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BUILD 129
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SNP linked to Gene ADPGK(geneID:83440) Via Contig Annotation
rs# on all gene models to Batch Query
all rs# to file.

  Gene Model (mRNA alignment) information from genome sequence back to top
Total gene model (contig mRNA transcript): 3
mrnatranscriptproteinmrna orientationContigContig LabelList SNP
NM_031284.3minus strandNP_112574.3reverseNT_010194.16reference<- currently shown
NM_031284.3minus strandNP_112574.3reverseNW_925884.1CeleraView snp on GeneModel
NM_031284.3plus strandNP_112574.3forwardNW_001838218.2HuRefView snp on GeneModel

Include clinically associated in gene region cSNP has frequency double hit

gene model
(contig mRNA transcript):
Contig LabelContigmrnaproteinmrna orientationtranscriptsnp count
referenceNT_010194.16NM_031284.3NP_112574.3reverseminus strand4, coding

Color Legend

Region Contig
position
mRNA
pos
dbSNP rs#
cluster id
Hetero-
zygosity
Validation 3D Clinically
Associated
Function dbSNP
allele
Protein
residue
Codon
pos
Amino acid
pos
PubMed
exon_7438351811339 rs34149613 0.188byFreq missenseTLeu [L]2437
contig referenceCSer [S]2437
exon_443843158580 rs8024644 N.D.byClusterwith2hit missenseGArg [R]2184
contig referenceALys [K]2184
43843163575 rs8023358 0.331byClusterbyFreqwith2hitwithHapMapFreqYessynonymousCGly [G]3182
contig referenceTGly [G]3182
exon_243857552467 rs11634630 0.074byClusterbyFreqwithHapMapFreqYessynonymousGAla [A]3146
contig referenceAAla [A]3146
exon_14386635030start codon1

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Revised: May 25, 2006 1:38 PM .