WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= A10G08_CONSENSUS (481 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 3 Sequences : less than 3 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 1117 131 |=========================================== 6310 986 97 |================================ 3980 889 121 |======================================== 2510 768 80 |========================== 1580 688 69 |======================= 1000 619 42 |============== 631 577 24 |======== 398 553 21 |======= 251 532 12 |==== 158 520 8 |== 100 512 2 |: 63.1 510 2 |: 39.8 508 3 |= 25.1 505 0 | 15.8 505 1 |: >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 504 <<<<<<<<<<<<<<<<< 10.0 504 1 |: 6.31 503 1 |: 3.98 502 0 | 2.51 502 2 |: 1.58 500 0 | 1.00 500 0 | 0.63 500 2 |: 0.40 498 1 |: 0.25 497 0 | 0.16 497 0 | 0.10 497 0 | 0.063 497 1 |: 0.040 496 0 | 0.025 496 0 | 0.016 496 0 | 0.010 496 0 | 0.0063 496 0 | 0.0040 496 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|462137|sp|P34921|G3PC_DIACAGLYCERALDEHYDE 3-PHOSPH... +2 458 2.9e-49 2 gi|462141|sp|P34783|G3P_ATRNUGLYCERALDEHYDE 3-PHOSPHA... +2 453 4.2e-48 2 gi|120667|sp|P25858|G3PC_ARATHGLYCERALDEHYDE 3-PHOSPH... +2 452 1.4e-47 2 gi|120671|sp|P17878|G3PC_MESCRGLYCERALDEHYDE 3-PHOSPH... +2 441 1.4e-47 2 gi|6721173|gb|AAF26801.1|AC016829_25(AC016829) glycer... +2 449 2.9e-47 2 gi|120675|sp|P04796|G3PC_SINALGLYCERALDEHYDE 3-PHOSPH... +2 441 4.7e-47 2 gi|4539543|emb|CAB39974.1|(AJ133422) glyceraldehyde-3... +2 447 6.0e-47 2 gi|9958054|gb|AAG09543.1|AC011810_2(AC011810) Putativ... +2 444 9.8e-47 2 gi|120668|sp|P08477|G3PC_HORVUGLYCERALDEHYDE 3-PHOSPH... +2 430 2.0e-46 2 gi|120673|sp|P26520|G3PC_PETHYGLYCERALDEHYDE 3-PHOSPH... +2 434 3.3e-46 2 gi|7431528|pir||T07730glyceraldehyde-3-phosphate dehy... +2 442 4.2e-46 2 gi|3435286|gb|AAC32382.1|(AF082597) cytosolic glycera... +2 442 4.2e-46 2 gi|7579064|gb|AAF64241.1|(AF251217) cytosolic glycera... +2 432 4.2e-46 2 gi|3435290|gb|AAC32384.1|(AF082599) cytosolic glycera... +2 444 5.3e-46 2 gi|120669|sp|P26518|G3PC_MAGLIGLYCERALDEHYDE 3-PHOSPH... +2 435 5.3e-46 2 gi|120674|sp|P26521|G3PC_RANACGLYCERALDEHYDE 3-PHOSPH... +2 434 5.3e-46 2 gi|3023813|sp|Q41595|G3PC_TAXBAGLYCERALDEHYDE 3-PHOSP... +2 422 1.4e-45 2 gi|2078386|gb|AAB59010.1|(U96623) glyceraldehyde-3-ph... +2 426 1.8e-45 2 gi|3435288|gb|AAC32383.1|(AF082598) cytosolic glycera... +2 441 2.3e-45 2 gi|120676|sp|P09094|G3PC_TOBACGLYCERALDEHYDE 3-PHOSPH... +2 432 2.3e-45 2 gi|3435294|gb|AAC32386.1|(AF082601) cytosolic glycera... +2 434 6.0e-45 2 gi|2078298|gb|AAB54003.1|(U97257) glyceraldehyde 3-ph... +2 430 7.6e-45 2 gi|462140|sp|P34924|G3PC_PINSYGLYCERALDEHYDE 3-PHOSPH... +2 420 7.6e-45 2 gi|120672|sp|P26519|G3PC_PETCRGLYCERALDEHYDE 3-PHOSPH... +2 420 2.6e-44 2 gi|3023816|sp|Q42977|G3PC_ORYSAGLYCERALDEHYDE 3-PHOSP... +2 412 3.3e-44 2 gi|82695|pir||PQ0179glyceraldehyde-3-phosphate dehydr... +2 412 8.6e-44 2 gi|6166167|sp|Q43247|G3PE_MAIZEGLYCERALDEHYDE 3-PHOSP... +2 412 8.6e-44 2 gi|7431535|pir||T02723glyceraldehyde-3-phosphate dehy... +2 412 8.6e-44 2 gi|120680|sp|P26517|G3PX_HORVUGLYCERALDEHYDE 3-PHOSPH... +2 406 2.3e-43 2 gi|3023814|sp|Q42671|G3PC_CRAPLGLYCERALDEHYDE 3-PHOSP... +2 423 2.9e-43 2 gi|82694|pir||PQ0178glyceraldehyde-3-phosphate dehydr... +2 403 5.9e-43 2 gi|6016075|sp|Q09054|G3PD_MAIZEGLYCERALDEHYDE 3-PHOSP... +2 403 5.9e-43 2 gi|66009|pir||DEZMGCglyceraldehyde-3-phosphate dehydr... +2 401 7.6e-43 2 gi|120670|sp|P08735|G3PC_MAIZEGLYCERALDEHYDE 3-PHOSPH... +2 401 7.6e-43 2 gi|120666|sp|P25861|G3PC_ANTMAGLYCERALDEHYDE 3-PHOSPH... +2 450 1.5e-41 1 gi|1345501|emb|CAA42103.1|(X59517) glycolytic glycera... +2 450 1.5e-41 1 gi|3023812|sp|Q39769|G3PC_GINBIGLYCERALDEHYDE 3-PHOSP... +2 447 3.2e-41 1 gi|120703|sp|P26988|G3P_PHYINGLYCERALDEHYDE 3-PHOSPHA... +2 391 3.6e-41 2 gi|462138|sp|P34922|G3PC_PEAGLYCERALDEHYDE 3-PHOSPHAT... +2 446 4.0e-41 1 gi|5678779|gb|AAD46735.1|(AF136119) glyceraldehyde 3-... +2 445 5.2e-41 1 gi|232118|sp|P29497|G3P_COCHEGLYCERALDEHYDE 3-PHOSPHA... +2 383 9.5e-41 2 gi|101739|pir||S22150glyceraldehyde-3-phosphate dehyd... +2 383 9.5e-41 2 gi|729550|sp|P06977|G3P1_ECOLIGLYCERALDEHYDE 3-PHOSPH... +2 376 9.5e-41 2 gi|468157|gb|AAC43271.1|(U07750) glyceraldehyde 3-pho... +2 376 9.5e-41 2 gi|10120771|pdb|1DC3|AChain A, Structural Analysis Of... +2 376 9.5e-41 2 gi|1736407|dbj|BAA18884.1|(D90822) Glyceraldehyde-3-p... +2 376 9.5e-41 2 gi|2266741|emb|CAA45835.1|(X64537) triosephosphate is... +2 391 1.1e-40 2 gi|6016073|sp|O43026|G3P2_SCHPOGLYCERALDEHYDE 3-PHOSP... +2 393 1.2e-40 2 gi|3059122|emb|CAA06030.1|(AJ003783) glyeraldehyde-3-... +2 387 1.5e-40 2 gi|2494642|sp|P78958|G3P1_SCHPOGLYCERALDEHYDE 3-PHOSP... +2 391 2.0e-40 2 Locally-aligned regions (HSPs) with respect to query sequence: Locus_ID Frame 3 Hits gi|462137 | _______ gi|462141 | _______ gi|120667 | _______ gi|120671 | _______ gi|6721173 | _______ gi|120675 | _______ gi|4539543 | _______ gi|9958054 | _______ gi|120668 | _______ gi|120673 | _______ gi|7431528 | _______ gi|3435286 | ______ gi|7579064 | _______ gi|3435290 | ______ gi|120669 | _______ gi|120674 | _______ gi|3023813 | _______ gi|2078386 | _______ gi|3435288 | ______ gi|120676 | _______ gi|3435294 | ______ gi|2078298 | _______ gi|462140 | _______ gi|120672 | _______ gi|3023816 | _______ gi|82695 | _______ gi|6166167 | _______ gi|7431535 | _______ gi|120680 | _______ gi|3023814 | _______ gi|82694 | _______ gi|6016075 | _______ gi|66009 | _______ gi|120670 | _______ gi|120666 | _______ gi|1345501 | _______ gi|120703 | _______ gi|462138 | _______ gi|232118 | _______ gi|101739 | _______ gi|729550 | _______ gi|468157 | _______ gi|10120771 | _______ gi|1736407 | _______ gi|2266741 | _______ gi|6016073 | _______ gi|3059122 | _______ gi|2494642 | _______ __________________________________________________ Query sequence: | | | | | 161 0 50 100 150 Locus_ID Frame 2 Hits gi|462137 |_______________________________ gi|462141 |_______________________________ gi|120667 |_______________________________ gi|120671 |_______________________________ gi|6721173 |_______________________________ gi|120675 |_______________________________ gi|4539543 |_______________________________ gi|9958054 |_______________________________ gi|120668 |_______________________________ gi|120673 |_______________________________ gi|7431528 |_______________________________ gi|3435286 |_______________________________ gi|7579064 |_______________________________ gi|3435290 |_______________________________ gi|120669 |_______________________________ gi|120674 |_______________________________ gi|3023813 |_______________________________ gi|2078386 |_______________________________ gi|3435288 |_______________________________ gi|120676 |_______________________________ gi|3435294 |_______________________________ gi|2078298 |_______________________________ gi|462140 |_______________________________ gi|120672 |_______________________________ gi|3023816 |_______________________________ gi|82695 |_______________________________ gi|6166167 |_______________________________ gi|7431535 |_______________________________ gi|120680 |_______________________________ gi|3023814 |_______________________________ gi|82694 |_______________________________ gi|6016075 |_______________________________ gi|66009 |_______________________________ gi|120670 |_______________________________ gi|120666 |_________________________________________ gi|1345501 |_________________________________________ gi|3023812 |_________________________________________ gi|120703 |_______________________________ gi|462138 |_________________________________________ gi|5678779 |_______________________________ gi|232118 |_______________________________ gi|101739 |_______________________________ gi|729550 |_______________________________ gi|468157 |_______________________________ gi|10120771 |_______________________________ gi|1736407 |_______________________________ gi|2266741 |_______________________________ gi|6016073 |________________________________ gi|3059122 |_______________________________ gi|2494642 |________________________________ __________________________________________________ Query sequence: | | | | | 161 0 50 100 150 Locus_ID Frame 1 Hits gi|462137 | ___ gi|462141 | ___ gi|120667 | ___ gi|120671 | ___ gi|6721173 | ___ gi|120675 | ___ gi|4539543 | ___ gi|9958054 | ___ gi|120668 | ___ gi|7431528 | ___ gi|7579064 | ___ gi|120669 | ___ gi|120674 | ___ gi|3023813 | ___ gi|2078386 | ___ gi|120676 | ___ gi|2078298 | ___ gi|462140 | ___ gi|120672 | ___ gi|3023816 | ___ gi|82695 | ___ gi|6166167 | ___ gi|7431535 | ___ gi|120680 | ___ gi|3023814 | ___ gi|82694 | ___ gi|6016075 | ___ gi|66009 | ___ gi|120670 | ___ gi|120703 | ___ gi|232118 | ___ gi|101739 | ___ gi|2266741 | ___ gi|6016073 | ___ gi|3059122 | ___ gi|2494642 | ___ __________________________________________________ Query sequence: | | | | | 161 0 50 100 150
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WARNING: Descriptions of 454 database sequences were not reported due to the limiting value of parameter V = 50.>gi|462137|sp|P34921|G3PC_DIACA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC Length = 338 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 338 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..338 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 256..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 458 (161.2 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49 Identities = 91/99 (91%), Positives = 97/99 (97%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP+LNGKLTGMSFRVPTVDVSVVDLTVR+ KPATYEQ+K+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRIEKPATYEQVKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 266 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 304 Score = 82 (28.9 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNF+KLVSWYDN G Sbjct: 305 LNDNFIKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSTRV 326
>gi|462141|sp|P34783|G3P_ATRNU GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH) >gi|1085816|pir||S38570 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Atriplex nummularia >gi|409575|gb|AAA03442.1| (U02886) glyceraldehyde-3-phosphate dehydrogenase [Atriplex nummularia] >gi|414607|emb|CAA53269.1| (X75597) glyceraldehyde-3-phosphate dehydrogenase [Atriplex nummularia] Length = 360 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 360 0 150 300 __________________ Annotated Domains: DOMO DM00113: GLYCERALDEHYDE-3-PHOSPHATEDEHYD 3..334 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..339 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 256..334 PRODOM PD060425: G3P_ATRNU 336..359 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 453 (159.5 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48 Identities = 92/98 (93%), Positives = 95/98 (96%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL K ATYEQIK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEQIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGI 295 EESEGK+KGILGYTE DVVSTDFVGDNRSSIFDA+AGI Sbjct: 266 EESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGI 303 Score = 76 (26.8 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 305 LNGNFVKLVSWYDNEWG 321 Score = 41 (14.4 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 320 WGYSSRV 326
>gi|120667|sp|P25858|G3PC_ARATH GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|81622|pir||JQ1287 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), cytosolic - Arabidopsis thaliana >gi|166706|gb|AAA32794.1| (M64116) cystolic glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] >gi|166710|gb|AAA32796.1| (M64119) glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 338 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 7..18 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 84..129 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 150..184 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 187..241 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 311..331 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 156 Entrez active site: ACTIVATES THIOL GROUP DURIN 183 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 5..338 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 115..128 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 150..168 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 177..193 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 234..251 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 274..289 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 6..36 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 45..121 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 123..159 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 161..254 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 258..336 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 154..161 __________________ Plus Strand HSPs: Score = 452 (159.1 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47 Identities = 92/99 (92%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL K ATYE+IK AIK Sbjct: 208 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYEEIKKAIK 267 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 268 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306 Score = 72 (25.3 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+D FVKLVSWYDN G Sbjct: 307 LSDKFVKLVSWYDNEWG 323 Score = 41 (14.4 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 322 WGYSSRV 328
>gi|120671|sp|P17878|G3PC_MESCR GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|99513|pir||A35080 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - common ice plant >gi|167260|gb|AAA33031.1| (M29956) NAD-glyceraldehyde-3-phosphate dehydrogenase [Mesembryanthemum crystallinum] >gi|167264|gb|AAA33033.1| (J05223) glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) [Mesembryanthemum crystallinum] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez Domain: BINDING TO NAD. 1..151 Entrez Domain: CATALYTIC. 152..337 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 441 (155.2 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47 Identities = 88/99 (88%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPT DVSVVDLTVR+ K A+YEQIK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTCDVSVVDLTVRIEKAASYEQIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE D+VSTDF+GDNRSSIFDA+AGIS Sbjct: 266 EESEGKLKGILGYTEDDLVSTDFIGDNRSSIFDAKAGIS 304 Score = 83 (29.2 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 305 LNDNFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSTRV 326
>gi|6721173|gb|AAF26801.1|AC016829_25 (AC016829) glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC) [Arabidopsis thaliana] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 338 0 150 300 Plus Strand HSPs: Score = 449 (158.1 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47 Identities = 91/99 (91%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK AIK Sbjct: 208 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIK 267 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 268 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306 Score = 72 (25.3 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+D FVKLVSWYDN G Sbjct: 307 LSDKFVKLVSWYDNEWG 323 Score = 41 (14.4 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 322 WGYSSRV 328
>gi|120675|sp|P04796|G3PC_SINAL GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66011|pir||DEIS3C glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), cytosolic - white mustard >gi|21143|emb|CAA27844.1| (X04301) GAPDH (aa 1-338) [Sinapis alba] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 338 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 6..17 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 83..128 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 149..183 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 186..240 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 310..330 Entrez Domain: BINDING TO NAD. 2..153 Entrez Domain: CATALYTIC. 154..338 Entrez Domain: EXTERNAL LOOP. 56..75 Entrez Domain: S-LOOP. 183..206 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 156 Entrez active site: ACTIVATES THIOL GROUP DURIN 183 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 4..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 114..127 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 149..167 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 176..192 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 233..250 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 273..288 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 5..35 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 44..120 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 122..158 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 160..253 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 154..161 __________________ Plus Strand HSPs: Score = 441 (155.2 bits), Expect = 4.7e-47, Sum P(2) = 4.7e-47 Identities = 89/99 (89%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK AIK Sbjct: 208 FNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIK 267 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EES+GKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 268 EESQGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306 Score = 78 (27.5 bits), Expect = 4.7e-47, Sum P(2) = 4.7e-47 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+DNFVKLVSWYDN G Sbjct: 307 LSDNFVKLVSWYDNEWG 323 Score = 38 (13.4 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 322 WGYSTRV 328
>gi|4539543|emb|CAB39974.1| (AJ133422) glyceraldehyde-3-phosphate dehydrogenase [Nicotiana tabacum] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 337 0 150 300 Plus Strand HSPs: Score = 447 (157.4 bits), Expect = 6.0e-47, Sum P(2) = 6.0e-47 Identities = 90/99 (90%), Positives = 96/99 (96%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K ATY++IK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDEIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 266 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 304 Score = 71 (25.0 bits), Expect = 6.0e-47, Sum P(2) = 6.0e-47 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ NFVKLVSWYDN G Sbjct: 305 LSKNFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 1.8e-43, Sum P(2) = 1.8e-43 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSTRV 326
>gi|9958054|gb|AAG09543.1|AC011810_2 (AC011810) Putative glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 338 0 150 300 Plus Strand HSPs: Score = 444 (156.3 bits), Expect = 9.8e-47, Sum P(2) = 9.8e-47 Identities = 89/99 (89%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP+LNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK AIK Sbjct: 208 FNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIK 267 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGK+KGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 268 EESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306 Score = 72 (25.3 bits), Expect = 9.8e-47, Sum P(2) = 9.8e-47 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+D FVKLVSWYDN G Sbjct: 307 LSDKFVKLVSWYDNEWG 323 Score = 41 (14.4 bits), Expect = 1.8e-43, Sum P(2) = 1.8e-43 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 322 WGYSSRV 328
>gi|120668|sp|P08477|G3PC_HORVU GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|82399|pir||A24159 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), cytosolic - barley (fragment) >gi|167044|gb|AAA32956.1| (M36650) glyceraldehyde-3-phosphate dehydrogenase [Hordeum vulgare] >gi|225347|prf||1301218A dehydrogenase,glyceraldehydephosphate [Hordeum vulgare var. distichum] Length = 305 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | || 305 0 50 100 150 200 250 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 122 Entrez active site: ACTIVATES THIOL GROUP DURIN 149 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..305 __________________ Plus Strand HSPs: Score = 430 (151.4 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46 Identities = 86/99 (86%), Positives = 93/99 (93%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTVDVSVVDLTVRL KPATYEQIK+AIK Sbjct: 174 FNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLAKPATYEQIKAAIK 233 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEG LKGILGY + D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 234 EESEGNLKGILGYVDEDLVSTDFQGDSRSSIFDAKAGIA 272 Score = 83 (29.2 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 273 LNDNFVKLVSWYDNEWG 289 Score = 38 (13.4 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 288 WGYSTRV 294
>gi|120673|sp|P26520|G3PC_PETHY GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66013|pir||DEPJG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - garden petunia >gi|20551|emb|CAA42904.1| (X60346) glyceraldehyde 3-phosphate dehydrogenase [Petunia x hybrida] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 256..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 434 (152.8 bits), Expect = 3.3e-46, Sum P(2) = 3.3e-46 Identities = 87/99 (87%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K ATY++IK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDEIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGI G+TE DVVSTDF+GDNRSSIFDA+AGI+ Sbjct: 266 EESEGKLKGIPGHTEDDVVSTDFIGDNRSSIFDAKAGIA 304 Score = 77 (27.1 bits), Expect = 3.3e-46, Sum P(2) = 3.3e-46 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ NFVKLVSWYDN MG Sbjct: 305 LSKNFVKLVSWYDNEMG 321
>gi|7431528|pir||T07730 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - tomato >gi|1931619|gb|AAB51592.1| (U93208) glyceraldehyde 3-phosphate dehydrogenase [Lycopersicon esculentum] Length = 295 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): __________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | | | | 295 0 50 100 150 200 250 Plus Strand HSPs: Score = 442 (155.6 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 89/99 (89%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K ATY++IK+AIK Sbjct: 164 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDEIKAAIK 223 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNR SIFDA+AGI+ Sbjct: 224 EESEGKLKGILGYTEDDVVSTDFVGDNRPSIFDAKAGIA 262 Score = 68 (23.9 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 12/17 (70%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ NFVKLV+WYDN G Sbjct: 263 LSKNFVKLVAWYDNEWG 279 Score = 38 (13.4 bits), Expect = 5.9e-43, Sum P(2) = 5.9e-43 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 278 WGYSTRV 284
>gi|3435286|gb|AAC32382.1| (AF082597) cytosolic glyceraldehyde-3-phosphate dehydrogenase [Leavenworthia crassa] Length = 125 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): ________________________________________ __________________________________________________ Database sequence: | | | | 125 0 50 100 Plus Strand HSPs: Score = 442 (155.6 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 89/99 (89%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K ATY++IK AIK Sbjct: 11 FNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRIEKAATYDEIKKAIK 70 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 71 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 109 Score = 68 (23.9 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 12/14 (85%), Positives = 13/14 (92%), Frame = +3 Query: 300 LNDNFVKLVSWYDN 341 L+D FVKLVSWYDN Sbjct: 110 LSDKFVKLVSWYDN 123
>gi|7579064|gb|AAF64241.1| (AF251217) cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPDH [Triticum aestivum] Length = 235 Frame 3 hits (HSPs): _____ Frame 2 hits (HSPs): ______________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | | | 235 0 50 100 150 200 Plus Strand HSPs: Score = 432 (152.1 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 86/99 (86%), Positives = 93/99 (93%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTVDVSVVDLTVRL KPATY+QIK+AIK Sbjct: 104 FNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLAKPATYDQIKAAIK 163 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEG LKGILGY + D+VSTDF GDNRSSIFDA+AGI+ Sbjct: 164 EESEGNLKGILGYVDEDLVSTDFQGDNRSSIFDAKAGIA 202 Score = 78 (27.5 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+FVKLVSWYDN G Sbjct: 203 LNDHFVKLVSWYDNEWG 219 Score = 38 (13.4 bits), Expect = 6.7e-42, Sum P(2) = 6.7e-42 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 218 WGYSTRV 224
>gi|3435290|gb|AAC32384.1| (AF082599) cytosolic glyceraldehyde-3-phosphate dehydrogenase [Leavenworthia uniflora] >gi|3435292|gb|AAC32385.1| (AF082600) cytosolic glyceraldehyde-3-phosphate dehydrogenase [Leavenworthia crassa] Length = 125 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): ________________________________________ __________________________________________________ Database sequence: | | | | 125 0 50 100 Plus Strand HSPs: Score = 444 (156.3 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 89/99 (89%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP+LNGKLTGMSFRVPTVDVSVVDLTVR+ K ATY++IK AIK Sbjct: 11 FNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRIEKAATYDEIKKAIK 70 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 71 EESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 109 Score = 65 (22.9 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 11/14 (78%), Positives = 13/14 (92%), Frame = +3 Query: 300 LNDNFVKLVSWYDN 341 L+D FVKLV+WYDN Sbjct: 110 LSDKFVKLVAWYDN 123
>gi|120669|sp|P26518|G3PC_MAGLI GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66014|pir||DEJMG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Magnolia liliiflora >gi|19566|emb|CAA42905.1| (X60347) glyceraldehyde 3-phosphate dehydrogenase [Magnolia liliiflora] Length = 341 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): _ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 341 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 7..18 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 84..129 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 150..184 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 187..241 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 311..331 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 156 Entrez active site: ACTIVATES THIOL GROUP DURIN 183 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 5..341 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 115..128 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 150..168 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 177..193 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 234..251 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 274..289 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 6..36 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 45..121 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 123..159 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 161..254 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 259..337 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 154..161 __________________ Plus Strand HSPs: Score = 435 (153.1 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 87/99 (87%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K A+YE+IK+ IK Sbjct: 208 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAASYEEIKAVIK 267 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 ESEGKLKGILGYTE DVVSTDF+GDNRSSIFDA+AGI+ Sbjct: 268 AESEGKLKGILGYTEEDVVSTDFIGDNRSSIFDAKAGIA 306 Score = 74 (26.0 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 13/17 (76%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN++FVKLVSWYDN G Sbjct: 307 LNEHFVKLVSWYDNEWG 323 Score = 41 (14.4 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 322 WGYSSRV 328
>gi|120674|sp|P26521|G3PC_RANAC GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66015|pir||DENDG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - common buttercup >gi|21066|emb|CAA42903.1| (X60345) glyceraldehyde 3-phosphate dehydrogenase [Ranunculus acris] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 338 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 6..17 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 83..128 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 149..183 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 186..240 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 310..330 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 155 Entrez active site: ACTIVATES THIOL GROUP DURIN 182 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 3..338 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 114..127 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 149..167 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 176..192 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 233..250 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 273..288 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 5..35 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 44..120 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 122..158 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 160..253 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 153..160 __________________ Plus Strand HSPs: Score = 434 (152.8 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 88/99 (88%), Positives = 93/99 (93%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVV LTVRL K ATY IK+AIK Sbjct: 207 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVGLTVRLEKKATYADIKAAIK 266 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDF+GDNRSSIFDA+AGI+ Sbjct: 267 EESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIA 305 Score = 75 (26.4 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDN VKLVSWYDN G Sbjct: 306 LNDNCVKLVSWYDNEWG 322 Score = 41 (14.4 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 321 WGYSSRV 327
>gi|3023813|sp|Q41595|G3PC_TAXBA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|435114|gb|AAA89207.1| (L26922) glyceraldehyde-phosphate dehydrogenase [Taxus baccata] Length = 340 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 340 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 8..19 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 85..130 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 151..185 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 188..242 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 312..332 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 157 Entrez active site: ACTIVATES THIOL GROUP DURIN 184 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 5..340 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 116..129 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 151..169 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 178..194 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 235..252 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 275..290 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 7..37 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 46..122 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 124..160 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 162..256 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 259..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 155..162 __________________ Plus Strand HSPs: Score = 422 (148.6 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45 Identities = 85/99 (85%), Positives = 92/99 (92%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGM FRVPT DVSVVDLTV+L K ATY +IK+AIK Sbjct: 209 FNIIPSSTGAAKAVGKVLPVLNGKLTGMCFRVPTQDVSVVDLTVKLEKSATYGEIKAAIK 268 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDF+GD+RSSIFDA+AGI+ Sbjct: 269 EESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIA 307 Score = 83 (29.2 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 308 LNDNFVKLVSWYDNEWG 324 Score = 41 (14.4 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 323 WGYSSRV 329
>gi|2078386|gb|AAB59010.1| (U96623) glyceraldehyde-3-phosphate-dehydrogenase [Selaginella lepidophylla] Length = 340 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 340 0 150 300 Plus Strand HSPs: Score = 426 (150.0 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45 Identities = 84/99 (84%), Positives = 93/99 (93%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPT DVSVVDLTVRL KPA+YE+IK A+K Sbjct: 209 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTADVSVVDLTVRLEKPASYEEIKKAVK 268 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGI+GYTE VVS+DF+GD+RSSIFDA AGI+ Sbjct: 269 EESEGKLKGIMGYTEDAVVSSDFIGDSRSSIFDAAAGIA 307 Score = 78 (27.5 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+FVKLVSWYDN G Sbjct: 308 LNDSFVKLVSWYDNEWG 324 Score = 38 (13.4 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 323 WGYSNRV 329
>gi|3435288|gb|AAC32383.1| (AF082598) cytosolic glyceraldehyde-3-phosphate dehydrogenase [Leavenworthia stylosa] Length = 125 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): ________________________________________ __________________________________________________ Database sequence: | | | | 125 0 50 100 Plus Strand HSPs: Score = 441 (155.2 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45 Identities = 88/99 (88%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K ATY++IK AIK Sbjct: 11 FNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRIEKAATYDEIKKAIK 70 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDF+GDNRSSIFDA+AGI+ Sbjct: 71 EESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIA 109 Score = 62 (21.8 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45 Identities = 11/14 (78%), Positives = 12/14 (85%), Frame = +3 Query: 300 LNDNFVKLVSWYDN 341 L+D FVK VSWYDN Sbjct: 110 LSDKFVKQVSWYDN 123
>gi|120676|sp|P09094|G3PC_TOBAC GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|82165|pir||C24430 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) (EC 1.2.1.13) C, cytosolic - common tobacco (fragment) >gi|170241|gb|AAA34077.1| (M14419) glyceraldehyde-3-phosphate dehydrogenase [Nicotiana tabacum] Length = 326 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 326 0 150 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 143 Entrez active site: ACTIVATES THIOL GROUP DURIN 170 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..326 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 141..148 __________________ Plus Strand HSPs: Score = 432 (152.1 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45 Identities = 87/99 (87%), Positives = 95/99 (95%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K A+Y+ IK+AIK Sbjct: 195 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEASYDDIKAAIK 254 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILG+TE DVVSTDFVGD+RSSIFDA+AGI+ Sbjct: 255 EESEGKLKGILGFTEDDVVSTDFVGDSRSSIFDAKAGIA 293 Score = 71 (25.0 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ NFVKLVSWYDN G Sbjct: 294 LSKNFVKLVSWYDNEWG 310 Score = 41 (14.4 bits), Expect = 3.2e-42, Sum P(2) = 3.2e-42 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 309 WGYSSRV 315
>gi|3435294|gb|AAC32386.1| (AF082601) cytosolic glyceraldehyde-3-phosphate dehydrogenase [Leavenworthia stylosa] Length = 125 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): ________________________________________ __________________________________________________ Database sequence: | | | | 125 0 50 100 Plus Strand HSPs: Score = 434 (152.8 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45 Identities = 87/99 (87%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSS GAAKAVGKVLP+LNGKLTGMSFRVPTVDVSVVDLTVR+ K ATY++IK AIK Sbjct: 11 FNIIPSSIGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRIEKAATYDEIKKAIK 70 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGY+E DVVSTDFVGDNRSSIFDA+AGI+ Sbjct: 71 EESEGKLKGILGYSEDDVVSTDFVGDNRSSIFDAKAGIA 109 Score = 65 (22.9 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45 Identities = 11/14 (78%), Positives = 13/14 (92%), Frame = +3 Query: 300 LNDNFVKLVSWYDN 341 L+D FVKLV+WYDN Sbjct: 110 LSDKFVKLVAWYDN 123
>gi|2078298|gb|AAB54003.1| (U97257) glyceraldehyde 3-phosphate dehydrogenase [Lycopersicon esculentum] Length = 294 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): __________________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | | | | 294 0 50 100 150 200 250 Plus Strand HSPs: Score = 430 (151.4 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45 Identities = 87/99 (87%), Positives = 93/99 (93%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT DVSVVDLTVRL K A+YE IK+AIK Sbjct: 164 FNIIPSSTGAAKAVGKVLPQLNGKLTGMAFRVPTADVSVVDLTVRLEKEASYEDIKAAIK 223 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ Sbjct: 224 EESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIA 262 Score = 68 (23.9 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45 Identities = 12/17 (70%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ NFVK+VSWYDN G Sbjct: 263 LSKNFVKVVSWYDNEWG 279 Score = 41 (14.4 bits), Expect = 5.2e-42, Sum P(2) = 5.2e-42 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 278 WGYSSRV 284
>gi|462140|sp|P34924|G3PC_PINSY GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|7431525|pir||T09663 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) GapC1 - Scotch pine >gi|169386|gb|AAA33779.1| (L07501) glyceraldehyde-3-phosphate dehydrogenase [Pinus sylvestris] Length = 340 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 340 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 8..19 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 85..130 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 151..185 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 188..242 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 312..332 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 157 Entrez active site: ACTIVATES THIOL GROUP DURIN 184 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 5..340 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 116..129 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 151..169 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 178..194 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 235..252 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 275..290 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 7..37 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 46..122 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 124..160 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 162..256 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 259..336 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 155..162 __________________ Plus Strand HSPs: Score = 420 (147.8 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45 Identities = 85/99 (85%), Positives = 92/99 (92%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPT DVSVVDLTVRL K ATY++IK+AIK Sbjct: 209 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKSATYDEIKAAIK 268 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 ESEG LKGILGYTE VVSTDF+GD+RSSIFDAQAGI+ Sbjct: 269 AESEGNLKGILGYTEDAVVSTDFIGDSRSSIFDAQAGIA 307 Score = 78 (27.5 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+DNFVKLVSWYDN G Sbjct: 308 LSDNFVKLVSWYDNEWG 324 Score = 41 (14.4 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 323 WGYSSRV 329
>gi|120672|sp|P26519|G3PC_PETCR GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66016|pir||DEPZG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - parsley >gi|20549|emb|CAA42902.1| (X60344) glyceraldehyde 3-phosphate dehydrogenase [Petroselinum crispum] Length = 336 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 336 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 4..15 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 81..126 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 147..181 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 184..238 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 308..328 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 153 Entrez active site: ACTIVATES THIOL GROUP DURIN 180 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..336 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 112..125 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 147..165 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 174..190 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 231..248 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 271..286 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 3..33 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 42..118 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 120..156 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 158..251 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 255..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 151..158 __________________ Plus Strand HSPs: Score = 420 (147.8 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44 Identities = 85/99 (85%), Positives = 92/99 (92%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLT RL K ATY++IK+AIK Sbjct: 205 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTARLEKAATYDEIKAAIK 264 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 ESE LKGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ Sbjct: 265 HESETSLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIA 303 Score = 73 (25.7 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVK+VSWYDN G Sbjct: 304 LNGNFVKVVSWYDNEWG 320 Score = 38 (13.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 319 WGYSNRV 325
>gi|3023816|sp|Q42977|G3PC_ORYSA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|968996|gb|AAA82047.1| (U31676) glyceraldehyde-3-phosphate dehydrogenase [Oryza sativa] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 412 (145.0 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44 Identities = 83/99 (83%), Positives = 91/99 (91%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K A+Y+ IKSAIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEGKLKGI+GY E D+VSTDFVGD+RSSIFDA+AGI+ Sbjct: 266 SASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIA 304 Score = 80 (28.2 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLV+WYDN G Sbjct: 305 LNDNFVKLVAWYDNEWG 321 Score = 38 (13.4 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSNRV 326
>gi|82695|pir||PQ0179 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 3 - maize (fragment) >gi|293887|gb|AAA33465.1| (L13431) glyceraldehyde-3-phosphate dehydrogenase [Zea mays] Length = 234 Frame 3 hits (HSPs): _____ Frame 2 hits (HSPs): ______________________ Frame 1 hits (HSPs): __ Annotated Domains: __ __________________________________________________ Database sequence: | | | | | | 234 0 50 100 150 200 __________________ Annotated Domains: PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 49..56 __________________ Plus Strand HSPs: Score = 412 (145.0 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 82/99 (82%), Positives = 91/99 (91%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK+A+K Sbjct: 103 FNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVK 162 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 E+EG LKGILGY E D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 163 AEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIA 201 Score = 76 (26.8 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 202 LNGNFVKLVSWYDNEWG 218 Score = 38 (13.4 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 217 WGYSTRV 223
>gi|6166167|sp|Q43247|G3PE_MAIZE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC 3 >gi|7431534|pir||T02722 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) GAPC3, cytosolic - maize >gi|1184774|gb|AAA87579.1| (U45856) cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 [Zea mays] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: Entrez Domain: BINDING TO NAD. 1..151 Entrez Domain: CATALYTIC. 152..337 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..253 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 256..332 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 412 (145.0 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 82/99 (82%), Positives = 91/99 (91%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK+A+K Sbjct: 206 FNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 E+EG LKGILGY E D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 266 AEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIA 304 Score = 76 (26.8 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 305 LNGNFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSTRV 326
>gi|7431535|pir||T02723 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) GAPC4 - maize >gi|1184776|gb|AAA87580.1| (U45857) cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC4 [Zea mays] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 337 0 150 300 Plus Strand HSPs: Score = 412 (145.0 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 82/99 (82%), Positives = 91/99 (91%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK+A+K Sbjct: 206 FNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 E+EG LKGILGY E D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 266 AEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIA 304 Score = 76 (26.8 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 305 LNGNFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSTRV 326
>gi|120680|sp|P26517|G3PX_HORVU GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66010|pir||DEBHG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - barley >gi|18978|emb|CAA42901.1| (X60343) glyceraldehyde 3-phosphate dehydrogenase [Hordeum vulgare] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 406 (142.9 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43 Identities = 82/99 (82%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR K A+Y+ IK AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRTEKAASYDDIKKAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEGKLKGI+GY E D+VSTDFVGD+RSSIFDA+AGI+ Sbjct: 266 AASEGKLKGIMGYVEEDLVSTDFVGDSRSSIFDAKAGIA 304 Score = 78 (27.5 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+FVKLVSWYDN G Sbjct: 305 LNDHFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSNRV 326
>gi|3023814|sp|Q42671|G3PC_CRAPL GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|542093|pir||S42479 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), cytosolic - Craterostigma plantagineum >gi|460979|emb|CAA55116.1| (X78307) glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [Craterostigma plantagineum] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..333 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 423 (148.9 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43 Identities = 85/99 (85%), Positives = 94/99 (94%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTVDVSVVDLTV L K A+Y++IK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTVDVSVVDLTVTLAKEASYDEIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVS+DFVGD+RSSIFDA+AGI+ Sbjct: 266 EESEGKLKGILGYTEEDVVSSDFVGDSRSSIFDAKAGIA 304 Score = 60 (21.1 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43 Identities = 10/17 (58%), Positives = 13/17 (76%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ FVK+V+WYDN G Sbjct: 305 LSKKFVKIVAWYDNEWG 321 Score = 41 (14.4 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 320 WGYSSRV 326
>gi|82694|pir||PQ0178 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 2 - maize (fragment) >gi|293889|gb|AAA33466.1| (L13432) glyceraldehyde-3-phosphate dehydrogenase [Zea mays] Length = 247 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _____________________ Frame 1 hits (HSPs): __ Annotated Domains: __ __________________________________________________ Database sequence: | | | | | | 247 0 50 100 150 200 __________________ Annotated Domains: PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 62..69 __________________ Plus Strand HSPs: Score = 403 (141.9 bits), Expect = 5.9e-43, Sum P(2) = 5.9e-43 Identities = 81/99 (81%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K A+YE+IK AIK Sbjct: 116 FNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEEIKKAIK 175 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG LKGI+GY E D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 176 AASEGPLKGIMGYVEEDLVSTDFTGDSRSSIFDAKAGIA 214 Score = 77 (27.1 bits), Expect = 5.9e-43, Sum P(2) = 5.9e-43 Identities = 13/17 (76%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+F+KLVSWYDN G Sbjct: 215 LNDHFIKLVSWYDNEWG 231 Score = 38 (13.4 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 230 WGYSNRV 236
>gi|6016075|sp|Q09054|G3PD_MAIZE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC 2 >gi|312179|emb|CAA51676.1| (X73151) glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [Zea mays] >gi|1184772|gb|AAA87578.1| (U45855) cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC2 [Zea mays] >gi|1185554|gb|AAA87880.1| (U45858) glyceraldehyde-3-phosphate dehydrogenase [Zea mays] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: Entrez Domain: BINDING TO NAD. 1..151 Entrez Domain: CATALYTIC. 152..337 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 403 (141.9 bits), Expect = 5.9e-43, Sum P(2) = 5.9e-43 Identities = 81/99 (81%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K A+YE+IK AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEEIKKAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG LKGI+GY E D+VSTDF GD+RSSIFDA+AGI+ Sbjct: 266 AASEGPLKGIMGYVEEDLVSTDFTGDSRSSIFDAKAGIA 304 Score = 77 (27.1 bits), Expect = 5.9e-43, Sum P(2) = 5.9e-43 Identities = 13/17 (76%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+F+KLVSWYDN G Sbjct: 305 LNDHFIKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSNRV 326
>gi|66009|pir||DEZMGC glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) C, cytosolic - maize >gi|22238|emb|CAA30151.1| (X07156) GADPH (AA 1-337) [Zea mays] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: ______ __ _ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: Entrez region: beta-alpha-beta NAD nucleotide-b 5..35 Entrez active site: Cys, His 154 Entrez active site: Cys, His 181 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 401 (141.2 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 81/99 (81%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K A+YE IK AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEDIKKAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG LKGI+GY E D+VSTDF+GD+RSSIFDA+AGI+ Sbjct: 266 AASEGPLKGIMGYVEEDLVSTDFLGDSRSSIFDAKAGIA 304 Score = 78 (27.5 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+FVKLVSWYDN G Sbjct: 305 LNDHFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSNRV 326
>gi|120670|sp|P08735|G3PC_MAIZE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC 1 >gi|100879|pir||S06879 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) C - maize >gi|295853|emb|CAA33620.1| (X15596) GAPDH [Zea mays] Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez Domain: BINDING TO NAD. 1..151 Entrez Domain: CATALYTIC. 152..337 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..334 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 401 (141.2 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 81/99 (81%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+ K A+YE IK AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEDIKKAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG LKGI+GY E D+VSTDF+GD+RSSIFDA+AGI+ Sbjct: 266 AASEGPLKGIMGYVEEDLVSTDFLGDSRSSIFDAKAGIA 304 Score = 78 (27.5 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND+FVKLVSWYDN G Sbjct: 305 LNDHFVKLVSWYDNEWG 321 Score = 38 (13.4 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 320 WGYSNRV 326
>gi|120666|sp|P25861|G3PC_ANTMA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|66012|pir||DESKG glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - garden snapdragon Length = 337 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ____________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 5..16 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 82..127 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 148..182 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 185..239 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 309..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 154 Entrez active site: ACTIVATES THIOL GROUP DURIN 181 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..337 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 113..126 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 148..166 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 175..191 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 232..249 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 272..287 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 4..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..119 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 121..157 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 159..252 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 256..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 152..159 __________________ Plus Strand HSPs: Score = 450 (158.4 bits), Expect = 1.5e-41, P = 1.5e-41 Identities = 99/131 (75%), Positives = 105/131 (80%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATYEQIK+AIK Sbjct: 206 FNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRLEKKATYEQIKAAIK 265 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*QLCXTCFLV*QXNGVTVP 361 EESEGKLKGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ G + Sbjct: 266 EESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTR 325 Query: 362 VLIDLIVPFAS 394 V +DLIV AS Sbjct: 326 V-VDLIVHMAS 335 Score = 83 (29.2 bits), Expect = 2.9, P = 0.94 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 305 LNDNFVKLVSWYDNEWG 321
>gi|1345501|emb|CAA42103.1| (X59517) glycolytic glyceraldehyde 3-phosphate dehydrogenase [Antirrhinum majus] Length = 336 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | 336 0 150 300 Plus Strand HSPs: Score = 450 (158.4 bits), Expect = 1.5e-41, P = 1.5e-41 Identities = 99/131 (75%), Positives = 105/131 (80%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVRL K ATYEQIK+AIK Sbjct: 205 FNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRLEKKATYEQIKAAIK 264 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*QLCXTCFLV*QXNGVTVP 361 EESEGKLKGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ G + Sbjct: 265 EESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTR 324 Query: 362 VLIDLIVPFAS 394 V +DLIV AS Sbjct: 325 V-VDLIVHMAS 334 Score = 83 (29.2 bits), Expect = 2.8, P = 0.94 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 304 LNDNFVKLVSWYDNEWG 320
>gi|3023812|sp|Q39769|G3PC_GINBI GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|435046|gb|AAA33352.1| (L26924) glyceraldehyde-phosphate dehydrogenase [Ginkgo biloba] Length = 340 Frame 2 hits (HSPs): ____________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 340 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 8..19 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 85..130 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 151..185 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 188..242 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 312..332 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 157 Entrez active site: ACTIVATES THIOL GROUP DURIN 184 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 5..340 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 116..129 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 151..169 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 178..194 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 235..252 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 275..290 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 7..37 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 46..122 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 124..160 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 162..255 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 260..336 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 155..162 __________________ Plus Strand HSPs: Score = 447 (157.4 bits), Expect = 3.2e-41, P = 3.2e-41 Identities = 97/131 (74%), Positives = 106/131 (80%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPT DVSVVDLTVRL KPA+Y++IK+AIK Sbjct: 209 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKAAIK 268 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*QLCXTCFLV*QXNGVTVP 361 EESEGKLKGILGYTE DVVSTDF+GDNRSSIFDA+AGI+ G + Sbjct: 269 EESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSR 328 Query: 362 VLIDLIVPFAS 394 V IDLIV AS Sbjct: 329 V-IDLIVHMAS 338
>gi|120703|sp|P26988|G3P_PHYIN GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH) >gi|65998|pir||DEJNGI glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Phytophthora infestans Length = 332 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 332 0 150 300 __________________ Annotated Domains: DOMO DM00113: GLYCERALDEHYDE-3-PHOSPHATEDEHYD 1..329 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 149 Entrez active site: ACTIVATES THIOL GROUP DURIN 176 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..332 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 108..121 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 143..161 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 170..186 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 227..244 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 267..282 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 1..31 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 40..114 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 116..152 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 154..245 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 252..329 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 147..154 __________________ Plus Strand HSPs: Score = 391 (137.6 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41 Identities = 76/99 (76%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKV+P+LNGKLTGMSFRVPT DVSVVDLT RL PA+Y++IK+AIK Sbjct: 201 FNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTADVSVVDLTARLVNPASYDEIKAAIK 260 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SE ++KGILGYTE VVS+DF+GD+ SSIFDA+AGI+ Sbjct: 261 SASENEMKGILGYTEKAVVSSDFIGDSHSSIFDAEAGIA 299 Score = 72 (25.3 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L D+FVKLVSWYDN G Sbjct: 300 LTDDFVKLVSWYDNEWG 316 Score = 41 (14.4 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 315 WGYSSRV 321
>gi|462138|sp|P34922|G3PC_PEA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC >gi|7431538|pir||T06781 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - garden pea >gi|169091|gb|AAA33667.1| (L07500) glyceraldehyde-3-phosphate dehydrogenase [Pisum sativum] >gi|1345567|emb|CAA51675.1| (X73150) glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [Pisum sativum] Length = 338 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ____________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 338 0 150 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 155 Entrez active site: ACTIVATES THIOL GROUP DURIN 182 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 3..338 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 114..127 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 149..167 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 176..192 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 233..250 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 273..288 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 5..35 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 44..120 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 122..158 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 160..253 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 257..335 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 153..160 __________________ Plus Strand HSPs: Score = 446 (157.0 bits), Expect = 4.0e-41, P = 4.0e-41 Identities = 96/132 (72%), Positives = 106/132 (80%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL K ATY++IK+AIK Sbjct: 207 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKAAIK 266 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*QLCXTCFLV*QXNGVTVP 361 EESEGKLKGILGYTE DVVSTDF+GD RSSIFDA+AGI+ + G + Sbjct: 267 EESEGKLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDKFVKLVSWYDNELGYSTR 326 Query: 362 VLIDLIVPFASR 397 V +DLIV A + Sbjct: 327 V-VDLIVHIAKQ 337 Score = 80 (28.2 bits), Expect = 6.8, P = 1.0 Identities = 14/17 (82%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LND FVKLVSWYDN +G Sbjct: 306 LNDKFVKLVSWYDNELG 322
>gi|5678779|gb|AAD46735.1| (AF136119) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678780|gb|AAD46736.1| (AF136120) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678781|gb|AAD46737.1| (AF136121) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678782|gb|AAD46738.1| (AF136122) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678783|gb|AAD46739.1| (AF136123) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678784|gb|AAD46740.1| (AF136124) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678785|gb|AAD46741.1| (AF136125) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678786|gb|AAD46742.1| (AF136126) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678787|gb|AAD46743.1| (AF136127) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678788|gb|AAD46744.1| (AF136128) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678789|gb|AAD46745.1| (AF136129) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678790|gb|AAD46746.1| (AF136130) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678791|gb|AAD46747.1| (AF136131) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678792|gb|AAD46748.1| (AF136132) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678793|gb|AAD46749.1| (AF136133) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678794|gb|AAD46750.1| (AF136134) glyceraldehyde 3-phosphate dehydrogenase [Manihot pruinosa] >gi|5678795|gb|AAD46751.1| (AF136135) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678796|gb|AAD46752.1| (AF136136) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678797|gb|AAD46753.1| (AF136137) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678798|gb|AAD46754.1| (AF136138) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678799|gb|AAD46755.1| (AF136139) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678800|gb|AAD46756.1| (AF136140) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678802|gb|AAD46758.1| (AF136142) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678803|gb|AAD46759.1| (AF136143) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678804|gb|AAD46760.1| (AF136144) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678805|gb|AAD46761.1| (AF136145) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678806|gb|AAD46762.1| (AF136146) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678807|gb|AAD46763.1| (AF136147) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678808|gb|AAD46764.1| (AF136148) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] >gi|5678809|gb|AAD46765.1| (AF136149) glyceraldehyde 3-phosphate dehydrogenase [Manihot esculenta] Length = 137 Frame 2 hits (HSPs): _____________________________________ __________________________________________________ Database sequence: | | | | 137 0 50 100 Plus Strand HSPs: Score = 445 (156.6 bits), Expect = 5.2e-41, P = 5.2e-41 Identities = 90/99 (90%), Positives = 96/99 (96%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRL K ATYE+IK+AIK Sbjct: 39 FNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKKATYEEIKNAIK 98 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 EESEGKLKGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ Sbjct: 99 EESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIA 137
>gi|232118|sp|P29497|G3P_COCHE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH) >gi|283325|pir||S26946 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - fungus (Cochliobolus heterostrophus) >gi|2582|emb|CAA45084.1| (X63516) glyceraldehyde 3-phosphate dehydrogenase [Cochliobolus heterostrophus] Length = 337 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 151 Entrez active site: ACTIVATES THIOL GROUP DURIN 178 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..336 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 110..123 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 145..163 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 172..188 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 229..246 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 269..284 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 3..33 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..116 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 118..154 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 156..249 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 254..332 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 149..156 __________________ Plus Strand HSPs: Score = 383 (134.8 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 76/98 (77%), Positives = 86/98 (87%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKV+P LNGKLTGM+ RVPT +VSVVDLTVR+ K A+Y++IK A+KE Sbjct: 204 NIIPSSTGAAKAVGKVIPELNGKLTGMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKE 263 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG L GILGYTE D+VSTD GDNRSSIFDA+AGIS Sbjct: 264 ASEGSLNGILGYTEDDIVSTDLNGDNRSSIFDAKAGIS 301 Score = 76 (26.8 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 302 LNKNFVKLVSWYDNEWG 318 Score = 36 (12.7 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36 Identities = 6/7 (85%), Positives = 6/7 (85%), Frame = +1 Query: 346 WGYSSRV 366 WGYS RV Sbjct: 317 WGYSRRV 323
>gi|101739|pir||S22150 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - fungus (Cochliobolus heterostrophus) Length = 337 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _______________ Frame 1 hits (HSPs): __ Annotated Domains: __ __________________________________________________ Database sequence: | | | | 337 0 150 300 __________________ Annotated Domains: PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 149..156 __________________ Plus Strand HSPs: Score = 383 (134.8 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 76/98 (77%), Positives = 86/98 (87%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKV+P LNGKLTGM+ RVPT +VSVVDLTVR+ K A+Y++IK A+KE Sbjct: 204 NIIPSSTGAAKAVGKVIPELNGKLTGMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKE 263 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG L GILGYTE D+VSTD GDNRSSIFDA+AGIS Sbjct: 264 ASEGSLNGILGYTEDDIVSTDLNGDNRSSIFDAKAGIS 301 Score = 76 (26.8 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 14/17 (82%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NFVKLVSWYDN G Sbjct: 302 LNKNFVKLVSWYDNEWG 318 Score = 36 (12.7 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36 Identities = 6/7 (85%), Positives = 6/7 (85%), Frame = +1 Query: 346 WGYSSRV 366 WGYS RV Sbjct: 317 WGYSRRV 323
>gi|729550|sp|P06977|G3P1_ECOLI GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A (GAPDH-A) >gi|66017|pir||DEECG3 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) A - Escherichia coli >gi|41539|emb|CAA26498.1| (X02662) put. GAPDH (aa 1-332) [Escherichia coli] >gi|1742897|dbj|BAA15576.1| (D90821) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) A [Escherichia coli] >gi|1788079|gb|AAC74849.1| (AE000273) glyceraldehyde-3-phosphate dehydrogenase A [Escherichia coli K12] >gi|12515813|gb|AAG56768.1|AE005401_3 (AE005401) glyceraldehyde-3-phosphate dehydrogenase A [Escherichia coli O157:H7] Length = 331 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 331 0 150 300 __________________ Annotated Domains: BLOCKS BL00071A: Glyceraldehyde 3-phosphate deh 3..14 BLOCKS BL00071B: Glyceraldehyde 3-phosphate deh 77..122 BLOCKS BL00071C: Glyceraldehyde 3-phosphate deh 143..177 BLOCKS BL00071D: Glyceraldehyde 3-phosphate deh 180..234 BLOCKS BL00071E: Glyceraldehyde 3-phosphate deh 304..324 Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 150 Entrez active site: ACTIVATES THIOL GROUP DURIN 177 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 1..330 PRINTS G3PDHDRGNASE1: Glyceraldehyde-3-phosphat 108..121 PRINTS G3PDHDRGNASE2: Glyceraldehyde-3-phosphat 143..161 PRINTS G3PDHDRGNASE3: Glyceraldehyde-3-phosphat 170..186 PRINTS G3PDHDRGNASE4: Glyceraldehyde-3-phosphat 227..244 PRINTS G3PDHDRGNASE5: Glyceraldehyde-3-phosphat 267..282 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 2..36 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 40..114 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 116..152 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 154..247 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 251..329 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 148..155 __________________ Plus Strand HSPs: Score = 376 (132.4 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 75/98 (76%), Positives = 88/98 (89%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT +VSVVDLTVRL K ATYEQIK+A+K Sbjct: 203 NIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKA 262 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 +EG++KG+LGYTE DVVSTDF G+ +S+FDA+AGI+ Sbjct: 263 AAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 300 Score = 83 (29.2 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 301 LNDNFVKLVSWYDNETG 317
>gi|468157|gb|AAC43271.1| (U07750) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468159|gb|AAC43272.1| (U07751) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468161|gb|AAC43273.1| (U07752) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468163|gb|AAC43274.1| (U07754) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468183|gb|AAC43284.1| (U07765) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468185|gb|AAC43285.1| (U07768) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468187|gb|AAC43286.1| (U07769) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468189|gb|AAC43287.1| (U07770) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468191|gb|AAC43288.1| (U07771) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468193|gb|AAC43289.1| (U07772) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] >gi|468195|gb|AAC43290.1| (U07773) glyceraldehyde 3-phosphate dehydrogenase [Escherichia coli] Length = 312 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | | | 312 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 376 (132.4 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 75/98 (76%), Positives = 88/98 (89%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT +VSVVDLTVRL K ATYEQIK+A+K Sbjct: 194 NIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKA 253 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 +EG++KG+LGYTE DVVSTDF G+ +S+FDA+AGI+ Sbjct: 254 AAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 291 Score = 83 (29.2 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 292 LNDNFVKLVSWYDNETG 308
>gi|10120771|pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes >gi|10120772|pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes >gi|10120775|pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes >gi|10120776|pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes >gi|10120777|pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes. >gi|10120778|pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes. >gi|1421424|pdb|1GAD|O Chain O, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered: Yes; Other_details: Wild Type, Holo Form >gi|1421425|pdb|1GAD|P Chain P, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered: Yes; Other_details: Wild Type, Holo Form Length = 330 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 330 0 150 300 Plus Strand HSPs: Score = 376 (132.4 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 75/98 (76%), Positives = 88/98 (89%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT +VSVVDLTVRL K ATYEQIK+A+K Sbjct: 202 NIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKA 261 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 +EG++KG+LGYTE DVVSTDF G+ +S+FDA+AGI+ Sbjct: 262 AAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 299 Score = 83 (29.2 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 300 LNDNFVKLVSWYDNETG 316
>gi|1736407|dbj|BAA18884.1| (D90822) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) A [Escherichia coli] Length = 303 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | || 303 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 376 (132.4 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 75/98 (76%), Positives = 88/98 (89%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT +VSVVDLTVRL K ATYEQIK+A+K Sbjct: 175 NIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKA 234 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 +EG++KG+LGYTE DVVSTDF G+ +S+FDA+AGI+ Sbjct: 235 AAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 272 Score = 83 (29.2 bits), Expect = 9.5e-41, Sum P(2) = 9.5e-41 Identities = 15/17 (88%), Positives = 15/17 (88%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LNDNFVKLVSWYDN G Sbjct: 273 LNDNFVKLVSWYDNETG 289
>gi|2266741|emb|CAA45835.1| (X64537) triosephosphate isomerase + glyceraldehyde-3-phosphate dehydrogenase [Phytophthora infestans] Length = 589 Frame 3 hits (HSPs): __ Frame 2 hits (HSPs): __________ Frame 1 hits (HSPs): _ __________________________________________________ Database sequence: | | | | | 589 0 150 300 450 Plus Strand HSPs: Score = 391 (137.6 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40 Identities = 76/99 (76%), Positives = 89/99 (89%), Frame = +2 Query: 2 FNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIK 181 FNIIPSSTGAAKAVGKV+P+LNGKLTGMSFRVPT DVSVVDLT RL PA+Y++IK+AIK Sbjct: 458 FNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTADVSVVDLTARLVNPASYDEIKAAIK 517 Query: 182 EESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SE ++KGILGYTE VVS+DF+GD+ SSIFDA+AGI+ Sbjct: 518 SASENEMKGILGYTEKAVVSSDFIGDSHSSIFDAEAGIA 556 Score = 72 (25.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40 Identities = 13/17 (76%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L D+FVKLVSWYDN G Sbjct: 557 LTDDFVKLVSWYDNEWG 573 Score = 41 (14.4 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37 Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYSSRV Sbjct: 572 WGYSSRV 578
>gi|6016073|sp|O43026|G3P2_SCHPO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 2 (GAPDH) >gi|7490595|pir||T40292 glyceraldehyde 3-phosphate dehydrogenase - fission yeast (Schizosaccharomyces pombe) >gi|2950462|emb|CAA17812.1| (AL022071) glyceraldehyde 3-phosphate dehydrogenase [Schizosaccharomyces pombe] Length = 335 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 335 0 150 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 152 Entrez active site: ACTIVATES THIOL GROUP DURIN 179 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..335 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 5..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..117 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 119..155 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 157..250 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 255..331 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 150..157 __________________ Plus Strand HSPs: Score = 393 (138.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40 Identities = 79/102 (77%), Positives = 85/102 (83%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKV+PALNGKLTGM+FRVPT DVSVVDLTV+L KP YE IK+AIK Sbjct: 205 NIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKA 264 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*Q 310 SEG +KG+LGYTE VVSTDF GDN SSIFDA AGI Q Sbjct: 265 ASEGPMKGVLGYTEDSVVSTDFCGDNHSSIFDASAGIQLSPQ 306 Score = 65 (22.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40 Identities = 12/17 (70%), Positives = 13/17 (76%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ FVKLVSWYDN G Sbjct: 303 LSPQFVKLVSWYDNEWG 319 Score = 36 (12.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37 Identities = 6/7 (85%), Positives = 6/7 (85%), Frame = +1 Query: 346 WGYSSRV 366 WGYS RV Sbjct: 318 WGYSHRV 324
>gi|3059122|emb|CAA06030.1| (AJ003783) glyeraldehyde-3-phosphate dehydrogenase [Marsilea quadrifolia] Length = 368 Frame 3 hits (HSPs): ___ Frame 2 hits (HSPs): ______________ Frame 1 hits (HSPs): __ __________________________________________________ Database sequence: | | | | 368 0 150 300 Plus Strand HSPs: Score = 387 (136.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40 Identities = 77/98 (78%), Positives = 88/98 (89%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPT +VSVVDLT RL K A+Y+ +K+A+K Sbjct: 232 NIIPSSTGAAKAVGKVLPQLNGKLTGMAFRVPTPNVSVVDLTCRLEKGASYDDVKAAVKA 291 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGIS 298 SEG +KGILGYTE DVVSTDFVGD+RSSIFDA+AGI+ Sbjct: 292 ASEGSMKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIA 329 Score = 70 (24.6 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40 Identities = 11/17 (64%), Positives = 14/17 (82%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 LN NF+K+V+WYDN G Sbjct: 330 LNKNFIKMVTWYDNEWG 346 Score = 38 (13.4 bits), Expect = 3.5e-37, Sum P(2) = 3.5e-37 Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +1 Query: 346 WGYSSRV 366 WGYS+RV Sbjct: 345 WGYSNRV 351
>gi|2494642|sp|P78958|G3P1_SCHPO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 (GAPDH) >gi|7490594|pir||T40235 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) [imported] - fission yeast (Schizosaccharomyces pombe) >gi|1835252|emb|CAA59681.1| (X85332) glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [Schizosaccharomyces pombe] >gi|3192043|emb|CAA19372.1| (AL023796) glyceraldehyde 3-phosphate dehydrogenase 1 [Schizosaccharomyces pombe] Length = 336 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): ________________ Frame 1 hits (HSPs): __ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 336 0 150 300 __________________ Annotated Domains: Entrez binding site: GLYCERALDEHYDE 3-PHOSPHATE 152 Entrez active site: ACTIVATES THIOL GROUP DURIN 179 PFAM gpdh: glyceraldehyde 3-phosphate dehydro 2..336 PRODOM PD000269: G3P(69) G3PC(23) G3P2(13) 5..34 PRODOM PD000255: G3P(69) G3PC(23) G3P1(14) 43..117 PRODOM PD000250: G3P(69) G3PC(23) G3P1(13) 119..155 PRODOM PD000244: G3P(69) G3PC(23) G3P1(13) 157..250 PRODOM PD000248: G3P(69) G3PC(23) G3P2(13) 255..331 PROSITE GAPDH: Glyceraldehyde 3-phosphate dehydr 150..157 __________________ Plus Strand HSPs: Score = 391 (137.6 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40 Identities = 79/102 (77%), Positives = 85/102 (83%), Frame = +2 Query: 5 NIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLXKPATYEQIKSAIKE 184 NIIPSSTGAAKAVGKV+PALNGKLTGM+FRVPT DVSVVDLTV+L KP YE IK+AIK Sbjct: 205 NIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKA 264 Query: 185 ESEGKLKGILGYTEXDVVSTDFVGDNRSSIFDAQAGISFE*Q 310 SEG +KG+LGYTE VVSTDF GDN SSIFDA AGI Q Sbjct: 265 ASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQ 306 Score = 65 (22.9 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40 Identities = 12/17 (70%), Positives = 13/17 (76%), Frame = +3 Query: 300 LNDNFVKLVSWYDNXMG 350 L+ FVKLVSWYDN G Sbjct: 303 LSPQFVKLVSWYDNEWG 319 Score = 36 (12.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37 Identities = 6/7 (85%), Positives = 6/7 (85%), Frame = +1 Query: 346 WGYSSRV 366 WGYS RV Sbjct: 318 WGYSRRV 324 WARNING: HSPs involving 454 database sequences were not reported due to the limiting value of parameter B = 50. Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.90 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.357 0.160 0.553 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.331 0.146 0.439 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.366 0.166 0.752 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.338 0.148 0.484 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.333 0.142 0.449 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.161 0.613 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 159 149 10. 74 3 12 22 0.092 34 30 0.12 36 +2 0 160 151 10. 74 3 12 22 0.093 34 30 0.12 36 +1 0 160 149 10. 74 3 12 22 0.092 34 30 0.12 36 -1 0 160 149 10. 74 3 12 22 0.092 34 30 0.12 36 -2 0 160 147 10. 74 3 12 22 0.12 33 30 0.11 36 -3 0 159 146 10. 74 3 12 22 0.12 33 30 0.11 36 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 504 No. of states in DFA: 596 (59 KB) Total size of DFA: 172 KB (192 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 139.31u 1.21s 140.52t Elapsed: 00:00:24 Total cpu time: 139.36u 1.24s 140.60t Elapsed: 00:00:24 Start: Mon Oct 1 23:12:09 2001 End: Mon Oct 1 23:12:33 2001 WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000