NLR family, pyrin domain containing 6 (Nlrp6)

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UGID:381865 UniGene Rn.9669 Rattus norvegicus (Norway rat) Nlrp6

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NLR family, pyrin domain containing 6 (Nlrp6)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_599202.2	NLR family, pyrin domain containing 6	R. norvegicus	100.0	879
NP_001074858.1	NLR family, pyrin domain containing 6	M. musculus	84.1	881
NP_612202.1	NLR family, pyrin domain containing 6	H. sapiens	75.2	891

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	kidney; small intestine; colon; mixed; eye

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1q41

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

M85183.1	Rattus norvegicus angiotensin/vasopressin receptor (AII/AVP) mRNA, complete cds	P
NM_134375.3	Rattus norvegicus NLR family, pyrin domain containing 6 (Nlrp6), mRNA	P
DQ631800.1	Rattus norvegicus dual angiotensin II/vasopressin receptor mRNA, complete cds	P

EST sequences (12)

AA997492.1	Clone UI-R-C0-hw-e-04-0-UI	mixed	3' read	P
BE096743.1	Clone UI-R-BU0-apm-c-04-0-UI	eye	3' read	P
BF561521.1	Clone UI-R-C0-hw-e-04-0-UI	mixed	5' read	P
BI282198.1	Clone UI-R-CU0s-cbx-g-08-0-UI	kidney	3' read	A
BQ202420.1	Clone UI-R-EB1-clg-o-10-0-UI	small intestine	3' read	A
CB606610.1	Clone cr1-00143-d11	colon	3' read	P
CB710572.1	Clone cr3-00016-f8	colon	5' read
CB730083.1	Clone cr3-00002-e5	colon	5' read	P
CK471302.1	Clone IMAGE:7126007	kidney	5' read	P
CK472749.1	Clone IMAGE:7128035	kidney	5' read	P
CK473215.1	Clone IMAGE:7128389	kidney	5' read	P
CN543015.1	Clone UI-R-EB1-clp-p-06-0-UI	small intestine	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria