BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_0991 putative structural protein - phage associated
(188 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_596569.1| major tail protein [Streptococcus phage 94... 379 e-104
ref|NP_269173.1| putative structural protein - phage associ... 377 e-103
ref|YP_280451.1| phage protein [Streptococcus pyogenes MGAS... 323 3e-87
ref|NP_607368.1| putative structural phage protein [Strepto... 308 1e-82
ref|YP_060874.1| Major tail protein [Streptococcus pyogenes... 274 3e-72
ref|YP_811373.1| hypothetical protein LACR_1766 [Lactococcu... 147 3e-34
ref|NP_108722.1| hypothetical protein Tuc2009_43 [Lactococc... 147 4e-34
ref|NP_112705.1| MTP [Lactococcus phage TP901-1] >gi|136994... 145 2e-33
ref|YP_809099.1| hypothetical protein LACR_1143 [Lactococcu... 145 2e-33
ref|NP_691131.1| bacteriophage related protein [Oceanobacil... 121 3e-26
ref|NP_815008.1| major tail protein [Enterococcus faecalis ... 113 8e-24
ref|YP_238498.1| tail protein [Streptococcus phage 2972] >g... 103 5e-21
ref|YP_001686810.1| orf16 [Streptococcus phage 858] >gi|155... 103 7e-21
ref|NP_695115.1| putative structural protein [Streptococcus... 103 7e-21
ref|NP_056686.1| gp168 [Streptococcus phage Sfi11] >gi|3320... 100 5e-20
ref|YP_001004313.1| hypothetical protein phiETA2_gp53 [Stap... 82 3e-14
ref|YP_239731.1| ORF025 [Staphylococcus phage 85] >gi|62635... 81 3e-14
ref|NP_803292.1| structural phi Mu50B [Staphylococcus phage... 81 3e-14
ref|YP_239653.1| ORF025 [Staphylococcus phage 53] >gi|14871... 81 3e-14
ref|NP_371422.1| hypothetical protein SAV0898 [Staphylococc... 79 1e-13
ref|YP_001332059.1| phage major tail protein [Staphylococcu... 79 1e-13
ref|YP_417178.1| hypothetical phage-related protein [Staphy... 79 1e-13
ref|NP_958543.1| hypothetical protein Ljo_1428 [Lactobacill... 75 2e-12
ref|YP_950595.1| major tail protein [Streptococcus phage SM... 70 1e-10
ref|YP_239499.1| ORF022 [Staphylococcus phage 187] >gi|6263... 67 6e-10
ref|ZP_01273336.1| Phage major tail 2 [Lactobacillus reuter... 61 4e-08
ref|YP_804296.1| hypothetical protein PEPE_0793 [Pediococcu... 56 1e-06
ref|YP_807120.1| hypothetical protein LSEI_1920 [Lactobacil... 52 3e-05
ref|NP_690680.1| hypothetical protein SPP1p029 [Bacillus ph... 41 0.038
ref|YP_710298.1| hypothetical protein SPP1p107 [Bacillus ph... 41 0.047
ref|XP_001018517.1| hypothetical protein TTHERM_00346700 [T... 35 1.8
ref|ZP_01815932.1| RTX (repeat in toxin) cytotoxin [Vibrion... 34 5.3
ref|NP_966604.1| hypothetical protein WD0854 [Wolbachia end... 33 9.0
ref|ZP_01315145.1| hypothetical protein Wendoof_01000008 [W... 33 9.7
>ref|YP_596569.1| major tail protein [Streptococcus phage 9429.2]
gb|ABF32025.1| major tail protein [Bacteriophage 9429.2]
Length = 217
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA 60
METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA
Sbjct: 30 METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA 89
Query: 61 LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN 120
LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN
Sbjct: 90 LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN 149
Query: 121 GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY 180
GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY
Sbjct: 150 GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY 209
Query: 181 AFKDTTKG 188
AFKDTTKG
Sbjct: 210 AFKDTTKG 217
>ref|NP_269173.1| putative structural protein - phage associated [Streptococcus phage
370.3]
gb|AAK33894.1| putative structural protein - phage associated [Streptococcus phage
370.3]
Length = 188
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA 60
METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA
Sbjct: 1 METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA 60
Query: 61 LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN 120
LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN
Sbjct: 61 LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN 120
Query: 121 GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY 180
GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY
Sbjct: 121 GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY 180
Query: 181 AFKDTTKG 188
AFKDTTKG
Sbjct: 181 AFKDTTKG 188
>ref|YP_280451.1| phage protein [Streptococcus pyogenes MGAS6180]
gb|AAX72096.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 222
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/184 (94%), Positives = 176/184 (95%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
QLEAKQGIHSILLFRLLKEASSE ATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY
Sbjct: 25 QLEAKQGIHSILLFRLLKEASSEVATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 84
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
DFKATSILAKGD LAAKLEKAME+GELVEIWDID EE SKNGDSDNKLA VWGI+KNGTN
Sbjct: 85 DFKATSILAKGDELAAKLEKAMEDGELVEIWDIDSEEISKNGDSDNKLAKVWGINKNGTN 144
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
GNGK LATYYQGYISSFSAKKNAEENI IEMEFAINGVG+KGFATLTDAQKAAVQYAFK
Sbjct: 145 GGNGKCLATYYQGYISSFSAKKNAEENIVIEMEFAINGVGKKGFATLTDAQKAAVQYAFK 204
Query: 184 DTTK 187
DTTK
Sbjct: 205 DTTK 208
>ref|NP_607368.1| putative structural phage protein [Streptococcus pyogenes MGAS8232]
gb|AAL97867.1| putative structural phage protein [Streptococcus pyogenes MGAS8232]
Length = 201
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/183 (87%), Positives = 165/183 (90%), Gaps = 2/183 (1%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
QLEAKQGIHSILLFRLLKEASSE ATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY
Sbjct: 10 QLEAKQGIHSILLFRLLKEASSEVATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 69
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
DFKATSILAKGD LAAKLEKAME+GELVEIWDID EE SK D +N +A VW I KNGTN
Sbjct: 70 DFKATSILAKGDTLAAKLEKAMEDGELVEIWDIDSEEASKKND-ENGIAKVWDI-KNGTN 127
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
G KYLATYYQGYISSFSAKKNAEENI IEMEFAINGVG+KG ATLT+ QK AVQYAFK
Sbjct: 128 GGENKYLATYYQGYISSFSAKKNAEENIVIEMEFAINGVGKKGLATLTNDQKKAVQYAFK 187
Query: 184 DTT 186
DTT
Sbjct: 188 DTT 190
>ref|YP_060874.1| Major tail protein [Streptococcus pyogenes MGAS10394]
gb|AAT87691.1| Major tail protein [Streptococcus pyogenes MGAS10394]
Length = 197
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/182 (80%), Positives = 151/182 (82%), Gaps = 19/182 (10%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
E +GIHSILLFRLLKEAS + ATKLAFQTEHEVGKSRDVD +KTKDGIIQSVGALEYDF
Sbjct: 21 EVAEGIHSILLFRLLKEASEKPATKLAFQTEHEVGKSRDVDSKKTKDGIIQSVGALEYDF 80
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
KATSILAKGD LAAKLE+AME GELVEIWDID EE SK KNG+N
Sbjct: 81 KATSILAKGDELAAKLEEAMEKGELVEIWDIDSEEASK---------------KNGSN-- 123
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
KY ATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKG ATLTDAQKAAVQY FKDT
Sbjct: 124 --KYPATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGDATLTDAQKAAVQYNFKDT 181
Query: 186 TK 187
TK
Sbjct: 182 TK 183
>ref|YP_811373.1| hypothetical protein LACR_1766 [Lactococcus lactis subsp. cremoris
SK11]
gb|ABJ73260.1| hypothetical protein LACR_1766 [Lactococcus lactis subsp. cremoris
SK11]
Length = 169
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 18/185 (9%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
+L AKQG ILL+R+L +AS EAA KLAFQTEH K+RD + TKDG + ++ +EY
Sbjct: 3 ELTAKQGKDIILLYRVLSKASKEAAWKLAFQTEHSNEKTRDYNTTATKDGPVGALAEVEY 62
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
ATSI A GD +++KA ++ E++E+W+ID E + G+D
Sbjct: 63 SLSATSIAANGDPHLDEMDKAFDDAEIIEVWEIDKAEKATG-----------GLD----- 106
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
GKY A Y++ Y++SFS + N+E+ +E+ +EF + G QKG+ATLT Q VQY FK
Sbjct: 107 --TGKYKAKYHRAYLTSFSYEPNSEDALELSLEFGVFGKPQKGYATLTTEQANVVQYVFK 164
Query: 184 DTTKG 188
DT +G
Sbjct: 165 DTVRG 169
>ref|NP_108722.1| hypothetical protein Tuc2009_43 [Lactococcus phage Tuc2009]
ref|NP_663681.1| major tail protein [Lactococcus phage ul36]
gb|AAK19870.1|AF109874_43 unknown [Bacteriophage Tuc2009]
gb|AAM75794.1| major tail protein [Lactococcus phage ul36]
gb|ABD63683.1| putative major tail protein [Lactococcus phage ul36.k1]
Length = 165
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 22/185 (11%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
+L AKQG ILL+RLL +A+ EAA KLAFQTEH K+RD + TKDG I S+ A+EY
Sbjct: 3 ELTAKQGKDIILLYRLLSKATKEAAWKLAFQTEHSNEKTRDYNTTATKDGTIGSLAAIEY 62
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
ATSI A GD +++KA ++GE++E+W+ID E
Sbjct: 63 SLSATSIAANGDPHLDEMDKAFDDGEIIEVWEIDKAEKG--------------------- 101
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
+GKY A Y + Y++SFS + N+E+ +E+ +EF + G QKG ATLT+ Q VQY FK
Sbjct: 102 -SDGKYKAKYLRAYLTSFSYEPNSEDALELSLEFGVFGKPQKGQATLTEEQANVVQYVFK 160
Query: 184 DTTKG 188
DT G
Sbjct: 161 DTVAG 165
>ref|NP_112705.1| MTP [Lactococcus phage TP901-1]
emb|CAA59191.1| major tail protein [Bacteriophage B1]
gb|AAK38059.1| MTP [Lactococcus lactis bacteriophage TP901-1]
Length = 169
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 18/185 (9%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
+L AKQG ILL+R+L +AS+EAA KLAFQTEH K+RD + TKDG + ++ +EY
Sbjct: 3 ELTAKQGKDIILLYRVLSKASTEAAWKLAFQTEHSNEKTRDYNTTATKDGPVGALAEVEY 62
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
ATSI A GD +++KA ++ ++E+W+ID E + G+D
Sbjct: 63 SLSATSIAANGDPHLDEMDKAFDDAAIIEVWEIDKAEKA-----------TLGLD----- 106
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
+GKY A Y + Y++SFS + N+E+ +E+ +EF + G QKG+ATLT Q VQY FK
Sbjct: 107 --SGKYKAKYLRAYLTSFSYEPNSEDALELSLEFGVFGKPQKGYATLTTEQANVVQYVFK 164
Query: 184 DTTKG 188
DT +G
Sbjct: 165 DTVRG 169
>ref|YP_809099.1| hypothetical protein LACR_1143 [Lactococcus lactis subsp. cremoris
SK11]
gb|ABJ72677.1| hypothetical protein LACR_1143 [Lactococcus lactis subsp. cremoris
SK11]
Length = 169
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 18/185 (9%)
Query: 4 QLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEY 63
+L AKQG ILL+R+L +AS+EAA KLAFQTEH K+RD + TKDG + ++ +EY
Sbjct: 3 ELTAKQGKDIILLYRVLSKASTEAAWKLAFQTEHSNEKTRDYNTTATKDGPVGALAEVEY 62
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
ATSI A GD +++KA ++ ++E+W+ID E + G+D
Sbjct: 63 SLSATSIAANGDTHLDEMDKAFDDAAIIEVWEIDKAEKA-----------TLGLD----- 106
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
+GKY A Y + Y++SFS + N+E+ +E+ +EF + G QKG+ATLT Q +QY FK
Sbjct: 107 --SGKYKAKYLRAYLTSFSYEPNSEDALELSLEFGVFGKPQKGYATLTTEQANVIQYVFK 164
Query: 184 DTTKG 188
DT +G
Sbjct: 165 DTVRG 169
>ref|NP_691131.1| bacteriophage related protein [Oceanobacillus iheyensis HTE831]
dbj|BAC12166.1| bacteriophage related protein [Oceanobacillus iheyensis HTE831]
Length = 169
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 22/181 (12%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
E QG + +LLFRLL E+++EAA KL FQTEH SR +D TKDG I VG LE +
Sbjct: 3 EMLQGKNKVLLFRLLNESTNEAA-KLVFQTEHTFSYSRALDRIITKDGTIVKVGELESEV 61
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
+I +K D + LE A++ GE +E+W++ ++E+ K GD
Sbjct: 62 SIEAIQSKDDPVREMLESAVKKGEKIELWEVTVDESLKEGD------------------- 102
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
KY A Y QGY+ S+ + NAEE + F + Q G ATLT Q+ AVQY F+DT
Sbjct: 103 --KYPAVYAQGYLDSWESAANAEEQATVSSNFIVELEPQVGMATLTTEQEEAVQYVFQDT 160
Query: 186 T 186
Sbjct: 161 V 161
>ref|NP_815008.1| major tail protein [Enterococcus faecalis V583]
gb|AAO81078.1| major tail protein [Enterococcus faecalis V583]
Length = 170
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 22/182 (12%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
E QG ILL R L EA+++ A K FQ EHE SR+ G +TKDG+ +V LE
Sbjct: 3 EVMQGKDRILLVRRLDEAATKKAMKPLFQIEHEWEFSRESSGTQTKDGVANAVSGLEVTL 62
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
+ S LA D ++ A+E+G L+E WD+DL+ G
Sbjct: 63 -SLSGLASRDDENLYMKDAVEDGILMEFWDVDLK---------------------GEKNA 100
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
GKY A Y QGY++S+S N EE +EIE E +ING Q GFAT+ A QYAF+DT
Sbjct: 101 EGKYPAIYAQGYVNSWSLPANVEELVEIETEASINGKPQDGFATVEADIIAEAQYAFQDT 160
Query: 186 TK 187
Sbjct: 161 VP 162
>ref|YP_238498.1| tail protein [Streptococcus phage 2972]
gb|AAW27937.1| Tail protein [Streptococcus thermophilus bacteriophage 2972]
Length = 169
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 94/185 (50%), Gaps = 25/185 (13%)
Query: 2 ETQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGAL 61
+T EA G IL+FR K +AA KLA QTEHE SRD D KTKDG + + G L
Sbjct: 3 DTNKEALLGKDKILMFR--KFGDKKAAAKLALQTEHEWEYSRDADSTKTKDGAVVADGGL 60
Query: 62 EYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNG 121
E +I K D L L+K++ +G VE+W+IDL +
Sbjct: 61 ETKLSINAIGTKDD-LNEMLKKSVVDGYKVEVWEIDLAD--------------------- 98
Query: 122 TNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYA 181
+ NGKY A Y G +S++ N E+ +EIE E I G Q G ATLT Q +QY
Sbjct: 99 -KKSNGKYGALYAIGRLSNWKVPANVEDLVEIESELIIEGKPQAGEATLTGEQIKEIQYT 157
Query: 182 FKDTT 186
F+DTT
Sbjct: 158 FQDTT 162
>ref|YP_001686810.1| orf16 [Streptococcus phage 858]
gb|ABT18004.1| orf16 [Streptococcus phage 858]
Length = 169
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 93/185 (50%), Gaps = 25/185 (13%)
Query: 2 ETQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGAL 61
+T EA G IL+FR K AA KLA QTEHE SRD D KTKDG + + G L
Sbjct: 3 DTNKEALLGKDKILMFR--KFGDKTAAAKLALQTEHEWEYSRDADSTKTKDGAVVADGGL 60
Query: 62 EYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNG 121
E +I K D L L+K++ +G VE+W+IDL +
Sbjct: 61 ETKLSINAIGTKDD-LNEMLKKSVVDGYKVEVWEIDLAD--------------------- 98
Query: 122 TNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYA 181
+ NGKY A Y G +S++ N E+ +EIE E I G Q G ATLT Q +QY
Sbjct: 99 -KKSNGKYGALYAIGRLSNWKVPANVEDLVEIESELIIEGKPQAGEATLTGEQIKEIQYT 157
Query: 182 FKDTT 186
F+DTT
Sbjct: 158 FQDTT 162
>ref|NP_695115.1| putative structural protein [Streptococcus phage O1205]
gb|AAC79552.1| ORF37 [Streptococcus thermophilus temperate bacteriophage O1205]
Length = 168
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
EA G IL+FR L + + AA KLA QTEHE SRD D KTKDG + + G LE
Sbjct: 6 EALLGKDKILMFRKLGDKT--AAAKLALQTEHEWEYSRDADSTKTKDGAVVADGGLETKL 63
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
++I K D L L+K++ +G VE+W+IDL + +
Sbjct: 64 SISAIGTKDD-LNEMLKKSVVDGYKVEVWEIDLAD----------------------KKS 100
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
+GKY A Y G +S++ N E+ +EIE E I G Q G ATLT Q +QY F+DT
Sbjct: 101 DGKYGALYAIGRLSNWKVPANVEDLVEIESELTIEGKPQAGEATLTSDQIKEIQYTFQDT 160
Query: 186 T 186
T
Sbjct: 161 T 161
>ref|NP_056686.1| gp168 [Streptococcus phage Sfi11]
gb|AAC34408.1| gp168 [Streptococcus thermophilus bacteriophage Sfi11]
Length = 168
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
EA G IL+FR L + + AA KLA QTEHE SRD D KTKDG + + G LE
Sbjct: 6 EALLGKDKILMFRKLGDKT--AARKLALQTEHEWEYSRDADSTKTKDGAVVADGGLETKL 63
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
++I K D L L+ ++ +G VE+W+IDL + +
Sbjct: 64 SISAIGTKDD-LNEMLKNSVVDGYKVEVWEIDLAD----------------------KKS 100
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
GKY A Y G +S++ N E+ +EIE E I G Q G ATLT Q +QY F+DT
Sbjct: 101 GGKYGALYAIGRLSNWKVPANVEDLVEIESELTIEGKPQAGEATLTSDQIKEIQYTFQDT 160
Query: 186 T 186
T
Sbjct: 161 T 161
>ref|YP_001004313.1| hypothetical protein phiETA2_gp53 [Staphylococcus phage phiETA2]
dbj|BAF43868.1| hypothetical protein [Bacteriophage phi ETA2]
Length = 193
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGD+ K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDA-------------------TKFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL DA + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPDAVTKKLKATGYRFHDTTK 166
>ref|YP_239731.1| ORF025 [Staphylococcus phage 85]
gb|AAX90934.1| ORF025 [Bacteriophage 85]
Length = 193
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGDS K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDS-------------------AKFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTK 166
>ref|NP_803292.1| structural phi Mu50B [Staphylococcus phage 11]
ref|YP_500531.1| phage structural protein, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gb|AAL82267.1| structural phi Mu50B [Staphylococcus aureus phage phi 11]
gb|ABD31090.1| phage structural protein, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
Length = 193
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGDS K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDS-------------------AKFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTK 166
>ref|YP_239653.1| ORF025 [Staphylococcus phage 53]
ref|YP_001285367.1| major tail protein [Staphylococcus phage 80alpha]
gb|AAX90855.1| ORF025 [Bacteriophage 53]
gb|ABF71624.1| major tail protein [Staphylococcus phage 80alpha]
Length = 193
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGDS K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDS-------------------AKFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTK 166
>ref|NP_371422.1| hypothetical protein SAV0898 [Staphylococcus aureus subsp. aureus
Mu50]
ref|YP_239576.1| ORF023 [Staphylococcus phage 69]
ref|YP_873998.1| major tail protein [Staphylococcus phage phiNM]
ref|YP_001246275.1| phage major tail protein, TP901-1 family [Staphylococcus aureus
subsp. aureus JH9]
ref|YP_001316059.1| phage major tail protein, TP901-1 family [Staphylococcus aureus
subsp. aureus JH1]
ref|YP_001332817.1| phage major tail protein [Staphylococcus aureus subsp. aureus str.
Newman]
ref|YP_001441483.1| hypothetical protein SAHV_0893 [Staphylococcus aureus subsp. aureus
Mu3]
dbj|BAB57060.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gb|AAX90777.1| ORF023 [Bacteriophage 69]
gb|ABF73079.1| major tail protein [Staphylococcus aureus phage phiNM1]
gb|ABQ48699.1| phage major tail protein, TP901-1 family [Staphylococcus aureus
subsp. aureus JH9]
gb|ABR51772.1| phage major tail protein, TP901-1 family [Staphylococcus aureus
subsp. aureus JH1]
dbj|BAF68055.1| phage major tail protein [Staphylococcus aureus subsp. aureus str.
Newman]
dbj|BAF77776.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 193
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGD+ K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDAT-------------------KFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTK 166
>ref|YP_001332059.1| phage major tail protein [Staphylococcus aureus subsp. aureus str.
Newman]
gb|ABF73145.1| major tail protein [Staphylococcus aureus phage phiNM2]
dbj|BAF67297.1| phage major tail protein [Staphylococcus aureus subsp. aureus str.
Newman]
Length = 193
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ +
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ KNGD+ K+ A Y
Sbjct: 69 GDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDA-------------------TKFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTK 166
>ref|YP_417178.1| hypothetical phage-related protein [Staphylococcus aureus RF122]
emb|CAI81405.1| hypothetical phage-related protein [Staphylococcus aureus RF122]
Length = 193
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
I+LFR K ATK+ F TE+ + D D + T DG + G++E T+ ++
Sbjct: 11 IILFR--KAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMSY 68
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
GD A ++E A+ + L E W+++ K GD+ K+ A Y
Sbjct: 69 GDAFADEIEDAVVDRVLYEAWEVESRIPGKGGDAT-------------------KFKAKY 109
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDA---QKAAVQYAFKDTTK 187
+QG+ + F K A E E E+ +NG Q+GFATL +A + A Y F DTTK
Sbjct: 110 FQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKAAGYKFHDTTK 166
>ref|NP_958543.1| hypothetical protein Ljo_1428 [Lactobacillus prophage Lj928]
ref|NP_965230.1| Lj928 prophage protein [Lactobacillus johnsonii NCC 533]
gb|AAR27384.1| putative protein [Lactobacillus johnsonii prophage Lj928]
gb|AAS09196.1| Lj928 prophage protein [Lactobacillus johnsonii NCC 533]
Length = 189
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALE--Y 63
+A G +L+F+L K+ + AT+LA +T H + ++ V +TKDG + + G +
Sbjct: 3 KALSGTRKVLMFKLAKDRDKKNATRLALETTHTIKEAGKVATTETKDGTVNNPGEITTTI 62
Query: 64 DFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTN 123
D +A LA L A ++ ELV+ W+I+ ++ S +
Sbjct: 63 DIEA---LASDSPTYRLLHYAAKHSELVDCWEINFDKPSPDS------------------ 101
Query: 124 RGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFK 183
GKYLA Y GY+SS+ +N I+ ++G G+AT++D A F+
Sbjct: 102 --KGKYLAQYGSGYLSSWETPDKVGDNETIKTTLNVDGKLVSGYATVSDEDVATANNFFR 159
Query: 184 DTT 186
DTT
Sbjct: 160 DTT 162
>ref|YP_950595.1| major tail protein [Streptococcus phage SMP]
gb|ABK91926.1| major tail protein [Streptococcus suis phage SMP]
Length = 180
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 5 LEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYD 64
+E QG ++ FR + + + A K+ FQ EH + ++V+ TKDG++ S+ E
Sbjct: 1 MELIQGKDLVVFFRRVIDQKKQDAGKVRFQVEHTINSEKEVETTITKDGVVNSITDGETS 60
Query: 65 FKATSILAKGDVLAAKLEKAMENGEL----VEIWDIDLEETSKNGDSDNKLANVWGIDKN 120
TS+ + +V + M L VE+W +DL
Sbjct: 61 GDFTSLAYRENVDTVNMWHEMRKWYLAKDKVEVWQVDL---------------------- 98
Query: 121 GTNR---GNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAA 177
G+ R G Y YYQGY +F +++ +E+ E ++G G + +LT QKAA
Sbjct: 99 GSKRQHEGKEVYDVDYYQGYFKNFEISAPSDDKVELSYEMTMDGNGVQAVDSLTATQKAA 158
Query: 178 VQYA 181
V+ A
Sbjct: 159 VEAA 162
>ref|YP_239499.1| ORF022 [Staphylococcus phage 187]
gb|AAX90700.1| ORF022 [Bacteriophage 187]
Length = 217
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 14 ILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAK 73
+ LFR+ + A K+ F TE+ V D + + T D + G+LE AT+ +
Sbjct: 10 LFLFRIAGQKVD--AKKMMFLTEYSVSLEADSENEDTMDDSYSTGGSLENTISATAKMDY 67
Query: 74 GDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGKYLATY 133
D A ++E A+ +G + E W+I+ + V G KN GK+ A Y
Sbjct: 68 RDSFADEVEDAVRDGIIYEAWEIE--------------SKVQGKGKN-----EGKFKAKY 108
Query: 134 YQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQ---YAFKDTTK 187
YQG F +K + E E EF + G Q+GFAT+ + K ++ Y F +TTK
Sbjct: 109 YQGKFKKFESKGEVKGVDEYETEFNVFGKYQRGFATIPETIKTKLELAGYRFHNTTK 165
>ref|ZP_01273336.1| Phage major tail 2 [Lactobacillus reuteri 100-23]
gb|EAS89568.1| Phage major tail 2 [Lactobacillus reuteri 100-23]
Length = 195
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 9 QGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKAT 68
+G +++L RLL+ A E A + +QT RD D TK G + + +E D +
Sbjct: 8 EGKNAVLFERLLENAKKEPAQLIPYQTSLSYDPKRDTDSTTTKMGNVPTASNIETDLEVE 67
Query: 69 SILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRGNGK 128
+ A A + ++ + +E+W + L+ R +GK
Sbjct: 68 FLNAISKA-ADDIYDSLYFNKKIEVWKVHLDRV----------------------RSDGK 104
Query: 129 YLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDTTK 187
A Y +G +S S +A+++ + F I+GV ++G+ L K + Y F+D K
Sbjct: 105 VYAEYMRGIVSEDSNDNDADDHSTRDATFTIDGVAKRGWTALPADIKEEIDYVFRDLAK 163
>ref|YP_804296.1| hypothetical protein PEPE_0793 [Pediococcus pentosaceus ATCC 25745]
gb|ABJ67854.1| hypothetical protein PEPE_0793 [Pediococcus pentosaceus ATCC 25745]
Length = 194
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 6 EAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDF 65
E QG + + +RL K A A + +QT ++ RD D KTKDG + + +LE +
Sbjct: 4 EVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPEL 63
Query: 66 KATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKNGTNRG 125
+ + + A + +++ N E E W +D++ +K
Sbjct: 64 EV-EFINNSSIAADEFYQSVLNNEEGEAWLVDIDRLNK---------------------- 100
Query: 126 NGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQYAFKDT 185
GK A Y Q +S + + E + FA++G ++G+ LT Q+ V Y F+ T
Sbjct: 101 AGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGT 160
Query: 186 TK 187
K
Sbjct: 161 DK 162
>ref|YP_807120.1| hypothetical protein LSEI_1920 [Lactobacillus casei ATCC 334]
gb|ABD83370.1| phage major tail protein [Lactobacillus casei ATCC 334]
gb|ABJ70678.1| hypothetical protein LSEI_1920 [Lactobacillus casei ATCC 334]
Length = 210
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 1 METQLEAKQGIHSILLFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGA 60
M +L+ +G+ + L R + ++ + + +QT S D D TKDG + + +
Sbjct: 1 MANELKVLEGMDVVALARKHSDQATVSGQVIPWQTSLSFDPSVDSDSTVTKDGNVATRSS 60
Query: 61 LEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDSDNKLANVWGIDKN 120
D + L +A + ++ +GEL++ W L KN
Sbjct: 61 ASTDLEV-EFLNNTAAIADVMYDSLFDGELLDFW--ILYRKRKN---------------- 101
Query: 121 GTNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGFATLTDAQKAAVQY 180
GKY A Y Q + S+ + +++ ++ F++NG ++G+ TL D + V Y
Sbjct: 102 ----SAGKYYAWYMQVTVQEDSSDNDPDDHSTRDVTFSVNGTPKRGWTTLDDETQEQVDY 157
Query: 181 AF 182
F
Sbjct: 158 VF 159
>ref|NP_690680.1| hypothetical protein SPP1p029 [Bacillus phage SPP1]
emb|CAA66550.1| unnamed protein product [Bacillus phage SPP1]
Length = 177
Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 16 LFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAKGD 75
LF+ + A+ A A+QT+ V R++ ++TK+G I G++ + T +GD
Sbjct: 14 LFQSIDAATGSAPLFPAYQTDGSVSGERELFDEQTKNGRILGPGSVADSGEVTYYGKRGD 73
Query: 76 VLAAKLEKAMENGELVEIWDID 97
+E A +NG+ ++ W +D
Sbjct: 74 AGQKAIEDAYQNGKQIKFWRVD 95
>ref|YP_710298.1| hypothetical protein SPP1p107 [Bacillus phage SPP1]
emb|CAL18685.1| unnamed protein product [Bacillus phage SPP1]
Length = 264
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 16 LFRLLKEASSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAKGD 75
LF+ + A+ A A+QT+ V R++ ++TK+G I G++ + T +GD
Sbjct: 14 LFQSIDAATGSAPLFPAYQTDGSVSGERELFDEQTKNGRILGPGSVADSGEVTYYGKRGD 73
Query: 76 VLAAKLEKAMENGELVEIWDID 97
+E A +NG+ ++ W +D
Sbjct: 74 AGQKAIEDAYQNGKQIKFWRVD 95
>ref|XP_001018517.1| hypothetical protein TTHERM_00346700 [Tetrahymena thermophila
SB210]
gb|EAR98272.1| hypothetical protein TTHERM_00346700 [Tetrahymena thermophila
SB210]
Length = 2234
Score = 35.4 bits (80), Expect = 1.8, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 53 GIIQSVGALEYDFKATS-----ILAKGDVLAAKLEKAMENGELVEIWDIDLEETSKNGDS 107
GIIQ++G E+D + +L ++L AKL + + + +L +
Sbjct: 693 GIIQAIGEFEFDVSRQANTFRNLLVANNILNAKL--TLTKDQKYAVLGDNLGTVATKLIQ 750
Query: 108 DNKLANVWGIDKNGTNRGNGKYLATYYQGYI-SSFSAKKNAEENIEIEMEFAINGVGQKG 166
+ ++++ +D+ N+GN +++ YQ YI F KN+ E +I IN + +
Sbjct: 751 LDYYSSIYQLDQQSINKGN--FISKVYQSYILGVFLIIKNSVEIYDINTNLFINSINSQN 808
Query: 167 F 167
+
Sbjct: 809 Y 809
>ref|ZP_01815932.1| RTX (repeat in toxin) cytotoxin [Vibrionales bacterium SWAT-3]
gb|EDK26664.1| RTX (repeat in toxin) cytotoxin [Vibrionales bacterium SWAT-3]
Length = 5428
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 24 SSEAATKLAFQTEHEVGKSRDVDGQKTKDGIIQSVGALEYDFKATSILAKGDVLAAKLE- 82
S + AT+LA + VG D+ G+ + ++ +G DF+ T + AKG L LE
Sbjct: 1980 SGQTATELANKALSAVGYFGDLYGRNMRPRHVEVIGGAGADFRKTDVFAKG--LHGALEG 2037
Query: 83 KAMENGELVEIWDIDLEETSKNGDSDNK-LANVWGIDKNGTNRGNGKYLATYYQGYISSF 141
K + V ++ T +N D N+ LA++ G DK +RG+ L T SF
Sbjct: 2038 KGLTPEVTVRSGNV---STPENRDPINQLLADISG-DKVTVSRGDKNQLLT-------SF 2086
Query: 142 SAKKNAEENIEIE 154
S++ + +I+I+
Sbjct: 2087 SSQALLDADIQID 2099
>ref|NP_966604.1| hypothetical protein WD0854 [Wolbachia endosymbiont of Drosophila
melanogaster]
gb|AAS14538.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 1242
Score = 33.1 bits (74), Expect = 9.0, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 59 GALEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDID-LEETSKNGDSDNKLANVWGI 117
G L+Y + A K + EN D+D LEE K+ +G+
Sbjct: 902 GVLKYAIDVPRKFVGATIEATKFATSPEN-------DVDKLEE---------KIYRAFGV 945
Query: 118 DKNG-TNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGF 167
DK T+R GKYL YY+GY+ S E+ ++ E ++ +G+ G+
Sbjct: 946 DKEDITHRRIGKYL-DYYKGYVGSHLG-YTIEDAMKFTWEHGLDSIGKHGY 994
>ref|ZP_01315145.1| hypothetical protein Wendoof_01000008 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 1141
Score = 33.1 bits (74), Expect = 9.7, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 59 GALEYDFKATSILAKGDVLAAKLEKAMENGELVEIWDID-LEETSKNGDSDNKLANVWGI 117
G L+Y + A K + EN D+D LEE K+ +G+
Sbjct: 801 GVLKYAIDVPRKFVGATIEATKFATSPEN-------DVDKLEE---------KIYRAFGV 844
Query: 118 DKNG-TNRGNGKYLATYYQGYISSFSAKKNAEENIEIEMEFAINGVGQKGF 167
DK T+R GKYL YY+GY+ S E+ ++ E ++ +G+ G+
Sbjct: 845 DKEDITHRRIGKYL-DYYKGYVGSHLG-YTIEDAMKFTWEHGLDSIGKHGY 893
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.310 0.128 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 742,895,125
Number of extensions: 29979761
Number of successful extensions: 61735
Number of sequences better than 10.0: 64
Number of HSP's gapped: 62878
Number of HSP's successfully gapped: 64
Length of query: 188
Length of database: 2,222,278,849
Length adjustment: 126
Effective length of query: 62
Effective length of database: 1,401,375,745
Effective search space: 86885296190
Effective search space used: 86885296190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 74 (33.1 bits)