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Join Evaluation Legend
- Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <100 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
- Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.1%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
- Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.1%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
- Certificate submitted, not yet approved.
- Certificate submitted and approved.
- Valid, contained clone
- Join not evaluated due to one accession not being finished.
Curator Links
Alignment for AC158549.8 and AC125150.3
Download Genome Workbench
AC158549.8 Mus musculus chromosome 19, clone RP24-216K4, complete sequence [htgs_phase3]
Length: 195,500 bp
AC125150.3 Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence [htgs_phase3]
Length: 154,390 bp
Alignment Summary
Join evaluation: Alignment count: 1
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Alignment 1 of 1
Mismatches = 0, Gaps = 0, Length = 9742 Percent identity = 100% Score = 1.931e+04 bits (9742), Expect = 0 0 BAC and 2 Fosmid bridging clones. 0 BAC and 2 Fosmid concordant clones. 0 BAC and 0 Fosmid discordant clones. AC158549.8 >185759 gatctgagtctgtggttagatctggttttgtttatgctgtggttttccttctttggtgat 185818 AC125150.3 >1 ............................................................ 60 AC158549.8 >185819 gcagagctccctttctgaaggtccagcagccgggtatcctattccattgcaggctgttgc 185878 AC125150.3 >61 ............................................................ 120 AC158549.8 >185879 ccactcggtctttgggccttcaaacattgaagttccctagtctcctccatactctggtac 185938 AC125150.3 >121 ............................................................ 180 AC158549.8 >185939 tgttttgtttctttccgtgatgcccaggtctttgtgttttctgacaaggtgcattggagg 185998 AC125150.3 >181 ............................................................ 240 AC158549.8 >185999 acgttggaagagtgacagttgagagcaagattgtgacagacagaaatgccctgatcccca 186058 AC125150.3 >241 ............................................................ 300 AC158549.8 >186059 aagtgctgactttgaatgtgggtgatgagttctgtggcgtggttgcccacatccagacac 186118 AC125150.3 >301 ............................................................ 360 AC158549.8 >186119 cagaggacttcttttgtcagcagctgcagagcggccgtgagtccattttcttagtttgtt 186178 AC125150.3 >361 ............................................................ 420 AC158549.8 >186179 gtgttgcgagaaagtgttccatgagactcagcatgccccctgaagaaaggacatttctgt 186238 AC125150.3 >421 ............................................................ 480 AC158549.8 >186239 gtctgaggtgtgcttttcgtccacagacaagcttgcggagcttcaggaatccctcagtga 186298 AC125150.3 >481 ............................................................ 540 AC158549.8 >186299 atactgtggccatgtgattccacgctctgacttttatccaaccattggggacgtgtgctg 186358 AC125150.3 >541 ............................................................ 600 AC158549.8 >186359 tgctcagttctcaggtgaggatggctttacatacaattgagtaaagccccaaatctttga 186418 AC125150.3 >601 ............................................................ 660 AC158549.8 >186419 ttcacaccgaatagccccacttggccttgagtgttaacatgcaccagtgatgccctaaac 186478 AC125150.3 >661 ............................................................ 720 AC158549.8 >186479 aagtccagtcaaactagatcaaagcagtgtggtgtatgcttcccacatcattagcctgca 186538 AC125150.3 >721 ............................................................ 780 AC158549.8 >186539 tgtacggtttctgttggtcccttactgttatacggaccctgacaggggtgtggtctctag 186598 AC125150.3 >781 ............................................................ 840 AC158549.8 >186599 aaccttgcactcccttctttgtgagctttatttgaggcccagtccagtcgtgactcacct 186658 AC125150.3 >841 ............................................................ 900 AC158549.8 >186659 ctgtcactctacaagttttactttgtagaaacctagttgtgttactgttgccttaaaggc 186718 AC125150.3 >901 ............................................................ 960 AC158549.8 >186719 agccctgctagctcactcaagagcccagcagctcagaacccaccagtaccttcactccta 186778 AC125150.3 >961 ............................................................ 1020 AC158549.8 >186779 taattacgtagcccactgttctagaactagccttactggtaccttagcaaataatcaatg 186838 AC125150.3 >1021 ............................................................ 1080 AC158549.8 >186839 taccgtggagattcgtgtggttagaacatgctttcacccctgctgagctacctactatct 186898 AC125150.3 >1081 ............................................................ 1140 AC158549.8 >186899 atctgttggaggaacaagtcatacttacatgatgtgctgtggcacggtgcttaatcttca 186958 AC125150.3 >1141 ............................................................ 1200 AC158549.8 >186959 ttgtcagcttgattagatctcacaccagggagtgacctctctgccccatggggccccaat 187018 AC125150.3 >1201 ............................................................ 1260 AC158549.8 >187019 ctgaccccatgagcaaaatcggtctttttttcctttgagttctttatcaggcatttggtt 187078 AC125150.3 >1261 ............................................................ 1320 AC158549.8 >187079 gttggggggggggcagaaagcaaagcagttactaagctaagcacagtggtcctgctttgg 187138 AC125150.3 >1321 ............................................................ 1380 AC158549.8 >187139 gaaggcgaggcttctggtagtctctagtgagcacgcatgctgagtacttggcattgtggc 187198 AC125150.3 >1381 ............................................................ 1440 AC158549.8 >187199 agaatgtccatatggccatctccagctggggagcacttctgcaggccatagagtctctga 187258 AC125150.3 >1441 ............................................................ 1500 AC158549.8 >187259 gacccctttctccttgttgcagaggatgatcagtggtaccgcgcctcggttctggcctac 187318 AC125150.3 >1501 ............................................................ 1560 AC158549.8 >187319 gcttctgaagaatctgtcctggttggatatgtcgattatgggaactttgagattctcagt 187378 AC125150.3 >1561 ............................................................ 1620 AC158549.8 >187379 ctgaaaagactttgtcccataattccaaagttgttggatttgccgatgcaagctctaaat 187438 AC125150.3 >1621 ............................................................ 1680 AC158549.8 >187439 tgtgtgctggcaggtatggaatgctgtggtcctctcattttcagatatcacgacatgaga 187498 AC125150.3 >1681 ............................................................ 1740 AC158549.8 >187499 atggacatgtgagcatgcgtgtggtgtaaacacctgcgtgttggagtagtgagagtcccg 187558 AC125150.3 >1741 ............................................................ 1800 AC158549.8 >187559 aggtcaaggcttggaggtcacagtgcaggtgccttatccatagcatcttgggcttcttcc 187618 AC125150.3 >1801 ............................................................ 1860 AC158549.8 >187619 tgcatcgataaatcatcttcagtgaggtctacagttgtaccattattgcaggatgtatct 187678 AC125150.3 >1861 ............................................................ 1920 AC158549.8 >187679 gatgtcagacagttcagagtgttgacactggtgttctgttaattatttgggctgcatgtg 187738 AC125150.3 >1921 ............................................................ 1980 AC158549.8 >187739 tattctttccaagatttccaagttgcattgcaagacagtactgcagagtgacctccatag 187798 AC125150.3 >1981 ............................................................ 2040 AC158549.8 >187799 ggtatgttccccgggtgatgaggtgccatgaatatgtgtcttgttatgtctgtgggacat 187858 AC125150.3 >2041 ............................................................ 2100 AC158549.8 >187859 actgtctcctcttttgtggaaggggttgagctcacttgtgcactccctcaggagagagta 187918 AC125150.3 >2101 ............................................................ 2160 AC158549.8 >187919 agtcctgttacacacttaaactcaagagacactgaagtagcactcgcctgtggactttcc 187978 AC125150.3 >2161 ............................................................ 2220 AC158549.8 >187979 cacatatcatccctgggagaatctgagctttgttcttttttggccggggggggggggggg 188038 AC125150.3 >2221 ............................................................ 2280 AC158549.8 >188039 gggcctaggctgcttcagctttagtttctatactgactttagtctatgcctttgaattat 188098 AC125150.3 >2281 ............................................................ 2340 AC158549.8 >188099 tggcaatattgatttgtatttaagaaaaacaaaagaaaaccccacaaaacttcgcattaa 188158 AC125150.3 >2341 ............................................................ 2400 AC158549.8 >188159 tatgtaaagccggtattccttcctggattgtttatacctttctgattaatcactttattg 188218 AC125150.3 >2401 ............................................................ 2460 AC158549.8 >188219 agctataatttaggcattgtaggagttcttgttttaggtacagaattcagtgttttttgt 188278 AC125150.3 >2461 ............................................................ 2520 AC158549.8 >188279 ttgtttatttttattctttcagtaaacttaagtaggttgtacatgctaaccagcatctgt 188338 AC125150.3 >2521 ............................................................ 2580 AC158549.8 >188339 ctggggacgacaccccgtcatacctcagagagctcgtgtatggttcacggctcagcctgt 188398 AC125150.3 >2581 ............................................................ 2640 AC158549.8 >188399 tccaggaaatggctaatctttctttctctatagatttggctttctggacattttctatca 188458 AC125150.3 >2641 ............................................................ 2700 AC158549.8 >188459 atggatttaaggtggttttgtttgtttgtttgtttgtttgtttgttttacattgaggtcc 188518 AC125150.3 >2701 ............................................................ 2760 AC158549.8 >188519 agaagtatttttaatttggctatttttcatgtttatacagtcttgctgctcagatgggac 188578 AC125150.3 >2761 ............................................................ 2820 AC158549.8 >188579 attttggttccagtgtttggcatagatttgtttctgaggaaacctttattgtttttgagg 188638 AC125150.3 >2821 ............................................................ 2880 AC158549.8 >188639 aaatgaagttaaatgtgtaatgcttgttttaggaattattttaacatccttttaacgact 188698 AC125150.3 >2881 ............................................................ 2940 AC158549.8 >188699 gtttgttaggcgtgaagccatcattaggaatttggactccagaagctgtgtgtgtcatga 188758 AC125150.3 >2941 ............................................................ 3000 AC158549.8 >188759 aagagatggtacagaacaggatggtcacagtgagagtggtgggcatgctggggaccaggg 188818 AC125150.3 >3001 ............................................................ 3060 AC158549.8 >188819 ccctggtggagctcatcgacaagtcggtggctcctcacgtcagcgcttctaaagctctca 188878 AC125150.3 >3061 ............................................................ 3120 AC158549.8 >188879 tagactcgggctttgccatcaaagaaaaggacgtggcagataaaggcagcagtatgcaca 188938 AC125150.3 >3121 ............................................................ 3180 AC158549.8 >188939 cagccagtggtaagtaggctgggcccaagagtgcatgcatgggccagacttcaggggagc 188998 AC125150.3 >3181 ............................................................ 3240 AC158549.8 >188999 tggtgtttgggtgcctctttaccttgctaactgaacagtcacataaatacacctaccatt 189058 AC125150.3 >3241 ............................................................ 3300 AC158549.8 >189059 atataaacatcggtgtgttgaaagtttgattagtcagaaatgtgtgacactcaaatgagc 189118 AC125150.3 >3301 ............................................................ 3360 AC158549.8 >189119 agcttaagtgcaatcctgaattttaggctcactttcctataaagacagcagaaagtcagt 189178 AC125150.3 >3361 ............................................................ 3420 AC158549.8 >189179 gggaattgagctgtcctaggtcctccacagccctgccagtgacagccctccctcacaaac 189238 AC125150.3 >3421 ............................................................ 3480 AC158549.8 >189239 tgtctcctcctgtgagaaacattgttattttcacagttcccttggccattgaaggtccag 189298 AC125150.3 >3481 ............................................................ 3540 AC158549.8 >189299 cagaggcgttggagtggacgtgggtggagttcactgttgacgagaccgtggatgtggtgg 189358 AC125150.3 >3541 ............................................................ 3600 AC158549.8 >189359 tctgcatgatgtacagtcccggggagttctactgccactttcttaaagatgatggtaagc 189418 AC125150.3 >3601 ............................................................ 3660 AC158549.8 >189419 tggctcgtgagttgttggttctggagcgtgtgttagttaccgtgtgacatgagctctttg 189478 AC125150.3 >3661 ............................................................ 3720 AC158549.8 >189479 caagcagccaggcacagagggatttgatggcacttagtttccattactgccttatggcca 189538 AC125150.3 >3721 ............................................................ 3780 AC158549.8 >189539 ttttaaatatcacggcatatcacctaacatcattgttggaaattaagtctgtctgttgat 189598 AC125150.3 >3781 ............................................................ 3840 AC158549.8 >189599 ctgatggactgttaaatttatagagaccaaatgctgtatcaagagtgcagtgtaggggtc 189658 AC125150.3 >3841 ............................................................ 3900 AC158549.8 >189659 actgggaggggacagtgagtaggatgtaaagtgaataagtgggggggaaaaaggagtgca 189718 AC125150.3 >3901 ............................................................ 3960 AC158549.8 >189719 gggtaatggttgtcacacaatggaggagtgcagggtaatggttgtcacagacacccccct 189778 AC125150.3 >3961 ............................................................ 4020 AC158549.8 >189779 gggagacagctcatcaggaagaaacaatgtttgctggctcccacatctggaaaaaacatg 189838 AC125150.3 >4021 ............................................................ 4080 AC158549.8 >189839 ttcgctggctcccagaatgctccggtgcctggccttacccatgcctcctccttcagaagg 189898 AC125150.3 >4081 ............................................................ 4140 AC158549.8 >189899 aagtggagtcctgctgcatttgattgttcctggttttgaaccgcatatgagacaaaacaa 189958 AC125150.3 >4141 ............................................................ 4200 AC158549.8 >189959 tacaatgtatacttttagctttgccttggttactacttcttaacattgctacaggtactt 190018 AC125150.3 >4201 ............................................................ 4260 AC158549.8 >190019 ggagcttgttttgttgttgttgcataatatcccattgtataagtgaacagcagtttttaa 190078 AC125150.3 >4261 ............................................................ 4320 AC158549.8 >190079 ttctgtttggtcttggggctcttggctacctttgcaaagatgctactgtgaacattgacc 190138 AC125150.3 >4321 ............................................................ 4380 AC158549.8 >190139 catcctagtgttcctgctgagtcatgtgtttctgctgagtcatcagtgctagcctaacct 190198 AC125150.3 >4381 ............................................................ 4440 AC158549.8 >190199 tttttctcaagtcatttaccataattctgacaactgtcactttgagatttctatttgtcc 190258 AC125150.3 >4441 ............................................................ 4500 AC158549.8 >190259 tactttctcacaatttatattttttgcactgtaaaagttgaataagcattatggaattta 190318 AC125150.3 >4501 ............................................................ 4560 AC158549.8 >190319 acttttctagatccatttttttctgccaaattaataccttagactagataagtaagtcct 190378 AC125150.3 >4561 ............................................................ 4620 AC158549.8 >190379 tgtctgactctcaagttctgagatgcatggtgtcttcacttagaatcacttaggagatgg 190438 AC125150.3 >4621 ............................................................ 4680 AC158549.8 >190439 actagtatgtcacgtagaacaaaactcaaggtgctggaggaatgcttggtggttaagata 190498 AC125150.3 >4681 ............................................................ 4740 AC158549.8 >190499 cttgctgctcctacagaggccctaggtttgggtctaagtatccacattgtaatcacaacc 190558 AC125150.3 >4741 ............................................................ 4800 AC158549.8 >190559 atctggaactccagttccagggcattggaatctgatgccctctcctacctgccgttggca 190618 AC125150.3 >4801 ............................................................ 4860 AC158549.8 >190619 ccaggcattcgcatggtgtatgcacatgcagcagaacactcattcacatacttaacaatg 190678 AC125150.3 >4861 ............................................................ 4920 AC158549.8 >190679 aatgaacctaaaaataatcacaacttaaaatgtccttttatttactttcataggtgactg 190738 AC125150.3 >4921 ............................................................ 4980 AC158549.8 >190739 ccaagcatatggtacaaaacttaacaataacagagtttagtggaaatcaagacaccctac 190798 AC125150.3 >4981 ............................................................ 5040 AC158549.8 >190799 ccctctcctcgtggtcctcagttcttttttttttcccagaggcagaagcagcctgatatg 190858 AC125150.3 >5041 ............................................................ 5100 AC158549.8 >190859 tgttccttctatgtacataactttcacactttttattcctttcttactatgcttttaatg 190918 AC125150.3 >5101 ............................................................ 5160 AC158549.8 >190919 tatacactttgtatttgcgtaggtggtgtggagagttctgcactcccctcaccgagcttc 190978 AC125150.3 >5161 ............................................................ 5220 AC158549.8 >190979 tgtgtggcaaacctgggagaccagcgctaggttgtgttagggtccagttgctgccctttt 191038 AC125150.3 >5221 ............................................................ 5280 AC158549.8 >191039 ccgttctaggatacagtgcaggataaccagcagtctcagtgctgttattttttgtagcta 191098 AC125150.3 >5281 ............................................................ 5340 AC158549.8 >191099 cattgttgccatctgtgtggttttatcttagtttaaaagaggtgatgatagaggttacag 191158 AC125150.3 >5341 ............................................................ 5400 AC158549.8 >191159 acctaatattctgagtttactctgatactgttcctttttaaaacttgtgtgggcatttgc 191218 AC125150.3 >5401 ............................................................ 5460 AC158549.8 >191219 ctgcatgctgtgcactacatacatgcagtgcctatgtggaccacaagatgggaccagatc 191278 AC125150.3 >5461 ............................................................ 5520 AC158549.8 >191279 cctggaacaggagttacagatggttgtgagcgctgggcactaggaactgacgtgggtcct 191338 AC125150.3 >5521 ............................................................ 5580 AC158549.8 >191339 cagtgggtcctaaccactgagccatgtcttcagccctgaaattgtaagacccccgaagct 191398 AC125150.3 >5581 ............................................................ 5640 AC158549.8 >191399 gggcctccactcaagtcccgggatgagctggccaacaccccaatgtcccgagagaaaacc 191458 AC125150.3 >5641 ............................................................ 5700 AC158549.8 >191459 acacctgatgcaaactgcaagaggttttattatcagctagctgaggatgaagtccctcca 191518 AC125150.3 >5701 ............................................................ 5760 AC158549.8 >191519 ccgtgcagggcaggggaatttgaccacgagcggtgacagtaggggtttttaacaggtagc 191578 AC125150.3 >5761 ............................................................ 5820 AC158549.8 >191579 tgaggaattgggaggagttgggaggagagttggctacagctcctttctggccgggggggc 191638 AC125150.3 >5821 ............................................................ 5880 AC158549.8 >191639 ggcgggggcgggggagtgagctgcagcctcctctccggggtctatctctatgtccttgta 191698 AC125150.3 >5881 ............................................................ 5940 AC158549.8 >191699 ggtcttcctacaattatcacatctctggctgtaaggcacagaaacaaaaaggctttttgc 191758 AC125150.3 >5941 ............................................................ 6000 AC158549.8 >191759 tggctatagagaacaaagagcttctttctggctgtatttttagagatcagggaagacaaa 191818 AC125150.3 >6001 ............................................................ 6060 AC158549.8 >191819 cttggggaacgtccaggggctttaccttccagggagaaacactcttaagttggggtctca 191878 AC125150.3 >6061 ............................................................ 6120 AC158549.8 >191879 cagaatcacatccttgggacaaactgtagtcacagtgatatgtcagtgggtgactgtgct 191938 AC125150.3 >6121 ............................................................ 6180 AC158549.8 >191939 ttggaaagtccaggcgtcccgtgtgaagctaaccagagactcccatgctcttgcatgctt 191998 AC125150.3 >6181 ............................................................ 6240 AC158549.8 >191999 gcgtcatccatttctctcagagcgcccttgctcatctgaaagtggaaggtgttccttcat 192058 AC125150.3 >6241 ............................................................ 6300 AC158549.8 >192059 tagaatgtctatttctatgacagcctttgccataattcagaggaggttgcttgcctctgg 192118 AC125150.3 >6301 ............................................................ 6360 AC158549.8 >192119 cttgtatagccacttgggtcccttttctgtagacgctgaagccatttgtgtctttgctgt 192178 AC125150.3 >6361 ............................................................ 6420 AC158549.8 >192179 ttgtcctcagtagcttgctgttcgtctctgcttcccactaggagattgctggctgcttgt 192238 AC125150.3 >6421 ............................................................ 6480 AC158549.8 >192239 ggttctgtacagtcttccattagagacagcctcaccttcctctcattgtattgtactgca 192298 AC125150.3 >6481 ............................................................ 6540 AC158549.8 >192299 gatttgcctacagaacttccatcagaacagtaactaaacttagcatttagtaattatatt 192358 AC125150.3 >6541 ............................................................ 6600 AC158549.8 >192359 tactttttagggcactattgacttcatgagtttgtatgaggttgacgctcaaaccttgtg 192418 AC125150.3 >6601 ............................................................ 6660 AC158549.8 >192419 gtggcatagagatggtactgccaagctatgttgtgcccaagaagtcactggttttcagtt 192478 AC125150.3 >6661 ............................................................ 6720 AC158549.8 >192479 tattaggaatttaaatgaatattgctgtattgccttaggaactttgtgaaggaaacagca 192538 AC125150.3 >6721 ............................................................ 6780 AC158549.8 >192539 tgtggtgtagttctcaggtgtttggggcgtacttgagattttcatggtgaaaatgtcctc 192598 AC125150.3 >6781 ............................................................ 6840 AC158549.8 >192599 tgacattagaaggcaagtgtggataatgtttatctttaacagtctacgttctctgtgttg 192658 AC125150.3 >6841 ............................................................ 6900 AC158549.8 >192659 tgttttcagccttagagaagctcgatgacttgaatcagtccttagcagactactgtgcac 192718 AC125150.3 >6901 ............................................................ 6960 AC158549.8 >192719 aaaagccgcccaatggctttaaggcagagatagggcggccttgctgtgcctttttttcag 192778 AC125150.3 >6961 ............................................................ 7020 AC158549.8 >192779 gtaagttcgacttggtgtcagtgactgtgtggatcttcttgtctctaacactcagacctt 192838 AC125150.3 >7021 ............................................................ 7080 AC158549.8 >192839 gttccagtgtatgtcttcttcccattttaagcatgttttcataatcaaaatgagaggaac 192898 AC125150.3 >7081 ............................................................ 7140 AC158549.8 >192899 ttttatgatgccttctccctaaggagccttgaagtgatgtctgaccttagtgctacatgt 192958 AC125150.3 >7141 ............................................................ 7200 AC158549.8 >192959 cccacaccacggaacatttctgatagctttgggctgttcgttccatggcaacacttttac 193018 AC125150.3 >7201 ............................................................ 7260 AC158549.8 >193019 cctttgtcattttaccaaataacagcgaagcctctggcccctgagcagtaagaatgtcat 193078 AC125150.3 >7261 ............................................................ 7320 AC158549.8 >193079 agtcatctcccacttccatgttgtttattgtgtagactatgaatggaattttttatcaga 193138 AC125150.3 >7321 ............................................................ 7380 AC158549.8 >193139 tgtcagggtgtgggactgtaagatgtctggggacacgttccaaaaatggaccttgggaat 193198 AC125150.3 >7381 ............................................................ 7440 AC158549.8 >193199 tctcagtatagggatttttgaagaaaaactaaaagttgtaatctatagaagagaaaaaat 193258 AC125150.3 >7441 ............................................................ 7500 AC158549.8 >193259 ttatcaactttgctatagaaagtgtttttttcctaagaggaaatattgaatgtgaaggaa 193318 AC125150.3 >7501 ............................................................ 7560 AC158549.8 >193319 aaagaaatgtcagagactctgaactgcttccaggtgacggcaactggtaccgggctctag 193378 AC125150.3 >7561 ............................................................ 7620 AC158549.8 >193379 tcaaggagatcttaccaagtgggaatgttaaagtccactttgtggattacggaaatgttg 193438 AC125150.3 >7621 ............................................................ 7680 AC158549.8 >193439 aagaagttaccacagaccaactccaggcgatattaccacagttcttactacttccatttc 193498 AC125150.3 >7681 ............................................................ 7740 AC158549.8 >193499 aggggatgcagtgctggctagtaggtaggtgtcaacaggcgtttctcacaccttggtgaa 193558 AC125150.3 >7741 ............................................................ 7800 AC158549.8 >193559 ccaacactgtatgggtgcccttcttcagttacttatgcacttgttgtaacttccaactga 193618 AC125150.3 >7801 ............................................................ 7860 AC158549.8 >193619 gctagaaaagcccacctcacgttacacaatgtaggaacatacttagtattttggccggaa 193678 AC125150.3 >7861 ............................................................ 7920 AC158549.8 >193679 tactcagggtgggctgaaggagtttcttttctgtagttctgggagtgaaactcacaggct 193738 AC125150.3 >7921 ............................................................ 7980 AC158549.8 >193739 gtctagaagagtttttgcaggactctgagaccctcagataatagtggattctggcattta 193798 AC125150.3 >7981 ............................................................ 8040 AC158549.8 >193799 tttctagtcgtttattctaaagcaacctggaaatggctgcaaggaactcatcccagggct 193858 AC125150.3 >8041 ............................................................ 8100 AC158549.8 >193859 gttactgacagtccatcacttgcagagcctgccacagaggacgactgtaacatgatctat 193918 AC125150.3 >8101 ............................................................ 8160 AC158549.8 >193919 gtcaggatggtgagtggccctcttaacagtggctctgaggcactgggccaggcctgggac 193978 AC125150.3 >8161 ............................................................ 8220 AC158549.8 >193979 tgaagctgtgcccaggcctttgctgtcaccctgctgctgctaagatgtgttacactcacc 194038 AC125150.3 >8221 ............................................................ 8280 AC158549.8 >194039 cctgtgatgcgagggaggaaagcgagttacaggatgtgcagggcagcatcactatgcagg 194098 AC125150.3 >8281 ............................................................ 8340 AC158549.8 >194099 gaggggtgccaggggccagccctgctacacactggctgctgggagagctagcaagttatt 194158 AC125150.3 >8341 ............................................................ 8400 AC158549.8 >194159 taagctgcgcacttctgttttcctatctggagaagaagagaagtaagaccacacagaagc 194218 AC125150.3 >8401 ............................................................ 8460 AC158549.8 >194219 agcagggctcggcagcttgtcagggatgtgacctgacacctcgcttttgagcatgcttgt 194278 AC125150.3 >8461 ............................................................ 8520 AC158549.8 >194279 tgctgccttgttctgctgaaacccggtctctgtggtcaggacctggaacctagtaactgt 194338 AC125150.3 >8521 ............................................................ 8580 AC158549.8 >194339 tcttaccttatcacctcttttgctgggattccacgaatgtgtccccatgcatgtaaacat 194398 AC125150.3 >8581 ............................................................ 8640 AC158549.8 >194399 ttaatagagtatatgtgtatatgtgcgcagagtatatgtgcgcagagtatatgtttccat 194458 AC125150.3 >8641 ............................................................ 8700 AC158549.8 >194459 ttgcattcatggtcatgggagcagcatggcgccgaggcctgggcagtagtgtcagctgct 194518 AC125150.3 >8701 ............................................................ 8760 AC158549.8 >194519 cagcactccacaggagaaccacttcagcccaggaacctgacaacttgggccatacaacaa 194578 AC125150.3 >8761 ............................................................ 8820 AC158549.8 >194579 gaccctcactttaagacccctacttctgtggaaagtgatcccagattcttaacagtgccc 194638 AC125150.3 >8821 ............................................................ 8880 AC158549.8 >194639 atgttggggagcacagatgttcctaagtcctgtttttgtctgtctgtctgtctttgtgac 194698 AC125150.3 >8881 ............................................................ 8940 AC158549.8 >194699 agttctgttgtgatgagacacatgacatcactctgtctcctaataatgtgcagtgggtgt 194758 AC125150.3 >8941 ............................................................ 9000 AC158549.8 >194759 gcatgaggcctctgttcttactaaagactatatcgtcgtgtgttcatacatgtatgtgta 194818 AC125150.3 >9001 ............................................................ 9060 AC158549.8 >194819 ctcacatgtgcacgtatgtatgatacattcatgcaggcacatgcatggcgtctgcagtaa 194878 AC125150.3 >9061 ............................................................ 9120 AC158549.8 >194879 ggacaagaagacaacttttgggaatcggttctctccttccactctgagaaccaaagatca 194938 AC125150.3 >9121 ............................................................ 9180 AC158549.8 >194939 aattcaaatgctcaggctttggtggcaaacacgttcacctgtagagccatcttaccccag 194998 AC125150.3 >9181 ............................................................ 9240 AC158549.8 >194999 attgttcttaatcaccatatgtcacgccagtgtgcttcttaagatgtggccctcagacca 195058 AC125150.3 >9241 ............................................................ 9300 AC158549.8 >195059 ggagcttcaaagttccagacaagcaggaacttgtcttaagagctcagatttataagtcag 195118 AC125150.3 >9301 ............................................................ 9360 AC158549.8 >195119 gtggtggcggcacactccttcaatcccagcactcggaaggcagaggcaggcagatctctg 195178 AC125150.3 >9361 ............................................................ 9420 AC158549.8 >195179 tatgagttccaggacagcctggagaaaccctgtctcaagaaaacaaaaacaaaattcaga 195238 AC125150.3 >9421 ............................................................ 9480 AC158549.8 >195239 tttatagtccccactccagacttaaatgagaagctctggagcgagcctccacatctgttg 195298 AC125150.3 >9481 ............................................................ 9540 AC158549.8 >195299 aacaggtgctgcgagtagtctcagatgcacagtcatggttggaaacccaccaaaaggaag 195358 AC125150.3 >9541 ............................................................ 9600 AC158549.8 >195359 gacggaaatgagaatccaggggtgccacccctgactcccacaggctcagctgctctctcc 195418 AC125150.3 >9601 ............................................................ 9660 AC158549.8 >195419 tgggcaagtgaggccctgcctgcctcagaatacaagggagtaagcccacgttgctcagag 195478 AC125150.3 >9661 ............................................................ 9720 AC158549.8 >195479 cactgggaactgtgcaaagatc 195500 AC125150.3 >9721 ...................... 9742
| Type | Point1 | Point2 | Orient1 | Orient2 | Curator | Comment | Time |
| A | 195500 | 9743 | + | + | chenhc | Taxid 10090 chrom 19 Reference assembly | 2008-11-24 16:49:19.250 |
| A | 195500 | 9743 | + | + | chenhc | Taxid 10090 chrom 19 Reference assembly | 2008-11-20 17:01:41.546 |
Events
| Id | Type | Date | Whodid | Comment |
| 32586 | ImportOldDb | 09/06/2005 10:34:00 | f_old_db | |
| 32587 | ReSetShortOvlp | 09/04/2008 10:31:48 | dbo |
BAC Ends
| Clone | R | F | ||||
|---|---|---|---|---|---|---|
| Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
| C3H-106M19 | AC158549.8 | 99.45% | pos 47333 (R-) | |||
| C3H-195D23 | AC158549.8 | 99.64% | pos 40936 (F-) | |||
| C3H-197H20 | AC158549.8 | 100% | pos 45019 (F-) | |||
| C3H-20B11 | AC158549.8 | 99.03% | pos 103666 (R-) | |||
| C3H-210N14 | AC158549.8 | 100% | pos 23346 (F-) | |||
| C3H-218H3 | AC158549.8 | 99.87% | pos 41642 (F-) | |||
| CH29-147H20 | AC158549.8 | 99.51% | pos 53772 (F-) | |||
| RP24-103F23 | AC125150.3 | 100% | pos 53306 (R+) | |||
| RP24-118C2 | AC158549.8 | 99.55% | pos 47448 (R-) | AC158549.8 | 100% | pos 11721 (F+) |
| RP24-155C19 | AC158549.8 | 100% | pos 106407 (R-) | |||
| RP24-232M2 | AC125150.3 | 100% | pos 36278 (R+) | |||
| RP24-291E9 | AC125150.3 | 99.29% | pos 36267 (R+) | |||
| RP24-354K9 | AC125150.3 | 99.66% | pos 154355 (F-) | |||
Fosmid Ends
| Clone | R | F | ||||
|---|---|---|---|---|---|---|
| Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
| WI1-1046O5 | AC158549.8 | 99.7% | pos 53275 (R+) | AC158549.8 | 99.39% | pos 95499 (F-) |
| WI1-104L7 | AC158549.8 | 100% | pos 10681 (F-) | |||
| WI1-1055G9 | AC158549.8 | 100% | pos 169494 (R-) | AC158549.8 | 100% | pos 131416 (F+) |
| WI1-1056N24 | AC125150.3 | 100% | pos 1831 (R+) | AC125150.3 | 99.8% | pos 1733 (F+) |
| AC158549.8 | 100% | pos 187589 (R+) | AC158549.8 | 99.8% | pos 187491 (F+) | |
| WI1-107I10 | AC158549.8 | 99.76% | pos 103311 (R-) | |||
| WI1-1093M21 | AC158549.8 | 100% | pos 159712 (F+) | |||
| WI1-1131C1 | AC158549.8 | 100% | pos 58891 (R+) | AC158549.8 | 99.52% | pos 97959 (F-) |
| WI1-1166F7 | AC125150.3 | 100% | pos 78092 (R-) | |||
| WI1-1200M20 | AC125150.3 | 99.61% | pos 126211 (R+) | |||
| WI1-1221H5 | AC125150.3 | 100% | pos 135747 (F+) | |||
| WI1-1270I5 | AC158549.8 | 99.78% | pos 133366 (R+) | |||
| WI1-1308C15 | AC158549.8 | 100% | pos 78163 (R-) | AC158549.8 | 100% | pos 38493 (F+) |
| WI1-1383G11 | AC125150.3 | 99.84% | pos 53990 (R-) | AC125150.3 | 100% | pos 17262 (F+) |
| WI1-1397N7 | AC158549.8 | 100% | pos 18911 (F-) | |||
| WI1-1519B22 | AC158549.8 | 100% | pos 152319 (R-) | AC158549.8 | 99.68% | pos 110139 (F+) |
| WI1-1580L20 | AC158549.8 | 100% | pos 11177 (R+) | AC158549.8 | 99.82% | pos 48370 (F-) |
| WI1-1682K17 | AC158549.8 | 100% | pos 159695 (R+) | |||
| WI1-1702B12 | AC125150.3 | 100% | pos 10832 (R-) | AC158549.8 | 100% | pos 158504 (F+) |
| WI1-1721C11 | AC158549.8 | 100% | pos 18855 (R+) | AC158549.8 | 99.25% | pos 61253 (F-) |
| WI1-1782L6 | AC125150.3 | 99.55% | pos 57178 (F+) | |||
| WI1-1796J24 | AC125150.3 | 99.83% | pos 92489 (R-) | AC125150.3 | 100% | pos 47580 (F+) |
| WI1-1810N11 | AC125150.3 | 99.8% | pos 49344 (R+) | AC125150.3 | 99.73% | pos 90474 (F-) |
| WI1-1810P11 | AC125150.3 | 99.83% | pos 49333 (R+) | AC125150.3 | 100% | pos 90454 (F-) |
| WI1-1828I8 | AC125150.3 | 100% | pos 131740 (R+) | |||
| WI1-1829O1 | AC158549.8 | 99.43% | pos 110539 (R+) | AC158549.8 | 99.07% | pos 151185 (F-) |
| WI1-1933A8 | AC158549.8 | 100% | pos 11126 (R+) | AC158549.8 | 99.38% | pos 50306 (F-) |
| WI1-196F22 | AC125150.3 | 100% | pos 38116 (R+) | AC125150.3 | 99.82% | pos 80107 (F-) |
| WI1-1987C15 | AC125150.3 | 99.84% | pos 53279 (R+) | AC125150.3 | 100% | pos 93374 (F-) |
| WI1-2077C22 | AC125150.3 | 100% | pos 36902 (R-) | |||
| WI1-2175N13 | AC158549.8 | 99.81% | pos 3150 (R-) | |||
| WI1-2176P20 | AC125150.3 | 99.34% | pos 53279 (R+) | AC125150.3 | 100% | pos 93361 (F-) |
| WI1-2185N18 | AC158549.8 | 100% | pos 15680 (F-) | |||
| WI1-2213G21 | AC125150.3 | 99.63% | pos 33472 (R+) | |||
| WI1-2268J24 | AC158549.8 | 99.44% | pos 70240 (R+) | AC158549.8 | 100% | pos 108232 (F-) |
| WI1-2270O8 | AC158549.8 | 99.76% | pos 163631 (R-) | AC158549.8 | 99.61% | pos 118833 (F+) |
| WI1-2271O15 | AC158549.8 | 100% | pos 114620 (R+) | AC158549.8 | 100% | pos 158150 (F-) |
| WI1-2280L12 | AC125150.3 | 100% | pos 60207 (R+) | |||
| WI1-2334H20 | AC125150.3 | 99.53% | pos 27235 (R+) | AC125150.3 | 100% | pos 71367 (F-) |
| WI1-2356P2 | AC158549.8 | 99.83% | pos 114619 (R+) | AC158549.8 | 100% | pos 158150 (F-) |
| WI1-2379N15 | AC158549.8 | 100% | pos 86117 (R+) | AC158549.8 | 100% | pos 130934 (F-) |
| WI1-2438N10 | AC158549.8 | 100% | pos 145738 (R-) | |||
| WI1-2461L18 | AC125150.3 | 99.77% | pos 80176 (R-) | AC125150.3 | 99.82% | pos 41216 (F+) |
| WI1-2477A12 | AC125150.3 | 100% | pos 135505 (R-) | |||
| WI1-2499G8 | AC158549.8 | 99.84% | pos 149415 (R-) | AC158549.8 | 100% | pos 111950 (F+) |
| WI1-2585D4 | AC158549.8 | 100% | pos 25318 (F-) | |||
| WI1-2623P2 | AC158549.8 | 99.28% | pos 97806 (R-) | |||
| WI1-2633H18 | AC125150.3 | 100% | pos 53425 (F+) | |||
| WI1-2711F2 | AC158549.8 | 99.18% | pos 95359 (R-) | AC158549.8 | 100% | pos 57329 (F+) |
| WI1-2719E12 | AC125150.3 | 100% | pos 54324 (R+) | AC125150.3 | 99% | pos 97443 (F-) |
| WI1-2728I13 | AC158549.8 | 99.82% | pos 92523 (R-) | AC158549.8 | 99.63% | pos 49860 (F+) |
| WI1-278L6 | AC158549.8 | 100% | pos 47203 (R-) | AC158549.8 | 99.8% | pos 4177 (F+) |
| WI1-2854O22 | AC125150.3 | 100% | pos 100884 (R+) | AC125150.3 | 100% | pos 138240 (F-) |
| WI1-2891D1 | AC158549.8 | 99.54% | pos 101496 (R-) | AC158549.8 | 99.69% | pos 62764 (F+) |
| WI1-30J18 | AC125150.3 | 100% | pos 148475 (F+) | |||
| WI1-345F16 | AC125150.3 | 100% | pos 26264 (R-) | AC158549.8 | 100% | pos 171058 (F+) |
| WI1-408G17 | AC125150.3 | 100% | pos 124776 (R+) | |||
| WI1-489B8 | AC158549.8 | 99.29% | pos 22186 (R+) | AC158549.8 | 99% | pos 60830 (F-) |
| WI1-535P19 | AC125150.3 | 99.75% | pos 39513 (R+) | AC125150.3 | 100% | pos 79273 (F-) |
| WI1-560O18 | AC158549.8 | 99.59% | pos 44397 (R+) | AC158549.8 | 99.53% | pos 85224 (F-) |
| WI1-564O3 | AC125150.3 | 100% | pos 112890 (R+) | |||
| WI1-575B9 | AC125150.3 | 100% | pos 136203 (R-) | AC125150.3 | 100% | pos 99529 (F+) |
| WI1-642E7 | AC158549.8 | 99.24% | pos 84565 (R+) | AC158549.8 | 99.15% | pos 121754 (F-) |
| WI1-659C5 | AC158549.8 | 100% | pos 104507 (R-) | AC158549.8 | 99.78% | pos 62988 (F+) |
| WI1-687B15 | AC125150.3 | 100% | pos 47431 (R+) | |||
| WI1-806E19 | AC158549.8 | 100% | pos 55770 (R-) | AC158549.8 | 99.83% | pos 14448 (F+) |
| WI1-809E7 | AC158549.8 | 100% | pos 16263 (F-) | |||
| WI1-897O15 | AC125150.3 | 99.37% | pos 65115 (R+) | AC125150.3 | 99.5% | pos 106246 (F-) |
| AC125150.3 | 99.78% | pos 65110 (R+) | AC125150.3 | 100% | pos 106247 (F-) | |
| WI1-915F11 | AC125150.3 | 100% | pos 67347 (R+) | AC125150.3 | 99.71% | pos 102362 (F-) |
| WI1-952N7 | AC158549.8 | 100% | pos 136423 (R+) | AC158549.8 | 99.26% | pos 174249 (F-) |
| WI1-960K10 | AC158549.8 | 99.33% | pos 94328 (R-) | AC158549.8 | 100% | pos 54170 (F+) |