Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss960373	KWOK|OVLP-000804-456745		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	09/01/00	10/10/03	86	Genomic			99 %
ss960907	KWOK|OVLP-000804-460109		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	09/01/00	10/10/03	86	Genomic			99 %
ss1886809	KWOK|OVLP-000925-264512		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	10/06/00	10/25/06	87	Genomic			99 %
ss1887191	KWOK|OVLP-000925-272939		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	10/06/00	10/10/03	87	Genomic			99 %
ss1887749	KWOK|OVLP-000925-277971		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	10/06/00	10/10/03	87	Genomic			99 %
ss2606913	SC_JCM|AL162427.6_68942		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	11/03/00	10/10/03	89	Genomic			unknown
ss3385998	TSC-CSHL|TSC1674555		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	09/20/01	10/10/03	100	Genomic			unknown
ss6538741	WI_SSAHASNP|NT_008470.13_3798995		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	02/12/03	10/10/03	111	Genomic			unknown
ss12935514	SC_SNP|NT_008470.15_3801243		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	10/21/03	10/31/03	119	Genomic			unknown
ss22879968	SSAHASNP|WGSA-200403-chr9.chr9.NT_008470.16_3636352		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	03/21/04	03/22/04	123	Genomic			unknown
ss43489389	ABI|hCV3262363		rev/T	A/G	gactcagggagcacatgggacccagcatgc	ttctcccccttgagcaatgctgttgcgtgg	07/18/05	07/18/05	126	Genomic			unknown
ss75212515	ILLUMINA|ILMN_Human_1M_rs701376		fwd/B	C/T	ccacgcaacagcattgctcaagggggagaa	gcatgctgggtcccatgtgctccctgagtc	08/28/07	08/29/07	129	Genomic			unknown

Fasta sequence   (Legend)

 TAAAAACTTA TACCTAGTTG GTGGTATGAG TCATCAGAGA AAGGCATAAG CCAACTAGAA
 TAGTTCCTAA ATGCAGTTTT AATCTTGTTT GCAATTATTT TGAAGGGGTA AGACCATCTG
 GATGAGTCCT AATCATCCAA GAGaaaatat attattattt aataGAAACT TGGTCAGCTG
 AGGCAGCTTA GGGACATAAG CCTGGGAAAA AGAGACCTAG Gggaaggctt caaaatggct
 gactagaggc atttgaatag agcatccaag agaacactag aattcaacag agaagtgaca
 ggaaacagtt gaggcatgga aggagaggga aattaggcaa ctggctcagc caggattggc
 taggtgccca gagaggctag tgtggggaaa gggagagatc cccagtgaga gatccccagt
 ggtccacatt cccactacag acttgcaacc ctagccatgg gacagcccct ggatcttcat
 gggcccagag acctaacata gggagctgcc tagagaccac gcaacagcat tgctcaaggg
 ggagaa
 Y
 gcatgctggg tcccatgtgc tccctgagtc ctaagcagct atagcatggc accgttttgc
 aagcccagcc cacaccagac tgcattctac cctggggcaa aatggcccct gcatctccac
 atgcctggag cgctactgat ataccccCAT GTACACCCAG AGGTCTACAG GAGCACAATA
 CCAAATGGAC CCAGCAGAAT ACCAGGGTTC CCAGCATTCT AACACACACA GTGTCCTACA
 CCCTGGGGAA TGAGTGGTGC AGTGGACCAG GGAAGCTACC CCTGGGACAA AGGGAATCAA
 AAATGCATGT TCCCTGAGGC CTGATAACTG CCTACCTGGG AGAGCTacca caagcagcaa
 ctcaactgcc cccagcagag gagctgctgt gcacatgccc tgaggacagg ctctgccact
 gtccactgca gccactgctg ctgccactgg gaaaccaaag catatgccac tggcagtgac
 tccacctgcc aacagcaggg ccactgctac atagttgcat gtgccctaag gacaggctcc
 cccaaccatt gctgctgctg cagccaccag aacattccac caggggtctg gggagcaccc
 tgccctgccc aacacagcca gcacctgagg acaccaccag gaggcctgaa gacaggcctg
 cctggcctgg tacaaccccc acctgccatg ctcaagcaca ctacctgggg gtatggggat
 tgccctgcct cattcaccac cactggcatc tgtggactcc tcccaggcac ctatggatgg
 gtctacccag ccgtccccta ctacctcagc agctccccta ctacctcagc ggctctccca
 cccccacatg caccacctcc caagcctgtt gcagccaccg ctaacaccaa catatgctgt
 ttcagagtcc aagtgttgtg tcaccactgc tactgccatt gcctatgcca catacattat
 ccaggggttc atagactcag ccacacaccc agcctaccac tgtcactgcc agcactatag
 caagggactc ctggcggtcc aagaatcggc acgtttggac ccccaatgct ggtgttcaca
 tacatctgga ggcccacgga aagacacact tggctcgcaa ctggggcata aggactgata
 acctggcatc cccatcctca gtaaaacctc accacagcct ccactaacaa ctacagccta
 agtcactgag gaaatcacag acaccaccaa tgctttttac actagaagaa atcatatgga
 gactacacta ctgcatgcac ccagaagcaa agctaaagtg ctctacccaa caccatagat
 acatctttag gaaagagtct ctccctatca aaaccaatcc aaaaaaatgg aagaagttac
 tgttaaaata gatgcacaga tgtcaaagta aggacacaag aaacaagaaa aagcaaggac
 gtatgacacc tccagaaaaa accagtaatt ttccagtaat agattccaat gaaaaacaaa
 tttataaaat gctgaaaaaa gaattcaaaa taataatatg aatgaagctc agtgagatac
 aagagaacac attaacaatt acttaattgt attgagatta acaatacagt gaaattttaa
 aaattcagga tatgaataag aaattcacca gagatataga tagcttaaaa aagaaaccaa
 agagaaatcc aggaactaaa gaatttaagg aatgaaattt aaaagaatac acttgagagc
 ttcaacagta gactagatca agcagaagaa agaatttcag aacttgaaga caggtctttt
 gaaacaagcc agaaaaaaaa aagagagaga gagagagaaa gaaaggggaa ggggaaggga
 gacagaaaag caacagaaaa ggagaagtat gaaaaaagaa gaaaaaagtg agcaaatatc
 tgaactgtgg gtgttccaga agatgaagag aagaccaaag ttatagaaaa cctatttaat
 gaaataaaag ttgaaaactt cccaagtgta ccaagtgtac atccagatac aggatacagg
 aagctcagag atcctcaaat agatgtaact ccacaagttt tctccacagc acattctagt
 caagctgtca aaagtcaatg acaaagagag aattctaaaa acagccagag aaaagtcaca
 tataaaggaa cccccatcag acagccaatt tttcagcaga aaccctacag gccaggaaaa
 aatgggatga tacattcaaa gggctgaaag aaagaaaaga aaactggcag ccaagactac
 tctaccaagc gaagctgtcc ttcataaatg aaggagaaac aaagtctttc ccagacaagc
 aaaaactaga ccagccctac aagaagtgcc taagggagtt ctacacctgg aagcaaaagg
 gtgattatct actatcatga aaaaacacaa aactatcaaa ctcattggta aagcaaacaa
 acgaggaaga gaagggactc aaatgttatc actacggaaa atcaccaaac tgcaatgata
 aacaagaaag aaagaaagat aggaacaaaa attatataga acaacaagaa aacagttaac
 aaaatgacag aagtaagtcc tcacatatca ataacactct tgaatgtaaa cagatgaaat
 ttttcactta agagtggaaa aaactgacgg aacgggtttt tttttttttt ttaatgaccc
 aactatatgc tacctataag aaattcactt cacctgtaaa agacatgcag actaaaagta
 aagggatgga aaaagatatt ccattctaat ggaaagtaca acaggcaaaa gtagctgcat
 ttgtgtcata taaaatagat ttcaagtcaa aaacAGGGTG ATATATCCAG GTAGTTGTGG
 TGATGCTGGC CAAATAGTGC TTGGCAGGTG AGAATGTAAA CCCAGGTTCA AGTGAAGTAA
 TAACAGCTTG AATG

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail			Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/T	HWP	C	T
ss1886809	HapMap-HCB	Asian	90	IG	0.844	0.156	0.584	0.922	0.078
	HapMap-JPT	Asian	88	IG	0.886	0.114	0.752	0.943	0.057
	HapMap-YRI	Sub-Saharan African	120	IG	1.000			1.000

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN