Cancer Genome Anatomy Project

NCI > CGAP > GAI > SNP Maps > Chr 4 > SNPs Localized to Interval 4

D4S391 - D4S405 39.7 cM - 54.1 cM     /     118.08 cR - 196.19 cR

Chromosome:	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Interval: all 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
Tissue:	any adipose adrenal cortex adrenal medulla b-cell blood bone bone marrow brain breast / mammary gland cerebellum cerebrum cervix colon ear (inner) esophagus eye gastrointestinal tract genitourinary system germ cell head and neck heart kidney liver lung lymph node muscle nervous ovary pancreas pancreatic islet parathyroid peripheral nervous system pineal gland pituitary gland placenta prostate retina salivary gland skin soft tissue spleen stomach synovium t-cell testis thymus thyroid uterus vascular whole body uncharacterized tissue [ ? ]
Histology:	any cancer +/- normal normal +/- cancer cancer, not normal normal, not cancer [ ? ]

 

UniGene	Gene Symbol	Description	SNP IDs	SNP Summary	CGAP Gene Info
Validated SNPs
Hs.283378	RELL1	RELT-like 1	CGAP-C-58733	SNPs	Gene Info
Hs.476517	FAM114A1	Family with sequence similarity 114, member A1	CGAP-C-58394 CGAP-C-61602 CGAP-C-268819 CGAP-C-607899 CGAP-C-621694	SNPs	Gene Info
Hs.176503	TBC1D1	TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	CGAP-C-54594	SNPs	Gene Info
Hs.272251	KLHL5	Kelch-like 5 (Drosophila)	CGAP-C-60530	SNPs	Gene Info
Hs.298658	KLF3	Kruppel-like factor 3 (basic)	CGAP-C-49106	SNPs	Gene Info
Hs.507475	RFC1	Replication factor C (activator 1) 1, 145kDa	CGAP-C-627752 CGAP-C-627754	SNPs	Gene Info
Hs.438482	WDR19	WD repeat domain 19	CGAP-C-50100	SNPs	Gene Info
Hs.658884	-	Transcribed locus	CGAP-C-53977	SNPs	Gene Info
Hs.572518	UGDH	UDP-glucose dehydrogenase	CGAP-C-611836	SNPs	Gene Info
Hs.715721	-	CDNA FLJ26764 fis, clone PRS02668	CGAP-C-51169	SNPs	Gene Info
Hs.654594	RHOH	Ras homolog gene family, member H	CGAP-C-242110	SNPs	Gene Info
Predicted SNPs
Hs.479439	PCDH7	Protocadherin 7	CGAP-C-2401962 CGAP-C-2401964	SNPs	Gene Info
Hs.479451	ARAP2	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	CGAP-C-2404292	SNPs	Gene Info
Hs.476517	FAM114A1	Family with sequence similarity 114, member A1	CGAP-C-2484221 CGAP-C-2484222 CGAP-C-2484223 CGAP-C-2484224	SNPs	Gene Info
Hs.107527	C4orf19	Chromosome 4 open reading frame 19	CGAP-C-2460219 CGAP-C-2460220	SNPs	Gene Info
Hs.633187	-	CDNA FLJ11313 fis, clone PLACE1010106, highly similar to Homo sapiens mRNA; cDNA DKFZp586M1418	CGAP-C-2404229 CGAP-C-2404230	SNPs	Gene Info
Hs.350966	PTTG1	Pituitary tumor-transforming 1	CGAP-C-2397584 CGAP-C-2397585 CGAP-C-2397587 CGAP-C-2397590 CGAP-C-2397594 CGAP-C-2397596 CGAP-C-2397600 CGAP-C-2397601	SNPs	Gene Info
Hs.176503	TBC1D1	TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	CGAP-C-2414483 CGAP-C-2414492 CGAP-C-2414494 CGAP-C-2414495 CGAP-C-2414496	SNPs	Gene Info
Hs.298658	KLF3	Kruppel-like factor 3 (basic)	CGAP-C-2483565	SNPs	Gene Info
Hs.23363	PGM2	Phosphoglucomutase 2	CGAP-C-2442752 CGAP-C-2442753 CGAP-C-2442755	SNPs	Gene Info
Hs.507475	RFC1	Replication factor C (activator 1) 1, 145kDa	CGAP-C-2462531	SNPs	Gene Info
Hs.438482	WDR19	WD repeat domain 19	CGAP-C-2482528	SNPs	Gene Info
Hs.90756	KLB	Klotho beta	CGAP-C-2395477	SNPs	Gene Info
Hs.331431	PDS5A	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	CGAP-C-2479385	SNPs	Gene Info
Hs.518727	RBM47	RNA binding motif protein 47	CGAP-C-2460660	SNPs	Gene Info
Hs.572518	UGDH	UDP-glucose dehydrogenase	CGAP-C-2393915 CGAP-C-2393917 CGAP-C-2393922 CGAP-C-2393924 CGAP-C-2393925	SNPs	Gene Info
Hs.654594	RHOH	Ras homolog gene family, member H	CGAP-C-2432983 CGAP-C-2432984	SNPs	Gene Info

Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov )