BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG0803
(383 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22536967|ref|NP_687818.1| major facilitator family protein [S... 549 e-155
gi|25010877|ref|NP_735272.1| Unknown [Streptococcus agalactiae N... 546 e-154
gi|22993400|ref|ZP_00038000.1| hypothetical protein [Enterococcu... 151 1e-35
gi|23038353|ref|ZP_00070513.1| hypothetical protein [Oenococcus ... 142 9e-33
gi|23002823|ref|ZP_00046496.1| hypothetical protein [Lactobacill... 132 1e-29
gi|23025035|ref|ZP_00064216.1| hypothetical protein [Leuconostoc... 125 9e-28
gi|23024125|ref|ZP_00063347.1| hypothetical protein [Leuconostoc... 121 2e-26
gi|15901440|ref|NP_346044.1| hypothetical protein [Streptococcus... 114 3e-24
gi|23038349|ref|ZP_00070509.1| hypothetical protein [Oenococcus ... 113 5e-24
gi|23036878|ref|ZP_00069098.1| hypothetical protein [Oenococcus ... 106 5e-22
gi|25011920|ref|NP_736315.1| Unknown [Streptococcus agalactiae N... 91 3e-17
gi|19421893|gb|AAL87781.1|AF403184_6 unknown [Desulfitobacterium... 91 5e-17
gi|22538030|ref|NP_688881.1| membrane protein, putative [Strepto... 89 2e-16
gi|23114217|ref|ZP_00099533.1| hypothetical protein [Desulfitoba... 85 2e-15
gi|24379815|ref|NP_721770.1| conserved hypothetical protein [Str... 82 1e-14
gi|23114413|ref|ZP_00099716.1| hypothetical protein [Desulfitoba... 81 3e-14
gi|24378662|ref|NP_720617.1| conserved hypothetical protein [Str... 75 2e-12
gi|23117153|ref|ZP_00101348.1| hypothetical protein [Desulfitoba... 70 5e-11
gi|28377303|ref|NP_784195.1| transport protein [Lactobacillus pl... 64 3e-09
gi|20089079|ref|NP_615154.1| multidrug-efflux transporter [Metha... 64 6e-09
gi|21227964|ref|NP_633886.1| Transporter [Methanosarcina mazei G... 60 4e-08
gi|23115038|ref|ZP_00100313.1| hypothetical protein [Desulfitoba... 60 5e-08
gi|29347978|ref|NP_811481.1| putative sugar transporter [Bactero... 60 6e-08
gi|23474954|ref|ZP_00130245.1| hypothetical protein [Desulfovibr... 55 2e-06
gi|23113325|ref|ZP_00098711.1| hypothetical protein [Desulfitoba... 53 7e-06
gi|15889635|ref|NP_355316.1| AGR_C_4286p [Agrobacterium tumefaci... 53 8e-06
gi|30023448|ref|NP_835079.1| Transporter, MFS superfamily [Bacil... 52 2e-05
gi|30265438|ref|NP_847815.1| major facilitator family transporte... 51 3e-05
gi|22406137|ref|ZP_00000992.1| hypothetical protein [Ferroplasma... 50 9e-05
>gi|22536967|ref|NP_687818.1| major facilitator family protein
[Streptococcus agalactiae 2603V/R]
gi|22533821|gb|AAM99690.1|AE014228_11 major facilitator family
protein [Streptococcus agalactiae 2603V/R]
Length = 383
Score = 549 bits (1414), Expect = e-155
Identities = 382/383 (99%), Positives = 383/383 (99%)
Query: 1 LNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
+NSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI
Sbjct: 1 MNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
Query: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI
Sbjct: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
Query: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW
Sbjct: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
Query: 181 KNVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSS 240
KNVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSS
Sbjct: 181 KNVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSS 240
Query: 241 NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG
Sbjct: 241 NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
Query: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP 360
ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP
Sbjct: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP 360
Query: 361 FLITSGLMVINVFVYLVLMSKNK 383
FLITSGLMVINVFVYLVLMSKNK
Sbjct: 361 FLITSGLMVINVFVYLVLMSKNK 383
>gi|25010877|ref|NP_735272.1| Unknown [Streptococcus agalactiae
NEM316]
gi|23095256|emb|CAD46466.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 383
Score = 546 bits (1407), Expect = e-154
Identities = 379/383 (98%), Positives = 382/383 (98%)
Query: 1 LNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
+NSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI
Sbjct: 1 MNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
Query: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
FVILSNFVVTKLGKKNTVLLGLCLIL+SGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI
Sbjct: 61 FVILSNFVVTKLGKKNTVLLGLCLILISGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
Query: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW
Sbjct: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
Query: 181 KNVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSS 240
KNVPEVENQTHTLKASTTFDTKAALLM ITFLVGIAYIGATVKIPTLLVTKYHYATSFSS
Sbjct: 181 KNVPEVENQTHTLKASTTFDTKAALLMFITFLVGIAYIGATVKIPTLLVTKYHYATSFSS 240
Query: 241 NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
NMLTLLAFSGILVGS+FGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG
Sbjct: 241 NMLTLLAFSGILVGSIFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
Query: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP 360
ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP
Sbjct: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP 360
Query: 361 FLITSGLMVINVFVYLVLMSKNK 383
FLITSGLMVINVFVYLVLMSKNK
Sbjct: 361 FLITSGLMVINVFVYLVLMSKNK 383
>gi|22993400|ref|ZP_00038000.1| hypothetical protein [Enterococcus
faecium]
Length = 404
Score = 151 bits (382), Expect = 1e-35
Identities = 121/350 (34%), Positives = 192/350 (54%), Gaps = 14/350 (4%)
Query: 1 LNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
L +K +K ++LS+S+ L S A+ AIP + A Y T++ L++VE L T P+ M+TI
Sbjct: 2 LMNKKMMKFSLLSVSLILTSAGAVTSAIPSMSATYATRS----LSAVELLTTAPSFMVTI 57
Query: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
FV++S+F+ K+G+K TV++GL + + G + F+ ++S+ +ASR LGIG GL NSL++
Sbjct: 58 FVLISSFIARKIGQKQTVIIGLVIASIYGILPLFSQSYSIVLASRAGLGIGFGLINSLAV 117
Query: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
S+I Y DERASMIG ++A G AL TF+ G ++ G Y +LVY + +P+ F
Sbjct: 118 SMIAAFYHGDERASMIGFQSAFQGFGAALMTFVAGQLVQFGWQYTFLVYAISLPILVLFV 177
Query: 181 KNVPEVENQTHTLKASTTFDTKAALLM--------LITFLVGIAYIGATVKIPTLLVTKY 232
VP E T L++ T T+ + + LV + Y ++K+ T+L T
Sbjct: 178 LFVPTPE--TTELQSHGTAPTRQVIKTNPKMISYGIFLLLVIVVYNAVSIKLATVLTTYS 235
Query: 233 HYATSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIF 292
+ ++N+LT++ + + G FG L L + +L MGIG VL A N +
Sbjct: 236 LGNETNAANILTIMQLASMAAGVCFGWLQTKAHRYMLTLSLLLMGIGFVLIATVINLYVI 295
Query: 293 IVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTP 342
+IL G SF + +F +S K +F TS+ L N+G + P
Sbjct: 296 GFGAILTGISFSLFIPYLFNQVSIQAPKYAESFNTSILLVGANLGTFIAP 345
>gi|23038353|ref|ZP_00070513.1| hypothetical protein [Oenococcus
oeni MCW]
Length = 403
Score = 142 bits (358), Expect = 9e-33
Identities = 111/352 (31%), Positives = 191/352 (53%), Gaps = 15/352 (4%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
KL+ILSIS+ M AI+ A+P +Y + + +VE+LVT+P I +F+ LS F
Sbjct: 13 KLSILSISLMTMIAPAISSALPLMYGSFKGETE----TAVETLVTVPNFGIIVFLFLSPF 68
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
V+ +G KNTV+ GL L L++G I F+++++L SR LLG GIGL+NS+ +S+I Y
Sbjct: 69 VIKLIGGKNTVIFGLLLALVAGIIPVFSNDYALVFVSRFLLGSGIGLFNSMCVSLIARFY 128
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFF-------- 179
+ DE ++M+G + A+ ++G AL F+V ++ +G + +L+YL+ +P+ F
Sbjct: 129 KGDELSTMMGFQGATGSLGGALGAFLVNWLVTLGWHQTFLIYLIALPIMALFIFCIPRQL 188
Query: 180 ---WKNVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYAT 236
K+V Q + T + L ++ FLV ++ + +++P L+ K +
Sbjct: 189 LNEGKSVSSSGKQVSSNSGKQTINLPVWGLSVLIFLVFAFFLASQLQLPALVTAKRIGSL 248
Query: 237 SFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVAS 296
S S + + GI +G+V+GK+ K + TL L +G L A ++ +I + +
Sbjct: 249 SQVSVLNGITTLFGIPIGAVYGKVSKFLKNLTLSAGFLFAALGFSLIAFGSDLLIVGLGA 308
Query: 297 ILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKL 348
I+ G F + S++ +++K K N +++ L NIGV P IL L
Sbjct: 309 IVSGVGFGLMVPSIYVWMAKVAPKNSENLASTVLLVTTNIGVFACPTILNFL 360
>gi|23002823|ref|ZP_00046496.1| hypothetical protein [Lactobacillus
gasseri]
Length = 401
Score = 132 bits (332), Expect = 1e-29
Identities = 107/346 (30%), Positives = 186/346 (52%), Gaps = 12/346 (3%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
K+++LSISIFLM AIAPA+P +Y + P I A VE L TIP + I I +++S F
Sbjct: 20 KISLLSISIFLMMAPAIAPALPLMYHAF----PGIDKAGVEMLSTIPNIGIVIGLLISPF 75
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
++ +G+K T + GL + L++G + + ++ + SR L+G GIGL+NSL++S+I Y
Sbjct: 76 LIKLMGEKPTTITGLVITLLAGTFPMYATAYTPILISRFLIGAGIGLFNSLAVSLIPQFY 135
Query: 128 EADER--ASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPE 185
++E A+M+G + ++G AL +F++ +L I + + +Y LVIPV F VP
Sbjct: 136 SSNEEKLATMVGYQNVMGSLGAALASFLISWLLTISWHAAFAIYFLVIPVLILFILFVPL 195
Query: 186 VENQT------HTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFS 239
++ K T + K L+ ++ F + + Y+ + KIP L+V + S
Sbjct: 196 PSSRQKKADKAKKAKEKQTINGKVILISVLMFFIFLFYMPMSFKIPALVVQEKLGTVSEV 255
Query: 240 SNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILI 299
S + +L GI VG+ FG K +K + + IG + ALA N I+ + +++
Sbjct: 256 SALTGVLNLVGIPVGASFGFFFKKLHDKIFPLGFALVAIGFFIIALAGNFIMLSIGCLIL 315
Query: 300 GASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLIL 345
G F + ++ ++ + N T++ L N+G ++P+I+
Sbjct: 316 GIGFGLGVPYMYNWLDWSAPANSVNLATTIVLVLVNVGCAISPMII 361
>gi|23025035|ref|ZP_00064216.1| hypothetical protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 372
Score = 125 bits (315), Expect = 9e-28
Identities = 99/355 (27%), Positives = 187/355 (51%), Gaps = 4/355 (1%)
Query: 23 AIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNFVVTKLGKKNTVLLGL 82
AI+ A+P++ + P+I ++ ++ + TI + I ++LS F+ KLG K T+ +GL
Sbjct: 7 AISSALPEMAKSF----PNISVSQIDMIATIQQFSVMITLLLSGFISKKLGIKRTITIGL 62
Query: 83 CLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLYEADERASMIGLRTAS 142
L ++G FF+ +F L + SRL++G GIGL+NSL+I+II YE R+ M+G R+A+
Sbjct: 63 ILTGVAGVFPFFSHSFILILISRLIVGCGIGLFNSLAITIIDLFYEDPTRSQMLGFRSAT 122
Query: 143 LNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVENQTHTLKASTTFDTK 202
IG ++ +VGL++ I + +L+YLL P+ FF K VPE + +
Sbjct: 123 EQIGVSILNIVVGLLVLINWHASFLIYLLAFPLLAFFLKVVPEPPIPLGSDNNKQRINLP 182
Query: 203 AALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSSNMLTLLAFSGILVGSVFGKLVK 262
++ ++ + +++P ++VT +++ SS +++ G+++G +FG++ +
Sbjct: 183 VLIMTVLLAFMVACTTAVIIQVPNIIVTDLSKSSAVSSLIISANTLMGMVMGILFGRIYR 242
Query: 263 VFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIGASFVGTMSSVFFYISKNYAKEH 322
++ L + IL M +G+++ ++ + +++ G S+ S +F +S K
Sbjct: 243 FVKKFILPLGILFMALGSLIMVSFHSVFGVTLGAVVCGMSYPLVGSYIFSLVSVIAPKGS 302
Query: 323 NNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTPFLITSGLMVINVFVYLV 377
S L N+G TPL L++L L PFL L++I + L+
Sbjct: 303 ETLANSTLLIGANLGSFSTPLFLSELGKMNSLTTHAGPFLTAFWLLIILTMIVLI 357
>gi|23024125|ref|ZP_00063347.1| hypothetical protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 399
Score = 121 bits (304), Expect = 2e-26
Identities = 103/347 (29%), Positives = 174/347 (49%), Gaps = 10/347 (2%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
KL LSIS+ L S +I+ IPK+ + Q+ +VE+LVT + + IFV+LS F
Sbjct: 12 KLAFLSISLLLTSTASISITIPKMQQTFANQSA----TAVEALVTASNITVMIFVLLSPF 67
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+V G + TVL GL L +SG + F+ N+ L SRL+LG G+G++NSL++S+I D +
Sbjct: 68 IVRVFGTRKTVLTGLFLAGVSGVVPMFSDNYFLVYISRLVLGAGLGMFNSLAVSLINDFW 127
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVE 187
D R M+G ++A ++G+ +TTFI G+++ +Y Y +Y L + F F VP+
Sbjct: 128 SGDTRNKMLGFQSAVQSVGQTVTTFIAGILVNYNWHYSYSIYFLALVSFILFLVYVPDTT 187
Query: 188 NQTHTLKASTTFDTKAALLMLITF-----LVGIAYIGAT-VKIPTLLVTKYHYATSFSSN 241
+ + K ++ + F L+ A + A +K +V + SF
Sbjct: 188 TKDDLVTNEVVEKPKQSINSYVLFSSFGLLISFALLMAVFLKSAGFVVEEKFENASFIGT 247
Query: 242 MLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIGA 301
L++ G L ++G +VK+ ++ T + +GI ++ ALA N + + + G
Sbjct: 248 ALSVYTLVGFLGSLLYGYIVKITKQYTFSLSYAIIGISFLIVALAPNMFVITLGMAIGGI 307
Query: 302 SFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKL 348
+ F I + N S+A+ N+G L+P +L L
Sbjct: 308 GGSVFLPIAFGTILEKAPANSGNLAISIAMVGTNLGTYLSPYLLATL 354
>gi|15901440|ref|NP_346044.1| hypothetical protein [Streptococcus
pneumoniae TIGR4]
gi|15903496|ref|NP_359046.1| Major facilitator superfamily
transporter - efflux? [Streptococcus pneumoniae R6]
gi|25389227|pir||C95186 hypothetical protein SP1600 [imported] -
Streptococcus pneumoniae (strain TIGR4)
gi|25509062|pir||D98053 hypothetical protein MFS transporter
[imported] - Streptococcus pneumoniae (strain R6)
gi|14973091|gb|AAK75684.1| hypothetical protein [Streptococcus
pneumoniae TIGR4]
gi|15459110|gb|AAL00257.1| Major facilitator superfamily
transporter - efflux? [Streptococcus pneumoniae R6]
Length = 383
Score = 114 bits (284), Expect = 3e-24
Identities = 107/383 (27%), Positives = 204/383 (52%), Gaps = 16/383 (4%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
+ +IL++S+ L++ +I+ A+P ++ +Y + +E LV++P+ I + ++L+ F
Sbjct: 7 RASILALSLVLITSFSISSALPAMFDYYQGYSKE----QIELLVSLPSFGIMMMLLLNGF 62
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+ ++ + LGL ++ +SG F+ + +RLL G+G+G+ N+ +ISII++ Y
Sbjct: 63 LEKIFPERLQISLGLLILSLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISERY 122
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVY---LLVIPVFFFF---WK 181
+ R M+GLR ++ +G +L T VG +LA G I+L Y LV+P++ F K
Sbjct: 123 QGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAIFLAYSAGFLVLPLYLLFVPYGK 182
Query: 182 NVPEVENQTHTLKASTTFDTKAALLMLI--TFLVGIAYIGATVKIPTLLVTKYHYATSFS 239
+ EV+ + + T + K + L +V T++IP+L+V + S
Sbjct: 183 SKKEVKKRAKE-ASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQLS 241
Query: 240 SNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILI 299
S +L+++ GI+ G F L+ +F+EK LL + G+G ++ AL+++ + + S+L
Sbjct: 242 SFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVLA 301
Query: 300 GASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMT 359
G ++ +++VF +S+ + N TS A+ + G TP +L + H M
Sbjct: 302 GFAYSVVLTTVFQLVSERIPAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTH--NGML 359
Query: 360 PFLITSG-LMVINVFVYLVLMSK 381
F I G L+VI++FV +L +
Sbjct: 360 VFSILGGWLIVISIFVMYLLQKR 382
>gi|23038349|ref|ZP_00070509.1| hypothetical protein [Oenococcus
oeni MCW]
Length = 203
Score = 113 bits (283), Expect = 5e-24
Identities = 73/183 (39%), Positives = 116/183 (62%), Gaps = 4/183 (2%)
Query: 3 SKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFV 62
+ L LKL IL+ S+ + AI+ + + A + +I +VESLVTIP+ + +F+
Sbjct: 6 NNLGLKLGILATSLLISDATAISVTVAPMEATF----SNISATTVESLVTIPSFSMLLFI 61
Query: 63 ILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISI 122
+LSNFV+ +GKK TVLLGL + + G + F ++F + R LLG G+G YN+L++ +
Sbjct: 62 LLSNFVIRLIGKKKTVLLGLSMAFIGGVLPAFVTSFPAIIFCRFLLGAGVGTYNTLAVGL 121
Query: 123 ITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKN 182
I+D + E+ ++G +TA+ IG ALTTF+ G++++ +Y YLVY L IP+ F+ N
Sbjct: 122 ISDFFTGVEQKKLLGFQTATSAIGSALTTFLAGILVSYDWHYAYLVYALSIPILLVFYLN 181
Query: 183 VPE 185
VPE
Sbjct: 182 VPE 184
>gi|23036878|ref|ZP_00069098.1| hypothetical protein [Oenococcus
oeni MCW]
Length = 332
Score = 106 bits (265), Expect = 5e-22
Identities = 98/333 (29%), Positives = 173/333 (51%), Gaps = 28/333 (8%)
Query: 2 NSKLSLK-LTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
NSK SL + ILSIS+ S AI +P + + ++ A VE+LVT+P+ + +
Sbjct: 9 NSKNSLTAIGILSISLITTSTYAINGTLPMIRS-----ELNLAQAQVETLVTVPSFALAL 63
Query: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
V+ S+ + TK+G++ TV +G+ +I ++G I F T N+ L + SR+ LG GIG+ NSL++
Sbjct: 64 LVLFSSLISTKIGERLTVNIGVGIIGLTGIIPFLTENYPLILISRVFLGAGIGMINSLAV 123
Query: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
S+I ++ A+++G R + +G+A TFI GL++ I +LVYL+ IP+ F
Sbjct: 124 SLIASYFKEKTAATLLGFRASIEQVGQAFLTFIAGLLMNISWQAPFLVYLITIPILLMFN 183
Query: 181 KNVPEVENQTHTLKASTTFDTKAA--------------LLMLITFLVGIAYIGATVK--- 223
VP+ + K D++ + LL ++ ++ YIG V+
Sbjct: 184 LFVPKEHKKVGDDKNGKEIDSEQSLDKRENSKISPIVWLLAILMAILVADYIGMQVRFAQ 243
Query: 224 IPTLLVTKYHYATSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLF 283
I T +++K + A+ F S ML + GIL FG+ ++ + K + + I N +
Sbjct: 244 IATNIISKDYNASPFMSVMLIIAMIGGIL----FGRFYQLMKFKLIYFSLALFAISNFIV 299
Query: 284 ALANNQIIFIVASILIGA-SFVGTMSSVFFYIS 315
A ++ + ++ I SF S+ F +++
Sbjct: 300 ANSHKSLPVLIFWIYFNRLSFTTNFSTGFSFVA 332
>gi|25011920|ref|NP_736315.1| Unknown [Streptococcus agalactiae
NEM316]
gi|24413462|emb|CAD47540.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 387
Score = 91.3 bits (225), Expect = 3e-17
Identities = 90/346 (26%), Positives = 184/346 (53%), Gaps = 9/346 (2%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
KL++LS+S+ L+S + +PA+P++ ++Y + + VE L +IP+M I ++++ +
Sbjct: 7 KLSLLSLSLILLSTFSTSPALPQMISYYRDKG--LPSPQVELLFSIPSMAIIFILLITPW 64
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+ KL +K+ ++ GL L + G + + N+ L SRLLLG GIG N+ +IS+I++ Y
Sbjct: 65 LSKKLSEKHMIIFGLLLTALGGGLPVVSQNYLLVFVSRLLLGSGIGFINARAISVISEYY 124
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPE-- 185
+ ER ++GLR + +G A T +VGL+L G + +++Y L +P+ + P+
Sbjct: 125 QGKERRKLLGLRGSFEVLGNAGLTALVGLLLTFGWSKSFMIYFLALPILVLYLVFAPKKV 184
Query: 186 VENQTHTLKASTTFDTKAALLMLITFLVGIAYI-----GATVKIPTLLVTKYHYATSFSS 240
V++ +K KA L ++ + ++ G ++IP L+V + +S
Sbjct: 185 VKDTNDKIKTKGQKIPKADLTYIVALAILAGFVITINTGINLRIPLLVVEFGLGTPAQAS 244
Query: 241 NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
+L+ + GI+ G FG+L+ +F ++ + I ++ + + L +N ++ ++++ G
Sbjct: 245 LVLSAMMLMGIIAGMSFGQLIAMFHKQLIPICLVLFSLTLLGVGLPSNLMVLTISAMASG 304
Query: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILT 346
+ +++VF ++ T+L L NIG ++L+
Sbjct: 305 FLYSLMVTAVFSLVADRVEYSLVGSATTLVLVFCNIGGASAAILLS 350
>gi|19421893|gb|AAL87781.1|AF403184_6 unknown [Desulfitobacterium
hafniense]
Length = 394
Score = 90.5 bits (223), Expect = 5e-17
Identities = 84/351 (23%), Positives = 169/351 (47%), Gaps = 10/351 (2%)
Query: 2 NSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIF 61
NS +LKL I S+S+ +M++ +I+ + L + PH+ V+S++TI A+ I
Sbjct: 5 NSGFTLKLAISSVSLLVMTYSSISVIMADLIKAF----PHVDPTVVQSVLTISALAIVFG 60
Query: 62 VILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSIS 121
+L+ +GK+ +LLG+ L + G F S+F+ M SR +LG GIG+ N ++ +
Sbjct: 61 TLLTGLTAEIVGKRKLLLLGIALYTLGGIGPLFFSSFASLMVSRAVLGAGIGIMNPIATT 120
Query: 122 IITDLYEAD-ERASMIGLRTASLNIGKALTTFIVGLVLAIG---VNYIYLVYLLVIPVFF 177
+I D ++ +RA ++G ++ + +G+ + +G++ G V ++YL LL++ V +
Sbjct: 121 LIGDFFQGGADRAQLVGFKSTAGGLGQTIFPIFMGILAVSGWRNVFWVYLFGLLILAVVY 180
Query: 178 FFWKNVPEVENQTHTLKASTTFDTKAALLM--LITFLVGIAYIGATVKIPTLLVTKYHYA 235
F+ P+++ K + ++ L F +A++ +V
Sbjct: 181 FYIPEPPKLQVNGAKAKVKDFYKINFPVIAICLFVFFAFVAHMAIFTNTAIFMVQSGLGD 240
Query: 236 TSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVA 295
TS ++ + +L+ + + + +F ++F+ I + +G G ++ A A + +A
Sbjct: 241 TSSATVAIAVLSAAHMFMSLIFKYSFQIFKRFVGPIGTVMLGAGLLIMANAQSMTAVSIA 300
Query: 296 SILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILT 346
I +G + + I+ +F SL L N G L+P I+T
Sbjct: 301 MICMGIGAGTYIPYAYDLITNLAPNTSRSFSISLMLICLNFGGFLSPFIMT 351
>gi|22538030|ref|NP_688881.1| membrane protein, putative
[Streptococcus agalactiae 2603V/R]
gi|22534933|gb|AAN00754.1|AE014277_2 membrane protein, putative
[Streptococcus agalactiae 2603V/R]
Length = 358
Score = 88.6 bits (218), Expect = 2e-16
Identities = 79/307 (25%), Positives = 159/307 (51%), Gaps = 7/307 (2%)
Query: 47 VESLVTIPAMMITIFVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRL 106
VE L +IP+M I ++++ ++ KL +K+ ++ GL L + G + + N+ L SRL
Sbjct: 15 VELLFSIPSMAIIFILLITPWLSKKLSEKHMIIFGLLLTALGGGLPVVSQNYLLVFVSRL 74
Query: 107 LLGIGIGLYNSLSISIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIY 166
LLG GIG N+ +IS+I++ Y+ ER ++GLR + +G A T +VGL+L G + +
Sbjct: 75 LLGSGIGFINTRAISVISEYYQGKERRKLLGLRGSFEVLGNAGLTALVGLLLTFGWSKSF 134
Query: 167 LVYLLVIPVFFFFWKNVPE--VENQTHTLKASTTFDTKAALLMLITFLVGIAYI-----G 219
++Y L +P+ + P+ V++ +K KA L ++ + ++ G
Sbjct: 135 MIYFLALPILVLYLVFAPKKVVKDTNDKIKTKGQKIPKADLTYIVALAILAGFVITINTG 194
Query: 220 ATVKIPTLLVTKYHYATSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIG 279
++IP L+V + +S +L+ + GI+ G FG+L+ +F ++ + I ++ +
Sbjct: 195 INLRIPLLVVEFGLGTPAQASLVLSAMMLMGIIAGMSFGQLIAMFHKQLIPICLVLFSLT 254
Query: 280 NVLFALANNQIIFIVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVI 339
+ L +N ++ ++++ G + +++VF ++ T+L L NIG
Sbjct: 255 LLGVGLPSNLMVLTISAMASGFLYSLMVTAVFSLVADRVEYSLVGSATTLVLVFCNIGGA 314
Query: 340 LTPLILT 346
++L+
Sbjct: 315 SAAILLS 321
>gi|23114217|ref|ZP_00099533.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 400
Score = 84.7 bits (208), Expect = 2e-15
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 14/344 (4%)
Query: 9 LTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNFV 68
L I S ++ I PAI + A + P IG +++ + TIP+++ I+ +
Sbjct: 11 LAIFSFGVYRDGRGTITPAIAAIGAAF----PQIGFSTLLLVSTIPSLVSIPVAIIGGSI 66
Query: 69 VTKLGKKNT-VLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
K K T VL + + G I +F ++F+L + SR G+G+GL L+ ++I +L
Sbjct: 67 AGKSVKYRTLVLFAALMFTIGGIIPYFINDFTLILVSRAFFGLGLGLIMPLNTALIFNLI 126
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVE 187
D++A+++G+ +NIG + + G+ ++ NY +L + + F +P E
Sbjct: 127 PPDKQANIMGINGVVMNIGGIVLQLLGGVFASVQWNYSFLAHGFGLITFLLTLFFLP--E 184
Query: 188 NQTHTLKASTTFDTKAALLMLIT-FLVGIAYIGATVKIPTLLVTKYHYATSFSSN----- 241
+ H L A T L M ++ F GIA+ AT+ L + +N
Sbjct: 185 PKKHELPAGTADAPAQKLKMPVSIFGWGIAFGVATILYYPSLTNMSSVLETIGANSAVAG 244
Query: 242 -MLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
+L + G+L G VFGK K F +TL + + VLFA + + +FI+ L+G
Sbjct: 245 IVLMFMTIGGMLAGIVFGKTFKKFGRQTLSFGLFFFVLSQVLFAFSQSVPLFIIGEALMG 304
Query: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLI 344
TM+S+ + S+ +T N+G L+ I
Sbjct: 305 FGLTLTMTSINMMAGASVHPSQTPMAMSIIVTGMNLGGFLSGYI 348
>gi|24379815|ref|NP_721770.1| conserved hypothetical protein
[Streptococcus mutans UA159]
gi|24377784|gb|AAN59076.1|AE014974_6 conserved hypothetical protein
[Streptococcus mutans UA159]
Length = 391
Score = 82.4 bits (202), Expect = 1e-14
Identities = 84/342 (24%), Positives = 159/342 (45%), Gaps = 8/342 (2%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
K+++LS+SI M+ +I+ A L + Q+ A +E + T+P + + ++ ++
Sbjct: 14 KISVLSLSILAMTAPSISIANNLLQKTFTQQST----AEIEMISTLPNFGVLLLILFADT 69
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+ K G K T+ GL + L+ G + F N+ + R L+G GIGL+N S+S++ Y
Sbjct: 70 IANKFGIKRTITAGLLMYLLGGVLPSFIPNYYAIVFLRFLMGCGIGLFNPFSVSLMYRFY 129
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVE 187
+ E + M+G + N+G A F++G ++ G ++ Y + + F V +
Sbjct: 130 KDQELSDMLGFQNTGQNLGNAGFGFLLGALVLAGWKVAFMGYFIALIPLILFGAFVVIPD 189
Query: 188 NQ----THTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSSNML 243
+Q K + + + LL L+ ++ ++ T+K+ + S +S++L
Sbjct: 190 DQPTIKKERPKLADSINGHILLLALLFLIIFGMFMMMTIKMALFGAETGLISASAASSIL 249
Query: 244 TLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIGASF 303
+L S + FGKL K L I + + +G + A A+N + + I+ G F
Sbjct: 250 AVLGLSSMFSAIAFGKLSKRVGNFMLPISLTGIAMGFFIVASASNAAMVVFGVIIAGIFF 309
Query: 304 VGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLIL 345
F ++ KE TS+ L N+G L+P I+
Sbjct: 310 GWVFPQAFLRAAQVGPKEGGTLTTSVILMGINLGAFLSPSIV 351
>gi|23114413|ref|ZP_00099716.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 373
Score = 80.9 bits (198), Expect = 3e-14
Identities = 73/313 (23%), Positives = 148/313 (46%), Gaps = 6/313 (1%)
Query: 40 PHIGLASVESLVTIPAMMITIFVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFS 99
PH+ V+S++TI A+ I +L+ +GK+ +LLG+ L + G F S+F+
Sbjct: 18 PHVDPTVVQSVLTISALAIVFGTLLTGLTAEIVGKRKLLLLGIALYTLGGIGPLFFSSFA 77
Query: 100 LAMASRLLLGIGIGLYNSLSISIITDLYEAD-ERASMIGLRTASLNIGKALTTFIVGLVL 158
M SR +LG GIG+ N ++ ++I D ++ +RA ++G ++ + +G+ + +G++
Sbjct: 78 SLMVSRAVLGAGIGIMNPIATTLIGDFFQGGADRAQLVGFKSTAGGLGQTIFPIFMGILA 137
Query: 159 AIG---VNYIYLVYLLVIPVFFFFWKNVPEVENQTHTLKASTTFDTKAALLM--LITFLV 213
G V ++YL LL++ V +F+ P+++ K + ++ L F
Sbjct: 138 VSGWRNVFWVYLFGLLILAVVYFYIPEPPKLQVNGAKAKVKDFYKINFPVIAICLFVFFA 197
Query: 214 GIAYIGATVKIPTLLVTKYHYATSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMI 273
+A++ +V TS ++ + +L+ + + + +F ++F+ I
Sbjct: 198 FVAHMAIFTNTAIFMVQSGLGDTSSATVAIAVLSAAHMFMSLIFKYSFQIFKRFVGPIGT 257
Query: 274 LAMGIGNVLFALANNQIIFIVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTA 333
+ +G G ++ A A + +A I +G + + I+ +F SL L
Sbjct: 258 VMLGAGLLIMANAQSMTAVSIAMICMGIGAGTYIPYAYDLITNLAPNTSRSFSISLMLIC 317
Query: 334 GNIGVILTPLILT 346
N G L+P I+T
Sbjct: 318 LNFGGFLSPFIMT 330
>gi|24378662|ref|NP_720617.1| conserved hypothetical protein
[Streptococcus mutans UA159]
gi|24376523|gb|AAN57923.1|AE014866_5 conserved hypothetical protein
[Streptococcus mutans UA159]
Length = 394
Score = 74.7 bits (182), Expect = 2e-12
Identities = 96/342 (28%), Positives = 188/342 (54%), Gaps = 15/342 (4%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
K ++LS+S+ L+S A++PA+PK+ +FY T+ A VE L+++ + I ++L+ +
Sbjct: 7 KFSLLSLSLMLVSTFAVSPALPKMLSFYQTRG--YSNAQVELLLSLSSFAILAVLLLNPW 64
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+ L ++ +++LGL L+ + G + F + L SRLLLG+GIGL N+ +IS+I++ +
Sbjct: 65 INLWLSERWSIILGLLLLSIGGSLPVFLQFYPLVFLSRLLLGLGIGLINARAISMISERF 124
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEV- 186
R M+GLR ++ +G A+ TF+ G L + ++ +L+Y + + VP
Sbjct: 125 SGKIRVQMLGLRGSAEVLGSAILTFLAGQWLNVSWSFAFLIYGFGFLILLCYLLFVPAAK 184
Query: 187 ------ENQTHTLKASTTFDTKAAL----LMLITFLVGIAYIGATVKIPTLLVTKYHYAT 236
+ Q ++ + F + L L L V + T++IP L+V K H AT
Sbjct: 185 GKRESSQRQMYSTASKNHFTFRQLLYIFGLALYAGFVILVNSANTLRIP-LVVEKLHLAT 243
Query: 237 -SFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVA 295
S +S +L+L+ GIL G++F L+ +F++ + +++ +G+G ++ AN+ + +
Sbjct: 244 ASQASFILSLMMLMGILAGTLFSFLLALFKDYLMPLVVFVLGLGMLILWQANHLWLLSLG 303
Query: 296 SILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIG 337
+++ G + ++ VF +S++ ++ T+L L N+G
Sbjct: 304 ALVTGFVYSLGVTLVFHLLSEHMPRKQLTTATTLILIGCNLG 345
>gi|23117153|ref|ZP_00101348.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 237
Score = 70.5 bits (171), Expect = 5e-11
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 3 SKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFV 62
SK LK +L++S M + P + + + P I +V + +P++ I F
Sbjct: 2 SKGKLKFGVLAVSAMGMGAMVTNPVLADIMKAF----PDIDPTTVMLISGLPSLFIVFFA 57
Query: 63 ILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISI 122
+ + KK + ++ GF+ F ++F+L +A R LLG+G+G ++ +
Sbjct: 58 PIYGKLTQYFPKKALLAFASLCFVLGGFLPAFMTHFTLILAMRCLLGVGLGFLMPMAADL 117
Query: 123 ITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKN 182
I+D ++ ER +M+G ++A +IG + G + + G NY + YLL + +F
Sbjct: 118 ISDFFDGHERQTMMGFQSAFTSIGGIMYQMAGGFLGSFGWNYAFYAYLLGVIIFLAVHFT 177
Query: 183 VPEVENQT 190
+PE + +T
Sbjct: 178 LPEPQRKT 185
>gi|28377303|ref|NP_784195.1| transport protein [Lactobacillus
plantarum WCFS1]
gi|28270135|emb|CAD63034.1| transport protein [Lactobacillus
plantarum WCFS1]
Length = 384
Score = 64.3 bits (155), Expect = 3e-09
Identities = 92/378 (24%), Positives = 171/378 (44%), Gaps = 12/378 (3%)
Query: 1 LNSKLSLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITI 60
+ +L+ ++ILS+S I IP+L + P + +E LVTI I
Sbjct: 1 MQPRLTTTISILSLSTVTGITTVITGIIPQLKRTF----PTVPTTLIEWLVTIANCSALI 56
Query: 61 FVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSI 120
++ + + ++ G + V+ GL + + G I T+NF++ M SRL LG+G+GL++ +I
Sbjct: 57 TLLFNPRLTSRWGLRPIVISGLLISAIMGLIPAITTNFTVIMVSRLGLGLGVGLFSPHAI 116
Query: 121 SIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFW 180
S++T + D RA ++G +T +G A+ + GL++++ + ++ +Y L++ V
Sbjct: 117 SLLTHSFTGDLRARLLGYQTGLSALGNAILLGLAGLLISLSWHAVFWLYGLLVIVAGGVA 176
Query: 181 KNVPEVENQTHTLKASTTFDTKAA----LLMLITFLVGIAYIGATVKIPTLLVTKYHYAT 236
VPE + T + T T+ L+ +TF+ + G +K+P+ ++
Sbjct: 177 WFVPEPTVPSTTTNHARTEKTQLPRHQWTLLGLTFITYLLIWGVQLKLPSYFSARHFGNA 236
Query: 237 SFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVAS 296
+ + L + G+L G FG L + TL + I ++ LA+N + I A+
Sbjct: 237 ATINLTLAAMNIGGLLAGLTFGYLYRYLHRFTLTLGYAGAAISVLVLWLASNATVAIGAA 296
Query: 297 ILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKL----PSQL 352
+ + T + F + N ++S A I PL+ L P L
Sbjct: 297 VFFNFIYSYTGPYLVFTSNTGLDTIQVNVLSSYLTIATIISAFFAPLVWNSLGQLGPQTL 356
Query: 353 HLEPFMTPFLITSGLMVI 370
+ LI GL +I
Sbjct: 357 TANVLIWIMLILGGLALI 374
>gi|20089079|ref|NP_615154.1| multidrug-efflux transporter
[Methanosarcina acetivorans str. C2A]
gi|19913940|gb|AAM03634.1| multidrug-efflux transporter
[Methanosarcina acetivorans str. C2A]
Length = 410
Score = 63.5 bits (153), Expect = 6e-09
Identities = 79/344 (22%), Positives = 151/344 (42%), Gaps = 21/344 (6%)
Query: 24 IAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNFVVTKLGKKNTVLLGLC 83
+AP +P + +T + +GL L++ A+ IF ++ + ++ +K ++ L
Sbjct: 34 LAPVLPDMVEPLNTTSHEVGL-----LISTYAISTAIFALVIGHFIDRVNRKKILVPCLV 88
Query: 84 LILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLYEADERASMIGLRTASL 143
+ ++G +S+FTS+ + R + GIG+ SL + +I D+Y+ + + + +L
Sbjct: 89 IYGLTGLVSYFTSDLHSLLILRFIQGIGVAGMMSLPMLVIADVYKDHKSLYAMNKVSMAL 148
Query: 144 NIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVENQTHTLKASTTFDTKA 203
IG I G + +G NY +L Y+L +P+ F +PE Q + D
Sbjct: 149 AIGSVSAPLIGGGLANLGWNYPFLFYVLSLPLAFVVMFFLPETRVQRDNVSHKGILDGFT 208
Query: 204 AL-------LMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSSNMLTLLAFSGILVGSV 256
AL + ++F V +P +L Y S +LAF GI + +
Sbjct: 209 ALKEMRILYTVFLSFAVFFILYSVLTYVPFMLKNVLSYTAKESG---LILAFQGIAIILM 265
Query: 257 FGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASI-----LIGASFVGTMSSVF 311
+ VK K I+I+A+G A+ + + + ++ L GA F + +++
Sbjct: 266 VPR-VKTLASKHSTILIIAIGFALDGLAIFSISFAYSIVTVLLLILLFGAGFGLSQTAID 324
Query: 312 FYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLE 355
I + E + S+ T IG L+P++L + + LE
Sbjct: 325 AQIVQIAPSESKGGVLSIHNTMKYIGQSLSPILLGVVLAHFDLE 368
>gi|21227964|ref|NP_633886.1| Transporter [Methanosarcina mazei
Goe1]
gi|20906388|gb|AAM31558.1| Transporter [Methanosarcina mazei Goe1]
Length = 402
Score = 60.5 bits (145), Expect = 4e-08
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 21/334 (6%)
Query: 24 IAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNFVVTKLGKKNTVLLGLC 83
+ P +P + T + +GL L++ A+ IF ++ + ++ +K ++ L
Sbjct: 25 LTPVLPDMVEPLKTTSHEVGL-----LISTYAISTAIFALVIGHFIDRVNRKKILVPCLV 79
Query: 84 LILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLYEADERASMIGLRTASL 143
+ ++G +SFFTS+ + R + GIG+ SL + +I D+Y+ + + + +L
Sbjct: 80 IYGLTGLVSFFTSDLQSLLILRFIQGIGVAGMTSLPMLVIADVYKDHKSLYAMNKISMAL 139
Query: 144 NIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVENQTHTLKASTTFDTKA 203
IG I G + +G NY +L Y+L +P+ F +PE Q +
Sbjct: 140 AIGSVSAPLIGGGLANLGWNYPFLFYVLSLPLAFVAMAFLPETRVQRDNKNHKGILNGLT 199
Query: 204 AL-------LMLITFLVGIAYIGATVKIPTLLVTKYHYATSFSSNMLTLLAFSGILVGSV 256
AL + ++F V +P +L Y + +LAF GI V V
Sbjct: 200 ALKELRILYTVFLSFAVFFILFSVLTYVPFMLQNVLGYTAKGAG---IILAFQGIAVMLV 256
Query: 257 FGKLVKVFQEKTLLIMILAMGI---GNVLFAL--ANNQIIFIVASILIGASFVGTMSSVF 311
+ VK K I+I+A G G +F++ A + + + ++ GA F +++
Sbjct: 257 VPR-VKTLASKHSTILIIATGFALDGLAIFSISFAYSIVAVFLLILIFGAGFGLAQAAID 315
Query: 312 FYISKNYAKEHNNFITSLALTAGNIGVILTPLIL 345
I + E + + T IG L+P++L
Sbjct: 316 AQIVQIAPSESKGGVLCIHNTMKYIGQCLSPIVL 349
>gi|23115038|ref|ZP_00100313.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 408
Score = 60.5 bits (145), Expect = 5e-08
Identities = 86/379 (22%), Positives = 162/379 (42%), Gaps = 18/379 (4%)
Query: 9 LTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNFV 68
L IL +F + A +P + + A + P + + ++ ++T+P+++ +LS
Sbjct: 16 LPILLFIVFQSAFNAFSPVLKGISAEF----PEVSVTLIQMVITLPSLLSLPMQLLSGVF 71
Query: 69 VTKLGKKNTVLLGLCLILMSGFISFFT-SNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
T L KK V + LC +L+ G S+ S L+G+G GL S+S ++IT+ +
Sbjct: 72 STYLRKKTLVQIALCFMLIGGLAPILVHSSIYAIFVSCGLIGLGQGLLISVSAALITEHF 131
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNVPEVE 187
+ ++R ++ G + + + G T +G + Y VYLLVIPV +P+ E
Sbjct: 132 DGNQRGTVFGFKQVASSAGIMFLTLCIGYLAMSAWYNAYWVYLLVIPVLIVVTMYLPKGE 191
Query: 188 NQTHTLKASTTFDTKAALL-------MLITFLVGIAYIGATVKIPTLLVTKYHYATSFSS 240
L T A+L + F +G I ++V K S
Sbjct: 192 LDAKLLGKGVGASTVKAILNPSFFYMCFMLFFMGALLFTFYTNISMMVVEKGLGEASAVG 251
Query: 241 NMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASILIG 300
+ L +F I VG + G +++ ++ +++ ++ + I + AN + I G
Sbjct: 252 QVTALNSFMTIGVGLIIGLVLRAAKKYLMVVAMVVLSIAFFILFSANTFAVVCYGGIAFG 311
Query: 301 ASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPSQLHLEPFMTP 360
+S +++S+ K + L + + GV +PL++ L + P
Sbjct: 312 IGAGLQQASTLYFLSEAVPKSSSTLGIGLGMAFISFGVNFSPLMVNTLKGVIFNMPN--- 368
Query: 361 FLITSGLMVINVFVYLVLM 379
SG M++ Y+VLM
Sbjct: 369 ---ASGSMLVAACGYIVLM 384
>gi|29347978|ref|NP_811481.1| putative sugar transporter
[Bacteroides thetaiotaomicron VPI-5482]
gi|29339880|gb|AAO77675.1| putative sugar transporter [Bacteroides
thetaiotaomicron VPI-5482]
Length = 410
Score = 60.1 bits (144), Expect = 6e-08
Identities = 76/383 (19%), Positives = 160/383 (40%), Gaps = 22/383 (5%)
Query: 9 LTILSISIFL-MSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSNF 67
+ I SIS + LA++P + L + P ++ L ++P+++I F++L
Sbjct: 16 IAIWSISALTSLPGLAVSPILGDLTKIF----PKATDLDIQMLTSLPSLLIIPFILLGGK 71
Query: 68 VVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDLY 127
+ K+ + +GL L SG + ++ + LLGIG GL LS +I+ +
Sbjct: 72 LTEKVDFVRILKIGLWLFAASGILYLISNKMWQLIVVSALLGIGSGLIIPLSTGLISKYF 131
Query: 128 EADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFF---FWKNVP 184
R GL +A N + T + G + + + +LVYLL + ++
Sbjct: 132 VGTYRVKQFGLSSAITNFTLVIATAVTGYLAEVSWHLPFLVYLLPLISILLVGHLKESRS 191
Query: 185 EVENQTHTLKASTTFDTKAA--------------LLMLITFLVGIAYIGATVKIPTLLVT 230
+ + + + + T AA L +++ + V + A + + L+
Sbjct: 192 DAAVEPSSQSTAPSGQTAAADTGGSKYGIHIRHLLQIMLFYGVTTFIVLAVIFNLSFLME 251
Query: 231 KYHYATSFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQI 290
K+H+++ S M++L + + G K+V +E+T +L+M +G L +A +
Sbjct: 252 KHHFSSGNSGLMISLFFLAIMAPGFCLDKIVDELKERTKAYSLLSMAVGLALIWIAPIEW 311
Query: 291 IFIVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLILTKLPS 350
+ I IL+G + ++ + + + + + ++L P I+ L +
Sbjct: 312 LIIPGCILVGLGYGIIQPMLYDKTTHTALPQKATMALAFVMMMNYLAILLYPFIIDFLQN 371
Query: 351 QLHLEPFMTPFLITSGLMVINVF 373
H + PF+ + ++ F
Sbjct: 372 LFHTQSQEFPFVFNLLITIVTFF 394
>gi|23474954|ref|ZP_00130245.1| hypothetical protein [Desulfovibrio
desulfuricans G20]
Length = 417
Score = 55.5 bits (132), Expect = 2e-06
Identities = 63/275 (22%), Positives = 120/275 (42%), Gaps = 16/275 (5%)
Query: 8 KLTILSISIFLMSHLAIAPAIPKL-YAFYHTQNPHIGLASVESLVTIPAMMITIFVILSN 66
K +++ I L + ++ IP L A + P + + + T+P +++T L+
Sbjct: 41 KNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIVLT---PLAG 97
Query: 67 FVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDL 126
+ + G+K ++ L L +G F N + R L G+G+ L +II DL
Sbjct: 98 ILADRYGRKKVLIPSLLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHATIIGDL 157
Query: 127 YEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFFWKNV--- 183
YE +R +G L++G AL I G++ +G + + + L +P+ F W+ +
Sbjct: 158 YEGPDRVRAMGYNAGVLSLGTALYPAIGGILGELGWHAPFFLPLATLPMAFIAWRGLTLP 217
Query: 184 -PEVENQ-----THTLKASTTFDTKAALLMLITFLVGIAYIGATVK-IPTLLVTKYHYAT 236
P+ +TL+A + +A L ++FL G + IP L ++ +
Sbjct: 218 APDTSQSMGAYFKNTLRAMKS--PQAVGLFSVSFLTFTMLYGPVITFIPILADHRFTASP 275
Query: 237 SFSSNMLTLLAFSGILVGSVFGKLVKVFQEKTLLI 271
+ + L + L S G+L + F+ LL+
Sbjct: 276 ATIGALFALTSLGTALSASRMGRLAEQFKPHRLLL 310
>gi|23113325|ref|ZP_00098711.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 425
Score = 53.1 bits (126), Expect = 7e-06
Identities = 63/319 (19%), Positives = 138/319 (42%), Gaps = 11/319 (3%)
Query: 6 SLKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILS 65
++K +LSI + +PA + H + ++ + TIP +++ +
Sbjct: 15 AVKAAVLSIMLLQYLQALTSPAAGAI--LKHFEQFGYTSLDIKQIQTIPTLVMIFACMAI 72
Query: 66 NFVVTKLGKKNTVLLGLCLILMSGFI-SFFTSNFSLAMASRLLLGIGIGLYNSLSISIIT 124
+ KL KK + + + LI G + A R++ G G G+ +L+ S I
Sbjct: 73 IPMANKLRKKTILKIAMALIFFGGIAPGIGPDSMMFIYACRVVFGCGYGMIYALASSFIV 132
Query: 125 DLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIP-VFFFFWK-- 181
DL++ E+ M+G +TA+ +IG + + G + A+ Y +L +L+ +P + WK
Sbjct: 133 DLFDGPEQKQMMGWKTAAGSIGGIIFQTVGGFLAAMYWKYAFLGFLVALPFILLILWKCP 192
Query: 182 ---NVPEVENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSF 238
+ E + + ++++ L + + + +P +++T+ T
Sbjct: 193 DPSGLEEFNPAKEAGRPKAKVEKGHWFVIVLAALNVMIFSSFMINMPIVIMTE-GLGTPN 251
Query: 239 SSNMLTLLAFSGILVGS-VFGKLVKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASI 297
+ ++ L GI +GS +G K+ + + IL GI V+ ++++ ++
Sbjct: 252 TIALVMNLFTVGIFLGSFTYGWTTKLLKRFDIPFTILVYGIVLVILPRFVTLPVYMICAL 311
Query: 298 LIGASFVGTMSSVFFYISK 316
+ G +F S+ +S+
Sbjct: 312 IFGWAFGAYNPSLVLAVSR 330
>gi|15889635|ref|NP_355316.1| AGR_C_4286p [Agrobacterium
tumefaciens]
gi|17936243|ref|NP_533033.1| MFS permease [drug] [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gi|25520010|pir||D97643 probable efflux protein cj1687 [imported] -
Agrobacterium tumefaciens (strain C58, Cereon)
gi|25523315|pir||AG2866 MFS permease [drug] [imported] -
Agrobacterium tumefaciens (strain C58, Dupont)
gi|15157533|gb|AAK88101.1| AGR_C_4286p [Agrobacterium tumefaciens
str. C58 (Cereon)]
gi|17740844|gb|AAL43349.1| MFS permease [drug] [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 400
Score = 53.1 bits (126), Expect = 8e-06
Identities = 67/313 (21%), Positives = 135/313 (42%), Gaps = 11/313 (3%)
Query: 6 SLKLTILSISIF-LMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVIL 64
+LKLT+L ++ +M+ +AP++P + + P + + S ++T+P++ + + +
Sbjct: 7 ALKLTLLFVATLTIMAGTTVAPSLPAIEQSF-LSTPDVEIMS-RMVLTLPSVFVALCAPI 64
Query: 65 SNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIIT 124
+ + + G+K +L + L +SG F + + + R LG+ IG ++ +++
Sbjct: 65 AGVLADRFGRKRLLLGAILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGTALVG 124
Query: 125 DLYEADERASMIGLRTASLNIGKALTTFIVGLVLAI---GVNYIYLVYLLVIPVFFFFWK 181
D +E R +GL+ A +G + G + I +Y V LL++P FF +
Sbjct: 125 DYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADIHWRAPFAVYAVALLILPAALFFLR 184
Query: 182 NVPEVENQTHTLKASTTFDTK---AALLMLITFLVGIAYIGATVKIPTLLVTKYHYATSF 238
P + T A+L + FLV + ++P L + S
Sbjct: 185 E-PARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLSGSV 243
Query: 239 SSNMLTLLAFSGILVGSVFGKL-VKVFQEKTLLIMILAMGIGNVLFALANNQIIFIVASI 297
+ + + +G L+ FG+L ++ L ++ M G L A A + A
Sbjct: 244 AGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLSALA 303
Query: 298 LIGASFVGTMSSV 310
++GA M S+
Sbjct: 304 VVGAGLGAVMPSI 316
>gi|30023448|ref|NP_835079.1| Transporter, MFS superfamily [Bacillus
cereus ATCC 14579]
gi|29899009|gb|AAP12280.1| Transporter, MFS superfamily [Bacillus
cereus ATCC 14579]
Length = 399
Score = 52.0 bits (123), Expect = 2e-05
Identities = 76/340 (22%), Positives = 155/340 (45%), Gaps = 26/340 (7%)
Query: 60 IFVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLS 119
IF ILS+ K+G+K+ ++ L L + ++ T+ ++ + R L+G+G+G ++
Sbjct: 65 IFGILSD----KIGRKSVFIITLLLFSIGSGLTALTTTLAMFLVLRFLIGMGLGGELPVA 120
Query: 120 ISIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFF 179
+++++ EA ER ++ L S G L ++ + + + L IP +
Sbjct: 121 STLVSESVEAHERGKIVVL-LESFWAGGWLIAALISYFVIPKYGWEVAMVLSAIPALYAL 179
Query: 180 WK--NVPE------VENQTHTLKA-----STTFDTKAALLMLITFLVGIAYIGATVKIPT 226
+ N+P+ VE + ++ S + +L ++ F V +Y G + +P+
Sbjct: 180 YLRWNLPDSPRFQKVEKRPSVIENIKSVWSGEYRKATIMLWILWFCVVFSYYGMFLWLPS 239
Query: 227 LLVTK-YHYATSFSSNM-LTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFA 284
++V K + SF + +TL G + F + ++ ++ L+ ++ LF
Sbjct: 240 VMVLKGFSLIKSFQYVLIMTLAQLPGYFTAAWF--IERLGRKFVLVTYLIGTACSAYLFG 297
Query: 285 LANNQIIFIVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLI 344
+A++ + IVA +L+ +G +++ Y + Y +A G IG IL PL+
Sbjct: 298 VADSLTVLIVAGMLLSFFNLGAWGALYAYTPEQYPTVIRGTGAGMAAAFGRIGGILGPLL 357
Query: 345 LTKL-PSQLHLEPFMTPFLITSGLMVINVFVYLVLMSKNK 383
+ L S+ L T F G ++I VF ++L + K
Sbjct: 358 VGYLVASEASLSLIFTIF---CGSILIGVFAVIILGQETK 394
>gi|30265438|ref|NP_847815.1| major facilitator family transporter
[Bacillus anthracis str. Ames]
gi|30260116|gb|AAP29301.1| major facilitator family transporter
[Bacillus anthracis str. Ames]
Length = 399
Score = 51.2 bits (121), Expect = 3e-05
Identities = 76/340 (22%), Positives = 154/340 (44%), Gaps = 26/340 (7%)
Query: 60 IFVILSNFVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLS 119
+F ILS+ K+G+K+ ++ L L + ++ T+ ++ + R L+G+G+G ++
Sbjct: 65 VFGILSD----KIGRKSVFIITLLLFSIGSGLTALTTTLAMFLVLRFLIGMGLGGELPVA 120
Query: 120 ISIITDLYEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLVIPVFFFF 179
+++++ EA ER ++ L S G L ++ + + + L IP +
Sbjct: 121 STLVSESVEAHERGKIVVL-LESFWAGGWLIAALISYFVIPKYGWEVAMILSAIPALYAL 179
Query: 180 WK--NVPE------VENQTHTLKA-----STTFDTKAALLMLITFLVGIAYIGATVKIPT 226
+ N+P+ VE + ++ S + +L ++ F V +Y G + +P+
Sbjct: 180 YLRWNLPDSPRFQKVEKRPSVIENIKSVWSGEYRKATIMLWILWFSVVFSYYGMFLWLPS 239
Query: 227 LLVTK-YHYATSFSSNM-LTLLAFSGILVGSVFGKLVKVFQEKTLLIMILAMGIGNVLFA 284
++V K + SF + +TL G + F + ++ ++ L+ ++ LF
Sbjct: 240 VMVLKGFSLIKSFQYVLIMTLAQLPGYFTAAWF--IERLGRKFVLVTYLIGTACSAYLFG 297
Query: 285 LANNQIIFIVASILIGASFVGTMSSVFFYISKNYAKEHNNFITSLALTAGNIGVILTPLI 344
+A + + IVA +L+ +G +++ Y + Y +A G IG IL PL+
Sbjct: 298 VAESLTVLIVAGMLLSFFNLGAWGALYAYTPEQYPTVIRGTGAGMAAAFGRIGGILGPLL 357
Query: 345 LTKL-PSQLHLEPFMTPFLITSGLMVINVFVYLVLMSKNK 383
+ L SQ L T F G ++I VF ++L + K
Sbjct: 358 VGYLVASQASLSLIFTIF---CGSILIGVFAVIILGQETK 394
>gi|22406137|ref|ZP_00000992.1| hypothetical protein [Ferroplasma
acidarmanus]
Length = 469
Score = 49.7 bits (117), Expect = 9e-05
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 7 LKLTILSISIFLMSHLAIAPAIPKLYAFYHTQNPHIGLASVESLVTIPAMMITIFVILSN 66
L +T LS + + + A+P + +H+ ++ L +++ M++ I
Sbjct: 13 LTVTTLSTLMAAIDSTIVYLALPAMGQTFHSGISYLTLVVAAYIISTTVMLVPAIEI--- 69
Query: 67 FVVTKLGKKNTVLLGLCLILMSGFISFFTSNFSLAMASRLLLGIGIGLYNSLSISIITDL 126
++G +N ++G + +S I + N ++ + R + GIG G+ S I II
Sbjct: 70 --TKRIGNRNFYIIGFSIFTVSSLIIAVSLNIAMVIIFRFVEGIGAGIMTSSDIPIILGA 127
Query: 127 YEADERASMIGLRTASLNIGKALTTFIVGLVLAIGVNYIYLVYLLV-IPVFFFFWKNVPE 185
+ ER IGL + + +IG + + G ++AI YI+L+ + + I F +K + +
Sbjct: 128 FRKGERGKAIGLNSIAWSIGTLIGPVLGGFLVAINWRYIFLINVPIGIGTIFAGYKIIKK 187
Query: 186 VENQTHTLKASTTFDTKAALLMLITFLVGIAYIGATVKIPTLLV 229
+ +K +T + L LI ++GIA I + L++
Sbjct: 188 DKVNKLPIKYKSTI---SMALFLIPLIMGIALINEYYLLIALII 228
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.328 0.142 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 298,471,944
Number of Sequences: 1487057
Number of extensions: 11587116
Number of successful extensions: 55896
Number of sequences better than 1.0e-04: 276
Number of HSP's better than 0.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 55515
Number of HSP's gapped (non-prelim): 389
length of query: 383
length of database: 479,114,161
effective HSP length: 126
effective length of query: 257
effective length of database: 291,744,979
effective search space: 74978459603
effective search space used: 74978459603
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 117 (49.7 bits)