proteins
6 BUDs| 105 proteins |
S | COG4636 | Uncharacterized protein conserved in cyanobacteria | Help | |
|---|---|---|---|---|---|
| 38 from | query genome Synechocystis (Chroococcales | Chroococcali) | ||||
| 6 BUDs | sll0007 sll0198 sll0296 sll0488 sll0740 sll0888 sll0913 sll0925 (sll0995 sll1461 slr1095 ) sll1072 (sll1186 slr1081 ) sll1222 sll1232 sll1250 sll1355 sll1609 sll1938 sll1956 (slr0300 slr0885 ) (slr0445 slr1315 ) (slr0976 slr1612 ) slr0981 slr1083 slr1290 slr1378 slr1613 slr1752 (slr2038 slr2084 ) slr2092 ssl2471 ssl3573 | ||||
191 letters (r) 0
0 918 = ||| 1 sll0007 (191) = 0
-1
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= sll0007
(191 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
sll0007 358 5e-99
sll1956 189 2e-48
all4142 182 6e-46
sll0296 178 7e-45
sll1232 177 1e-44
sll0913 176 3e-44
alr2988 172 3e-43
all2905 166 2e-41
alr1444 157 1e-38
sll1250 135 6e-32
sll1355 94 1e-19
sll0198 59 8e-09
slr0885 45 1e-04
slr0300 40 0.002
alr1224 39 0.008
alr0559 39 0.008
sll0488 38 0.012
all7113 38 0.017
slr0981 37 0.018
sll0740 37 0.027
aq_037 36 0.050
alr4854 36 0.064
BH0309 35 0.066
all2275 34 0.15
all4143 34 0.16
alr1074 34 0.17
slr2092 33 0.47
DR0469 32 0.56
all4364 32 0.77
sll1938 32 1.1
alr3200 31 1.7
alr3907 30 2.1
alr1923 30 3.8
aq_1194 30 4.3
alr5230 30 4.5
VNG0390G 29 7.4
# >sll0007
# Length = 191
#
# Score = 358 bits (918), Expect = 5e-99
# Identities = 191/191 (100%), Positives = 191/191 (100%)
#
# Query: 1 MVLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKP 60
# MVLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKP
# Sbjct: 1 MVLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKP 60
#
# Query: 61 DKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSV 120
# DKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSV
# Sbjct: 61 DKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSV 120
#
# Query: 121 TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSI 180
# TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSI
# Sbjct: 121 TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSI 180
#
# Query: 181 TAAEVFDWLKI 191
# TAAEVFDWLKI
# Sbjct: 181 TAAEVFDWLKI 191
#
#
# >sll1956
# Length = 192
#
# Score = 189 bits (481), Expect = 2e-48
# Identities = 98/190 (51%), Positives = 128/190 (66%), Gaps = 5/190 (2%)
#
# Query: 1 MVLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKP 60
# M+ A ++SLE FL LPETKPAQEY G + QKPMP+GKHS +Q LA+ IN + +
# Sbjct: 1 MIHAIETTSSISLEEFLNLPETKPAQEYQNGKIIQKPMPQGKHSKLQTTLASEINQRAES 60
#
# Query: 61 DKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSV 120
# ++AYA ELRCTFG+RS+VPDI V +W N+PLD+ G+I DR D PDW+IEILSPDQS
# Sbjct: 61 HQLAYAFTELRCTFGERSLVPDITVFKWNNIPLDSRGQIVDRIDIPPDWIIEILSPDQSP 120
#
# Query: 121 TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTAS-LPQVYLAETEIQESLTVFAELENWS 179
# V+EKI F+L+ G +L WLV P + VF + LP+ + ++ L V AEL+ W
# Sbjct: 121 LKVIEKISFALRNGCQLGWLVSPSENIVMVFQGNQLPETKMG----KDPLAVLAELQEWF 176
#
# Query: 180 ITAAEVFDWL 189
# IT +F WL
# Sbjct: 177 ITPEIIFGWL 186
#
#
# >all4142
# Length = 189
#
# Score = 182 bits (461), Expect = 6e-46
# Identities = 96/181 (53%), Positives = 119/181 (65%), Gaps = 5/181 (2%)
#
# Query: 12 SLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALPELR 71
# SL+ FL LPETKPA EY G + QKPMP+GKHS +Q L++ IN +P K A AL ELR
# Sbjct: 12 SLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEPQKKALALTELR 71
#
# Query: 72 CTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSL 131
# CTF RS+VPD+AV W +P D GEIA+RF+ PDW+IEILSPDQS V+ KIIF +
# Sbjct: 72 CTFEGRSLVPDVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSPNRVINKIIFCI 131
#
# Query: 132 KAGTELAWLVDPMAKSITVFTA-SLPQVYLAETEIQESLTVFAELENWSITAAEVFDWLK 190
# GT+L W +D KS+ VF LP+V + L V LENW I AA++F WLK
# Sbjct: 132 NQGTKLGWFIDANDKSVMVFQPDKLPEVKYD----NDILPVLDVLENWQIKAADIFSWLK 187
#
# Query: 191 I 191
# +
# Sbjct: 188 V 188
#
#
# >sll0296
# Length = 186
#
# Score = 178 bits (451), Expect = 7e-45
# Identities = 97/187 (51%), Positives = 126/187 (66%), Gaps = 2/187 (1%)
#
# Query: 3 LASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDK 62
# + + V TLSL F+ALPETKPAQEY G + +KPMPKGKHS +Q L+A +N P +
# Sbjct: 1 MVTTPVKTLSLAEFMALPETKPAQEYINGTIRKKPMPKGKHSLLQTLLSANLNRVFSPQR 60
#
# Query: 63 IAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTL 122
# A AL ELRCTFGDRSIVPDIAV +P D+ GEIAD FD APDW IEILSPDQS
# Sbjct: 61 RALALSELRCTFGDRSIVPDIAVFTQDRIPRDHSGEIADLFDLAPDWTIEILSPDQSPVR 120
#
# Query: 123 VMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSITA 182
# V++ I++ L+ GT++ WLVDP +++ V+ QV + + E E + V A E++ +T
# Sbjct: 121 VIKNILYCLEHGTQMGWLVDPKEQTLLVYRPD-KQVQIVD-EAPEVIPVPAFAEDFQVTV 178
#
# Query: 183 AEVFDWL 189
# E+F WL
# Sbjct: 179 GELFAWL 185
#
#
# >sll1232
# Length = 187
#
# Score = 177 bits (449), Expect = 1e-44
# Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
#
# Query: 9 PTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALP 68
# P++SL+ FL LPETKPAQEY G V QKPMP+GKHS IQ EL A IN+ +K KIA A P
# Sbjct: 7 PSISLKDFLDLPETKPAQEYVEGQVIQKPMPQGKHSVIQGELVAVINSSLKNRKIARAFP 66
#
# Query: 69 ELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKII 128
# ELRCTFG RSIVPD++V W N+P D+ G+IA+ F AP+W IEILSPDQS T V+ I+
# Sbjct: 67 ELRCTFGGRSIVPDLSVFAWSNIPRDDDGKIANFFPLAPNWAIEILSPDQSQTRVIRNIL 126
#
# Query: 129 FSLKAGTELAWLVDPMAKSI-TVFTASLPQVYLAETEIQESLTVFAELENWSITAAEVFD 187
# L G+E+ WL+DP + I T + P ++ +I T + L+ I VFD
# Sbjct: 127 HCLNHGSEMGWLIDPAEQIIFTYISGKQPNIFDQAEQILPVPTFASSLQ---INFGLVFD 183
#
# Query: 188 WL 189
# WL
# Sbjct: 184 WL 185
#
#
# >sll0913
# Length = 201
#
# Score = 176 bits (446), Expect = 3e-44
# Identities = 94/193 (48%), Positives = 124/193 (63%), Gaps = 4/193 (2%)
#
# Query: 2 VLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPD 61
# +LAS+ + TL L+ E PA EY G++TQKPMP+G+HS +Q+ L AIN +P
# Sbjct: 6 MLASSPITTLWEFLTLSHIEDSPAWEYVNGVITQKPMPQGQHSQLQYRLCQAINQVAEPL 65
#
# Query: 62 KIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVT 121
# ++AYALPELRCTF DRS+VPDI+V RWQ +PL G+IA+ F PDW+IEILSP QS T
# Sbjct: 66 RLAYALPELRCTFADRSLVPDISVFRWQRIPLTTDGDIANHFTSCPDWIIEILSPQQSAT 125
#
# Query: 122 LVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQ----VYLAETEIQESLTVFAELEN 177
# V+ I++ L+ G+EL WL+ P +SI VF P V AE +E L +
# Sbjct: 126 KVINNILYCLEQGSELGWLISPEERSILVFFPQYPPKFYGVEAAEMNNREELLPVLNGLD 185
#
# Query: 178 WSITAAEVFDWLK 190
# S+T AE+F WLK
# Sbjct: 186 LSLTTAEIFAWLK 198
#
#
# >alr2988
# Length = 188
#
# Score = 172 bits (437), Expect = 3e-43
# Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 5/182 (2%)
#
# Query: 11 LSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALPEL 70
# LSL FL LPETKPA E+ G + QKPMP+GKHST+Q LA IN P K AYA PEL
# Sbjct: 8 LSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKTAYAFPEL 67
#
# Query: 71 RCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFS 130
# RCTF RSIVPDIAV RW+ +P D GE+A+ F+ PDW IEILSP+QS T V + I+F
# Sbjct: 68 RCTFSGRSIVPDIAVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRVTDNILFC 127
#
# Query: 131 LKAGTELAWLVDPMAKSITVFTAS-LPQVYLAETEIQESLTVFAELENWSITAAEVFDWL 189
# L+ T L WL+DP K++ F + LP++ + + + L V + ++ +T ++F WL
# Sbjct: 128 LRHQTSLGWLIDPAEKAVICFLPNQLPEI---KRQFDDILPV-PDFLDFRLTVGQLFAWL 183
#
# Query: 190 KI 191
# K+
# Sbjct: 184 KL 185
#
#
# >all2905
# Length = 189
#
# Score = 166 bits (421), Expect = 2e-41
# Identities = 90/190 (47%), Positives = 120/190 (62%), Gaps = 5/190 (2%)
#
# Query: 1 MVLASAKVPTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKP 60
# M L++ +LE FL LPETKPA EY G + QK P+G+HST+Q L AIN KP
# Sbjct: 1 MSLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKP 60
#
# Query: 61 DKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSV 120
# K+AYA PELRCTF SIVPDIAV W +PL G IA++F+ + DW+IEILSP+QS
# Sbjct: 61 QKLAYAFPELRCTFSGNSIVPDIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSP 120
#
# Query: 121 TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTAS-LPQVYLAETEIQESLTVFAELENWS 179
# V+ KI+FS++ G +L W +DP +SI VF LP++ ++ L V + L NW
# Sbjct: 121 NRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIKAG----KDILPVMSVLANWQ 176
#
# Query: 180 ITAAEVFDWL 189
# +T ++F L
# Sbjct: 177 LTVEDIFSCL 186
#
#
# >alr1444
# Length = 186
#
# Score = 157 bits (398), Expect = 1e-38
# Identities = 84/179 (46%), Positives = 111/179 (61%), Gaps = 2/179 (1%)
#
# Query: 11 LSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALPEL 70
# ++L+ FL LP T+PA EY G + QKPMP+GKHS IQ E IN+ VKP +IA A PEL
# Sbjct: 9 ITLDEFLKLPATEPASEYIEGKIIQKPMPQGKHSAIQGEFVPVINSVVKPQRIARAFPEL 68
#
# Query: 71 RCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFS 130
# RCTF RS VPDI+V W +P + GEIA+ F APDW IEILSPDQS T V + I+
# Sbjct: 69 RCTFVGRSTVPDISVFIWSRIPREENGEIANNFSIAPDWTIEILSPDQSQTKVTKNILHC 128
#
# Query: 131 LKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSITAAEVFDWL 189
# LK GT++ WL+DP +++ V+ E + ++ FA +T ++F WL
# Sbjct: 129 LKHGTQMGWLIDPDEQTVFVYHPQQETEVFDEPDALIAVPSFA--SELQLTIQDLFSWL 185
#
#
# >sll1250
# Length = 128
#
# Score = 135 bits (340), Expect = 6e-32
# Identities = 68/109 (62%), Positives = 82/109 (74%)
#
# Query: 11 LSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALPEL 70
# L+L FLALPE KP EY G V+ KPMPKGKHST+Q L+ AIN +K +KIA+A EL
# Sbjct: 17 LTLTEFLALPEEKPPLEYRDGQVSAKPMPKGKHSTLQTALSFAINMALKKEKIAWAFTEL 76
#
# Query: 71 RCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQS 119
# RC+F +RSIVPDIAV W+N+P D GEIAD F P+W+IEILSP+QS
# Sbjct: 77 RCSFENRSIVPDIAVFTWENIPCDQDGEIADNFYLPPNWMIEILSPEQS 125
#
#
# >sll1355
# Length = 181
#
# Score = 94.4 bits (233), Expect = 1e-19
# Identities = 69/162 (42%), Positives = 92/162 (56%), Gaps = 11/162 (6%)
#
# Query: 1 MVLASAKVPTLSLESFL--ALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQV 58
# M + + + T +L+ FL A E PA E+ RG QKPMP HS +Q L INAQ
# Sbjct: 1 MQIMQSPLLTDNLDLFLQRAEIEASPAWEFIRGQAQQKPMPTLFHSRLQRNLVNVINAQT 60
#
# Query: 59 KPDKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQ 118
# + + A+ ELRC S VPDIAV++ NL + G + APDWLIEILSPDQ
# Sbjct: 61 RDYE---AIQELRCIVPPFSPVPDIAVVK-SNLLAEEDGPLKG----APDWLIEILSPDQ 112
#
# Query: 119 SVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTA-SLPQVY 159
# ++ + KI+ L GT+LAWL+D + I V+ SLP +Y
# Sbjct: 113 NILSLQTKILHCLTNGTKLAWLIDIYRQQIWVWNQESLPLIY 154
#
#
# >sll0198
# Length = 191
#
# Score = 58.5 bits (140), Expect = 8e-09
# Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 23/195 (11%)
#
# Query: 9 PTLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQ----FELAAAINAQVKPDKIA 64
# P L+LE F LPE + E G K PK HS++Q F L+ N+Q P
# Sbjct: 8 PPLTLEEFSCLPEGEVNYELQDGTAIAKMSPKRIHSSLQRTLLFLLSDWGNSQDCPLP-G 66
#
# Query: 65 YALPE----LRCTFGDRSIVPDIAVMRWQNL---PLDNGGEIADRFDRAPDWLIEILSPD 117
# A PE L+ D + VPD+ + Q L L+N D AP+ ++EI+SPD
# Sbjct: 67 EAYPEWGICLQKDGQDWAPVPDVTYISDQKLTPFALEN-----DFCPVAPELVVEIISPD 121
#
# Query: 118 QSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQV-YLAETEIQESLTVFAELE 176
# QS + +K + L AG E W++ +S+T+F P + Y + +++ L L
# Sbjct: 122 QSFEAMTQKALDYLAAGVERVWIIGDRHRSLTIFAPDRPPLTYQGDQLVEDDL-----LP 176
#
# Query: 177 NWSITAAEVFDWLKI 191
# S T E+F K+
# Sbjct: 177 QLSFTVNELFAKAKV 191
#
#
# >slr0885
# Length = 191
#
# Score = 44.7 bits (104), Expect = 1e-04
# Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
#
# Query: 81 PDIAVM---RWQNLPLDNGGEIADRFDR-APDWLIEILSPDQSVTLVMEKIIFSLKAGTE 136
# PDI+ + RW LD E ++F PD+++E+LSP ++T K+ L +G
# Sbjct: 88 PDISWVKKERW----LDLSTEEREKFPPICPDFVLELLSPSDTLTATQAKMEEYLASGLC 143
#
# Query: 137 LAWLVDPMAKSITVFTASLPQVYLAE 162
# L WL+DP + + V+ ++LP+ L +
# Sbjct: 144 LGWLIDPQGQRVEVYRSNLPKEILVK 169
#
#
# >slr0300
# Length = 194
#
# Score = 40.4 bits (93), Expect = 0.002
# Identities = 16/50 (32%), Positives = 30/50 (60%)
#
# Query: 107 PDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLP 156
# PD+++E+LSP ++ K+ L GTEL WL++P+ + + ++ P
# Sbjct: 115 PDFVLELLSPSDALAATQAKMREYLSCGTELGWLINPIDQQVEIYRPDSP 164
#
#
# >alr1224
# Length = 192
#
# Score = 38.5 bits (88), Expect = 0.008
# Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 22/153 (14%)
#
# Query: 49 ELAAAINAQVKPDKI--------AYALPELRCTFGDRSIV-------PDIAVMRWQNLPL 93
# EL + V+P K+ + LP L G + + PD++ +R + L +
# Sbjct: 42 ELIRLLGNWVRPRKLGRVTGSSAGFILPRLETENGIEADIEKRNLRAPDVSFVRAERLKI 101
#
# Query: 94 DNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTA 153
# D + PD ++EI S + + EKI L+ G+ + L+DP ++TV+
# Sbjct: 102 SK----RDFVELVPDLMVEIKSKSDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRI 157
#
# Query: 154 SLPQVYLAETEIQESLTVFAELENWSITAAEVF 186
# + V L + LT+ L W +T +E++
# Sbjct: 158 NQEPVILQN---NDKLTLPDLLPGWELTVSEIW 187
#
#
# >alr0559
# Length = 192
#
# Score = 38.5 bits (88), Expect = 0.008
# Identities = 21/79 (26%), Positives = 39/79 (48%), Gaps = 5/79 (6%)
#
# Query: 83 IAVMRWQNLPLDNGGEIADRFDR-APDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLV 141
# I + RW L L ++F PD+++E++SP S+ K+ + AG +L WL+
# Sbjct: 94 IEISRWNELSLAQ----REKFPPITPDFVLELMSPSDSLNQTQAKMEEYMNAGVKLGWLI 149
#
# Query: 142 DPMAKSITVFTASLPQVYL 160
# D + + ++ P+ L
# Sbjct: 150 DRKTRRVEIYRQGQPKEVL 168
#
#
# >sll0488
# Length = 203
#
# Score = 38.1 bits (87), Expect = 0.012
# Identities = 15/50 (30%), Positives = 30/50 (60%)
#
# Query: 107 PDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLP 156
# PD+++E+ S S+ + EK+ ++ G +L WL+DP K + ++ + P
# Sbjct: 125 PDFVVELRSKTDSLKKLQEKMQEYMENGAQLGWLIDPQNKKVEIYRSGQP 174
#
#
# >all7113
# Length = 171
#
# Score = 37.7 bits (86), Expect = 0.017
# Identities = 28/106 (26%), Positives = 50/106 (46%), Gaps = 7/106 (6%)
#
# Query: 81 PDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWL 140
# PD++ +R + L D + PD +E+ S + + EKI L+ G+ + L
# Sbjct: 68 PDVSFVRAERLKKTQ----RDFVELVPDLTVEVKSKSDRIKPLQEKIKLFLELGSTVGIL 123
#
# Query: 141 VDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSITAAEVF 186
# +DP +TV+ +L V L + + LT+ L W + AE++
# Sbjct: 124 IDPDKVLVTVYRRNLEPVVLKD---NDKLTLPELLPGWELEIAELW 166
#
#
# >slr0981
# Length = 187
#
# Score = 37.4 bits (85), Expect = 0.018
# Identities = 23/82 (28%), Positives = 41/82 (49%), Gaps = 2/82 (2%)
#
# Query: 75 GDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAG 134
# GDRS PD+A + N E PD++IE+ S + + +K++ L +G
# Sbjct: 84 GDRS--PDVAWVSRGNWEKLTPAEREGFPPICPDFVIELRSKSDRLKPLQDKMLEYLTSG 141
#
# Query: 135 TELAWLVDPMAKSITVFTASLP 156
# +L WL++P K + ++ + P
# Sbjct: 142 LQLGWLINPQQKQVEIYRQNQP 163
#
#
# >sll0740
# Length = 235
#
# Score = 37.0 bits (84), Expect = 0.027
# Identities = 15/45 (33%), Positives = 29/45 (64%)
#
# Query: 107 PDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVF 151
# PD++IE+ SP ++ + EK+ L+ GT L WL++ +K + ++
# Sbjct: 159 PDFVIELRSPSDNLKPLQEKMQEYLENGTRLGWLINRQSKEVEIY 203
#
#
# >aq_037
# Length = 175
#
# Score = 36.2 bits (82), Expect = 0.050
# Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
#
# Query: 11 LSLESFLALPETKPAQEYCRGIVTQKPMPKG-KHSTIQFELAAAINAQVKPDKIAYALPE 69
# LS E LPE + E G V + +P G +H + +L A + ++K +K A+ E
# Sbjct: 7 LSYEDIRRLPEG--SYEVINGEVVEL-VPTGFEHGEYELDLGAFLREKLK-NKGYVAVGE 62
#
# Query: 70 LRCTFGDRSI---VPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEK 126
# + + D+ + + P G + D P+ +IEI+SP+ + + + EK
# Sbjct: 63 VGVLISKEPLRIRSADVVYISKKRTPERPKGIL----DVPPEIVIEIVSPNNTYSEIEEK 118
#
# Query: 127 IIFSLKAGTELAWLVDPMAKSITVF 151
# + L AG + +VDP + T+F
# Sbjct: 119 VFDYLSAGVDRVLIVDPKVRKATLF 143
#
#
# >alr4854
# Length = 191
#
# Score = 35.8 bits (81), Expect = 0.064
# Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
#
# Query: 76 DRSIVPDIAVM---RWQNLPLDNGGEIADRF-DRAPDWLIEILSPDQSVTLVMEKIIFSL 131
# DRS PD++ + RW+ L E ++F PD++IEI+SP S+ V EK+
# Sbjct: 86 DRS--PDVSWVEKSRWEALT----KEQREKFIPLCPDFVIEIMSPSDSLKKVQEKMFEYR 139
#
# Query: 132 KAGTELAWLVDPMAKSITVF 151
# G L WL++ + + ++
# Sbjct: 140 SNGCRLGWLINRKRQEVEIY 159
#
#
# >BH0309
# Length = 338
#
# Score = 35.4 bits (80), Expect = 0.066
# Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
#
# Query: 108 DWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQE 167
# DWL+ + D SV EKI+ A E+ L + + +T+ T SL + Y+A TE+ +
# Sbjct: 94 DWLVWV---DSSVDGYYEKILAMNLANGEIQTLAETNPEYLTLLTPSLYKEYVAWTELND 150
#
# Query: 168 SLTVFAELEN 177
# + V +L N
# Sbjct: 151 EMQVEVKLHN 160
#
#
# >all2275
# Length = 194
#
# Score = 34.3 bits (77), Expect = 0.15
# Identities = 14/49 (28%), Positives = 29/49 (58%)
#
# Query: 106 APDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTAS 154
# APD++IE+ S + + +K+ + AG +L WL++P + + ++ S
# Sbjct: 115 APDFVIELRSATDDLEKLRQKMREYIDAGVQLGWLINPQQQQVEIYRQS 163
#
#
# >all4143
# Length = 191
#
# Score = 34.3 bits (77), Expect = 0.16
# Identities = 23/72 (31%), Positives = 39/72 (53%), Gaps = 2/72 (2%)
#
# Query: 81 PDIAVMRWQNLPLDNGGEIADRF-DRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAW 139
# PD A + LP +N + D+F + APD++I I S + S+T + K+ + G +L W
# Sbjct: 89 PDAAFVAKGRLP-ENWDQQEDKFINLAPDFVIGIRSKNDSLTKLKAKMEEYIANGVKLGW 147
#
# Query: 140 LVDPMAKSITVF 151
# L+D + V+
# Sbjct: 148 LIDSKNQQALVY 159
#
#
# >alr1074
# Length = 219
#
# Score = 34.3 bits (77), Expect = 0.17
# Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
#
# Query: 87 RWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAK 146
# RW+ +P++ A P++++E+ S ++ + EK+ + GTEL WL+D +
# Sbjct: 126 RWEAIPVEQRKRFA---PICPEFVVELRSETDNLKTLQEKMEEYIDNGTELGWLIDRKQR 182
#
# Query: 147 SITVF 151
# + ++
# Sbjct: 183 KVFIY 187
#
#
# >slr2092
# Length = 133
#
# Score = 32.7 bits (73), Expect = 0.47
# Identities = 32/115 (27%), Positives = 56/115 (47%), Gaps = 13/115 (11%)
#
# Query: 76 DRSIVPDIAVM---RWQNLPLDNGGEIADRF-DRAPDWLIEILSPDQSVTLVMEKIIFSL 131
# DRS PD A + RW++L E RF PD++IE+ SP + + +K+
# Sbjct: 28 DRS--PDAAWLKRERWESLT----PEQKQRFVPLCPDFVIELRSPSDELKPLRKKMQEYQ 81
#
# Query: 132 KAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSITAAEVF 186
# + G +L WL+D +++ ++ P + E ESL+ A L + + A ++
# Sbjct: 82 ENGAQLGWLIDRQTRTVEIYR---PGQAVEVLENPESLSGEAVLPEFVLELASIW 133
#
#
# >DR0469
# Length = 186
#
# Score = 32.3 bits (72), Expect = 0.56
# Identities = 29/112 (25%), Positives = 49/112 (42%), Gaps = 13/112 (11%)
#
# Query: 11 LSLESFLALPETKPAQ-EYCRGIVTQKPMPKG---KHSTIQFELAAAINAQVKPDKIAYA 66
# +S+E +L E P + EY G + G HS I + A ++ +
# Sbjct: 9 MSVEEYLRSEENSPVKHEYVAGFIYPLHAQAGVSRTHSAISVNIVATLHPHARKQGCRLH 68
#
# Query: 67 LPELRCTFGDRSIV--PDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSP 116
# L ++R +R+ PD+ ++ D G ++A + AP L+EILSP
# Sbjct: 69 LADMRLRIEERNTFYYPDVMLV----CDTDTGSDLA---ETAPCLLVEILSP 113
#
#
# >all4364
# Length = 207
#
# Score = 32.0 bits (71), Expect = 0.77
# Identities = 20/69 (28%), Positives = 36/69 (51%), Gaps = 7/69 (10%)
#
# Query: 107 PDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQ 166
# PD++IE+LSP S+ + EK+ + G L L++ ++ + ++ E E+
# Sbjct: 131 PDFVIELLSPSDSLKVAQEKMREYIDNGVRLGLLINRKSRQVEIYRQG------KEVEVL 184
#
# Query: 167 ES-LTVFAE 174
# ES +TV E
# Sbjct: 185 ESPVTVSGE 193
#
#
# >sll1938
# Length = 203
#
# Score = 31.6 bits (70), Expect = 1.1
# Identities = 26/119 (21%), Positives = 52/119 (42%), Gaps = 12/119 (10%)
#
# Query: 73 TFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLK 132
# + G + PD++ + L G EI PD++IE+ S ++ + EK+ +
# Sbjct: 96 SLGGGKLSPDVSWIEQSKL---EGIEIVGFIPVVPDFVIELRSATDNLKPLQEKMQEYRR 152
#
# Query: 133 AGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVFAELENWSITAAEVFDWLKI 191
# G L L++P + + ++ +S + E LT+ E++ + V D +I
# Sbjct: 153 LGVRLGLLINPQNQQVEIYRSS---------QATEVLTLPKEIDCNEVMPGFVLDLTRI 202
#
#
# >alr3200
# Length = 201
#
# Score = 30.8 bits (68), Expect = 1.7
# Identities = 33/123 (26%), Positives = 52/123 (41%), Gaps = 18/123 (14%)
#
# Query: 10 TLSLESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIAYALPE 69
# TL+ E FL P E G + P G H T+ +LA I + +++ + +P
# Sbjct: 8 TLTCEDFLCQYRDNPRYELADGELIDME-PTGPHETVSGKLATQIGIYLVSEQLPWFIPR 66
#
# Query: 70 --LRCTFGDRSIV--PDIAVMRWQNLPLDNGGEIADRFDRAPDWLIE-ILSPDQSVTLVM 124
# L F D + PDI V+ L DR P W E +++ +S+ LV+
# Sbjct: 67 TCLIYPFADTATARRPDIVVLDETVL------------DREPLWTREPVITTGRSIKLVV 114
#
# Query: 125 EKI 127
# E +
# Sbjct: 115 EVV 117
#
#
# >alr3907
# Length = 192
#
# Score = 30.4 bits (67), Expect = 2.1
# Identities = 13/45 (28%), Positives = 25/45 (54%)
#
# Query: 107 PDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKSITVF 151
# PD+ +E++S V K++ L G +L WL++P K + ++
# Sbjct: 115 PDFAVELVSETDDVEDTQAKMLEYLANGLQLGWLINPKDKLVIIY 159
#
#
# >alr1923
# Length = 200
#
# Score = 29.6 bits (65), Expect = 3.8
# Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
#
# Query: 87 RWQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAK 146
# RW L ++ A PD+++E+ S + S+ + KI + G L WL+D +
# Sbjct: 106 RWNALNIEQQETFA---PICPDFVLELRSKNDSIEKLRAKIREYIDNGARLGWLIDRKNR 162
#
# Query: 147 SITVF 151
# + V+
# Sbjct: 163 QVEVY 167
#
#
# >aq_1194
# Length = 180
#
# Score = 29.6 bits (65), Expect = 4.3
# Identities = 37/141 (26%), Positives = 58/141 (40%), Gaps = 9/141 (6%)
#
# Query: 14 ESFLALPETKPAQEYCRGIVTQKPMPKGKHSTIQFELAAAINAQVKPDKIA--YALPELR 71
# + +L LP+ K E G + + P P H I +L ++ V+ ++ + P
# Sbjct: 11 KDYLKLPDDK-RYEIINGELLEVPAPTTTHQRIVGKLFRILSDFVESKELGEVFVSPVDV 69
#
# Query: 72 CTFGDRSIVPDIAVMRWQNLPLDNGGEIADR-FDRAPDWLIEILSPDQSVTLVMEKIIFS 130
# D PDI + D I +R APD +IE++SP +K
# Sbjct: 70 ILSEDNVFQPDIVF-----VSKDRKEIIKERGIFGAPDLVIEVISPSTLKRDTEDKKKVY 124
#
# Query: 131 LKAGTELAWLVDPMAKSITVF 151
# KA + WLV P K++ VF
# Sbjct: 125 EKACVKELWLVFPGEKAVEVF 145
#
#
# >alr5230
# Length = 364
#
# Score = 29.6 bits (65), Expect = 4.5
# Identities = 14/64 (21%), Positives = 33/64 (50%)
#
# Query: 88 WQNLPLDNGGEIADRFDRAPDWLIEILSPDQSVTLVMEKIIFSLKAGTELAWLVDPMAKS 147
# W G ++ DR+P+ L+++LS ++S ++++ + + WLVD + +
# Sbjct: 49 WNGAAEIEGFSVSKISDRSPNALLDLLSTNRSSSILLHYVGYGYAQRGCPVWLVDGLQRC 108
#
# Query: 148 ITVF 151
# ++F
# Sbjct: 109 KSLF 112
#
#
# >VNG0390G
# Length = 342
#
# Score = 28.9 bits (63), Expect = 7.4
# Identities = 37/136 (27%), Positives = 56/136 (40%), Gaps = 17/136 (12%)
#
# Query: 54 INAQVKPDKIAYALPELRCTFGDRSIVPDIAVMRWQNLPLDNGGEIADRFDRAPDWLIEI 113
# IN Q KPD L + C S+V DI AD P W +E
# Sbjct: 175 INFQEKPDDPNSTLVSIACYAYPESVVEDIDTYL-----------AADGNPDEPGWFVEW 223
#
# Query: 114 LSPDQSV-TLVMEKIIFSLKAGTELAWLVDPMAKSITVFTASLPQVYLAETEIQESLTVF 172
# L QSV E F + GT ++L D +A ++ + ++ T I E++ V
# Sbjct: 224 LQDRQSVRAFTFEGAWFDI--GTPESYL-DAVAWTLDGDSIVADDATVSNTTIGENVHVL 280
#
# Query: 173 --AELENWSITAAEVF 186
# AEL N +++ + +F
# Sbjct: 281 PGAELTNSTVSNSVIF 296
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,189,777
Number of Sequences: 192987
Number of extensions: 807769
Number of successful extensions: 1916
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1872
Number of HSP's gapped (non-prelim): 48
length of query: 191
length of database: 59,019,183
effective HSP length: 103
effective length of query: 88
effective length of database: 39,141,522
effective search space: 3444453936
effective search space used: 3444453936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
S2: 62 (28.5 bits)