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Submitted SNP(ss) Details: ss918135           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-232038
RefSNP(rs#)rs160657
Submitted Batch IDOVLP-000804-1
Submitted DateSep 01, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 1 2000 12:00:00:000AM
Resource Links
GenBank AccessionAC024641.2
AC068533.5
Submitted Gene NameN.D
Submitted Gene IDN.D.
Submitted SNP SynonymsN.D
Submitted linkoutN.D
Submission reportview
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
SNP Classsingle base
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC024641 SequenceAccession1:AC024641 SequenceVersion1:2 SequenceContigName1:Contig19 SequenceContigPosition1:3032 SequenceLocalName2:AC068533 SequenceAccession2:AC068533 SequenceVersion2:5 SequenceContigName2:Contig10 SequenceContigPosition2:4276 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss918135|allelePos=329|len=493|taxid=9606|alleles='A/G'|mol=Genomic
 TCAGATCATT CTAACTGGGC AGACAAGGAG GCTGAGACCT TCCCAGAGTC ACCACCCTGG
 GAGTGAGCAT GGGAACATGG CTGAACACCA AAAGTTTGGG ttcttttttt ttttttttga
 gacagagtct cactttgtcg gccaggctgg agtacagtgg tgccatctca gctcactgca
 aactctgcct cccaggttca agagattctc ctgcctcaga ctcccaagta gctgggatta
 caggcacgtg ccaccacacc cagctaattt ttgtatcatt agtagagatg gggtttcacc
 atgttggcca ggctggtctt gaactcct
 R
 acctcaggtg atcctcccat cttggcctct gaaagtgcta ggattacagg catgagccac
 tgtgtgtggc cTTGAAGTTG GGGTTCTTTC CCACCACATG GCACCCCTCC AAGGAGATGA
 TGGCAGGGCC TGAGACACCC CTGGGACCAC AGCAGAACTT CTGG

  Submitted Frequency for ss918135 back to top
There is no frequency submission for ss918135.

  dbSNP summary of Genotypes for ss918135 back to top
No sufficient data to compute Hardy-weinberg probability for ss918135.

  Submitted individual genotype for ss918135 back to top
There is no individual genotype data for ss918135.

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Revised: May 25, 2006 1:38 PM .