| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 150419 | hypothetical | BPSS2160 | putative outer membrane porin protein Similar to Burkholderia cepacia major porin protein Opcp1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.7e-15, 31.59% id in 383 aa, and to Ralstonia solanacearum putative outer membrane porin signal peptide protein rsc2855 or rs00250 SWALL:Q8XVH6 (EMBL:AL646072) (389 aa) fasta scores: E(): 7.3e-30, 34.77% id in 394 aa, and to Ralstonia solanacearum putative porin signal peptide protein rsc2933 or rs00157 SWALL:Q8XV98 (EMBL:AL646072) (379 aa) fasta scores: E(): 4.4e-21, 32.46% id in 345 aa | genbank | 52213590 | CAH39644.1 | 359 | 2922210 | 2923289 | |
| 150420 | hypothetical | BPSS2161 | putative MmgE/PrpD family protein Similar to Aeropyrum pernix hypothetical protein Ape2147 SWALL:Q9Y9Z2 (EMBL:AP000063) (479 aa) fasta scores: E(): 1.8e-57, 39.46% id in 446 aa, and to Pyrobaculum aerophilum propionate catabolism protein PrpD pae1717 SWALL:Q8ZWM4 (EMBL:AE009835) (453 aa) fasta scores: E(): 2.4e-50, 36.46% id in 447 aa, and to Corynebacterium glutamicum uncharacterized protein involved in propionate catabolism cgl2538 SWALL:BAB99931 (EMBL:AP005282) (457 aa) fasta scores: E(): 3.2e-39, 31.17% id in 433 aa | genbank | 52213591 | CAH39645.1 | 491 | 2923331 | 2924806 | |
| 150421 | hypothetical | BPSS2162 | putative membrane protein Similar to Bradyrhizobium japonicum Blr1102 protein SWALL:BAC46367 (EMBL:AP005939) (415 aa) fasta scores: E(): 6.4e-18, 28.65% id in 349 aa, and to Rhodobacter sphaeroides quorum sensing OpgC SWALL:Q9FA51 (EMBL:AF016298) (399 aa) fasta scores: E(): 1.1e-16, 29.82% id in 342 aa, and to Rhizobium meliloti hypothetical transmembrane protein smc04381 r03285 or smc04381 SWALL:Q92L11 (EMBL:AL591793) (385 aa) fasta scores: E(): 1.3e-16, 25.38% id in 327 aa | genbank | 52213592 | CAH39646.1 | 375 | 2924882 | 2926009 | |
| 150422 | hypothetical | BPSS2163 | putative membrane protein Similar to Pseudomonas aeruginosa chloramphenicol-sensitive protein RarD or pa3473 SWALL:RARD_PSEAE (SWALL:O68827) (299 aa) fasta scores: E(): 7.6e-52, 54.79% id in 292 aa, and to Haemophilus influenzae hypothetical protein Hi0680 SWALL:Y680_HAEIN (SWALL:Q57389) (298 aa) fasta scores: E(): 3.4e-31, 39% id in 282 aa, and to Haemophilus influenzae hypothetical protein Hi0223 SWALL:Y223_HAEIN (SWALL:P44579) (300 aa) fasta scores: E(): 2.9e-30, 33.9% id in 292 aa | genbank | 52213593 | CAH39647.1 | 297 | 2926408 | 2927301 | |
| 150423 | hypothetical | BPSS2164 | putative acylphosphatase protein Similar to Pyrococcus furiosus putative acylphosphatase pf0283 SWALL:Q8U414 (EMBL:AE010152) (91 aa) fasta scores: E(): 3.1e-11, 49.38% id in 81 aa, and to Ralstonia solanacearum putative acylphosphatase protein rsc0219 or rs00651 SWALL:Q8Y2W3 (EMBL:AL646058) (119 aa) fasta scores: E(): 3.4e-11, 52.87% id in 87 aa, and to Pyrococcus abyssi acylphosphatase pab7421 SWALL:Q9UY47 (EMBL:AJ248288) (91 aa) fasta scores: E(): 9.4e-11, 48.14% id in 81 aa | genbank | 52213594 | CAH39648.1 | 98 | 2927298 | 2927594 | |
| 150424 | hypothetical | BPSS2165 | conserved hypothetical protein Similar to Zymomonas mobilis HpnA protein SWALL:O34285 (EMBL:AJ001401) (337 aa) fasta scores: E(): 1.2e-74, 64.41% id in 326 aa, and to Synechocystis sp. putative dihydroflavonol-4-reductase slr1706 SWALL:DFRA_SYNY3 (SWALL:P73212) (343 aa) fasta scores: E(): 6.6e-42, 43.11% id in 334 aa | genbank | 52213595 | CAH39649.1 | 335 | 2927755 | 2928762 | |
| 150425 | hypothetical | BPSS2166 | hypothetical protein N-terminus is similar to the C-terminal region of Frankia sp. CpI1 hypothetical protein SWALL:Q9AEZ8 (EMBL:AY027524) (471 aa) fasta scores: E(): 2.7e-16, 42.3% id in 416 aa. CDS contains alanine rich region, residues 25 to 413 | genbank | 52213596 | CAH39650.1 | 522 | 2929017 | 2930585 | |
| 150426 | hypothetical | BPSS2167 | putative glycosyl transferase Similar to Synechocystis sp. hypothetical protein slr1566 SWALL:P74597 (EMBL:D90916) (395 aa) fasta scores: E(): 2.2e-66, 48.49% id in 398 aa, and to Anabaena sp. hypothetical protein alr0776 SWALL:Q8YYS0 (EMBL:AP003583) (396 aa) fasta scores: E(): 1.2e-55, 49.74% id in 396 aa | genbank | 52213597 | CAH39651.1 | 396 | 2930811 | 2932001 | |
| 150427 | ispH | hypothetical | BPSS2168 | IspH protein Similar to Escherichia coli IspH protein SWALL:ISPH_ECOLI (SWALL:P22565) (316 aa) fasta scores: E(): 6.2e-59, 53.79% id in 316 aa. Almost identical to the previously sequenced as Burkholderia pseudomallei IspH protein SWALL:ISPH_BURPS (SWALL:Q9ZFL0) (313 aa) fasta scores: E(): 8.1e-113, 99.68% id in 313 aa | genbank | 52213598 | CAH39652.1 | 313 | 2932395 | 2933336 |
| 150428 | hypothetical | BPSS2169 | MoaA/NifB/PqqE family protein Similar to Anabaena sp. hypothetical protein alr4269 SWALL:Q8YPC9 (EMBL:AP003595) (338 aa) fasta scores: E(): 2.6e-79, 56.17% id in 324 aa, and to Streptomyces coelicolor hypothetical protein SCO6766 or SC6A5.15 SWALL:Q9X7W1 (EMBL:AL939129) (340 aa) fasta scores: E(): 1.1e-73, 50.29% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues | genbank | 52213599 | CAH39653.1 | 386 | 2933349 | 2934509 | |
| 150429 | hypothetical | BPSS2170 | conserved hypothetical protein Similar to Anabaena sp. hypothetical protein alr0056 SWALL:Q8Z0N5 (EMBL:AP003581) (120 aa) fasta scores: E(): 1.1e-21, 52.33% id in 107 aa, and to Rhizobium loti hypothetical protein mll2280 SWALL:Q98IR7 (EMBL:AP002999) (137 aa) fasta scores: E(): 2.7e-14, 41.96% id in 112 aa | genbank | 52213600 | CAH39654.1 | 117 | 2934853 | 2935206 | |
| 150430 | hypothetical | BPSS2171 | putative aminotransferase Similar to Pseudomonas aeruginosa probable aminotransferase pa5523 SWALL:Q9HT50 (EMBL:AE004964) (450 aa) fasta scores: E(): 1.3e-107, 61.76% id in 442 aa. C-terminus is similar to the C-terminal region of Escherichia coli glutamate-1-semialdehyde 2,1-aminomutase HemL or Gsa or PopC SWALL:GSA_ECOLI (SWALL:P23893) (426 aa) fasta scores: E(): 3.3e-26, 31% id in 400 aa | genbank | 52213601 | CAH39655.1 | 452 | 2935765 | 2937123 | |
| 150431 | hypothetical | BPSS2172 | hypothetical protein No significant database matches | genbank | 52213602 | CAH39656.1 | 155 | 2937924 | 2938391 | |
| 150432 | hypothetical | BPSS2172a | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein RSC0023 SWALL:Q8Y3F7 (EMBL:AL646057) (64 aa) fasta scores: E(): 1.3e-16, 72.13% id in 61 aa, and to Pseudomonas putida hypothetical protein SWALL:Q88E28 (EMBL:AE016791) (65 aa) fasta scores: E(): 9.7e-17, 68.11% id in 69 aa | genbank | 52213603 | CAH39657.1 | 68 | 2938659 | 2938865 | |
| 150433 | cstA | hypothetical | BPSS2173 | carbon starvation protein A Similar to Escherichia coli carbon starvation protein A CstA SWALL:CSTA_ECOLI (SWALL:P15078) (701 aa) fasta scores: E(): 1.2e-186, 69.8% id in 702 aa, and to Ralstonia solanacearum probable carbon starvation A transmembrane protein rsc0022 or rs01844 SWALL:Q8Y3F8 (EMBL:AL646057) (686 aa) fasta scores: E(): 1e-208, 79.32% id in 682 aa | genbank | 52213604 | CAH39658.1 | 692 | 2938877 | 2940955 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150434 | hypothetical | BPSS2174 | putative cytochrome P460 Similar to Methylococcus capsulatus cytochrome P460 Cyp SWALL:O87646 (EMBL:AF091435) (161 aa) fasta scores: E(): 8.9e-17, 44.17% id in 163 aa | genbank | 52213605 | CAH39659.1 | 169 | 2941198 | 2941707 | |
| 150435 | hypothetical | BPSS2175 | putative hydrolase Similar to Rhizobium meliloti putative epoxide hydrolase protein rb0209 or smb20216 SWALL:Q92WW8 (EMBL:AL603642) (348 aa) fasta scores: E(): 8.5e-91, 66.76% id in 352 aa, and to Rhizobium loti epoxide hydrolase mlr3288 SWALL:Q98GK2 (EMBL:AP003001) (341 aa) fasta scores: E(): 6.3e-84, 64.24% id in 344 aa | genbank | 52213606 | CAH39660.1 | 350 | 2941725 | 2942777 | |
| 150436 | hypothetical | BPSS2176 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.1e-113, 61.69% id in 496 aa, and to Rhizobium loti hypothetical protein mlr6294 SWALL:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E(): 6e-73, 43.81% id in 493 aa | genbank | 52213607 | CAH39661.1 | 502 | 2943116 | 2944624 | |
| 150437 | hypothetical | BPSS2177 | putative LysR-family transcriptional regulator Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 1.5e-43, 40.82% id in 316 aa, and to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 5.9e-14, 26.12% id in 310 aa | genbank | 52213608 | CAH39662.1 | 318 | 2944785 | 2945741 | |
| 150438 | hypothetical | BPSS2178 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp1249 or rs03193 SWALL:Q8XQH6 (EMBL:AL646083) (127 aa) fasta scores: E(): 1.8e-37, 69.29% id in 127 aa, and to Anabaena sp. hypothetical protein all3014 SWALL:Q8YSS0 (EMBL:AP003591) (120 aa) fasta scores: E(): 4.2e-17, 48.33% id in 120 aa | genbank | 52213609 | CAH39663.1 | 129 | 2946195 | 2946584 | |
| 150439 | hypothetical | BPSS2179 | hypothetical protein No significant database matches | genbank | 52213610 | CAH39664.1 | 150 | 2946843 | 2947295 | |
| 150440 | hypothetical | BPSS2180 | putative membrane protein No significant database matches | genbank | 52213611 | CAH39665.1 | 120 | 2947351 | 2947713 | |
| 150441 | hypothetical | BPSS2181 | conserved hypothetical protein Similar to Caulobacter crescentus hypothetical protein cc2891 SWALL:Q9A4E3 (EMBL:AE005953) (241 aa) fasta scores: E(): 8.7e-45, 48.73% id in 238 aa | genbank | 52213612 | CAH39666.1 | 248 | 2947734 | 2948480 | |
| 150442 | hypothetical | BPSS2182 | putative glycosyl transferase Similar to Bacteriophage P22 bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPP22 (SWALL:P57022) (310 aa) fasta scores: E(): 2.1e-62, 54.45% id in 303 aa, and to Bacteriophage SFX bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPSFX (SWALL:Q9T1D6) (305 aa) fasta scores: E(): 3.7e-61, 54.45% id in 303 aa. CDS is extended at the C-terminus in comparison to orthologues | genbank | 52213613 | CAH39667.1 | 353 | 2948508 | 2949569 | |
| 150443 | hypothetical | BPSS2183 | putative membrane protein Similar to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 7.1e-38, 35.04% id in 408 aa, and to Chlorobium tepidum hypothetical protein ct0441 SWALL:AAM71686 (EMBL:AE012821) (317 aa) fasta scores: E(): 2.3e-26, 37.3% id in 319 aa. Possible alternative translational start site. CDS is extended at the C-terminus in comparison to some similar proteins | genbank | 52213614 | CAH39668.1 | 474 | 2949554 | 2950978 | |
| 150444 | hypothetical | BPSS2184 | putative membrane protein Similar to Chlorobium tepidum hypothetical protein ct0440 SWALL:AAM71685 (EMBL:AE012821) (406 aa) fasta scores: E(): 9.8e-35, 36.72% id in 403 aa, and to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 1.9e-34, 36.22% id in 403 aa. Possible alternative translational start site after codon 11 | genbank | 52213615 | CAH39669.1 | 413 | 2950975 | 2952216 | |
| 150445 | hypothetical | BPSS2185 | putative pilus subunit protein Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 9.7e-08, 54% id in 50 aa, and to Ralstonia solanacearum putative pilin protein rsp1092 or rs02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 7.6e-06, 53.33% id in 45 aa. Note: Also similar to BPSS2186 (73 aa) fasta scores: E(): 3.3e-10, 70.213% identity in 47 aa overlap | genbank | 52213616 | CAH39670.1 | 56 | 2953340 | 2953510 | |
| 150446 | hypothetical | BPSS2186 | putative pilus subunit protein Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 5.1e-05, 51.06% id in 47 aa. Note: Also similar to BPSS2185 (57 aa) fasta scores: E(): 4.7e-09, 70.213% identity in 47 aa overlap. CDS is extended at the N-terminus in comparison to orthologues | genbank | 52213617 | CAH39671.1 | 72 | 2953617 | 2953835 | |
| 150447 | hypothetical | BPSS2187 | putative pilus assembly-related outer membrane protein Similar to Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA1 or rsc0657 or rs01561 SWALL:Q8Y1N3 (EMBL:AL646060) (172 aa) fasta scores: E(): 1.2e-20, 48.21% id in 168 aa, and to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 0.004, 35.5% id in 138 aa | genbank | 52213618 | CAH39672.1 | 179 | 2953927 | 2954466 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150448 | hypothetical | BPSS2188 | conserved hypothetical protein Similar to Methanopyrus kandleri predicted AAA+ class ATPase with chaperone activity mk0708 SWALL:Q8TXG6 (EMBL:AE010363) (585 aa) fasta scores: E(): 3.4e-25, 33.03% id in 333 aa, and to Methanobacterium thermoautotrophicum conserved protein mth616 SWALL:O26713 (EMBL:AE000843) (442 aa) fasta scores: E(): 6.9e-22, 28.5% id in 407 aa | genbank | 52213619 | CAH39673.1 | 460 | 2954506 | 2955888 | |
| 150449 | hypothetical | BPSS2189 | putative pilus assembly-related, exported protein Similar to Ralstonia solanacearum probable pilus assembly transmembrane protein CpaB or rsc0656 or rs01560 SWALL:Q8Y1N4 (EMBL:AL646060) (288 aa) fasta scores: E(): 3.3e-33, 63.23% id in 291 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpC or atu0222 or agr_c_380 SWALL:Q8UIS0 (EMBL:AE008995) (268 aa) fasta scores: E(): 1.2e-09, 30.58% id in 255 aa | genbank | 52213620 | CAH39674.1 | 281 | 2955934 | 2956779 | |
| 150450 | hypothetical | BPSS2190 | putative outer membrane protein Similar to Ralstonia solanacearum probable outer membrane channel protein CpaC or rsc0655 or rs01559 SWALL:Q8Y1N5 (EMBL:AL646060) (634 aa) fasta scores: E(): 6.2e-45, 54.45% id in 617 aa, and to Caulobacter crescentus PilQ (pilus assembly protein CpaC) or cc2945 SWALL:Q9L717 (EMBL:AF229646) (560 aa) fasta scores: E(): 1.3e-10, 30.64% id in 558 aa | genbank | 52213621 | CAH39675.1 | 690 | 2956893 | 2958965 | |
| 150451 | hypothetical | BPSS2191 | putative lipoprotein Similar to Ralstonia solanacearum probable lipoprotein rsc0654 or rs01558 SWALL:Q8Y1N6 (EMBL:AL646060) (102 aa) fasta scores: E(): 4.3e-11, 46.59% id in 88 aa | genbank | 52213622 | CAH39676.1 | 101 | 2958987 | 2959292 | |
| 150452 | hypothetical | BPSS2192 | putative membrane protein No significant database matches | genbank | 52213623 | CAH39677.1 | 396 | 2959383 | 2960573 | |
| 150453 | hypothetical | BPSS2193 | putative membrane protein No significant database matches | genbank | 52213624 | CAH39678.1 | 180 | 2960597 | 2961139 | |
| 150454 | hypothetical | BPSS2194 | putative membrane protein No significant database matches | genbank | 52213625 | CAH39679.1 | 153 | 2961136 | 2961597 | |
| 150455 | hypothetical | BPSS2195 | putative pilus assembly-related protein Similar to Ralstonia solanacearum putative pilus assembly protein CpaE1 or rsc0653 or rs01557 SWALL:Q8Y1N7 (EMBL:AL646060) (397 aa) fasta scores: E(): 1.8e-49, 39.59% id in 394 aa, and to Caulobacter crescentus CpaE SWALL:Q9L715 (EMBL:AF229646) (517 aa) fasta scores: E(): 6.4e-14, 29.53% id in 369 aa | genbank | 52213626 | CAH39680.1 | 402 | 2961620 | 2962828 | |
| 150456 | hypothetical | BPSS2196 | putative type II/IV secretion system-related protein Similar to Chlorobium tepidum type II secretion system protein ct0434 SWALL:AAM71680 (EMBL:AE012821) (480 aa) fasta scores: E(): 1.1e-92, 60.33% id in 416 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 4e-73, 48.49% id in 431 aa | genbank | 52213627 | CAH39681.1 | 455 | 2962850 | 2964217 | |
| 150457 | hypothetical | BPSS2197 | putative membrane protein Similar to Ralstonia solanacearum putative tight adherence TadB-related transmembrane protein rsc0651 or rs01555 SWALL:Q8Y1N9 (EMBL:AL646060) (325 aa) fasta scores: E(): 6.1e-57, 46.34% id in 328 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpH or atu0217 or agr_c_372 SWALL:Q8UIS5 (EMBL:AE008995) (334 aa) fasta scores: E(): 1.9e-21, 28.35% id in 335 aa | genbank | 52213628 | CAH39682.1 | 325 | 2964244 | 2965221 | |
| 150458 | hypothetical | BPSS2198 | putative membrane protein Similar to Ralstonia solanacearum putative tight adherence TadC-related transmembrane protein rsc0650 or rs01554 SWALL:Q8Y1P0 (EMBL:AL646060) (315 aa) fasta scores: E(): 2.5e-53, 50.48% id in 311 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 4.2e-23, 31.56% id in 320 aa | genbank | 52213629 | CAH39683.1 | 319 | 2965276 | 2966235 | |
| 150459 | hypothetical | BPSS2199 | putative AsnC-family regulatory protein Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 3.2e-34, 56.12% id in 155 aa, and to Bacillus subtilis transcriptional regulator AzlB SWALL:AZLB_BACSU (SWALL:O07920) (157 aa) fasta scores: E(): 2.2e-15, 34.45% id in 148 aa. Note: Also similar to BPSL0849 (168 aa) fasta scores: E(): 3.2e-29, 52.500% identity in 160 aa overlap | genbank | 52213630 | CAH39684.1 | 158 | 2966659 | 2967135 | |
| 150460 | tyrB2 | hypothetical | BPSS2200 | aromatic-amino-acid aminotransferase Similar to Escherichia coli aromatic-amino-acid aminotransferase TyrB or b4054 SWALL:TYRB_ECOLI (SWALL:P04693) (397 aa) fasta scores: E(): 7.1e-92, 58.69% id in 397 aa, and to Pseudomonas putida aromatic-amino-acid aminotransferase TyrB-2 or pp3590 SWALL:AAN69190 (EMBL:AE016787) (398 aa) fasta scores: E(): 3.5e-91, 58.54% id in 398 aa. Note: Also similar to BPSS0808 TyrB1 (401 aa) fasta scores: E(): 1.1e-74, 55.556% identity in 396 aa overlap | genbank | 52213631 | CAH39685.1 | 405 | 2967370 | 2968587 |
| 150461 | hypothetical | BPSS2201 | conserved hypothetical protein Similar to Rhizobium meliloti putative translation initiation inhibitor protein rb0363 or smb20377 SWALL:Q92WH6 (EMBL:AL603643) (127 aa) fasta scores: E(): 1.1e-11, 40.32% id in 124 aa, to Xanthomonas axonopodis translation initiation inhibitor xac3392 SWALL:AAM38235 (EMBL:AE011985) (126 aa) fasta scores: E(): 4.9e-08, 36.03% id in 111 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri TdcF protein or b3113 or c3871 or sf3153 SWALL:TDCF_ECOLI (SWALL:P42631) (129 aa) fasta scores: E(): 7.8e-06, 33.91% id in 115 aa | genbank | 52213632 | CAH39686.1 | 130 | 2968811 | 2969203 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150462 | hypothetical | BPSS2202 | putative porin related, membrane protein Similar to Ralstonia solanacearum probable porin signal peptide protein rsc2108 or rs01496 SWALL:Q8XXK5 (EMBL:AL646068) (381 aa) fasta scores: E(): 2.3e-16, 31.94% id in 385 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.5e-11, 30.78% id in 393 aa | genbank | 52213633 | CAH39687.1 | 357 | 2969371 | 2970444 | |
| 150463 | hypothetical | BPSS2203 | putative amino acid transport, membrane protein Similar to Bacillus subtilis amino-acid permease RocC or ipa-78D SWALL:ROCC_BACSU (SWALL:P39636) (470 aa) fasta scores: E(): 2.4e-57, 37.3% id in 453 aa, and to Escherichia coli probable S-methylmethionine permease MmuP or b0260 SWALL:MMUP_ECOLI (SWALL:Q47689) (467 aa) fasta scores: E(): 8.4e-57, 37.69% id in 451 aa | genbank | 52213634 | CAH39688.1 | 476 | 2970524 | 2971954 | |
| 150464 | hypothetical | BPSS2204 | putative GntR-family regulatory protein Similar to Rhizobium meliloti putative transcriptional regulator, GntR family protein rb1031 or smb21591 SWALL:Q92UR2 (EMBL:AL603645) (244 aa) fasta scores: E(): 5.6e-15, 34.66% id in 225 aa, and to Escherichia coli galactonate operon transcriptional repressor DgoR or b3694/b3695 SWALL:DGOR_ECOLI (SWALL:P31460) (229 aa) fasta scores: E(): 2.2e-07, 25.11% id in 219 aa. Note: This CDS is longer in its N-terminal region than most of its database matches | genbank | 52213635 | CAH39689.1 | 255 | 2972031 | 2972798 | |
| 150465 | hypothetical | BPSS2205 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.5e-114, 60.8% id in 495 aa, and to Brucella melitensis hypothetical cytosolic protein bmeii0539 SWALL:Q8YCI9 (EMBL:AE009689) (489 aa) fasta scores: E(): 1.9e-34, 30.2% id in 500 aa | genbank | 52213636 | CAH39690.1 | 512 | 2973292 | 2974830 | |
| 150466 | hypothetical | BPSS2206 | putative transport related, membrane protein Similar to the plasmid-borne Agrobacterium vitis putative tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 3.9e-69, 43.63% id in 424 aa, and to Pseudomonas putida phthalate transporter Pht1 SWALL:PHT1_PSEPU (SWALL:Q05181) (451 aa) fasta scores: E(): 1.5e-62, 41.45% id in 427 aa | genbank | 52213637 | CAH39691.1 | 435 | 2974827 | 2976134 | |
| 150467 | hypothetical | BPSS2207 | putative LysR-family transcriptional regulator Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 4e-38, 37.17% id in 304 aa, and to Pseudomonas sp. putative transcriptional regulator ORF99 SWALL:Q936X4 (EMBL:U66917) (322 aa) fasta scores: E(): 4.8e-19, 34.25% id in 289 aa | genbank | 52213638 | CAH39692.1 | 304 | 2976263 | 2977177 | |
| 150468 | hypothetical | BPSS2208 | hypothetical protein No significant database matches | genbank | 52213639 | CAH39693.1 | 708 | 2977466 | 2979592 | |
| 150469 | hypothetical | BPSS2209 | hypothetical protein No significant database matches | genbank | 52213640 | CAH39694.1 | 125 | 2980527 | 2980904 | |
| 150470 | hypothetical | BPSS2210 | putative cation transport related protein Similar to Pseudomonas aeruginosa probable transporter pa2135 SWALL:Q9I1Y0 (EMBL:AE004641) (454 aa) fasta scores: E(): 1.6e-32, 39.95% id in 463 aa, and to Methanosarcina mazei Na(+)/H(+) antiporter mm1891 SWALL:AAM31587 (EMBL:AE013425) (437 aa) fasta scores: E(): 5.1e-05, 29.97% id in 447 aa, and to Escherichia coli putative Na(+)/H(+) exchanger YjcE or b4065 SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 0.00014, 29.67% id in 273 aa | genbank | 52213641 | CAH39695.1 | 439 | 2980951 | 2982270 | |
| 150471 | hypothetical | BPSS2211 | putative ATP-dependent DNA ligase Similar to Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 3.9e-54, 42.03% id in 1123 aa, and to Xanthomonas campestris ATP-dependent DNA ligase xcc0105 SWALL:Q8PE76 (EMBL:AE012104) (1001 aa) fasta scores: E(): 4.3e-34, 35.13% id in 1147 aa. Note: There are some fragments in this CDS that present no similarities to any of the database matches | genbank | 52213642 | CAH39696.1 | 1159 | 2982849 | 2986328 | |
| 150472 | hypothetical | BPSS2212 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa2150 SWALL:Q9I1W5 (EMBL:AE004642) (293 aa) fasta scores: E(): 1.6e-40, 48.67% id in 302 aa, and to Xanthomonas campestris hypothetical protein xcc0104 SWALL:AAM39423 (EMBL:AE012104) (313 aa) fasta scores: E(): 3.3e-29, 39.2% id in 278 aa. Note: This CDS is longer in its C-terminal region than most of its database matches | genbank | 52213643 | CAH39697.1 | 368 | 2986398 | 2987504 | |
| 150473 | hypothetical | BPSS2213 | putative membrane protein Similar to Rhizobium meliloti hypothetical membrane-anchored protein rb0938 or smb21362 SWALL:Q92UZ6 (EMBL:AL603645) (146 aa) fasta scores: E(): 1.4e-07, 30.07% id in 143 aa, and to Bacillus halodurans hypothetical protein bh1232 SWALL:Q9KDI1 (EMBL:AP001511) (218 aa) fasta scores: E(): 1.4e-07, 29.73% id in 148 aa | genbank | 52213644 | CAH39698.1 | 167 | 2987586 | 2988089 | |
| 150474 | katE | hypothetical | BPSS2214 | catalase HPII Similar to Escherichia coli catalase HPII KatE or b1732 SWALL:CATE_ECOLI (SWALL:P21179) (753 aa) fasta scores: E(): 8.2e-149, 56.9% id in 731 aa, and to Pseudomonas putida catalase HPII KatE or CatC SWALL:CATE_PSEPU (SWALL:P95539) (711 aa) fasta scores: E(): 1.6e-168, 62.95% id in 718 aa | genbank | 52213645 | CAH39699.1 | 708 | 2988112 | 2990238 |
| 150475 | hypothetical | BPSS2215 | hypothetical protein No significant database matches | genbank | 52213646 | CAH39700.1 | 143 | 2990374 | 2990805 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150476 | hypothetical | BPSS2216 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein RS02225 SWALL:Q8XPH4 (EMBL:AL646086) (72 aa) fasta scores: E(): 2.1e-11, 74.13% id in 58 aa, and to Bordetella pertussis putative membrane protein SWALL:Q7VXL6 (EMBL:BX640416) (53 aa) fasta scores: E(): 4.3e-10, 69.81% id in 53 aa. Possible alternative translational start site after codon 16 | genbank | 52213647 | CAH39701.1 | 69 | 2990840 | 2991049 | |
| 150477 | hypothetical | BPSS2217 | conserved hypothetical protein Similar to Rhizobium loti hypothetical protein msr0042 SWALL:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 5.3e-11, 68.85% id in 61 aa, and to Brucella melitensis hypothetical cytosolic protein bmei1136 SWALL:Q8YGM2 (EMBL:AE009553) (65 aa) fasta scores: E(): 2.7e-10, 68.33% id in 60 aa | genbank | 52213648 | CAH39702.1 | 62 | 2991046 | 2991234 | |
| 150478 | rpoN | hypothetical | BPSS2218 | RNA polymerase sigma-54 factor Similar to Alcaligenes eutrophus RNA polymerase sigma-54 factor RpoN or NtrA or Hno SWALL:RP54_ALCEU (SWALL:P28615) (493 aa) fasta scores: E(): 2.6e-69, 44.91% id in 501 aa, and to Pseudomonas aeruginosa RNA polymerase sigma-54 factor RpoN or pa4462 SWALL:RP54_PSEAE (SWALL:P49988) (497 aa) fasta scores: E(): 1.2e-64, 41.66% id in 504 aa | genbank | 52213649 | CAH39703.1 | 491 | 2991302 | 2992777 |
| 150479 | hypothetical | BPSS2219 | putative lipoprotein No significant database matches | genbank | 52213650 | CAH39704.1 | 252 | 2993473 | 2994231 | |
| 150480 | hypothetical | BPSS2220 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa2185 SWALL:Q9I1T0 (EMBL:AE004645) (294 aa) fasta scores: E(): 3.2e-48, 56.31% id in 293 aa, and to Salmonella typhi hypothetical protein sty1320 SWALL:Q8Z7E1 (EMBL:AL627269) (292 aa) fasta scores: E(): 4e-46, 53.4% id in 294 aa. Note: This CDS seems to lack a fragment of approx 50 residues at residue 37 | genbank | 52213651 | CAH39705.1 | 247 | 2994290 | 2995033 | |
| 150481 | hypothetical | BPSS2221 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa2184 SWALL:Q9I1T1 (EMBL:AE004645) (169 aa) fasta scores: E(): 2.5e-34, 59.76% id in 169 aa, and to Escherichia coli protein YciE or b1257 SWALL:YCIE_ECOLI (SWALL:P21363) (168 aa) fasta scores: E(): 4.7e-25, 49.39% id in 164 aa | genbank | 52213652 | CAH39706.1 | 169 | 2995345 | 2995854 | |
| 150482 | hypothetical | BPSS2222 | hypothetical protein C-terminal region is similar to Ralstonia solanacearum hypothetical protein ssp0486 or rs00364 SWALL:Q8XSI8 (EMBL:AL646078) (148 aa) fasta scores: E(): 7.6e-11, 42.3% id in 130 aa | genbank | 52213653 | CAH39707.1 | 225 | 2996319 | 2996996 | |
| 150483 | hypothetical | BPSS2223 | putative exported protein Similar to Agrobacterium tumefaciens agr_c_1796 SWALL:Q8U5G0 (EMBL:AE008028) (286 aa) fasta scores: E(): 4.9e-20, 29.56% id in 274 aa, and to Rhizobium loti hypothetical protein mlr1332 SWALL:Q98KT3 (EMBL:AP002997) (289 aa) fasta scores: E(): 4.7e-18, 29.83% id in 238 aa | genbank | 52213654 | CAH39708.1 | 285 | 2997308 | 2998165 | |
| 150484 | hypothetical | BPSS2224 | putative lipoprotein No significant database matches | genbank | 52213655 | CAH39709.1 | 98 | 2998583 | 2998879 | |
| 150485 | hypothetical | BPSS2225 | hypothetical protein No significant database matches | genbank | 52213656 | CAH39710.1 | 118 | 2998916 | 2999272 | |
| 150486 | hypothetical | BPSS2226 | hypothetical protein No significant database matches | genbank | 52213657 | CAH39711.1 | 99 | 3001052 | 3001351 | |
| 150487 | hypothetical | BPSS2227 | hypothetical protein Similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsp1523 or rs04800 SWALL:Q8XPW3 (EMBL:AL646085) (91 aa) fasta scores: E(): 0.5, 37.87% id in 66 aa, and of Mycobacterium tuberculosis hypothetical protein mt3313 SWALL:Q8VJ47 (EMBL:AE007143) (150 aa) fasta scores: E(): 3.2, 29.41% id in 68 aa. Similar to Rhizobium loti hypothetical protein Msl3106 msl3106 SWALL:Q98GZ3 (EMBL:AP003001) (86 aa) fasta scores: E(): 3.4, 32.85% id in 70 aa. Possible gene remanat | genbank | 52213658 | CAH39712.1 | 82 | 3001644 | 3001892 | |
| 150488 | hypothetical | BPSS2227A | hypothetical protein N-terminus is weakly similar to the C-terminal region of Rhizobium loti hypothetical protein msl3425 SWALL:Q98GA0 (EMBL:AP003002) (51 aa) fasta scores: E(): 0.37, 36.95% id in 46 aa | genbank | 52213659 | CAH39713.1 | 59 | 3002044 | 3002223 | |
| 150489 | hypothetical | BPSS2228 | hypothetical protein No significant database matches | genbank | 52213660 | CAH39714.1 | 214 | 3002627 | 3003271 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150490 | hypothetical | BPSS2229 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa2159 SWALL:Q9I1V6 (EMBL:AE004642) (138 aa) fasta scores: E(): 1.5e-21, 50.36% id in 137 aa, and to Bacillus halodurans hypothetical protein bh2605 SWALL:Q9K9P0 (EMBL:AP001516) (142 aa) fasta scores: E(): 1.2e-14, 37.85% id in 140 aa | genbank | 52213661 | CAH39715.1 | 143 | 3003879 | 3004310 | |
| 150491 | hypothetical | BPSS2230 | conserved hypothetical protein Similar to Methanosarcina mazei hypothetical protein mm1793 SWALL:AAM31489 (EMBL:AE013416) (135 aa) fasta scores: E(): 1.3e-21, 49.6% id in 125 aa, and to Agrobacterium tumefaciens agr_c_723 SWALL:Q8U5M3 (EMBL:AE007978) (142 aa) fasta scores: E(): 1.3e-12, 40.17% id in 117 aa | genbank | 52213662 | CAH39716.1 | 163 | 3004456 | 3004947 | |
| 150492 | hypothetical | BPSS2231 | putative response regulator Partially similar to Brucella suis polar differentiation response regulator DivK or bra0612 SWALL:AAN33801 (EMBL:AE014558) (123 aa) fasta scores: E(): 1.8e-07, 27.58% id in 116 aa, and to Streptomyces coelicolor putative regulatory protein sco5351 or scbac5h2.20 SWALL:Q9ADB7 (EMBL:AL939123) (167 aa) fasta scores: E(): 3.7e-07, 36.36% id in 110 aa | genbank | 52213663 | CAH39717.1 | 149 | 3005164 | 3005613 | |
| 150493 | hypothetical | BPSS2232 | putative exported protein No significant database matches | genbank | 52213664 | CAH39718.1 | 118 | 3005722 | 3006078 | |
| 150494 | hypothetical | BPSS2233 | putative DNA glycosylase Similar to Rhizobium loti hypothetical protein mll5147 SWALL:Q98CH6 (EMBL:AP003005) (223 aa) fasta scores: E(): 1.1e-28, 47.34% id in 188 aa, and to Zymomonas mobilis hypothetical protein SWALL:Q9RNL0 (EMBL:AF180145) (206 aa) fasta scores: E(): 6e-28, 43.14% id in 197 aa | genbank | 52213665 | CAH39719.1 | 218 | 3006090 | 3006746 | |
| 150495 | hypothetical | BPSS2234 | putative transport related, membrane protein Similar to Bradyrhizobium japonicum Blr6117 protein SWALL:BAC51382 (EMBL:AP005957) (450 aa) fasta scores: E(): 4.1e-64, 47.4% id in 405 aa, and to Ralstonia solanacearum probable manganese transport protein MntH or rsp0520 or rs00399 SWALL:MNTH_RALSO (SWALL:Q8XSF6) (442 aa) fasta scores: E(): 1.1e-11, 27.19% id in 445 aa | genbank | 52213666 | CAH39720.1 | 484 | 3006825 | 3008279 | |
| 150496 | hypothetical | BPSS2235 | putative Zinc-binding dehydrogenase Similar to Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase Fdh SWALL:FADH_METMR (SWALL:P47734) (424 aa) fasta scores: E(): 1.8e-78, 53.07% id in 390 aa, and to Pseudomonas putida glutathione-independent formaldehyde dehydrogenase FdhA SWALL:FADH_PSEPU (SWALL:P46154) (398 aa) fasta scores: E(): 4.7e-20, 32.5% id in 403 aa | genbank | 52213667 | CAH39721.1 | 391 | 3008389 | 3009564 | |
| 150497 | hypothetical | BPSS2236 | hypothetical protein No significant database matches | genbank | 52213668 | CAH39722.1 | 213 | 3010008 | 3010649 | |
| 150498 | hypothetical | BPSS2237 | putative exported protein Similar to Pseudomonas aeruginosa hypothetical protein pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 3.5e-13, 44% id in 150 aa | genbank | 52213669 | CAH39723.1 | 201 | 3010737 | 3011342 | |
| 150499 | hypothetical | BPSS2238 | putative short-chain dehydrogenase Similar to Anabaena sp. oxidoreductase alr5182 SWALL:Q8YLW4 (EMBL:AP003599) (285 aa) fasta scores: E(): 3.4e-62, 60.28% id in 277 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2142 SWALL:Q9I1X3 (EMBL:AE004641) (286 aa) fasta scores: E(): 3.5e-58, 57.34% id in 286 aa | genbank | 52213670 | CAH39724.1 | 285 | 3011380 | 3012237 | |
| 150500 | hypothetical | BPSS2239 | putative membrane protein No significant database matches | genbank | 52213671 | CAH39725.1 | 188 | 3012448 | 3013014 | |
| 150501 | hypothetical | BPSS2240 | hypothetical protein C-terminal region similar to Anabaena sp. hypothetical protein Asl3383 asl3383 SWALL:Q8YRR0 (EMBL:AP003592) (65 aa) fasta scores: E(): 2.8e-06, 46.66% id in 60 aa, and to Methanosarcina mazei hypothetical protein mm0228 SWALL:AAM29924 (EMBL:AE013247) (62 aa) fasta scores: E(): 4.5e-05, 44.06% id in 59 aa | genbank | 52213672 | CAH39726.1 | 103 | 3013274 | 3013585 | |
| 150502 | hypothetical | BPSS2241 | putative membrane protein No significant database matches | genbank | 52213673 | CAH39727.1 | 69 | 3013740 | 3013949 | |
| 150503 | hypothetical | BPSS2242 | putative oxidoreductase Similar to Xanthomonas campestris glucose 1-dehydrogenase homolog YxnA or xcc1992 SWALL:AAM41281 (EMBL:AE012304) (292 aa) fasta scores: E(): 6.3e-44, 51.15% id in 260 aa, and to Actinosynnema pretiosum glucose 1-dehydrogenase asm27 SWALL:AAM54105 (EMBL:AF453501) (341 aa) fasta scores: E(): 1e-33, 43.51% id in 262 aa, and to Bacillus subtilis hypothetical oxidoreductase YqjQ SWALL:YQJQ_BACSU (SWALL:P54554) (259 aa) fasta scores: E(): 4.7e-16, 31.43% id in 264 aa | genbank | 52213674 | CAH39728.1 | 271 | 3013956 | 3014771 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150504 | hypothetical | BPSS2243 | putative lipoprotein No significant database matches | genbank | 52213675 | CAH39729.1 | 163 | 3014799 | 3015290 | |
| 150505 | hypothetical | BPSS2244 | putative transferase Similar to Nostoc punctiforme putative sucrose-phosphate synthase SpsA SWALL:Q937E5 (EMBL:AJ316587) (423 aa) fasta scores: E(): 1.1e-44, 36.34% id in 421 aa, and to Mycobacterium tuberculosis hypothetical protein rv0486 or mt0504 or mtcy20g9.12 SWALL:Y486_MYCTU (SWALL:Q11152) (480 aa) fasta scores: E(): 8.9e-24, 36.23% id in 425 aa | genbank | 52213676 | CAH39730.1 | 462 | 3015521 | 3016909 | |
| 150506 | hypothetical | BPSS2245 | putative epimerase Similar to Pseudomonas aeruginosa similar to NAD dependent epimerase/dehydratase family SWALL:AAM27842 (EMBL:AF498418) (318 aa) fasta scores: E(): 1.4e-87, 69.5% id in 305 aa, and to Synechocystis sp. dTDP-glucose 4-6-dehydratase RfbB or slr0809 SWALL:P74036 (EMBL:D90911) (328 aa) fasta scores: E(): 1.6e-73, 61.09% id in 311 aa | genbank | 52213677 | CAH39731.1 | 348 | 3016906 | 3017952 | |
| 150507 | hypothetical | BPSS2246 | putative sensor kinase/response regulator fusion protein Similar to Anabaena sp. two-component hybrid sensor and regulator alr3442 SWALL:Q8YRK4 (EMBL:AP003593) (865 aa) fasta scores: E(): 1.3e-49, 30.58% id in 680 aa, and to Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 1e-42, 32.65% id in 640 aa | genbank | 52213678 | CAH39732.1 | 771 | 3018081 | 3020396 | |
| 150508 | hypothetical | BPSS2247 | hypothetical protein No significant database matches | genbank | 52213679 | CAH39733.1 | 230 | 3020531 | 3021223 | |
| 150509 | hypothetical | BPSS2248 | putative transferase Similar to Streptomyces coelicolor putative transferase sco6190 or sc2g5.11 SWALL:Q9Z5B2 (EMBL:AL939126) (298 aa) fasta scores: E(): 9.1e-54, 51.56% id in 287 aa, and to Clostridium acetobutylicum predicted glycosyltransferase cac2171 SWALL:Q97H42 (EMBL:AE007717) (299 aa) fasta scores: E(): 8.4e-09, 24.26% id in 239 aa | genbank | 52213680 | CAH39734.1 | 302 | 3021241 | 3022149 | |
| 150510 | hypothetical | BPSS2249 | putative sigma-54 interacting response regulator Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 2.6e-102, 62.63% id in 455 aa, and to Escherichia coli acetoacetate metabolism regulatory protein AtoC or Az or b2220 SWALL:ATOC_ECOLI (SWALL:Q06065) (461 aa) fasta scores: E(): 7.5e-55, 39.52% id in 458 aa. Note: Also similar in its C-terminal region to the upstream CDS BPSS2250 (323 aa) fasta scores: E(): 7.7e-44, 47.352% identity in 321 aa overlap | genbank | 52213681 | CAH39735.1 | 456 | 3022173 | 3023543 | |
| 150511 | hypothetical | BPSS2250 | putative sigma-54 interacting transcriptional regulator Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1668 or rs02227 SWALL:Q8XPH2 (EMBL:AL646086) (384 aa) fasta scores: E(): 2.7e-56, 52.59% id in 308 aa, and to Zymomonas mobilis nitrogen assimilation regulatory protein ntrC SWALL:Q9RNP2 (EMBL:AF179611) (372 aa) fasta scores: E(): 8.3e-41, 52.08% id in 240 aa. Note: Also similar to the C-terminal region of BPSS2249 (468 aa) fasta scores: E(): 1e-48, 47.664% identity in 321 aa overlap | genbank | 52213682 | CAH39736.1 | 322 | 3023932 | 3024900 | |
| 150512 | hypothetical | BPSS2251 | putative LPS biosynthesis related transferase Similar to Streptomyces coelicolor putative transferase sco6184 or sc2g5.05 SWALL:Q9Z5B8 (EMBL:AL939126) (316 aa) fasta scores: E(): 5.4e-22, 39.81% id in 324 aa, and low similarity to Halobacterium sp. LPS glycosyltransferase Lpg or vng0060G SWALL:Q9HSV4 (EMBL:AE004975) (333 aa) fasta scores: E(): 1.7e-06, 24.19% id in 248 aa | genbank | 52213683 | CAH39737.1 | 316 | 3025134 | 3026084 | |
| 150513 | hypothetical | BPSS2252 | putative LPS biosynthesis related glycosyltransferase Similar to Rhizobium loti ADP-heptose-LPS heptosyltransferase mlr2566 SWALL:Q98I51 (EMBL:AP003000) (335 aa) fasta scores: E(): 4e-13, 28.53% id in 347 aa, and to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or WaaF or b3620 SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 3.1e-08, 27.21% id in 305 aa. Note: This CDS is longer in its N-terminal region than most of its database matches | genbank | 52213684 | CAH39738.1 | 371 | 3026074 | 3027189 | |
| 150514 | hypothetical | BPSS2253 | putative glycosyltransferase Similar to Streptomyces coelicolor putative transferase sco6181 or sc2g5.02 SWALL:Q9Z5C1 (EMBL:AL939126) (344 aa) fasta scores: E(): 2e-31, 40.41% id in 334 aa, and to Methanosarcina mazei glycosyltransferase mm2102 SWALL:AAM31798 (EMBL:AE013451) (327 aa) fasta scores: E(): 1.1e-10, 26.84% id in 231 aa | genbank | 52213685 | CAH39739.1 | 333 | 3027186 | 3028187 | |
| 150515 | hypothetical | BPSS2254 | putative carbamoyltransferase Similar to Rhizobium sp. nodulation protein NolO or y4hD SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 3.9e-56, 39.72% id in 584 aa, and to Methanopyrus kandleri predicted carbamoyl transferase, NodU family mk0097 SWALL:Q8TZ42 (EMBL:AE010309) (515 aa) fasta scores: E(): 1.8e-44, 33.08% id in 526 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches | genbank | 52213686 | CAH39740.1 | 584 | 3028184 | 3029938 | |
| 150516 | hypothetical | BPSS2255 | glycosyltransferase family 9 protein Poor database matches. C-terminal region is weakly similar to Streptomyces coelicolor putative transferase SCO6183 or SC2G5.04 SWALL:Q9Z5B9 (EMBL:AL939126) (335 aa) fasta scores: E(): 3.2e-10, 29.08% id in 471 aa | genbank | 52213687 | CAH39741.1 | 619 | 3029942 | 3031801 | |
| 150517 | hypothetical | BPSS2256 | putative haloacid dehalogenase-like hydrolase Similar to Yersinia pestis hypothetical protein ypo1074 SWALL:Q8ZH37 (EMBL:AJ414146) (188 aa) fasta scores: E(): 4.2e-15, 32.75% id in 174 aa, and to Escherichia coli and Shigella flexneri hypothetical protein YaeD SWALL:YAED_ECOLI (SWALL:P31546) (191 aa) fasta scores: E(): 1.2e-14, 35.03% id in 157 aa. CDS is extended at the C-terminus in comparison to some orthologues | genbank | 52213688 | CAH39742.1 | 211 | 3031798 | 3032433 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150518 | hypothetical | BPSS2257 | putative short chain dehydrogenase Similar to Methanosarcina acetivorans 3-oxoacyl-[acyl-carrier protein] reductase ma2686 SWALL:Q8TMH4 (EMBL:AE010965) (239 aa) fasta scores: E(): 7.2e-19, 33.61% id in 238 aa. N-terminus is similar to the N-terminal region of to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 8.3e-16, 34.46% id in 206 aa | genbank | 52213689 | CAH39743.1 | 251 | 3032424 | 3033179 |