTSSDTSSSSTSSDSEEVDRLRRRLRRLRRLRRQERRQEIRRERQQER 143
Query: 202 PLTVRTSSRR 231
R RR
Sbjct: 144 RQQSRAGRRR 153
>gi|7940276|gb|AAF70835.1|AC003113_2 (AC003113) F24O1.6 [Arabidopsis thaliana]
Length = 70
Frame 3 hits (HSPs): __________________________________
Frame 2 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 70
0 20 40 60
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/29 (51%), Positives = 15/29 (51%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTPLLRTPGAT 317
PPPP P PP P P PL PGAT
Sbjct: 30 PPPPGPQPPPPPPPRPDPPPPL---PGAT 55
Score = 54 (19.0 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 9/20 (45%), Positives = 10/20 (50%), Frame = +3
Query: 234 PPPTTTKTPSPPATPPPTTP 293
PPP + P PP P P P
Sbjct: 21 PPPPEPRPPPPPPGPQPPPP 40
Score = 49 (17.2 bits), Expect = 0.54, Sum P(2) = 0.42
Identities = 9/21 (42%), Positives = 9/21 (42%), Frame = +3
Query: 231 PPPPTTTKTPSPPATPPPTTP 293
PPP P PP PP P
Sbjct: 17 PPPRPPPPEPRPPPPPPGPQP 37
Score = 46 (16.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/18 (50%), Positives = 9/18 (50%), Frame = +2
Query: 59 PIPPSHTQPAP---PPDP 103
P PP H P P PP P
Sbjct: 2 PYPPPHRHPPPFHHPPPP 19
Score = 43 (15.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 10/21 (47%), Frame = +2
Query: 53 RTPIPPSHTQPAPPPDPTMSR 115
R P PP H P P P P R
Sbjct: 8 RHP-PPFHHPPPPRPPPPEPR 27
Score = 38 (13.4 bits), Expect = 0.0013, Sum P(2) = 0.0013
Identities = 7/17 (41%), Positives = 8/17 (47%), Frame = +3
Query: 84 QHHRPIRRCLAPLPPPP 134
+H P P PPPP
Sbjct: 8 RHPPPFHHPPPPRPPPP 24
Score = 37 (13.0 bits), Expect = 0.0017, Sum P(2) = 0.0017
Identities = 8/16 (50%), Positives = 8/16 (50%), Frame = +3
Query: 87 HHRPIRRCLAPLPPPP 134
HH P R P P PP
Sbjct: 14 HHPPPPRPPPPEPRPP 29
>gi|8920588|gb|AAF81310.1|AC061957_6 (AC061957) Contains similarity to a
dehydrogenase from Arabidopsis thaliana gb|Y12776 and contains a
D-isomer specific 2-hydroxyacid dehydrogenases PF|00389 and
Myb-like DNA binding PF|00249 domains. ESTs gb|Z48385, gb|Z48386
come from this gene
Length = 1284
Frame 2 hits (HSPs): __ ___
__________________________________________________
Database sequence: | | | | 1284
0 500 1000
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/50 (48%), Positives = 32/50 (64%), Frame = +2
Query: 347 WTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSK 496
WTE+EH FL L + DW+ I K +V ++T Q+ SHAQKYFL+ K
Sbjct: 1061 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQK 1108
Score = 48 (16.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/51 (33%), Positives = 24/51 (47%), Frame = +2
Query: 11 LSSSHRVTHSPRLVRTPIPPSHTQPAPPPDPTMSRA-SSAASGEIMLFGVRV 163
+S H + H L T +T PP P S + S +A E+ LF VR+
Sbjct: 2 ISKDH-LHHLDPLGTTKSYHMNTSTVSPPSPASSISLSQSAWLEVRLFYVRI 52
>gi|2108256|emb|CAA73601.1| (Y13141) extensin [Bromheadia finlaysoniana]
Length = 71
Frame 3 hits (HSPs): _____________________________________________
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 71
0 20 40 60
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/27 (44%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP PP T + +P
Sbjct: 39 SPPPPYYYKSPPPPPPSPPPTYIYSSP 65
Score = 65 (22.9 bits), Expect = 0.0013, Sum P(2) = 0.0013
Identities = 11/27 (40%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP+ PP ++P
Sbjct: 23 SPPPPYYYKSPPPPSPSPPPPYYYKSP 49
Score = 65 (22.9 bits), Expect = 2.4, P = 0.91
Identities = 11/27 (40%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP+ PP ++P
Sbjct: 7 SPPPPYYYKSPPPPSPSPPPPYYYKSP 33
Score = 51 (18.0 bits), Expect = 0.050, Sum P(2) = 0.049
Identities = 13/23 (56%), Positives = 14/23 (60%), Frame = +3
Query: 228 TPPPPTTTKTPSPPAT-----PPPTTP 293
+PPPP PSPP T PPP P
Sbjct: 48 SPPPPP----PSPPPTYIYSSPPPPIP 70
Score = 45 (15.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 7/17 (41%), Positives = 11/17 (64%), Frame = +2
Query: 56 TPIPPSHTQPAPPPDPT 106
+P PP + + PPP P+
Sbjct: 7 SPPPPYYYKSPPPPSPS 23
Score = 45 (15.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 7/17 (41%), Positives = 11/17 (64%), Frame = +2
Query: 56 TPIPPSHTQPAPPPDPT 106
+P PP + + PPP P+
Sbjct: 23 SPPPPYYYKSPPPPSPS 39
Score = 45 (15.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 11/29 (37%), Positives = 15/29 (51%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAP-----PPDPTMS 112
P ++P PPS + P P PP P+ S
Sbjct: 11 PYYYKSPPPPSPSPPPPYYYKSPPPPSPS 39
Score = 44 (15.5 bits), Expect = 0.063, Sum P(2) = 0.061
Identities = 9/19 (47%), Positives = 12/19 (63%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP 97
P ++P PPS P+PPP
Sbjct: 27 PYYYKSPPPPS---PSPPP 42
>gi|8567792|gb|AAF76364.1| (AC013428) I-box binding factor, putative
[Arabidopsis thaliana]
Length = 183
Frame 2 hits (HSPs): ______________
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 183
0 50 100 150
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 20/51 (39%), Positives = 33/51 (64%), Frame = +2
Query: 347 WTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSKK 499
WT+E H+ FL+GL + GK DWR I+ + ++P QV +A+ ++ +S K
Sbjct: 84 WTKETHEWFLIGLDRFGK-DWRKIAV-LLDCKSPIQVEIYAENFYQWQSSK 132
Score = 39 (13.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 10/27 (37%), Positives = 12/27 (44%), Frame = +1
Query: 103 DDVSRLFRRLRRDHAVRGQSRRRFDEE 183
DDV ++ L D G SR F E
Sbjct: 41 DDVKEHYKELVNDLLEMGSSRVAFPNE 67
>gi|1362587|pir||S56117 spermatid-specific protein T2 precursor - longfin squid
Length = 118
Frame 1 hits (HSPs): _________________________________________
Frame -1 hits (HSPs): ___________________________________________
Frame -2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 118
0 50 100
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.00060, P = 0.00060
Identities = 26/72 (36%), Positives = 37/72 (51%), Frame = +1
Query: 124 RRLRRDHAVRGQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRRRRLRLRRRRRSSE 303
RR RR + R + RRR R+ + R+ RR + +++ RRRR R RRR RS
Sbjct: 26 RRSRRRRSRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRRRRSRSPY 85
Query: 304 LRAPPRARAKAR 339
R R R ++R
Sbjct: 86 RRRRRRRRRRSR 97
Score = 96 (33.8 bits), Expect = 0.00060, P = 0.00060
Identities = 28/73 (38%), Positives = 36/73 (49%), Frame = +1
Query: 121 FRRLRRDHAVRGQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRRRRLRLRRRRRSS 300
+RR RR R + RRR+ R + + R RR ++RRRRRR R RRRRR
Sbjct: 46 YRRRRRRRRRRSRRRRRY-RRRRSYSRRRRYRRR-RRSRSPYRRRRRRRRRRSRRRRRYR 103
Query: 301 ELRAPPRARAKAR 339
R+ R R R
Sbjct: 104 RRRSYSRRRRYRR 116
Score = 96 (33.8 bits), Expect = 0.00060, P = 0.00060
Identities = 29/78 (37%), Positives = 41/78 (52%), Frame = +1
Query: 112 SRLFRRLRRDHAVRGQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRR--RRLRLRR 285
SR RR RR + + RRR R+ + R+ SRR +++++R R RR R RR
Sbjct: 33 SRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRRRRSRSPYRRRRRRR 92
Query: 286 RRRSSELRAPPRARAKAR 339
RRRS R R R+ +R
Sbjct: 93 RRRSRRRRRYRRRRSYSR 110
Score = 94 (33.1 bits), Expect = 0.0011, P = 0.0010
Identities = 28/71 (39%), Positives = 37/71 (52%), Frame = +1
Query: 127 RLRRDHAVRGQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRRRRLRLRRRR--RSS 300
R RR + R +SRRR R+ P R RR ++++R RRRR RRRR R
Sbjct: 22 RRRRRRSRRRRSRRR--RRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRRR 79
Query: 301 ELRAPPRARAKAR 339
R+P R R + R
Sbjct: 80 RSRSPYRRRRRRR 92
Score = 88 (31.0 bits), Expect = 0.0054, P = 0.0054
Identities = 24/59 (40%), Positives = 29/59 (49%), Frame = +1
Query: 115 RLFRRLRRDHAVRGQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRRRRLRLRRRR 291
R RR RR R SRRR R+ P R RR ++++R RRRR RRRR
Sbjct: 55 RRSRRRRRYRRRRSYSRRRRYRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRR 113
Score = 87 (30.6 bits), Expect = 0.0071, P = 0.0071
Identities = 23/63 (36%), Positives = 32/63 (50%), Frame = +1
Query: 154 GQSRRRFDEEERQHEQPLTVRTSSRRHHHQQQQRRRRRRLRLRRRRRSSELRAPPRARAK 333
G+ RRR R + R+ S ++++RRR RR R RRRRS R R R +
Sbjct: 21 GRRRRRRSRRRRSRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRRRR 80
Query: 334 ARS 342
+RS
Sbjct: 81 SRS 83
Score = 78 (27.5 bits), Expect = 0.95, P = 0.61
Identities = 19/44 (43%), Positives = 25/44 (56%), Frame = +1
Query: 214 RTSSRRHHHQQQQRRRRRRLRLRRRRRSSELRAPPRARAKARSS 345
R SRR ++++RRRR R RRRRR R+ R R + R S
Sbjct: 25 RRRSRRRRSRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRS 68
Score = 73 (25.7 bits), Expect = 5.6, P = 1.0
Identities = 16/32 (50%), Positives = 21/32 (65%), Frame = +1
Query: 244 QQQRRRRRRLRLRRRRRSSELRAPPRARAKAR 339
+++RRR RR R RRRRR R+P R R + R
Sbjct: 22 RRRRRRSRRRRSRRRRRRRRSRSPYRRRRRRR 53
Minus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.00046, P = 0.00046
Identities = 35/77 (45%), Positives = 37/77 (48%), Frame = -1
Query: 326 RARGGARSSEERRRRRRRSRRRRRLCCCWWWWRLEDVRTVRGCSC*RSSSSNRRRL*PRT 147
R R + RRRRRRRSRRRRR + R R R RS S RRR R
Sbjct: 39 RRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRRR-----RSRSPYRRRRRRRR 93
Query: 146 A*SRRRRRKRRETSSDR 96
SRRRRR RR S R
Sbjct: 94 RRSRRRRRYRRRRSYSR 110
Score = 81 (28.5 bits), Expect = 0.0015, Sum P(2) = 0.0015
Identities = 31/72 (43%), Positives = 35/72 (48%), Frame = -1
Query: 320 RGGARSSEERRRRRRRSRRRRRLCCCWWWWRLEDVRTVRGCSC*RSSSSNRRRL*PRTA* 141
+GG R RR RRRRSRRRRR +R R R S RRR R +
Sbjct: 19 KGGRR--RRRRSRRRRSRRRRRRRRSRSPYRRRRRRR-------RRRSRRRRRYRRRRSY 69
Query: 140 SRRRRRKRRETS 105
SRRRR +RR S
Sbjct: 70 SRRRRYRRRRRS 81
Score = 76 (26.8 bits), Expect = 1.9, P = 0.84
Identities = 32/80 (40%), Positives = 37/80 (46%), Frame = -1
Query: 320 RGGARSSEERRRRRRRSRRRRRLCCCWWWWRLEDVR--TVRGCSC*RSSSSNRRRL*PRT 147
+GG R RRRR R RRRRR + R R + R R S +RRR R
Sbjct: 19 KGGRRRRRRSRRRRSRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRRRRSYSRRRRYRRR 78
Query: 146 A*SR---RRRRKRRETSSDR 96
SR RRRR+RR S R
Sbjct: 79 RRSRSPYRRRRRRRRRRSRR 98
Score = 57 (20.1 bits), Expect = 4.6, Sum P(2) = 0.99
Identities = 15/28 (53%), Positives = 17/28 (60%), Frame = -1
Query: 332 FARARGGARSSEERRRRRRRS--RRRRR 255
+ R R +R RRRRR RS RRRRR
Sbjct: 63 YRRRRSYSRRRRYRRRRRSRSPYRRRRR 90
Score = 49 (17.2 bits), Expect = 4.6, Sum P(2) = 0.99
Identities = 13/25 (52%), Positives = 15/25 (60%), Frame = -1
Query: 188 RSSSSNRRRL*PRTA*SRRRRRKRR 114
R S RRR R + SRRRR +RR
Sbjct: 93 RRRSRRRRRYRRRRSYSRRRRYRRR 117
Score = 43 (15.1 bits), Expect = 0.0015, Sum P(2) = 0.0015
Identities = 10/21 (47%), Positives = 11/21 (52%), Frame = -2
Query: 70 RGDRSPYESRRVRDSVRGREK 8
R RSPY RR R R R +
Sbjct: 79 RRSRSPYRRRRRRRRRRSRRR 99
>gi|81286|pir||S22697 extensin - Volvox carteri (fragment)
>gi|21992|emb|CAA46283.1| (X65165) extensin [Volvox carteri]
Length = 464
Frame 3 hits (HSPs): _______________
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | 464
0 150 300 450
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 16/34 (47%), Positives = 21/34 (61%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTPGATASAS 329
+PPPP + P PP PPP+ P P ATA+A+
Sbjct: 374 SPPPPPASSPPPPPRPPPPSPPPSPPPPATAAAN 407
Score = 78 (27.5 bits), Expect = 0.020, Sum P(3) = 0.020
Identities = 11/22 (50%), Positives = 17/22 (77%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTP 293
+PPPP ++ +P PP+ PPP+ P
Sbjct: 321 SPPPPRSSPSPPPPSPPPPSPP 342
Score = 75 (26.4 bits), Expect = 0.047, Sum P(3) = 0.046
Identities = 14/34 (41%), Positives = 20/34 (58%), Frame = +3
Query: 228 TPPPPTTTKTPSPPA-TPPPTTPLLRTPGATASA 326
+PPPP ++ +P PP +PPP P P AS+
Sbjct: 349 SPPPPRSSPSPPPPVVSPPPPPPRASPPPPPASS 382
Score = 75 (26.4 bits), Expect = 0.047, Sum P(3) = 0.046
Identities = 15/37 (40%), Positives = 18/37 (48%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPP-TTPLLRTPGATASASES 335
+PPPP PSPP +PPP T P S S +
Sbjct: 382 SPPPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSRA 418
Score = 72 (25.3 bits), Expect = 0.11, Sum P(3) = 0.11
Identities = 15/38 (39%), Positives = 22/38 (57%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRT----PGATASAS 329
+PPPP ++ +P PP+ PPP+ P R P +S S
Sbjct: 321 SPPPPRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPS 358
Score = 68 (23.9 bits), Expect = 0.34, Sum P(3) = 0.29
Identities = 13/35 (37%), Positives = 20/35 (57%), Frame = +3
Query: 228 TPPPPTTTKTPSPP-ATPPPTTPLLRTPGATASAS 329
+PPPP + +P PP ++P P P++ P AS
Sbjct: 340 SPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRAS 374
Score = 67 (23.6 bits), Expect = 0.46, Sum P(3) = 0.37
Identities = 11/27 (40%), Positives = 13/27 (48%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP + P PP PP P P
Sbjct: 358 SPPPPVVSPPPPPPRASPPPPPASSPP 384
Score = 64 (22.5 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 12/29 (41%), Positives = 17/29 (58%), Frame = +3
Query: 231 PPPPTTTKTPSPP---ATPPPTTPLLRTP 308
PPPP + +P PP ++PPP P +P
Sbjct: 292 PPPPRVSPSPPPPQPVSSPPPPPPPRPSP 320
Score = 62 (21.8 bits), Expect = 1.7, Sum P(3) = 0.83
Identities = 11/24 (45%), Positives = 15/24 (62%), Frame = +3
Query: 231 PPPPTTTKTPSPPAT---PPPTTP 293
PPPP + +P PP + PPP +P
Sbjct: 313 PPPPRPSPSPPPPRSSPSPPPPSP 336
Score = 61 (21.5 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 16/33 (48%), Positives = 19/33 (57%), Frame = +2
Query: 14 SSSHRVTHSPRLVRT-PIPPSHTQPAPPPDPTMS 112
S S +T SP L +T P PP P+PPP P S
Sbjct: 256 SPSPVLTASPPLPKTSPPPPPRVPPSPPP-PVAS 288
Score = 60 (21.1 bits), Expect = 2.9, Sum P(3) = 0.95
Identities = 12/25 (48%), Positives = 14/25 (56%), Frame = +3
Query: 231 PPPPTTTKTPSPPAT----PPPTTP 293
PPPP+ +P PPAT PP P
Sbjct: 389 PPPPSPPPSPPPPATAAANPPSPAP 413
Score = 59 (20.8 bits), Expect = 3.6, Sum P(3) = 0.97
Identities = 9/20 (45%), Positives = 12/20 (60%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPT 287
+PPPP +P PP P P+
Sbjct: 300 SPPPPQPVSSPPPPPPPRPS 319
Score = 59 (20.8 bits), Expect = 3.6, Sum P(3) = 0.97
Identities = 14/34 (41%), Positives = 17/34 (50%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTPGATASAS 329
+PPPP +P PP PPP P P +S S
Sbjct: 300 SPPPPQPVSSPPPP--PPPR-PSPSPPPPRSSPS 330
Score = 55 (19.4 bits), Expect = 0.0096, Sum P(2) = 0.0095
Identities = 11/24 (45%), Positives = 14/24 (58%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPTMS 112
PR+ +P PP P PPP P +S
Sbjct: 276 PRVPPSP-PPPVASPPPPPPPRVS 298
Score = 55 (19.4 bits), Expect = 0.0096, Sum P(2) = 0.0095
Identities = 11/27 (40%), Positives = 15/27 (55%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDPTMSRAS 121
P+ V +P PP +P+P P P S S
Sbjct: 304 PQPVSSPPPPPPPRPSPSPPPPRSSPS 330
Score = 54 (19.0 bits), Expect = 0.012, Sum P(2) = 0.012
Identities = 10/19 (52%), Positives = 12/19 (63%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP 97
PR +P PPS P+PPP
Sbjct: 325 PRSSPSPPPPSPPPPSPPP 343
Score = 52 (18.3 bits), Expect = 0.019, Sum P(2) = 0.019
Identities = 11/25 (44%), Positives = 14/25 (56%), Frame = +2
Query: 41 PRLVRTPIPPSH-TQPAPPPDPTMS 112
PR+ +P PP + P PPP P S
Sbjct: 295 PRVSPSPPPPQPVSSPPPPPPPRPS 319
Score = 52 (18.3 bits), Expect = 1.3, Sum P(2) = 0.74
Identities = 9/19 (47%), Positives = 10/19 (52%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP 97
P +V P PP P PPP
Sbjct: 361 PPVVSPPPPPPRASPPPPP 379
Score = 51 (18.0 bits), Expect = 0.0051, Sum P(3) = 0.0051
Identities = 8/19 (42%), Positives = 12/19 (63%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP 97
PR+ +P PP+ +PPP
Sbjct: 226 PRVSTSPPPPARVSSSPPP 244
Score = 51 (18.0 bits), Expect = 0.024, Sum P(2) = 0.024
Identities = 10/22 (45%), Positives = 12/22 (54%), Frame = +2
Query: 56 TPIPPSHTQPAPPPDPTMSRAS 121
+P PPS P P P P R+S
Sbjct: 335 SPPPPSPPPPRPSPSPPPPRSS 356
Score = 50 (17.6 bits), Expect = 0.0064, Sum P(3) = 0.0064
Identities = 13/24 (54%), Positives = 14/24 (58%), Frame = +2
Query: 26 RVTHSPRLVRTPIPP-SHTQPAPPP 97
R+T SP V T PP T P PPP
Sbjct: 253 RIT-SPSPVLTASPPLPKTSPPPPP 276
Score = 50 (17.6 bits), Expect = 0.031, Sum P(2) = 0.030
Identities = 13/34 (38%), Positives = 17/34 (50%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP---DPTMSRASSAAS 133
PR +P PPS P+PPP P+ S+ S
Sbjct: 325 PRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPS 358
Score = 49 (17.2 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 13/30 (43%), Positives = 15/30 (50%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPP--DPTMSRASS 124
PR +P PP + P PPP P ASS
Sbjct: 353 PRSSPSPPPPVVSPPPPPPRASPPPPPASS 382
Score = 48 (16.9 bits), Expect = 0.049, Sum P(2) = 0.048
Identities = 8/18 (44%), Positives = 10/18 (55%), Frame = +2
Query: 59 PIPPSHTQPAPPPDPTMS 112
P PP P+PPP +S
Sbjct: 291 PPPPPRVSPSPPPPQPVS 308
Score = 48 (16.9 bits), Expect = 0.049, Sum P(2) = 0.048
Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAPPPDP 103
PR +P PP + PPP P
Sbjct: 316 PRPSPSPPPPRSSPSPPPPSP 336
Score = 47 (16.5 bits), Expect = 0.062, Sum P(2) = 0.060
Identities = 9/19 (47%), Positives = 10/19 (52%), Frame = +2
Query: 59 PIPPSHTQPAPPP-DPTMS 112
P PP P+PPP P S
Sbjct: 291 PPPPPRVSPSPPPPQPVSS 309
Score = 46 (16.2 bits), Expect = 5.3, Sum P(2) = 1.0
Identities = 14/37 (37%), Positives = 16/37 (43%), Frame = +2
Query: 26 RVTHSPRLVRT-PIPPSHTQPAPPPDPTMSRASSAAS 133
R + SP R+ P PP PPP P S AS
Sbjct: 345 RPSPSPPPPRSSPSPPPPVVSPPPPPPRASPPPPPAS 381
Score = 44 (15.5 bits), Expect = 0.12, Sum P(2) = 0.12
Identities = 12/38 (31%), Positives = 19/38 (50%), Frame = +2
Query: 29 VTHSPRLVRT---PIPPSHTQPAPPPDPTMSRASSAAS 133
VT + +V+T P PP +PPP +S + A+
Sbjct: 209 VTAAAVVVQTTPSPPPPPRVSTSPPPPARVSSSPPPAT 246
Score = 41 (14.4 bits), Expect = 0.048, Sum P(3) = 0.047
Identities = 14/35 (40%), Positives = 17/35 (48%), Frame = +2
Query: 26 RVTHSPR-LVRTPIPPSHTQPAP-----PPDPTMS 112
RV+ SP R+P P T P+P PP P S
Sbjct: 237 RVSSSPPPATRSPPPRRITSPSPVLTASPPLPKTS 271
Score = 41 (14.4 bits), Expect = 0.25, Sum P(2) = 0.22
Identities = 11/25 (44%), Positives = 14/25 (56%), Frame = +3
Query: 66 PRVTLSQHHRPIRRCLAPLPPPPAR 140
PRV+ S P + +P PPPP R
Sbjct: 295 PRVSPSPP--PPQPVSSPPPPPPPR 317
Score = 37 (13.0 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 6/9 (66%), Positives = 7/9 (77%), Frame = +3
Query: 114 APLPPPPAR 140
+P PPPP R
Sbjct: 288 SPPPPPPPR 296
>gi|6714291|gb|AAF25987.1|AC013354_6 (AC013354) F15H18.16 [Arabidopsis
thaliana]
Length = 361
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 361
0 150 300
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 0.00061, P = 0.00061
Identities = 22/56 (39%), Positives = 37/56 (66%), Frame = +2
Query: 332 KRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSKK 499
K+ W+EEEH FL ++ G+G WR I + ++ T+T Q+ SHAQK+F + +++
Sbjct: 63 KQREKWSEEEHDRFLEAIKLYGRG-WRQIQE-HIGTKTAVQIRSHAQKFFSKMAQE 116
>gi|100213|pir||S14972 extensin class I (clone w6) - tomato
>gi|1345536|emb|CAA39214.1| (X55683) extensin (class I)
[Lycopersicon esculentum]
Length = 90
Frame 3 hits (HSPs): _______________________________________________
Frame 2 hits (HSPs): ____________________________________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | | | 90
0 20 40 60 80
__________________
Annotated Domains:
DOMO DM00215: PROLINE-RICHPROTEIN3 7..90
__________________
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.0014, Sum P(2) = 0.0014
Identities = 11/27 (40%), Positives = 17/27 (62%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP+ PP + ++P
Sbjct: 21 SPPPPYVYKSPPPPSPSPPPPYVYKSP 47
Score = 69 (24.3 bits), Expect = 0.84, P = 0.57
Identities = 11/27 (40%), Positives = 17/27 (62%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP+ PP + ++P
Sbjct: 5 SPPPPYVYKSPPPPSPSPPPPYVYKSP 31
Score = 66 (23.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 11/27 (40%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPPP K+P PP+ PP ++P
Sbjct: 37 SPPPPYVYKSPPPPSHSPPPPYYYKSP 63
Score = 66 (23.2 bits), Expect = 0.0032, Sum P(2) = 0.0032
Identities = 23/65 (35%), Positives = 29/65 (44%), Frame = +3
Query: 114 APLPPPPA--RSCCSGSESSSIR*GRASA*TTSHSTNIL*TPPPPTTTKTPSPPATPPPT 287
+P PPPP +S S S S SHS PPPP K+P PP+ PP
Sbjct: 19 SPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSHS------PPPPYYYKSPPPPSPSPPP 72
Query: 288 TPLLRTP 308
++P
Sbjct: 73 PYYYKSP 79
Score = 63 (22.2 bits), Expect = 0.0019, Sum P(2) = 0.0019
Identities = 11/20 (55%), Positives = 15/20 (75%), Frame = +3
Query: 228 TPPPPTTTKTPSPPA-TPPP 284
+PPPP K+P PP+ +PPP
Sbjct: 69 SPPPPYYYKSPPPPSPSPPP 88
Score = 57 (20.1 bits), Expect = 0.0019, Sum P(2) = 0.0019
Identities = 12/29 (41%), Positives = 17/29 (58%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAP-----PPDPTMS 112
P + ++P PPSH+ P P PP P+ S
Sbjct: 41 PYVYKSPPPPSHSPPPPYYYKSPPPPSPS 69
Score = 54 (19.0 bits), Expect = 2.8, Sum P(2) = 0.94
Identities = 11/23 (47%), Positives = 16/23 (69%), Frame = +3
Query: 228 TPPPPTTTKTPSPP---ATPPPTTP 293
+PPPP+ + P PP +PPP +P
Sbjct: 62 SPPPPSPS--PPPPYYYKSPPPPSP 84
Score = 47 (16.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 11/29 (37%), Positives = 16/29 (55%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAP-----PPDPTMS 112
P + ++P PPS + P P PP P+ S
Sbjct: 9 PYVYKSPPPPSPSPPPPYVYKSPPPPSPS 37
Score = 47 (16.5 bits), Expect = 0.020, Sum P(2) = 0.019
Identities = 11/29 (37%), Positives = 16/29 (55%), Frame = +2
Query: 41 PRLVRTPIPPSHTQPAP-----PPDPTMS 112
P + ++P PPS + P P PP P+ S
Sbjct: 25 PYVYKSPPPPSPSPPPPYVYKSPPPPSHS 53
Score = 40 (14.1 bits), Expect = 0.0014, Sum P(2) = 0.0014
Identities = 7/17 (41%), Positives = 10/17 (58%), Frame = +2
Query: 56 TPIPPSHTQPAPPPDPT 106
+P PP + PPP P+
Sbjct: 5 SPPPPYVYKSPPPPSPS 21
>gi|10177075|dbj|BAB10517.1| (AB005238) gene_id:MKP11.15~unknown protein
[Arabidopsis thaliana]
Length = 385
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 385
0 150 300
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 0.00068, P = 0.00068
Identities = 24/59 (40%), Positives = 40/59 (67%), Frame = +2
Query: 323 RERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSKK 499
+ER+R WT+EEHK F+ L+ G+ WR I + +V ++T Q+ SHAQK+F + +++
Sbjct: 51 KERER---WTDEEHKKFVEALKLYGRA-WRRIEE-HVGSKTAVQIRSHAQKFFSKVARE 104
>gi|8953721|dbj|BAA98084.1| (AB025606) contains similarity to MYB-related
DNA-binding protein~gene_id:F6N7.15 [Arabidopsis thaliana]
Length = 334
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 334
0 150 300
Plus Strand HSPs:
Score = 112 (39.4 bits), Expect = 0.0010, P = 0.0010
Identities = 32/87 (36%), Positives = 45/87 (51%), Frame = +2
Query: 236 TTNNNKDAVAAGYASADDAAPQNSGRHRERER--KRGVPWTEEEHKLFLVGLQKVGKGDW 409
TT++ AVA A + S + R+ K WTE EH FL LQ + DW
Sbjct: 21 TTSSTAVAVADVTAMVSSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDR-DW 79
Query: 410 RGISKNYVKTRTPTQVASHAQKYFLRRSK 496
+ I ++ ++T Q+ SHAQKYFL+ K
Sbjct: 80 KKIEA-FIGSKTVIQIRSHAQKYFLKVQK 107
>gi|2136255|pir||S67922 telomeric DNA binding protein 1 - human (fragment)
Length = 98
Frame 2 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 98
0 20 40 60 80
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 19/54 (35%), Positives = 27/54 (50%), Frame = +2
Query: 296 PQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQV 457
P +HR R+R+ W EE K G++K G+G+W I +Y K T V
Sbjct: 32 PVTPEKHRARKRQA---WLWEEDKNLRSGVRKYGEGNWSKILLHY-KFNNRTSV 81
Score = 39 (13.7 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/26 (34%), Positives = 13/26 (50%), Frame = +2
Query: 17 SSHRVTHSPRLVRTPIPPSHTQPAPP 94
S+ + S R + IP S +QP P
Sbjct: 10 STKKKKESRRATESRIPVSKSQPVTP 35
>gi|7441829|pir||T09854 proline-rich cell wall protein - upland cotton
>gi|435039|gb|AAA79360.1| (L17308) proline-rich cell wall protein
[Gossypium hirsutum]
Length = 214
Frame 3 hits (HSPs): __________________________________
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.69, P = 0.50
Identities = 18/29 (62%), Positives = 20/29 (68%), Frame = +3
Query: 234 PPPTTTKTPSPPA-TPPPTTPLLRTPGAT 317
PP +T TP+PPA TPPPTT TP AT
Sbjct: 29 PPTSTPATPTPPASTPPPTTQAPPTPTAT 57
Score = 84 (29.6 bits), Expect = 0.0012, Sum P(2) = 0.0012
Identities = 17/34 (50%), Positives = 18/34 (52%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTPGATASAS 329
TPPP + PPATPPP TP TP AS
Sbjct: 112 TPPPASPPPATPPPATPPPATPPPATPPPAPLAS 145
Score = 82 (28.9 bits), Expect = 0.0021, Sum P(2) = 0.0021
Identities = 15/27 (55%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPP T PPATPPP TP TP
Sbjct: 107 SPPPATPPPASPPPATPPPATPPPATP 133
Score = 82 (28.9 bits), Expect = 0.0021, Sum P(2) = 0.0021
Identities = 18/36 (50%), Positives = 20/36 (55%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPL---LRTPGATASA 326
+PPP T PPATPPP TP L +P AT A
Sbjct: 117 SPPPATPPPATPPPATPPPATPPPAPLASPPATVPA 152
Score = 82 (28.9 bits), Expect = 0.071, Sum P(2) = 0.069
Identities = 16/27 (59%), Positives = 18/27 (66%), Frame = +3
Query: 234 PPPTTTKTPS--PPATPPPTTPLLRTP 308
PPP +T PS PPATPPP +P TP
Sbjct: 77 PPPVSTPPPSSPPPATPPPASPPPATP 103
Score = 80 (28.2 bits), Expect = 0.67, Sum P(2) = 0.49
Identities = 17/33 (51%), Positives = 19/33 (57%), Frame = +3
Query: 234 PPPTTTKTPSPPATPPPTT---PLLRTPGATAS 323
PPPTT P+P ATPPP + P P TAS
Sbjct: 44 PPPTTQAPPTPTATPPPVSTPPPTSSPPPVTAS 76
Score = 78 (27.5 bits), Expect = 0.0074, Sum P(2) = 0.0073
Identities = 14/27 (51%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPP T PPATPPP +P TP
Sbjct: 97 SPPPATPPPASPPPATPPPASPPPATP 123
Score = 78 (27.5 bits), Expect = 0.0074, Sum P(2) = 0.0073
Identities = 14/27 (51%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
TPPP + PPA+PPP TP TP
Sbjct: 102 TPPPASPPPATPPPASPPPATPPPATP 128
Score = 78 (27.5 bits), Expect = 0.19, Sum P(2) = 0.17
Identities = 14/27 (51%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
+PPP T PPATPPP +P TP
Sbjct: 87 SPPPATPPPASPPPATPPPASPPPATP 113
Score = 74 (26.0 bits), Expect = 0.024, Sum P(2) = 0.023
Identities = 13/27 (48%), Positives = 16/27 (59%), Frame = +3
Query: 228 TPPPPTTTKTPSPPATPPPTTPLLRTP 308
TPPP + PPA+PPP TP +P
Sbjct: 92 TPPPASPPPATPPPASPPPATPPPASP 118
Score = 74 (26.0 bits), Expect = 0.77, Sum P(2) = 0.54
Identities = 15/31 (48%), Positives = 19/31 (61%), Frame = +3
Query: 228 TPPP----PTTTKTPSPPATPPPTTPLLRTP 308
TPPP P T +P P +TPPP++P TP
Sbjct: 63 TPPPTSSPPPVTASPPPVSTPPPSSPPPATP 93
Score = 67 (23.6 bits), Expect = 5.8, Sum P(2) = 1.0
Identities = 13/30 (43%), Positives = 18/30 (60%), Frame = +3
Query: 228 TPPPPTTTKTP---SPPATPPPTTPLLRTP 308
+PPP T + P PP++PPP TP +P
Sbjct: 69 SPPPVTASPPPVSTPPPSSPPPATPPPASP 98
Score = 62 (21.8 bits), Expect = 0.73, Sum P(2) = 0.52
Identities = 18/39 (46%), Positives = 18/39 (46%), Frame = +3
Query: 228 TPPPPTTTKTP--SPPATPP---PT-TPLLRTPGATASA 326
TPPP T P SPPAT P P TPL P A
Sbjct: 132 TPPPATPPPAPLASPPATVPAISPVQTPLTSPPAPPTEA 170
Score = 61 (21.5 bits), Expect = 0.0012, Sum P(2) = 0.0012
Identities = 16/28 (57%), Positives = 16/28 (57%), Frame = +2
Query: 14 SSSHRVTHSPRLVRTPIPPSHTQPAPPP 97
SS VT SP V TP PPS PA PP
Sbjct: 68 SSPPPVTASPPPVSTP-PPSSPPPATPP 94
Score = 54 (19.0 bits), Expect = 0.0062, Sum P(2) = 0.0062
Identities = 18/40 (45%), Positives = 19/40 (47%), Frame = +2
Query: 14 SSSHRVTHSPRLVRTPIP----PSHTQPAPPPDPTMSRAS 121
SS VT SP V TP P P+ PA PP T AS
Sbjct: 68 SSPPPVTASPPPVSTPPPSSPPPATPPPASPPPATPPPAS 107
Score = 47 (16.5 bits), Expect = 0.032, Sum P(2) = 0.031
Identities = 15/28 (53%), Positives = 16/28 (57%), Frame = +2
Query: 14 SSSHRVTHSPRLVRTPIPPSHTQPAPPP 97
SS VT SP V TP PPS +PPP
Sbjct: 68 SSPPPVTASPPPVSTP-PPS----SPPP 90
Score = 46 (16.2 bits), Expect = 0.040, Sum P(2) = 0.040
Identities = 10/20 (50%), Positives = 11/20 (55%), Frame = +2
Query: 56 TPIPPSHTQPAP---PPDPT 106
TP PP+ T P PP PT
Sbjct: 36 TPTPPASTPPPTTQAPPTPT 55
Score = 42 (14.8 bits), Expect = 0.10, Sum P(2) = 0.097
Identities = 12/29 (41%), Positives = 13/29 (44%), Frame = +2
Query: 56 TPIPPSHTQPAPP---PDPTMSRASSAAS 133
T PP+ T PP P PT S AS
Sbjct: 48 TQAPPTPTATPPPVSTPPPTSSPPPVTAS 76
Score = 41 (14.4 bits), Expect = 0.23, Sum P(2) = 0.20
Identities = 9/19 (47%), Positives = 10/19 (52%), Frame = +2
Query: 65 PPSHTQPAPPPDPTMSRAS 121
PP+ PA PP T AS
Sbjct: 99 PPATPPPASPPPATPPPAS 117
Score = 39 (13.7 bits), Expect = 0.21, Sum P(2) = 0.19
Identities = 8/14 (57%), Positives = 9/14 (64%), Frame = +2
Query: 56 TPIPPSHTQPAPPP 97
TP PP+ PA PP
Sbjct: 102 TP-PPASPPPATPP 114
Score = 39 (13.7 bits), Expect = 0.21, Sum P(2) = 0.19
Identities = 8/17 (47%), Positives = 9/17 (52%), Frame = +2
Query: 56 TPIPPSHTQPAPPPDPT 106
T P + T PA P PT
Sbjct: 31 TSTPATPTPPASTPPPT 47
WARNING: HSPs involving 798 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.95
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.327 0.137 0.433
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.314 0.128 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.321 0.130 0.373
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.339 0.141 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.328 0.144 0.438
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.348 0.153 0.515
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 172 171 10. 75 3 12 22 0.11 34
31 0.11 37
+2 0 172 171 10. 75 3 12 23 0.11 34
31 0.11 37
+1 0 172 171 10. 75 3 12 22 0.11 34
31 0.11 37
-1 0 172 171 10. 75 3 12 22 0.11 34
31 0.11 37
-2 0 172 171 10. 75 3 12 22 0.11 34
31 0.11 37
-3 0 172 171 10. 75 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 848
No. of states in DFA: 576 (57 KB)
Total size of DFA: 178 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 261.19u 1.30s 262.49t Elapsed: 00:00:45
Total cpu time: 261.25u 1.34s 262.59t Elapsed: 00:00:45
Start: Fri Feb 8 16:27:31 2002 End: Fri Feb 8 16:28:16 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000