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Submitted SNP(ss) Details: ss876075           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-29106
RefSNP(rs#)rs1065965
Submitted Batch IDOVLP-000804-1
Submitted DateSep 01, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 1 2000 12:00:00:000AM
Resource Links
GenBank AccessionAC012250.3
AL359498.3
Submitted Gene NameN.D
Submitted Gene IDN.D.
Submitted SNP SynonymsN.D
Submitted linkoutN.D
Submission reportview
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
SNP Classsingle base
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC012250 SequenceAccession1:AC012250 SequenceVersion1:3 SequenceContigName1:Contig5 SequenceContigPosition1:5051 SequenceLocalName2:AL359498 SequenceAccession2:AL359498 SequenceVersion2:3 SequenceContigName2:Contig7 SequenceContigPosition2:1521 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss876075|allelePos=1001|len=2001|taxid=9606|alleles='A/G'|mol=Genomic
 ggaaaaaagg aacaaagtaa ctataaggca cacagaaaac aataagaaaa tggtaatagt
 aagtcctcta tcagtaatta ctttcgatgt aaatggatta aactcagcaa tcaaaagaca
 taaagtagtt aaactgactt ataaaaacaa gatctaacta tatgctgtct acaagagact
 cgttttagac ataaggacat acataaatga aaagtaaaag aacggacaaa gatattccat
 gcaataggct aaaagtgata gaatagaaaa agatttttca tgcaaatggt aaccaaagac
 agcaaggtga ttatataatt atattagaaa aaatatacat taaatcaaaa actgtcacaa
 gagacaaaga agacattgta taatgaaaaa agggtcaatt caacaaggaa gatataacaa
 ttataaacat atatgtacct aacagaagag cacccagata tatgaagcaa acattgacag
 aattaaagag aaaaatagac agtaacatga taaggaagag agatttccat accccacttt
 caataatgga taattaatca aacagaaaat cagtaaggaa acagaaaacc tgaacaagac
 tatagaccaa ttggaccaaa tagacatatc tagaataccc tacccaacaa cagaatatac
 attcttctca agtgcgtatg aaacattctt caagacagat cacatgctag gccataaaat
 aagtcttaac aaattcaaga agattaaaat cataccagtt acattttcca actataaagg
 aatagaacta aaaagcagca gcaaaaggaa aactggaaat tcataaatat atgaaaatta
 aacaccatac tcttgaagaa ccaatgggtc aaagaaaaaa tcacagggga attagaaaat
 atcttgagac gaatgaaaat aaagataaag catgccaaaa acttacagga tgcagcaagt
 gttactaaga cagaagttta cagcagcaca ttgcacatgc
 R
 ttaaaaaaaa gaatgatctc aaatcaataa cctaacttta catgtaaaag aactagagaa
 agaacaaact aaacctagag ttatcaaaag gaacaaaatc ataaagatta gagcaaaaac
 aaaggaaata aataattttt aaaatgggga aaaataaaca aaattaagag ttgatttttt
 tcttagttag actagcttag aaaaatagag aagctcaaat aaaaatcaga aatgaaagac
 aagacctaca attgatgaca cataagtaaa aaggattata aaagactaca atgaacaatt
 gtatgccaac aaattggata acctagaaga aattgataca tttctagaaa catataacct
 accaagactg aatcatgaag aaataaaaac tctaaacaga attagagcta gtgaggagat
 tgaatcagta ataaaaaacc tatctacaaa gaaaagccca ggaccacatg gattcactgg
 ataattctac taaacattta aaggagaact aacatcaatg ctttttaaac tttcccccaa
 aattgaagag gacagaacac ttccaaaata attttatgag cctagcatta ccctaatacc
 aaaatcaaag atactacaaa aaaaaaagaa aacaaacaaa caaaaactac agaccaatat
 acctgatgaa tacaggtgca aaaatcctca acaaaatact agcaaatgaa attcaacaat
 atattaaaag gattgtacag caagaccaaa tggaatttat gtttgaaatg caaaaatttt
 gttcagcata tgaaaatcca tcaatataat atcccatgtt aaccacatga tcatctcaat
 gcagaaaaag catttgaaaa attcagcacc ctttcatgat taaaaGAAAA AACACTCAgc
 caggcgtggt ggtggctcat gcctgaaatt ccagcacttt gggaagctga ggcaggtgga
 tcacctgagg tcaggagttc aagaccagcc taatcaacTT

  Submitted Frequency for ss876075 back to top
There is no frequency submission for ss876075.

  dbSNP summary of Genotypes for ss876075 back to top
No sufficient data to compute Hardy-weinberg probability for ss876075.

  Submitted individual genotype for ss876075 back to top
There is no individual genotype data for ss876075.

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Revised: May 25, 2006 1:38 PM .