BLASTP 2.0.8 [Jan-05-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YIR027C DAL1, Chr IX from 406257-407639, reverse complement (460 letters) Database: nr 361,503 sequences; 110,384,460 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|728828|sp|P32375|ALLA_YEAST ALLANTOINASE >gi|630082|pir||S48... 949 0.0 gi|171366 (M69294) alantoinase [Saccharomyces cerevisiae] 904 0.0 gi|728827|sp|P40757|ALLA_RANCA ALLANTOINASE PRECURSOR >gi|45812... 329 2e-89 gi|627281|pir||A53595 allantoinase (EC 3.5.2.5) precursor - bul... 325 4e-88 gi|2500037|sp|P77671|ALLA_ECOLI PUTATIVE ALLANTOINASE >gi|17731... 253 2e-66 gi|3121748|sp|O32137|ALLA_BACSU PUTATIVE ALLANTOINASE >gi|26357... 241 7e-63 gi|3122243|sp|P81006|HYDA_ARTAU D-HYDANTOINASE (DIHYDROPYRIMIDI... 162 3e-39 gi|3127836|emb|CAA18902| (AL023496) hypothetical protein [Strep... 146 4e-34 gi|3122649|sp|O27199|PYRC_METTH DIHYDROOROTASE (DHOASE) >gi|262... 127 2e-28 gi|3122249|sp|Q45515|HYDA_BACST D-HYDANTOINASE (DIHYDROPYRIMIDI... 126 3e-28 gi|1172784|sp|P46538|PYRC_BACCL DIHYDROOROTASE (DHOASE) >gi|211... 124 1e-27 gi|3123145|sp|Q46806|YGEZ_ECOLI HYPOTHETICAL 51.5 KD PROTEIN IN... 123 2e-27 gi|3914511|sp|O57740|PYRC_PYRHO DIHYDROOROTASE (DHOASE) >gi|325... 119 3e-26 gi|191364 (M28866) S-dihydroorotate amidohydrolase (DHOase) (EC... 117 2e-25 gi|3024509|sp|Q91437|PYR1_SQUAC CAD PROTEIN (CONTAINS: GLUTAMIN... 117 2e-25 gi|191173 (M33702) dihydroorotase synthetase complex (EC 3.5.2.... 117 2e-25 gi|1346930|sp|P48795|PYRC_LACLE DIHYDROOROTASE (DHOASE) >gi|108... 117 2e-25 gi|131696|sp|P08955|PYR1_MESAU CAD PROTEIN (CONTAINS: GLUTAMINE... 117 2e-25 gi|3122654|sp|P96081|PYRC_THEAQ DIHYDROOROTASE (DHOASE) >gi|168... 115 9e-25 gi|517425 (U09990) dihydro-orotase [Methanobacterium thermoauto... 114 1e-24 gi|2506025|dbj||AB007768_1 (AB007768) dihydroorotase [Rattus ra... 113 2e-24 gi|3334230|sp|Q59699|HYDA_PSEPU D-HYDANTOINASE (DIHYDROPYRIMIDI... 112 4e-24 gi|3914514|sp|O66990|PYRC_AQUAE DIHYDROOROTASE (DHOASE) >gi|298... 111 1e-23 gi|3122248|sp|Q44184|HYDA_AGRRD D-HYDANTOINASE (DIHYDROPYRIMIDI... 110 2e-23 gi|131715|sp|P25995|PYRC_BACSU DIHYDROOROTASE (DHOASE) >gi|2795... 109 5e-23 gi|1709955|sp|P27708|PYR1_HUMAN CAD PROTEIN (CONTAINS: GLUTAMIN... 108 7e-23 gi|3122658|sp|Q58885|PYRC_METJA DIHYDROOROTASE (DHOASE) >gi|212... 108 1e-22 gi|2500033|sp|P77884|PYRC_LACPL DIHYDROOROTASE (DHOASE) >gi|151... 104 1e-21 gi|3298139|gnl|PID|d1032316 (AB010284) dihydroorotase [Trypanos... 101 8e-21 gi|7331|emb|CAA32782| (X14634) PYR1-3B multifunctional enzyme (... 99 4e-20 gi|279582|pir||QZDOP3 pyrimidine synthesis protein PYR1-3 - sli... 99 4e-20 gi|400909|sp|P20054|PYR1_DICDI PROTEIN PYR1-3 (CONTAINS: GLUTAM... 99 4e-20 gi|3914520|sp|Q59712|PYR2_PSEPU DIHYDROOROTASE-LIKE PROTEIN (AS... 98 2e-19 gi|3875382|emb|CAA91059| (Z54284) similar to glutamine-dependen... 97 2e-19 gi|3914519|sp|Q51551|PYR2_PSEAE DIHYDROOROTASE-LIKE PROTEIN (AS... 96 4e-19 gi|3122032|sp|Q18677|DPY1_CAEEL HYPOTHETICAL 56.3 KD PROTEIN C4... 96 6e-19 gi|3122039|sp|Q63150|DPYS_RAT DIHYDROPYRIMIDINASE (DHPASE) (HYD... 94 2e-18 gi|3122049|sp|Q14117|DPYS_HUMAN DIHYDROPYRIMIDINASE (DHPASE) (H... 90 2e-17 gi|1621263|emb|CAB02642| (Z81011) pyrC [Mycobacterium tuberculo... 90 4e-17 gi|3122041|sp|O13022|DPY3_XENLA DIHYDROPYRIMIDINASE RELATED PRO... 83 5e-15 gi|3122036|sp|Q90635|DPY2_CHICK DIHYDROPYRIMIDINASE RELATED PRO... 82 6e-15 gi|2342488|gnl|PID|d1022745 (AB006714) dihydropyrimidinase rela... 82 6e-15 gi|1536909|emb|CAA69153| (Y07818) ULIP [Homo sapiens] 82 6e-15 gi|3122030|sp|P97427|DPY1_MOUSE DIHYDROPYRIMIDINASE RELATED PRO... 82 6e-15 gi|3122050|sp|Q14195|DPY3_HUMAN DIHYDROPYRIMIDINASE RELATED PRO... 82 1e-14 gi|3122017|sp|Q62950|DPY1_RAT DIHYDROPYRIMIDINASE RELATED PROTE... 82 1e-14 gi|1518520 (U52095) collapsin response mediator protein [Rattus... 82 1e-14 gi|1915915|emb|CAA70300| (Y09080) Ulip3 protein [Mus musculus] 82 1e-14 gi|3122052|sp|Q62188|DPY3_MOUSE DIHYDROPYRIMIDINASE RELATED PRO... 81 2e-14 gi|3122031|sp|Q14194|DPY1_HUMAN DIHYDROPYRIMIDINASE RELATED PRO... 80 3e-14 gi|3122018|sp|O02675|DPY2_BOVIN DIHYDROPYRIMIDINASE RELATED PRO... 79 5e-14 gi|3135671 (AF064070) putative dihydroorotase [Burkholderia pse... 78 1e-13 gi|1351260|sp|P47942|DPY2_RAT DIHYDROPYRIMIDINASE RELATED PROTE... 77 2e-13 gi|3122051|sp|Q16555|DPY2_HUMAN DIHYDROPYRIMIDINASE RELATED PRO... 77 3e-13 gi|2134933|pir||S58890 collapsin response mediator protein - hu... 76 5e-13 gi|3122033|sp|Q21773|DPY2_CAEEL HYPOTHETICAL 56.3 KD PROTEIN R0... 74 2e-12 gi|3122037|sp|Q62951|DPY4_RAT DIHYDROPYRIMIDINASE RELATED PROTE... 73 3e-12 gi|3122040|sp|O08553|DPY2_MOUSE DIHYDROPYRIMIDINASE RELATED PRO... 73 3e-12 gi|3914504|sp|O08357|PYRC_SULSO DIHYDROOROTASE (DHOASE) >gi|206... 72 7e-12 gi|3122044|sp|O35098|DPY4_MOUSE DIHYDROPYRIMIDINASE RELATED PRO... 71 1e-11 gi|401299|sp|Q01630|UN33_CAEEL UNC-33 PROTEIN >gi|539424|pir||S... 71 2e-11 gi|6901|emb|CAA78521| (Z14148) hypothetical polypeptide II [Cae... 71 2e-11 gi|6902|emb|CAA78522| (Z14148) hypothetical polypeptide III [Ca... 71 2e-11 gi|1945273|emb|CAA70299| (Y09079) Ulip4 protein [Mus musculus] 68 1e-10 gi|4337094|gb|AAD18071| (AF129814) carbamyl phosphate synthetas... 67 2e-10 gi|1946203|emb|CAA71872| (Y10976) cytosolic phosphoprotein [Hom... 67 3e-10 gi|3122042|sp|O14531|DPY4_HUMAN DIHYDROPYRIMIDINASE RELATED PRO... 66 4e-10 gi|8509|emb|CAA28502| (X04813) CAD protein (AA 1 - 2236) [Droso... 64 2e-09 gi|3915831|sp|P05990|PYR1_DROME CAD PROTEIN (RUDIMENTARY PROTEI... 64 2e-09 gi|3122038|sp|Q62952|DPY3_RAT DIHYDROPYRIMIDINASE RELATED PROTE... 63 3e-09 gi|3914507|sp|O28034|PYRC_ARCFU DIHYDROOROTASE (DHOASE) >gi|264... 59 9e-08 gi|1652025|gnl|PID|d1017684 (D90901) dihydroorotase [Synechocys... 51 2e-05 >gi|728828|sp|P32375|ALLA_YEAST ALLANTOINASE >gi|630082|pir||S48489 allantoinase (EC 3.5.2.5) - yeast (Saccharomyces cerevisiae) >gi|557833|emb|CAA86187| (Z38061) dal1, len: 460, CAI: 0.14, ALLA_YEAST P32375 ALLANTOINASE (EC 3.5.2.5) [Saccharomyces cerevisiae] >gi|763372 (Z47047) Dal1p [Saccharomyces cerevisiae] Length = 460 Score = 949 bits (2427), Expect = 0.0 Identities = 460/460 (100%), Positives = 460/460 (100%) Query: 1 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC 60 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC Sbjct: 1 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC 60 Query: 61 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL Sbjct: 61 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL Sbjct: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 Query: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN 240 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN Sbjct: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN 240 Query: 241 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR 300 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR Sbjct: 241 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR 300 Query: 301 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG 360 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG Sbjct: 301 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG 360 Query: 361 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY 420 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY Sbjct: 361 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY 420 Query: 421 NGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTLLDSRR 460 NGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTLLDSRR Sbjct: 421 NGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTLLDSRR 460 >gi|171366 (M69294) alantoinase [Saccharomyces cerevisiae] Length = 472 Score = 904 bits (2312), Expect = 0.0 Identities = 437/437 (100%), Positives = 437/437 (100%) Query: 1 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC 60 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC Sbjct: 1 MPINAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPC 60 Query: 61 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL Sbjct: 61 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL Sbjct: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 Query: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN 240 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN Sbjct: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARN 240 Query: 241 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR 300 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR Sbjct: 241 GPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIR 300 Query: 301 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG 360 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG Sbjct: 301 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG 360 Query: 361 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY 420 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY Sbjct: 361 CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAY 420 Query: 421 NGMTVKGTVLKTILRGQ 437 NGMTVKGTVLKTILRGQ Sbjct: 421 NGMTVKGTVLKTILRGQ 437 >gi|728827|sp|P40757|ALLA_RANCA ALLANTOINASE PRECURSOR >gi|458126 (U03471) allantoinase [Rana catesbeiana] Length = 484 Score = 329 bits (835), Expect = 2e-89 Identities = 173/408 (42%), Positives = 251/408 (61%), Gaps = 25/408 (6%) Query: 54 LENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNV 113 L +V ++ G++D HVH+NEPGRT WEG+ T T AA +GG+T +VDMPLN++PPTT+V Sbjct: 60 LLDVGDLVVMAGIIDPHVHVNEPGRTDWEGYRTATLAAAAGGITAIVDMPLNSLPPTTSV 119 Query: 114 ENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 NF KL+AA+ Q + DV FWGG++P N +LIP+++AGV GFK FL++SGV EFP + Sbjct: 120 TNFHTKLQAAKRQCYVDVAFWGGVIPDNQVELIPMLQAGVAGFKCFLINSGVPEFPHVSV 179 Query: 174 EYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLIL 233 + A+ L +++++FHAEL A + + + Y +FL SRPD EI A+ L+ Sbjct: 180 TDLHTAMSELQGTNSVLLFHAELEIAKPAPEIGDST--LYQTFLDSRPDDMEIAAVQLVA 237 Query: 234 ECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYF 293 + + HIVHL+S +++ +IRKA+ +G P+T ET HYL +++E IP GATYF Sbjct: 238 DLCQQYK---VRCHIVHLSSAQSLTIIRKAKEAGAPLTVETTHHYLSLSSEHIPPGATYF 294 Query: 294 KCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGL 353 KCCPP+R N++ LW+AL +G I VVSDHSPCTP+LK L++GD+ +WGGI+S+ GL Sbjct: 295 KCCPPVRGHRNKEALWNALLQGHIDMVVSDHSPCTPDLKLLKEGDYMKAWGGISSLQFGL 354 Query: 354 PLMF----TQGCSLVDIVTWCCKNTSHQVGLSHQK-------------GTIAPGYDADLV 396 PL + T+G SL D+ NT+ GL K G + + + Sbjct: 355 PLFWTSARTRGFSLTDVSQLLSSNTAKLCGLGIVKEPLKWVMMLIWSSGILTKSFRCKKM 414 Query: 397 VFDT-ASKHKISNSSVYFKNKLTAYNGMTV--KGTVLKTILRGQVVYT 441 +F T S I +S K+ L + G+ KG++L L +YT Sbjct: 415 IFITRISSPHIWDSFFKEKSWLLLFEGLLFISKGSMLPNQLENLFLYT 462 >gi|627281|pir||A53595 allantoinase (EC 3.5.2.5) precursor - bullfrog Length = 483 Score = 325 bits (824), Expect = 4e-88 Identities = 173/408 (42%), Positives = 251/408 (61%), Gaps = 26/408 (6%) Query: 54 LENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNV 113 L +V ++ G++D HVH+NEPGRT WEG+ T T AA +GG+T +VDMPLN++PPTT+V Sbjct: 60 LLDVGDLVVMAGIIDPHVHVNEPGRTDWEGYRTATLAA-AGGITAIVDMPLNSLPPTTSV 118 Query: 114 ENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 NF KL+AA+ Q + DV FWGG++P N +LIP+++AGV GFK FL++SGV EFP + Sbjct: 119 TNFHTKLQAAKRQCYVDVAFWGGVIPDNQVELIPMLQAGVAGFKCFLINSGVPEFPHVSV 178 Query: 174 EYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLIL 233 + A+ L +++++FHAEL A + + + Y +FL SRPD EI A+ L+ Sbjct: 179 TDLHTAMSELQGTNSVLLFHAELEIAKPAPEIGDSTL--YQTFLDSRPDDMEIAAVQLVA 236 Query: 234 ECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYF 293 + + HIVHL+S +++ +IRKA+ +G P+T ET HYL +++E IP GATYF Sbjct: 237 DLCQQYK---VRCHIVHLSSAQSLTIIRKAKEAGAPLTVETTHHYLSLSSEHIPPGATYF 293 Query: 294 KCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGL 353 KCCPP+R N++ LW+AL +G I VVSDHSPCTP+LK L++GD+ +WGGI+S+ GL Sbjct: 294 KCCPPVRGHRNKEALWNALLQGHIDMVVSDHSPCTPDLKLLKEGDYMKAWGGISSLQFGL 353 Query: 354 PLMF----TQGCSLVDIVTWCCKNTSHQVGLSHQK-------------GTIAPGYDADLV 396 PL + T+G SL D+ NT+ GL K G + + + Sbjct: 354 PLFWTSARTRGFSLTDVSQLLSSNTAKLCGLGIVKEPLKWVMMLIWSSGILTKSFRCKKM 413 Query: 397 VFDT-ASKHKISNSSVYFKNKLTAYNGMTV--KGTVLKTILRGQVVYT 441 +F T S I +S K+ L + G+ KG++L L +YT Sbjct: 414 IFITRISSPHIWDSFFKEKSWLLLFEGLLFISKGSMLPNQLENLFLYT 461 >gi|2500037|sp|P77671|ALLA_ECOLI PUTATIVE ALLANTOINASE >gi|1773192 (U82664) similar to S. cerevisiae dal1 [Escherichia coli] >gi|1786722 (AE000157) putative hydrolase [Escherichia coli] >gi|2735238 (U89279) GlxB3 [Escherichia coli] Length = 453 Score = 253 bits (639), Expect = 2e-66 Identities = 146/414 (35%), Positives = 227/414 (54%), Gaps = 22/414 (5%) Query: 56 NVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVEN 115 + S + PG+VD+H H++EPGR+ WEG+ETGT+AA GG+TT+++MPLN +P T + + Sbjct: 45 DASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRAS 104 Query: 116 FRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLL---DSGVE-EFPPI 171 +K +AA+G++ D GGLV +N+ L L + GV GFK F+ D G++ +F + Sbjct: 105 IELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDV 164 Query: 172 GKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHRE----YSSFLSSRPDSFEID 227 + + L E ++ H E A + E++ RE +++SRP E++ Sbjct: 165 NDWQFFKGAQKLGELGQPVLVHCE--NALICDELGEEAKREGRVTAHDYVASRPVFTEVE 222 Query: 228 AINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP 287 AI +L + +H+ H++S + + + +AR G VT E+C HY + +Q Sbjct: 223 AIRRVLYLAKVAG---CRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFE 279 Query: 288 DGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIA 347 + T KC PPIR N++G+W+ L G I +VSDHSPC PE+K G+ +WGGIA Sbjct: 280 EIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIA 336 Query: 348 SVGLGLPLMFTQ-----GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTAS 402 + + +MF + G SL N + GL QKG IAPG DAD V S Sbjct: 337 GLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGL-QQKGRIAPGKDADFVFIQPNS 395 Query: 403 KHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTLL 456 + ++N + +++K++ Y G T+ + KTILRG V+Y G P GQ +L Sbjct: 396 SYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 449 >gi|3121748|sp|O32137|ALLA_BACSU PUTATIVE ALLANTOINASE >gi|2635738|emb|CAB15231| (Z99120) similar to allantoinase [Bacillus subtilis] Length = 446 Score = 241 bits (609), Expect = 7e-63 Identities = 134/394 (34%), Positives = 210/394 (53%), Gaps = 15/394 (3%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLE 121 + PG++D HVH NEPGR WEGFETG+Q +GG TT DMPLN IP T E+ K E Sbjct: 52 VFPGVIDCHVHFNEPGREDWEGFETGSQMMAAGGCTTYFDMPLNCIPSTVTAEHLLAKAE 111 Query: 122 AAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALK 181 + D WGGLVP ++ D+ P+ +AG GFK FL SG +EF + + + + + Sbjct: 112 LGRQKSAVDFALWGGLVPGHIEDIRPMAEAGAIGFKAFLSKSGTDEFRSVDERTLLKGMA 171 Query: 182 VLAEEDTMMMFHAELPKAHEDQQQ--PEQSHREYSSFLSSRPDSFEIDAINLILECLRAR 239 +A ++ HAE Q + + ++ +SRP+ E++A+ ++ + Sbjct: 172 EIAAAGKILALHAESDAITSYLQMVLANKGKVDADAYAASRPEEAEVEAVYRTIQYAKVT 231 Query: 240 NGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPI 299 PVH VH+++ KA+ LIR+A+ GL V+ ETC HY+ + + + + KC PP+ Sbjct: 232 G---CPVHFVHISTAKAVRLIREAKQEGLDVSVETCPHYVLFSHDDLRQRGSVAKCAPPL 288 Query: 300 RSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIAS-----VGLGLP 354 RS +++ L + L G I V SDHSPC P LK ++ + F SWGGI+ +G+ L Sbjct: 289 RSRQSKETLIETLIAGDIDMVSSDHSPCRPSLK--REDNMFLSWGGISGGQFTLLGM-LE 345 Query: 355 LMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFK 414 L I W + + GL +KG + G DAD V+ + + ++ S++ K Sbjct: 346 LALEHQIPFETIAEWTAAAPAKRFGL-QKKGRLEAGCDADFVLV-SMEPYTVTRESMFAK 403 Query: 415 NKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSK 448 +K + Y G T ++ T +G+ VY + V++ Sbjct: 404 HKKSIYEGHTFPCSISATYSKGRCVYNDGEKVTE 437 >gi|3122243|sp|P81006|HYDA_ARTAU D-HYDANTOINASE (DIHYDROPYRIMIDINASE) (DHPASE) Length = 458 Score = 162 bits (407), Expect = 3e-39 Identities = 122/439 (27%), Positives = 212/439 (47%), Gaps = 14/439 (3%) Query: 25 STESGTILDVL--EGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWE 82 S++ T D+L +G V + + E + ++PG+VD HVH+ + + Sbjct: 13 SSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRY 72 Query: 83 G-FETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHN 141 G FE +++A GG+TT+++MP+ PPTT ++ F K + A ++ D +GG VP N Sbjct: 73 GRFELDSESAAVGGITTIIEMPIT-FPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGN 131 Query: 142 LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHE 201 LP++ + AG GFK + S F + + E + +A ++++ HAE + Sbjct: 132 LPEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQ 191 Query: 202 DQQQPEQSH--REYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPL 259 Q+ ++ ++ +++ +S+P E +AI L L+ G + ++H+++ + L Sbjct: 192 ALQKQIKAAGGKDMAAYEASQPVFQENEAIQRAL-LLQKEAGC--RLIVLHVSNPDGVEL 248 Query: 260 IRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGS 319 I +A++ G V E+ YL I + Y K PP+RS LW+ L G+I + Sbjct: 249 IHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDT 308 Query: 320 VVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG-----CSLVDIVTWCCKNT 374 + SDH E K D + + G + LP+M T G SL +V C+ Sbjct: 309 LGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKP 368 Query: 375 SHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTIL 434 + G+ QKGT+ G DADL++ D K+ S +K + ++GM V G + T++ Sbjct: 369 AKLFGIYPQKGTLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMV 428 Query: 435 RGQVVYTNANGVSKTPLGQ 453 RG VV + + GQ Sbjct: 429 RGTVVAEKGEVLVEQGFGQ 447 >gi|3127836|emb|CAA18902| (AL023496) hypothetical protein [Streptomyces coelicolor] Length = 467 Score = 146 bits (364), Expect = 4e-34 Identities = 125/411 (30%), Positives = 192/411 (46%), Gaps = 27/411 (6%) Query: 50 EIHTLENVSPCT---ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPL 104 E T ENV + ++PG VD H H+ P G + + FETGT+AA GG TT+VD + Sbjct: 42 EAFTAENVIDASGKYVIPGGVDGHTHMEMPFGGTYAADTFETGTRAAAWGGTTTIVDFAI 101 Query: 105 NAIPPTTNVENFRIKLEAAEGQMWCDVGFW---GGLVPHNLPDLIPLVKAGVRGFKGFLL 161 ++ + E AEG D GF + L ++ LV+ GV FK F+ Sbjct: 102 QSVGHSLR-EGLDAWHAKAEGNCAIDYGFHMIVSDVNQETLKEMDLLVEEGVTSFKQFMA 160 Query: 162 DSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSS-- 219 GV + G+ I A++ AE ++M HAE A + + + E Sbjct: 161 YPGVF-YSDDGQ--ILRAMQRAAENGGLIMMHAENGIAIDVLVEQALARGETDPRFHGEV 217 Query: 220 RPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYL 279 R E +A + + + P+ ++VH+++ +A+ + +AR GLPV ETC YL Sbjct: 218 RKALLEAEATHRAIRLAQVAGAPL---YVVHVSATEAVAELTRARDEGLPVFGETCPQYL 274 Query: 280 CIAAEQI--PD--GATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSP-CTPELKNL 334 ++ + + PD GA Y C P+R + ++ LW LR + V +DH P C K L Sbjct: 275 FLSTDNLAEPDFEGAKYV-CSTPLRPKEHQAALWRGLRTNDLQVVSTDHCPFCFSGQKEL 333 Query: 335 QKGDFFDSWGGIASVGLGLPLMFTQGCS-LVDIVTW---CCKNTSHQVGLSHQKGTIAPG 390 +GDF G+ V + L+ + W C + GL +KGTIAPG Sbjct: 334 GRGDFSRIPNGMPGVENRMDLLHQAVVEGHIGRRRWIEIACATPARMFGLYPKKGTIAPG 393 Query: 391 YDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYT 441 DAD+VV+D ++ IS + + +AY G + G V + RG+ V T Sbjct: 394 ADADIVVYDPHAEQVISAETHHMNVDYSAYEGRRITGRVETVLSRGEPVVT 444 >gi|3122649|sp|O27199|PYRC_METTH DIHYDROOROTASE (DHOASE) >gi|2622230 (AE000882) dihydroorotase [Methanobacterium thermoautotrophicum] Length = 454 Score = 127 bits (316), Expect = 2e-28 Identities = 122/433 (28%), Positives = 191/433 (43%), Gaps = 48/433 (11%) Query: 17 NKPATIVYSTESGTILDVLEGSV-VMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNE 75 ++ T+ + G I+ + G + EK ++ Y +LPGL+D+HVH + Sbjct: 35 DRDLTVNIGVDDGKIVQISRGRIDASEKIDLKGY-----------FVLPGLIDAHVHFRD 83 Query: 76 PGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWG 135 PG E F TG+ AA GG +TV+DMP N +PP N F K+ E + D G Sbjct: 84 PGLEYKEDFRTGSMAAAHGGFSTVLDMP-NTVPPADNAAEFERKIRIGERKSVVDFGLHA 142 Query: 136 GLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV-----LAEEDTMM 190 G ++ D+ +++ FK F+ +G+ + +E + + V D +M Sbjct: 143 GF--RSVSDVKGILRFMPASFKVFMDLTGISTVDGLFRELKDLSAPVPVTVHCENRDVVM 200 Query: 191 MFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVH 250 EL +D+ P S++ +RP E + + E L PVHI H Sbjct: 201 KSMKEL----KDRSDP-------SAYALARPPLAEEVS---VAEVLALSIHHEHPVHICH 246 Query: 251 LASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWD 310 L+++KA+ L+ R VT E H+L + + T K PP+R +R Sbjct: 247 LSTVKALQLVEPFREY---VTCEVTPHHLLLDSGAFRRFGTMVKTNPPLRPPESRIYPEF 303 Query: 311 ALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFT----QGCSLVDI 366 R +IG +DH+P E K +KG +D+ GI ++ + L L+ T SL I Sbjct: 304 LDRINIIG---TDHAPHGIEEK--RKG-IWDAPPGIPNLEVVLKLLLTLVSKGRMSLSTI 357 Query: 367 VTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVK 426 + + GL KG IA G DAD V D +I + Y K T + G + Sbjct: 358 RRMLAEEPARIFGL-RSKGRIAEGMDADFTVIDLKETGRIRSDEFYSKAHYTPFEGFSYT 416 Query: 427 GTVLKTILRGQVV 439 G + TI+RG+ V Sbjct: 417 GGPVMTIVRGRAV 429 >gi|3122249|sp|Q45515|HYDA_BACST D-HYDANTOINASE (DIHYDROPYRIMIDINASE) (DHPASE) >gi|628991|pir||JC2310 dihydropyrimidinase (EC 3.5.2.2) - Bacillus stearothermophilus >gi|688288|bbs|156100 (S73773) hydantoinase [Bacillus stearothermophilus, NS1122A, Peptide, 471 aa] [Bacillus stearothermophilus] >gi|1090997|prf||2020276A hydantoinase [Bacillus stearothermophilus] Length = 471 Score = 126 bits (314), Expect = 3e-28 Identities = 128/470 (27%), Positives = 208/470 (44%), Gaps = 49/470 (10%) Query: 11 VIINGANKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSH 70 +I NG AT +Y + L + +G + + + + ++ + C + PG +D H Sbjct: 4 LIKNGTIVTATDIYEAD----LLIQDGKIAVIGRNLDESGAEVID-ATGCYVFPGGIDPH 58 Query: 71 VHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLN--AIPPTTNVENFRIKLEAAEGQ 126 HL+ P G + + FE+GT AA GG TT++D L P +E + K A G+ Sbjct: 59 THLDMPFGGTVTKDDFESGTIAAAFGGTTTIIDFCLTNKGEPLKKAIETWHNK---ATGK 115 Query: 127 MWCDVGFWGGL------VPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 D GF + V LP +I + G+ FK F+ V + G Y L Sbjct: 116 AVIDYGFHLMISEITDDVLEELPKVIE--EEGITSFKVFMAYKDVFQADD-GTLY--RTL 170 Query: 181 KVLAEEDTMMMFHAELPKAHE--DQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRA 238 E ++M HAE + ++ E H + +RP E +A + Sbjct: 171 VAAKELGALVMVHAENGDVIDYLTKKALEDGHTDPIYHALTRPPELEGEATGRACQLTEL 230 Query: 239 RNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP----DGATYFK 294 + ++VH++ +A+ I +AR GL V ETC YL + + +GA Y Sbjct: 231 AGSQL---YVVHVSCAQAVEKIAEARNKGLNVWGETCPQYLVLDQSYLEKPNFEGAKYV- 286 Query: 295 CCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKN---LQKGDFFDSWGGIASVGL 351 PP+R + +++ LW+AL+ G + ++ SD C+ + K L +GDF G + Sbjct: 287 WSPPLREKWHQEVLWNALKNGQLQTLGSDQ--CSFDFKGQKELGRGDFTKIPNGGPIIED 344 Query: 352 GLPLMFTQGCS--------LVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASK 403 + ++F++G VDIV+ + GL +KGTIA G DADLV+FD + Sbjct: 345 RVSILFSEGVKKGRITLNQFVDIVS---TRIAKLFGLFPKKGTIAVGADADLVIFDPTVE 401 Query: 404 HKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 IS + + + GM V G + + RG+ V + V K GQ Sbjct: 402 RVISAETHHMAVDYNPFEGMKVTGEPVSVLCRGEFVVRDKQFVGKPGYGQ 451 >gi|1172784|sp|P46538|PYRC_BACCL DIHYDROOROTASE (DHOASE) >gi|2118165|pir||I40167 dihydroorotase (EC 3.5.2.3) - Bacillus caldolyticus >gi|312441|emb|CAA51737| (X73308) dihydroorotase [Bacillus caldolyticus] Length = 427 Score = 124 bits (308), Expect = 1e-27 Identities = 111/391 (28%), Positives = 172/391 (43%), Gaps = 32/391 (8%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENF----- 116 I+PGL+D HVHL EPG + E ETGT AA GG TTV MP N P E Sbjct: 52 IVPGLIDLHVHLREPGGEAKETIETGTLAAAKGGFTTVAAMP-NTNPAPDRKEQMEWLQA 110 Query: 117 RIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYI 176 RI+ E A + G L D L +AG F D GV G + Sbjct: 111 RIR-ETARVNVLPYAAITIGQKGEELTDFAALKEAGAFAFT----DDGVG-VQSAGMMF- 163 Query: 177 EEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECL 236 EA+K A D ++ H E + E++ R +A+++ + L Sbjct: 164 -EAMKQAAALDMAIVAHCEDDTLTNGGAVHDG---EFARRYGLRGIPSVCEAVHIARDVL 219 Query: 237 RARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCC 296 A H+ H+++ +++ ++R A+ +G+ VT E H+L + E IP +K Sbjct: 220 LAEAAGCH-YHVCHISTKESVRVVRDAKRAGIRVTAEVTPHHLLLCDEDIPGLDANYKMN 278 Query: 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCT--PELKNLQKGDFFDSWGGIASVGLGLP 354 PP+RS +R L + L +G I + +DH+P T + K ++ F GI + P Sbjct: 279 PPLRSREDRDALIEGLLDGTIDFIATDHAPHTAAEKAKGIEAAPF-----GIVGLETAFP 333 Query: 355 LMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNS 409 L++T +L +V W + GL + G +A G AD+ V D ++ I Sbjct: 334 LLYTHFVKTGVFTLKQLVDWLTIKPAQCFGL--KAGRLAVGAPADIAVIDLETEEAIDPE 391 Query: 410 SVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 + K K T + G +G + T + G +V+ Sbjct: 392 TFASKGKNTPFAGWVCQGWPVMTFVGGTLVW 422 >gi|3123145|sp|Q46806|YGEZ_ECOLI HYPOTHETICAL 51.5 KD PROTEIN IN PBL-LYSS INTERGENIC REGION >gi|887823 (U28375) UUG start [Escherichia coli] >gi|1789237 (AE000370) orf, hypothetical protein [Escherichia coli] Length = 465 Score = 123 bits (307), Expect = 2e-27 Identities = 115/418 (27%), Positives = 185/418 (43%), Gaps = 37/418 (8%) Query: 60 CTILPGLVDSHVHLN-EPG-RTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFR 117 C + PG VD H H N + G S + F TGT+AA GG TT++D P N R Sbjct: 53 CYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHM--GFGP--NGCRLR 108 Query: 118 IKLEAAEG----QMWCDVGFWGGL--VPHNLPDLIPL-VKAGVRGFKGFLLDSGVEEFPP 170 +LE G + D F G + + H + D IP+ V+ G+ FK +L Sbjct: 109 HQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQY-----K 163 Query: 171 IGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP----EQSHREYSSFLSSRPDSFEI 226 + + + +AL+ L E + H E A ++ + Y + SRP E Sbjct: 164 LNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHAL--SRPLECEA 221 Query: 227 DAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQI 286 +AI ++ + P++IVHL++ + +R ARA+ PV ETC YL + Sbjct: 222 EAIARMINLAQIAGNA--PLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSY 279 Query: 287 P-DGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKN---LQKGDFFDS 342 + F PP+R+ + LW + +G I V +DH CT + + KGDF Sbjct: 280 DTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDH--CTFSMAQRLQISKGDFSRC 337 Query: 343 WGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLVV 397 G+ V + L+F+ G I V + GL QKG +APG D D+V+ Sbjct: 338 PNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVI 397 Query: 398 FDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTL 455 D +I + ++ + + G T +G +++T+ RG+ ++ + K G+ L Sbjct: 398 IDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFL 455 >gi|3914511|sp|O57740|PYRC_PYRHO DIHYDROOROTASE (DHOASE) >gi|3258407|gnl|PID|d1032033 (AP000007) 417aa long hypothetical dihydroorotase [Pyrococcus horikoshii] Length = 417 Score = 119 bits (296), Expect = 3e-26 Identities = 121/438 (27%), Positives = 189/438 (42%), Gaps = 68/438 (15%) Query: 34 VLEGSVVMEKTEITKYEIHTLENVSPCT------ILPGLVDSHVHLNEPGRTSWEGFETG 87 +++GS+ +E +I K+ + L+ ILPGL+D HVHL + + E +G Sbjct: 18 IIDGSIGIEDDKIAKFSLRELKGDKKIKVEKGKIILPGLIDVHVHLRDFNESYKETIASG 77 Query: 88 TQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIP 147 T+AAI GG+TTV DMP N PP + + +++ + + + D G L+ N P Sbjct: 78 TKAAIHGGITTVFDMP-NTKPPIMDEKTLKLRELIFKKKSYSDYAL-GFLIAGNEPAKAD 135 Query: 148 LVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPE 207 K + G + EE + + + V AEE ++ + E Sbjct: 136 FYKIFMGASTGGIYSKNFEE----DYKKAPDIVSVHAEEYELINRYPE------------ 179 Query: 208 QSHREYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASG 267 RP E+ AI + L+A P+HI H+++ + I KA Sbjct: 180 ------------RPPIVEVVAIK---KALQASKKMKKPLHICHVSTKDGLKEILKANIPW 224 Query: 268 LPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPC 327 V+ E H+L + + + K PP+R E +R+ LW+ L+ I + SDH+P Sbjct: 225 --VSFEVTPHHLFLTRRDY-ERSKLLKVYPPLRDEEDRRYLWENLKS--IPIIASDHAPH 279 Query: 328 TPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGCSLVD------IVTW--CCKNTSHQVG 379 T E D G A GLP + T+ L+D I W K + + Sbjct: 280 TLE----------DKEAGAA----GLPGLETEVALLLDAVNKGMITIWDIVAKMSINPAR 325 Query: 380 LSHQKGT-IAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQV 438 + K G DADL+V D + I + Y K T Y G VKG V+ TILRG+V Sbjct: 326 IFKIKNKGWEEGKDADLIVVDMKKEWTIKAENFYTKANWTPYEGWKVKGKVIMTILRGEV 385 Query: 439 VYTNANGVSKTPLGQTLL 456 V + + K P G+ ++ Sbjct: 386 VMEDDEIIGK-PRGERIV 402 >gi|191364 (M28866) S-dihydroorotate amidohydrolase (DHOase) (EC 3.5.2.3) [Mesocricetus auratus] Length = 480 Score = 117 bits (290), Expect = 2e-25 Identities = 116/396 (29%), Positives = 167/396 (41%), Gaps = 57/396 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGL+D HVHL EPG T E F +GT AA++GGVT V MP N PP + + + Sbjct: 74 LPGLIDVHVHLREPGGTHKEDFASGTAAALAGGVTMVCAMP-NTRPPIIDAPALALAQKL 132 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 AE CD + G N L V G K +L + + E L Sbjct: 133 AEAGARCDFALFLGASSENAGTL-GAVAGSAAGLKLYL-----------NETFSELRLDS 180 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 +A+ M H E +H P +H E S + A+ ++ + + Sbjct: 181 VAQ----WMEHFETWPSH----LPIVAHAERQS----------VAAVLMVAQLTQR---- 218 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 PVHI H+A + I LI+ A+A GLPVT E H+L + E + G + P + S Sbjct: 219 --PVHICHVARKEEILLIKTAKAQGLPVTCEVAPHHLFLNREDLERLGPGRGEVRPELGS 276 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 + + LW+ + VI SDH+P T E K K G + LPL+ T Sbjct: 277 REDMEALWENM--AVIDCFASDHAPHTLEEKCGPKPP-----PGFPGLETMLPLLLTAVS 329 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 SL D++ N L Q+ T V D + I + + K + Sbjct: 330 EGRLSLDDLLQRLHHNPRRIFHLPLQEDT--------YVEVDLEHEWTIPSHMPFSKARW 381 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 T + G VKGT+ + +LRG+V Y + + GQ Sbjct: 382 TPFEGQKVKGTIRRVVLRGEVAYIDGQVLVPPGYGQ 417 >gi|3024509|sp|Q91437|PYR1_SQUAC CAD PROTEIN (CONTAINS: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE , ASPARTATE CARBAMOYLTRANSFERASE , DIHYDROOROTASE >gi|2118285|pir||A57541 pyrimidine synthesis multifunctional protein CAD - spiny dogfish >gi|951096 (U18868) multifunctional protein CAD [Squalus acanthias] Length = 2242 Score = 117 bits (290), Expect = 2e-25 Identities = 119/424 (28%), Positives = 177/424 (41%), Gaps = 63/424 (14%) Query: 35 LEGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISG 94 L G KT I H L LPGL+D HVHL EPG T E F +GT AA++G Sbjct: 1449 LVGDTPPVKTHIDSMSSHKLIR------LPGLIDVHVHLREPGGTHKEDFASGTAAALAG 1502 Query: 95 GVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVR 154 GVT V MP N P T+ +F + + A CD + G N D++PL+ Sbjct: 1503 GVTMVCAMP-NTNPAITDQTSFALVQKLATAGARCDFALFLGASSDN-ADVLPLISNSAA 1560 Query: 155 GFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYS 214 G K +L D+ LK+ + ++ M H E H P H E Sbjct: 1561 GLKMYLNDT-------------FSTLKM--DNVSLWMEHFEKWPKH----LPIVVHAERQ 1601 Query: 215 SFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTET 274 + + AI ++ + + PVHI H+A + I +IR A+ G+ VT E Sbjct: 1602 T----------VAAILMVAQLYQR------PVHICHVARKEEIQIIRAAKQKGVQVTCEV 1645 Query: 275 CFHYLCIAAEQIPD-GATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKN 333 H+L + E + G + P + ++ + LW+ L VI +DH+P + E KN Sbjct: 1646 APHHLFLNEEDLESIGHGKGQVRPMLSTKEDVNALWENL--DVIDCFATDHAPHSVEEKN 1703 Query: 334 LQKGDFFDSWGGIASVGLGLPLMFTQ----GCSLVDIVTWCCKNTSHQVGLSHQKGTIAP 389 G + LPL+ T ++ D+V +N L Q+ T Sbjct: 1704 SDSPP-----PGYPGLETMLPLLLTAVSEGRLTIDDLVKRLYENPRKIFSLPVQENT--- 1755 Query: 390 GYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKT 449 V D + I + + K+K T + G VKG V + +LRG+V Y + + Sbjct: 1756 -----YVEVDLEQEWIIPSYMQFTKSKWTPFEGKKVKGRVRRVVLRGEVAYIDGQVLVPP 1810 Query: 450 PLGQ 453 GQ Sbjct: 1811 GYGQ 1814 >gi|191173 (M33702) dihydroorotase synthetase complex (EC 3.5.2.3) [Cricetulus sp.] Length = 708 Score = 117 bits (290), Expect = 2e-25 Identities = 116/396 (29%), Positives = 167/396 (41%), Gaps = 57/396 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGL+D HVHL EPG T E F +GT AA++GGVT V MP N PP + + + Sbjct: 62 LPGLIDVHVHLREPGGTHKEDFASGTAAALAGGVTMVCAMP-NTRPPIIDAPALALAQKL 120 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 AE CD + G N L V G K +L + + E L Sbjct: 121 AEAGARCDFALFLGASSENAGTL-GAVAGSAAGLKLYL-----------NETFSELRLDS 168 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 +A+ M H E +H P +H E S + A+ ++ + + Sbjct: 169 VAQ----WMEHFETWPSH----LPIVAHAERQS----------VAAVLMVAQLTQR---- 206 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 PVHI H+A + I LI+ A+A GLPVT E H+L + E + G + P + S Sbjct: 207 --PVHICHVARKEEILLIKTAKAQGLPVTCEVAPHHLFLNREDLERLGPGRGEVRPELGS 264 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 + + LW+ + VI SDH+P T E K K G + LPL+ T Sbjct: 265 REDMEALWENM--AVIDCFASDHAPHTLEEKCGPKPP-----PGFPGLETMLPLLLTAVS 317 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 SL D++ N L Q+ T V D + I + + K + Sbjct: 318 EGRLSLDDLLQRLHHNPRRIFHLPLQEDT--------YVEVDLEHEWTIPSHMPFSKARW 369 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 T + G VKGT+ + +LRG+V Y + + GQ Sbjct: 370 TPFEGQKVKGTIRRVVLRGEVAYIDGQVLVPPGYGQ 405 >gi|1346930|sp|P48795|PYRC_LACLE DIHYDROOROTASE (DHOASE) >gi|1085058|emb|CAA55633| (X78999) dihydroorotase [Lactobacillus leichmannii] Length = 427 Score = 117 bits (290), Expect = 2e-25 Identities = 104/396 (26%), Positives = 173/396 (43%), Gaps = 42/396 (10%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLE 121 + PGLVD H H EPG T E +TG++AA GG TTV MP N P ++E F ++ Sbjct: 50 LAPGLVDIHEHYREPGFTYKETIKTGSEAASRGGFTTVCTMP-NVDPIPDDLETFEKQVA 108 Query: 122 AAEGQMWCDVGFWGG----LVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIE 177 E + +G L + D+ L +AG F G+++ + E ++ Sbjct: 109 LNEANSCVHLKQYGAITEDLTSDKVVDMAALKEAGAFAFSND--GHGIQQAGTM-YEAMQ 165 Query: 178 EALKV---LAE--EDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 EA KV + E +D + H + + ++ P + + Sbjct: 166 EAAKVGLAICEHIQDDSLYHHGVMNAGKKAEEL-------------GLPGILGVSESAQL 212 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 L H H+++ +++ LIR A+ G+ VT E H+L ++ E+I Y Sbjct: 213 ARDLVLAQATGVHYHACHVSTKESVELIRIAKEYGINVTAEATPHHLLLSEEEIDGNNGY 272 Query: 293 FKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLG 352 +K PP+RS+ ++ L + + +G I + +DH+P + E K GD + GI Sbjct: 273 YKMNPPLRSKEDQFALIEGMLDGTIDLIATDHAPHSREEK---AGDMRKAAFGIIGNETA 329 Query: 353 LPLMFTQGCS--------LVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKH 404 ++T+ L+D++++ + GL G +APG +ADL VFD Sbjct: 330 FACLYTKFVKSGQMDLSLLLDLMSY---QPAKLFGL--DAGVLAPGKEADLAVFDLDHAE 384 Query: 405 KISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 K+S K T + G V G T + G++VY Sbjct: 385 KLSEEDYLSKGVNTPFTGQEVYGMTALTFVSGKLVY 420 >gi|131696|sp|P08955|PYR1_MESAU CAD PROTEIN (CONTAINS: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE , ASPARTATE CARBAMOYLTRANSFERASE , DIHYDROOROTASE >gi|538556|pir||A23443 pyrimidine synthesis multifunctional protein CAD - golden hamster Length = 2225 Score = 117 bits (290), Expect = 2e-25 Identities = 116/396 (29%), Positives = 167/396 (41%), Gaps = 57/396 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGL+D HVHL EPG T E F +GT AA++GGVT V MP N PP + + + Sbjct: 1464 LPGLIDVHVHLREPGGTHKEDFASGTAAALAGGVTMVCAMP-NTRPPIIDAPALALAQKL 1522 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 AE CD + G N L V G K +L + + E L Sbjct: 1523 AEAGARCDFALFLGASSENAGTL-GAVAGSAAGLKLYL-----------NETFSELRLDS 1570 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 +A+ M H E +H P +H E S + A+ ++ + + Sbjct: 1571 VAQ----WMEHFETWPSH----LPIVAHAERQS----------VAAVLMVAQLTQR---- 1608 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 PVHI H+A + I LI+ A+A GLPVT E H+L + E + G + P + S Sbjct: 1609 --PVHICHVARKEEILLIKTAKAQGLPVTCEVAPHHLFLNREDLERLGPGRGEVRPELGS 1666 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 + + LW+ + VI SDH+P T E K K G + LPL+ T Sbjct: 1667 REDMEALWENM--AVIDCFASDHAPHTLEEKCGPKPP-----PGFPGLETMLPLLLTAVS 1719 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 SL D++ N L Q+ T V D + I + + K + Sbjct: 1720 EGRLSLDDLLQRLHHNPRRIFHLPLQEDT--------YVEVDLEHEWTIPSHMPFSKARW 1771 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 T + G VKGT+ + +LRG+V Y + + GQ Sbjct: 1772 TPFEGQKVKGTIRRVVLRGEVAYIDGQVLVPPGYGQ 1807 >gi|3122654|sp|P96081|PYRC_THEAQ DIHYDROOROTASE (DHOASE) >gi|1684761|emb|CAA70731| (Y09536) dihydroorotase (DHOase) [Thermus aquaticus] Length = 426 Score = 115 bits (284), Expect = 9e-25 Identities = 103/395 (26%), Positives = 167/395 (42%), Gaps = 31/395 (7%) Query: 60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIK 119 C + PG +D H HL EPG E +G AA+ GG T +V MP N PP E R Sbjct: 45 CFLAPGFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMP-NTNPPVDTPEAVRAL 103 Query: 120 LEAAEGQMWCDVGFWGGLVP-HNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE---- 174 E A+ GL H L + G L ++G G+ Sbjct: 104 KEKAKAL---------GLARLHPAAALTEKQEGKTLTPAGLLQEAGAVLLTDDGRTNEDA 154 Query: 175 -YIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLIL 233 + L + A + HAE + + + L P E I L Sbjct: 155 GVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLG-LPGNPPEAEAARIARDL 213 Query: 234 ECLR---ARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 E LR R+ P +H+ HL++ + + L+R+A+ +GLPVT E H+L + E + Sbjct: 214 EVLRYALRRSPATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFD 273 Query: 291 TYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVG 350 FK PP+R E +R+ L + L +G + ++ +DH+P T K + D + GI S+ Sbjct: 274 PLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTQAEKEM---DLLRAPFGIPSLE 330 Query: 351 LGLPLMFTQ-----GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHK 405 + PL++T+ G L +V +GL + G +A LV+ D + Sbjct: 331 VAFPLLYTELHLKRGFPLRRLVELFTDGPRRVLGLPPLH--LEEGTEASLVLLD-PKERP 387 Query: 406 ISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 + K + + + G + G + T++ G++V+ Sbjct: 388 VDPQGFASKARFSPWTGWRLGGWPVLTLVEGRIVH 422 >gi|517425 (U09990) dihydro-orotase [Methanobacterium thermoautotrophicum] Length = 430 Score = 114 bits (282), Expect = 1e-24 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 48/421 (11%) Query: 17 NKPATIVYSTESGTILDVLEGSV-VMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNE 75 ++ T+ + G I+ + G + EK ++ Y +LPGL+D+HVH + Sbjct: 12 DRDLTVNIGVDDGKIVQISRGRIDASEKIDLKAY-----------FVLPGLIDAHVHFRD 60 Query: 76 PGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWG 135 PG E F TG+ AA GG +TV+DMP N +PP N F K+ E + D G Sbjct: 61 PGLEYKEDFRTGSMAAAHGGFSTVLDMP-NTVPPADNAAEFERKIRIGERKSVVDFGLHA 119 Query: 136 GLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV-----LAEEDTMM 190 G ++ D+ +++ FK F+ +G+ + +E + + V D +M Sbjct: 120 GF--RSVSDVKGILRNMPASFKVFMDLTGISTVDGLFRELKDLSAPVPVTVHCENRDVVM 177 Query: 191 MFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVH 250 EL +D+ P + L E+ ++ + + PVHI H Sbjct: 178 KSMKEL----KDRSDPS------AYALCKTSPRREVSVAEVLALSIHHEH----PVHICH 223 Query: 251 LASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWD 310 L+++KA+ L+ R VT++ H+L + + T K PP+R +R Sbjct: 224 LSTVKALQLVEPFREY---VTSQVTPHHLLLDSGAFRRFGTMVKTNPPLRPPESRIYPEF 280 Query: 311 ALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFT----QGCSLVDI 366 R +IG +DH+P E K +KG +D+ GI ++ + L L+ T SL I Sbjct: 281 LDRINIIG---TDHAPHGIEEK--RKG-IWDAPPGIPNLEVVLKLLLTLVSKGRMSLSTI 334 Query: 367 VTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVK 426 + GL KG IA G DAD V D +I + Y K T + G + Sbjct: 335 RRMLAEEPPRIFGL-RSKGRIAEGMDADFTVIDLKETGRIRSDEFYSKAHYTPFEGFSYT 393 Query: 427 G 427 G Sbjct: 394 G 394 >gi|2506025|dbj||AB007768_1 (AB007768) dihydroorotase [Rattus rattus] Length = 474 Score = 113 bits (281), Expect = 2e-24 Identities = 116/396 (29%), Positives = 165/396 (41%), Gaps = 57/396 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGL+D HVHL EPG T E F +GT AA++GGVT V MP N PP + + + Sbjct: 68 LPGLIDVHVHLREPGGTHKEDFASGTAAALAGGVTMVCAMP-NTRPPIIDAPALALAQKL 126 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 AE CD + G N L V G K +L + + E L Sbjct: 127 AEAGARCDFTLFLGASSENAGTL-GAVAGSAAGLKLYL-----------NETFSELRLDS 174 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 +A+ M H E +H P +H E S + A+ ++ + R Sbjct: 175 VAQ----WMEHFETWPSH----LPIVAHAERQS----------VAAVLMVAQLTRR---- 212 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 VHI H+A + I LI+ A+A GLPVT E H+L + E + G + P + S Sbjct: 213 --SVHICHVARKEEILLIKTAKAQGLPVTCEVAPHHLFLNREDLERLGPGKGEVRPELGS 270 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 + + LW+ + VI SDH+P T E K K G + LPL+ T Sbjct: 271 REDMEALWENM--AVIDCFASDHAPHTLEEKCGPKPP-----PGFPGLETMLPLLLTAVS 323 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 SL D++ N L Q+ T V D + + + + K Sbjct: 324 EGRLSLDDLLQRLHHNPRRIFHLPLQEDT--------YVEVDLEHEWTVPSHMPFSKAHW 375 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 T + G VKGTV + +LRG+V Y + + GQ Sbjct: 376 TPFEGQKVKGTVRRVVLRGEVAYIDGQVLVPPGYGQ 411 >gi|3334230|sp|Q59699|HYDA_PSEPU D-HYDANTOINASE (DIHYDROPYRIMIDINASE) (DHPASE) >gi|2828803 (U84197) D-hydantoinase [Pseudomonas putida] Length = 495 Score = 112 bits (278), Expect = 4e-24 Identities = 101/411 (24%), Positives = 182/411 (43%), Gaps = 47/411 (11%) Query: 62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI- 118 ++PG +D H H+ P G + E F +GT A ++GG T+++D + P + +E F Sbjct: 51 LMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPN-PQQSLLEAFHTW 109 Query: 119 ----KLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFL------------LD 162 + A++ + +W V + +L+ K GV FK F+ L Sbjct: 110 RGWAQKSASDYGFHVAITWWSEQVAEEMGELV--AKHGVNSFKHFMAYKNAIMAADDTLV 167 Query: 163 SGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPD 222 + E +G A+ + E+ +++H + + PE + SRP Sbjct: 168 ASFERCLQLG------AVPTVHAENGELVYHLQKKLLAQGMTGPE-------AHPLSRPS 214 Query: 223 SFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCI- 281 E +A + +R P+++VH++S +A+ I ARA G PV E +L + Sbjct: 215 QVEGEAAS---RAIRIAETIGTPLYVVHISSREALDEITYARAKGQPVYGEVLPGHLLLD 271 Query: 282 -AAEQIPDGATY--FKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGD 338 + + PD AT + PP R +++ LW L+ G + + +DH E K + + D Sbjct: 272 DSVYRDPDWATAAGYVMSPPFRPREHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDD 331 Query: 339 FFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDA 393 F G A + + +++ G S+ + V NT+ L +KG I G DA Sbjct: 332 FSRIPNGTAGIEDRMAVLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADA 391 Query: 394 DLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 DLV++D +S + + + + G TV+G TI +G+V++ + + Sbjct: 392 DLVLWDPQGTRTLSAQTHHQRVDFNIFEGRTVRGVPSHTISQGKVLWADGD 442 >gi|3914514|sp|O66990|PYRC_AQUAE DIHYDROOROTASE (DHOASE) >gi|2983361 (AE000708) dihydroorotase [Aquifex aeolicus] Length = 422 Score = 111 bits (274), Expect = 1e-23 Identities = 100/388 (25%), Positives = 177/388 (44%), Gaps = 29/388 (7%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLE 121 + PG +D HVHL +PG+T E E+G++ A++GG TT+V MP N PP N L+ Sbjct: 53 VCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQ 111 Query: 122 AAEGQMWCDVGFWG----GLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIE 177 ++ C V G G + D L +AG F D G P + + Sbjct: 112 KSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAF----TDDG---SPVMDSSVMR 164 Query: 178 EALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILE-CL 236 +AL++ ++ +M H E K + E S+ L + E + I + + L Sbjct: 165 KALELASQLGVPIMDHCEDDKL----AYGVINEGEVSALLGLSSRAPEAEEIQIARDGIL 220 Query: 237 RARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCC 296 R G VHI H+++ ++ +I + G+ +T E ++L ++ + + Sbjct: 221 AQRTG--GHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVN 278 Query: 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPL- 355 PP+R + +R L + ++ G+I +DH+P K L + + GI + LP Sbjct: 279 PPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKELVE----FAMPGIIGLQTALPSA 334 Query: 356 --MFTQG-CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVY 412 ++ +G SL ++ N + +G+ GT+ G AD+ +FD + ++ + Sbjct: 335 LELYRKGIISLKKLIEMFTINPARIIGV--DLGTLKLGSPADITIFDPNKEWILNEETNL 392 Query: 413 FKNKLTAYNGMTVKGTVLKTILRGQVVY 440 K++ T G +KG V+ TI G++VY Sbjct: 393 SKSRNTPLWGKVLKGKVIYTIKDGKMVY 420 >gi|3122248|sp|Q44184|HYDA_AGRRD D-HYDANTOINASE (DIHYDROPYRIMIDINASE) (DHPASE) >gi|1296441|emb|CAA62549| (X91070) D-hydantoinase [Agrobacterium radiobacter] Length = 457 Score = 110 bits (273), Expect = 2e-23 Identities = 111/410 (27%), Positives = 182/410 (44%), Gaps = 28/410 (6%) Query: 62 ILPGLVDSHVHLNEPG--RTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIK 119 + PG +D H H+ S + F T T AA GG TT+VD ++ K Sbjct: 49 VFPGGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQ--DRGHSLREAVAK 106 Query: 120 LEA-AEGQMWCDVGFWGGLVPHN---LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEY 175 + A G+ D G+ ++ + +L L G+ FK F+ G+ + Sbjct: 107 WDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFMAYRGMNMIDDVT--- 163 Query: 176 IEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLS--SRPDSFEIDAINLIL 233 + L A+ +++M HAE A + + + + + SRP E +A L Sbjct: 164 LLRTLDKAAKTGSLVMVHAENGDAADYLRDKFVADGKTAPIYHALSRPPRVEAEATARAL 223 Query: 234 ECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQI--PD--G 289 N P+ +IVHL ++ + +A+A G+ ETC YL + + + PD G Sbjct: 224 ALAEIVNAPI---YIVHLTCEESFDELMRAKARGVHALAETCTQYLYLTKDDLERPDFEG 280 Query: 290 ATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPE-LKNLQKGDFFDSWGGIAS 348 A Y PP R++ +++ LW+ALR GV+ +V SDH E K+ + DF G Sbjct: 281 AKYV-FTPPPRTKKDQEILWNALRNGVLETVSSDHCSWLFEGHKDRGRNDFRAIPNGAPG 339 Query: 349 VGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASK 403 V L +++ QG SL V + G+ +KGT+A G DAD+V++D ++ Sbjct: 340 VEERLMMVY-QGVNEGRISLTQFVELVATRPAKVFGMFPEKGTVAVGSDADIVLWDPEAE 398 Query: 404 HKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 I S+++ ++Y G +KG +LRG+V+ V GQ Sbjct: 399 MVIEQSAMHNAMDYSSYEGHKIKGVPKTVLLRGKVIVDEGTYVGAPTDGQ 448 >gi|131715|sp|P25995|PYRC_BACSU DIHYDROOROTASE (DHOASE) >gi|279573|pir||DEBSO dihydroorotase (EC 3.5.2.3) - Bacillus subtilis >gi|143388 (M59757) dihydroorotase [Bacillus subtilis] >gi|2633923|emb|CAB13424| (Z99112) dihydroorotase [Bacillus subtilis] Length = 428 Score = 109 bits (269), Expect = 5e-23 Identities = 110/394 (27%), Positives = 170/394 (42%), Gaps = 38/394 (9%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTN-----VENF 116 + PG VD HVH EPG E ETG +AA GG TTV MP P T V+N Sbjct: 51 VSPGFVDLHVHFREPGGEKKETIETGAKAAGRGGYTTVAAMPNTRPVPDTKEQMEWVQN- 109 Query: 117 RIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYI 176 RIK E + ++ + + + L +AG F D GV G Y Sbjct: 110 RIK-ETSCVRVLPYASITIRQIGDEMTNFEALKEAGAFAFT----DDGVG-IQTAGMMY- 162 Query: 177 EEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSF--LSSRPDSFEIDAINLILE 234 EA+K A D ++ H E E + + + + S +S I L+L Sbjct: 163 -EAMKRAAAIDKAIVAHCEDNSLIYGGSVHEGTFSKANGLNGIPSVCESVHIARDVLLL- 220 Query: 235 CLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK 294 G H+ H+++ +++ ++R A+ +G+ VT E H+L + E IP T +K Sbjct: 221 ------GANCHYHVCHISTKESVRVVRDAKKAGIRVTAEVSPHHLLLCDEDIPGLDTNYK 274 Query: 295 CCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKN--LQKGDFFDSWGGIASVGLG 352 PP+RS +R L + L +G I + +DH+P T E KN ++ F + + Sbjct: 275 MNPPLRSPEDRAALIEGLLDGTIDFIATDHAPHTEEEKNTEMKLAPFRN-----CRLRNS 329 Query: 353 LPLMFTQGCSLVDIVTWCCKNTSHQV------GLSHQKGTIAPGYDADLVVFDTASKHKI 406 +P C +VT T + GL + GT+ G AD+ + D + I Sbjct: 330 IPASLHTLCQKWQLVTEAADLTYMTIKPCEAFGLPY--GTLQTGQAADITLIDLEKEAVI 387 Query: 407 SNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 + K K T +NG++ G + TI G++ Y Sbjct: 388 DKETFLSKGKNTPFNGISCTGWPVATIAAGKLAY 421 >gi|1709955|sp|P27708|PYR1_HUMAN CAD PROTEIN (CONTAINS: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE , ASPARTATE CARBAMOYLTRANSFERASE , DIHYDROOROTASE >gi|1228049|gnl|PID|d1012088 (D78586) multifunctional protein CAD [Homo sapiens] Length = 2225 Score = 108 bits (268), Expect = 7e-23 Identities = 115/397 (28%), Positives = 164/397 (40%), Gaps = 59/397 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGL+D HVHL EPG T E F +GT AA++GG+T V MP N PP + + + Sbjct: 1464 LPGLIDVHVHLREPGGTHKEDFASGTAAALAGGITMVCAMP-NTRPPIIDGPALALAQKL 1522 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 AE CD + G N L V G L K Y+ E Sbjct: 1523 AEAGARCDFALFLGASSENAGTL-----GTVAGSAAGL------------KLYLNETFSE 1565 Query: 183 LAEEDTMM-MFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNG 241 L + + M H E +H P +H E + A L++ L R+ Sbjct: 1566 LRLDSVVQWMEHFETWPSH----LPIVAHAEQQTV-----------AAVLMVAQLTQRS- 1609 Query: 242 PVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIR 300 VHI H+A + I LI+ A+A GLPVT E H+L ++ + + G + P + Sbjct: 1610 ----VHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGKGEVRPELG 1665 Query: 301 SESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ- 359 S + + LW+ + VI SDH+P T E K + G + LPL+ T Sbjct: 1666 SRQDVEALWEDM--AVIDCFASDHAPHTLEEKCGSRPP-----PGFPGLETMLPLLLTAV 1718 Query: 360 ---GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNK 416 SL D++ N L Q+ T V D + I + + K Sbjct: 1719 SEGRLSLDDLLQRLHHNPRRIFHLPPQEDT--------YVEVDLEHEWTIPSHMPFSKAH 1770 Query: 417 LTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQ 453 T + G VKGTV + +LRG+V Y + + GQ Sbjct: 1771 WTPFEGQKVKGTVRRVVLRGEVAYIDGQVLVPPGYGQ 1807 >gi|3122658|sp|Q58885|PYRC_METJA DIHYDROOROTASE (DHOASE) >gi|2127849|pir||A64486 dihydroorotase (EC 3.5.2.3) - Methanococcus jannaschii >gi|1500377 (U67590) dihydroorotase (pyrC) [Methanococcus jannaschii] Length = 423 Score = 108 bits (266), Expect = 1e-22 Identities = 102/425 (24%), Positives = 197/425 (46%), Gaps = 47/425 (11%) Query: 34 VLEGSVVMEKTEITKYEIHTLE------NVSPCTILPGLVDSHVHLNEPGRTSWEGFETG 87 ++EG +++++ K ++ ++ ++PG++D+HVH G E F +G Sbjct: 14 IIEGDILIDENGRIKKIAKDIKVDDEIIDIKNSLVIPGVIDAHVHFRW-GEEKKEDFLSG 72 Query: 88 TQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIP 147 + A I+GGV +DMP N PP T E F KLE + +V G+ +N + Sbjct: 73 SLAGINGGVCFAIDMPNNK-PPITTKELFYKKLEDCKKDSKINVFLNFGVTENNYLGTVE 131 Query: 148 LVKAGVRGFKGFLLDSGVEEFPPIGKEYIEE--ALKVLAEEDTMMMFHAELPKAHEDQQQ 205 KA +K F++ S +G +IE+ LK + ++ + HAE H+D Sbjct: 132 DAKA----YKIFMVKS-------VGDLFIEDYSKLKDILNQNKLFCIHAE----HKDVIN 176 Query: 206 PEQSHREYSSFLSS---RPDSFEIDAINLILECLR---ARNGPVPPVHIVHLASMKAIPL 259 + +S++ R + E++A+ +++ L+ ++ P VH H+++ +A+ L Sbjct: 177 ENLKKYQLNSWIDHCKIRDEKSEVEAVKEVIKNLKIIDRQSNKKPHVHFCHISTKEALYL 236 Query: 260 IRKAR--ASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVI 317 I+K R + +T E H++ + + + + K PP+R + + L + + Sbjct: 237 IKKVRQELKNIKITVEVTPHHIYLNKDMAEELKGFGKFNPPLREKDDNIALIKGIVNKDV 296 Query: 318 GSVVSDHSP--CTPELKNLQKGDFFDSWGGIASVGLGLPL---MFTQG-CSLVDIVTWCC 371 + SDH+P +LKN++ + GI + +PL + +G SL D + Sbjct: 297 DIIASDHAPHLLEDKLKNVK-----NCPSGIPGIETIVPLTLNLVNKGLISLFDAIRVLS 351 Query: 372 KNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLK 431 KN + ++++ I G A+L + D + KI+ K K + ++G VKG + Sbjct: 352 KNPAKIFNINNK---IEEGNLANLTIIDLKKEGKINAELFKSKAKFSPFDGWEVKGFPIY 408 Query: 432 TILRG 436 T++ G Sbjct: 409 TVING 413 >gi|2500033|sp|P77884|PYRC_LACPL DIHYDROOROTASE (DHOASE) >gi|1514601|emb|CAA91003| (Z54240) dihydroorotase, carbamoylaspartic dehydrase [Lactobacillus plantarum] Length = 430 Score = 104 bits (257), Expect = 1e-21 Identities = 101/396 (25%), Positives = 172/396 (42%), Gaps = 41/396 (10%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMP-LNAIPPTTNVENFRIKL 120 + PG VD HVHL +PG+T+ E TGT AA GG TTV MP ++ +P T R+ Sbjct: 53 VSPGFVDVHVHLRDPGQTAKETIATGTLAAAHGGFTTVGAMPNVDPVPDTPE----RVAT 108 Query: 121 EAAEGQMWCDV------GFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 A Q V G L D AG++ F + + G Sbjct: 109 MVARNQQEAHVHVAQYASITTGRTSEQLVDF-----AGIKAAGAFAVSNDGSGVQTAGTM 163 Query: 175 YIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRP--DSFEIDAINLI 232 + A++ A+ + H E + + +++ P D + IN + Sbjct: 164 FA--AMQGAAKVGLPLAAHVEDDSLY------------HHGVMNAGPVADRLGLPGINNV 209 Query: 233 LECLR-ARNGPVPPV-----HIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQI 286 E + AR+ + H+ H+++ +++ +IR A+A+G+ VT E H+L + E I Sbjct: 210 SEAAQVARDVMLAEASGVHYHVCHVSTAESLRVIRNAKAAGINVTCEVSPHHLLLCDEDI 269 Query: 287 PDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELK--NLQKGDFFDSWG 344 K PP+RS +R L L +G I + +DH+P T K +++ F + Sbjct: 270 TMDNPMLKMNPPLRSAKDRAALVAGLLDGTIDMIATDHAPHTDAEKQGSMKTAAFGITGI 329 Query: 345 GIASVGLGLPLMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKH 404 A L L+ T+ +L ++ + GL + G + G ADL + D ++ Sbjct: 330 ETAFATLYTALVKTRLLTLGRLIELMSTRPTELFGL-NTAGRLVVGAPADLTIIDLDHQY 388 Query: 405 KISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 +I +++ K + + G V G VL T++ G++ Y Sbjct: 389 EIEAATMLSKGHNSPFIGWPVYGNVLMTLVDGKLAY 424 >gi|3298139|gnl|PID|d1032316 (AB010284) dihydroorotase [Trypanosoma cruzi] >gi|4210454|gnl|PID|d1038255 (AB017765) DHOase [Trypanosoma cruzi] Length = 419 Score = 101 bits (250), Expect = 8e-21 Identities = 90/307 (29%), Positives = 139/307 (44%), Gaps = 26/307 (8%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LP LVD HVH EPG + ++AA +GG+ V DMP N PPT + F K+ Sbjct: 45 LPVLVDCHVHFREPGLEQKGDMRSESEAAYAGGIGVVCDMP-NTKPPTQTITAFTEKVRR 103 Query: 123 AEG-QMWCDVGFWGGLVPH-NLPDLIPLV--------KAGVRGFKGFLLDSGVEEFPPIG 172 A+ + CD+ + G H +L +L L+ KA VR LD+ E Sbjct: 104 AKAVEKLCDIRLFFGATAHEHLQELETLLTQPQHAALKAPVR--TELYLDTPWEL----- 156 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPKA-HEDQQQPEQSHREYSSFLSSRPDSFEIDAINL 231 K + L T L A H D+ + L + P E +I Sbjct: 157 KSSADVTEPPLTLWQTCHSARGALEHATHNDEACSANPYTGSPVALIATPVHSESASIAY 216 Query: 232 ILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAT 291 +E R R+G +H+ HL++ + + L+R+ARA GL VTTE H+L + Sbjct: 217 GIELAR-RHGT--RLHVAHLSTGEGLELVRQARAEGLHVTTEVTAHHLFLTTGDYGCCGA 273 Query: 292 YFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGL 351 K PP+R + + LW+ + +G + + +DH+P T E +K D + G+ S+ + Sbjct: 274 RVKVNPPVRPPEHHERLWEGVLDGTVNCIGTDHAPHTLE----EKSDATNPPSGMPSIEV 329 Query: 352 GLPLMFT 358 +PL+ T Sbjct: 330 VVPLLLT 336 >gi|7331|emb|CAA32782| (X14634) PYR1-3B multifunctional enzyme (1014 AA) [Dictyostelium discoideum] Length = 1014 Score = 99.5 bits (244), Expect = 4e-20 Identities = 102/398 (25%), Positives = 167/398 (41%), Gaps = 56/398 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGLVD HVHL EPG T E +++GT A++GG T V MP N P + +F + Sbjct: 261 LPGLVDVHVHLREPGATHKEDWDSGTATALAGGFTMVGAMP-NTNPAIMDDASFELCKSL 319 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 A + CD G + G N + G K +L E F P+ +++ + V Sbjct: 320 AASKARCDYGIFIGATFTNTTTAGKFASDAM-GMKMYL----EETFAPLP---LKDDINV 371 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 D +M + P + D + AI L+L + ++ Sbjct: 372 W--RDHIMNWPGTTP-------------------ICVHADGRNLAAI-LLLGWMYDKH-- 407 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 +H+ H++ + I +IR A+ G+ ++ E H+L + + IP GA + P + + Sbjct: 408 ---MHVCHVSHKEEIDIIRDAKKRGMKLSCEVSPHHLTLCDKDIPRIGAGQSEVRPKLGT 464 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 E + LWD + I + +DH+P T E K K G + LPLM T Sbjct: 465 EEDLNALWDNI--DYIDMIATDHAPHTWEEKCSAKPP-----PGFPGLETSLPLMLTAVH 517 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 ++ D+V N L Q T + D + I +Y + Sbjct: 518 NGRITIEDLVMKMHTNPIRIFNLPEQPDTY--------IEVDMEQEWTIPKKPLYSRCGW 569 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTL 455 T + G+ V+G V+K +LRGQ+ + + +++ G L Sbjct: 570 TPFEGLQVRGKVVKVVLRGQIAFIDGKIIAQKGFGLNL 607 >gi|279582|pir||QZDOP3 pyrimidine synthesis protein PYR1-3 - slime mold (Dictyostelium discoideum) (fragments) Length = 1481 Score = 99.5 bits (244), Expect = 4e-20 Identities = 102/398 (25%), Positives = 167/398 (41%), Gaps = 56/398 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGLVD HVHL EPG T E +++GT A++GG T V MP N P + +F + Sbjct: 728 LPGLVDVHVHLREPGATHKEDWDSGTATALAGGFTMVGAMP-NTNPAIMDDASFELCKSL 786 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 A + CD G + G N + G K +L E F P+ +++ + V Sbjct: 787 AASKARCDYGIFIGATFTNTTTAGKFASDAM-GMKMYL----EETFAPLP---LKDDINV 838 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 D +M + P + D + AI L+L + ++ Sbjct: 839 W--RDHIMNWPGTTP-------------------ICVHADGRNLAAI-LLLGWMYDKH-- 874 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 +H+ H++ + I +IR A+ G+ ++ E H+L + + IP GA + P + + Sbjct: 875 ---MHVCHVSHKEEIDIIRDAKKRGMKLSCEVSPHHLTLCDKDIPRIGAGQSEVRPKLGT 931 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 E + LWD + I + +DH+P T E K K G + LPLM T Sbjct: 932 EEDLNALWDNI--DYIDMIATDHAPHTWEEKCSAKPP-----PGFPGLETSLPLMLTAVH 984 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 ++ D+V N L Q T + D + I +Y + Sbjct: 985 NGRITIEDLVMKMHTNPIRIFNLPEQPDTY--------IEVDMEQEWTIPKKPLYSRCGW 1036 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTL 455 T + G+ V+G V+K +LRGQ+ + + +++ G L Sbjct: 1037 TPFEGLQVRGKVVKVVLRGQIAFIDGKIIAQKGFGLNL 1074 >gi|400909|sp|P20054|PYR1_DICDI PROTEIN PYR1-3 (CONTAINS: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE , ASPARTATE CARBAMOYLTRANSFERASE , DIHYDROOROTASE Length = 2185 Score = 99.5 bits (244), Expect = 4e-20 Identities = 102/398 (25%), Positives = 167/398 (41%), Gaps = 56/398 (14%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPGLVD HVHL EPG T E +++GT A++GG T V MP N P + +F + Sbjct: 1432 LPGLVDVHVHLREPGATHKEDWDSGTATALAGGFTMVGAMP-NTNPAIMDDASFELCKSL 1490 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 A + CD G + G N + G K +L E F P+ +++ + V Sbjct: 1491 AASKARCDYGIFIGATFTNTTTAGKFASDAM-GMKMYL----EETFAPLP---LKDDINV 1542 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 D +M + P + D + AI L+L + ++ Sbjct: 1543 W--RDHIMNWPGTTP-------------------ICVHADGRNLAAI-LLLGWMYDKH-- 1578 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCCPPIRS 301 +H+ H++ + I +IR A+ G+ ++ E H+L + + IP GA + P + + Sbjct: 1579 ---MHVCHVSHKEEIDIIRDAKKRGMKLSCEVSPHHLTLCDKDIPRIGAGQSEVRPKLGT 1635 Query: 302 ESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ-- 359 E + LWD + I + +DH+P T E K K G + LPLM T Sbjct: 1636 EEDLNALWDNI--DYIDMIATDHAPHTWEEKCSAKPP-----PGFPGLETSLPLMLTAVH 1688 Query: 360 --GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKL 417 ++ D+V N L Q T + D + I +Y + Sbjct: 1689 NGRITIEDLVMKMHTNPIRIFNLPEQPDTY--------IEVDMEQEWTIPKKPLYSRCGW 1740 Query: 418 TAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLGQTL 455 T + G+ V+G V+K +LRGQ+ + + +++ G L Sbjct: 1741 TPFEGLQVRGKVVKVVLRGQIAFIDGKIIAQKGFGLNL 1778 >gi|3914520|sp|Q59712|PYR2_PSEPU DIHYDROOROTASE-LIKE PROTEIN (ASPARTATE CARBAMOYLTRANSFERASE 44 KD NON-CATALYTIC CHAIN) >gi|1360920|pir||B56144 aspartate carbamoyltransferase (EC 2.1.3.2) 44k noncatalytic chain - Pseudomonas putida (strain PpN) >gi|151524 (M97254) dihydro-orotase [Pseudomonas putida] Length = 424 Score = 97.5 bits (239), Expect = 2e-19 Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 26/385 (6%) Query: 64 PGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMP-LNAIPPTTNVENFRIKL-- 120 PGLVD V L EPG + + T+AA++GGVT++ P + T V + Sbjct: 55 PGLVDLGVSLREPGYSRKGNIRSETRAAVAGGVTSLCCPPQTRPVLDTLAVAELILDRAR 114 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 EAA +++ GL L +L+ L G F +G+++ P + AL Sbjct: 115 EAANSKVYPIGALTKGLEGEQLAELVALRDTGCVAF-----GNGLKQIP--NNRTLARAL 167 Query: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN---LILECLR 237 + A D ++FH++ E E + + L P+S E A+ L++E Sbjct: 168 EYAATFDLTVVFHSQDRDLAEGGLAHEGAMASFLG-LPGIPESAETVALARNLLLVEQSG 226 Query: 238 ARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCP 297 R H + S + LI +A+ GLPVT + + L + E + ++ + P Sbjct: 227 VR------AHFSQITSARGAQLIAQAQELGLPVTADVALYQLILTDESVRQFSSLYHVQP 280 Query: 298 PIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMF 357 P+R+ +R GL A++ GVI ++ S H P ++ + F + GI+SV L LPL Sbjct: 281 PLRTAKDRDGLRAAVKSGVIQAISSHHQ---PHERDAKLAPFGATEPGISSVELLLPLAM 337 Query: 358 T-QGCSLVDIVTWCCK-NTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKN 415 T L+D+ T + ++ L G + G ADLV+FD + ++ + Sbjct: 338 TLVQDGLLDLPTLLARLSSGPAAALRVPAGELKVGGAADLVLFDPQAS-TVAGEQWSSRG 396 Query: 416 KLTAYNGMTVKGTVLKTILRGQVVY 440 + + G + G V T++ G V + Sbjct: 397 ENCPFIGHCLPGAVRYTLVDGHVCH 421 >gi|3875382|emb|CAA91059| (Z54284) similar to glutamine-dependent carbamoyl-phosphate synthase, aspartate carbamoyltransferase, dihydroorotase; cDNA EST EMBL:M89128 comes from this gene; cDNA EST EMBL:D33798 comes from this gene; cDNA EST EMBL:D65291 co... Length = 2198 Score = 97.1 bits (238), Expect = 2e-19 Identities = 97/375 (25%), Positives = 154/375 (40%), Gaps = 48/375 (12%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPG+VD HVH+ EPG T E + T ++AA++GGVTT++ MP N P + ++F + Sbjct: 1476 LPGMVDIHVHVREPGATHKEDWATCSKAALAGGVTTILAMP-NTSPVLVDTDSFYQTEQL 1534 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 A + D + G P+N G K +L E F + + I + K Sbjct: 1535 ASAKSVVDYALYIGATPNNSKFAAEFADKAA-GLKMYLN----ETFSTLKMDNISDWAKH 1589 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 L S+F ++RP + L A+ Sbjct: 1590 L------------------------------SAFPANRPIVCHAEKQTLAAILCMAQMAN 1619 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSE 302 VHI H+A+ I L+++A+ G VT E C H+L + E +PDG + P + Sbjct: 1620 -RAVHIAHVATADEINLVKEAKQRGWNVTCEVCPHHLFLIEEDLPDGIREVR--PRLVKP 1676 Query: 303 SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGCS 362 +RQ LWD + I +DH+P T K + G + G+ + LPL+ T Sbjct: 1677 EDRQALWDNME--YIDCFATDHAPHTWAEKTGKDGKIPPGFPGVEYM---LPLLLT---- 1727 Query: 363 LVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNG 422 V K + ++ + ++ P D + D + I + K T + G Sbjct: 1728 AVHDGKLTMKELTDRMSTNPRRIFNLPPQDDTYIEVDLNEEWTIPENGGQSKAGWTPFAG 1787 Query: 423 MTVKGTVLKTILRGQ 437 V G V I+RG+ Sbjct: 1788 RKVFGKVHNVIIRGE 1802 >gi|3914519|sp|Q51551|PYR2_PSEAE DIHYDROOROTASE-LIKE PROTEIN (ASPARTATE CARBAMOYLTRANSFERASE 44 KD NON-CATALYTIC CHAIN) >gi|309886 (L19649) dihydroorotase-like [Pseudomonas aeruginosa] Length = 423 Score = 96.3 bits (236), Expect = 4e-19 Identities = 102/386 (26%), Positives = 169/386 (43%), Gaps = 30/386 (7%) Query: 65 GLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVV----DMPLNAIPPTTNVENFRIKL 120 GLVD V L EPG E+ T+AA +GG T++ P+ P + R + Sbjct: 56 GLVDLSVALREPGYGRKGNVESETRAAAAGGTTSLCCPPYTRPVLDTPAVAELILDRAR- 114 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEAL 180 EA +++ G L +L+ L G F +G+ F + AL Sbjct: 115 EAGNAKVYPIGALTRGFGGEQLSELVALRDTGCVAFT-----NGLHGFA--SNRILRRAL 167 Query: 181 KVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN---LILECLR 237 + A D ++F ++ E E + L+ P++ E A+ L++E Sbjct: 168 EYAATFDLTVIFTSQDTDLAEGGLAHEGPTASFLG-LAGIPETAETVALARNLLLVEQSG 226 Query: 238 ARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCP 297 R H L S + I L+ +A+A GLPVT + + L + E + ++ + P Sbjct: 227 VR------AHFSQLTSARGIELVAQAQARGLPVTCDVALYQLILTDEALVGFSSLYHVQP 280 Query: 298 PIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMF 357 P+R+ ++R+ L +A+ GV+ ++ S H P P+ KN F + GI+ L LPL Sbjct: 281 PLRTRADREALREAVNNGVVQAIASHHQPHEPDAKN---APFAATEPGISGAELLLPLAM 337 Query: 358 T-QGCSLVDIVTWCCKNTSH--QVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVYFK 414 T L+D+ T + SH L G +A G ADLV+FD ++ S Y K Sbjct: 338 TLVQDGLLDLPTLLAR-LSHGPAQALRLPAGRLAVGQAADLVLFDPQGS-TLAGESWYSK 395 Query: 415 NKLTAYNGMTVKGTVLKTILRGQVVY 440 + + + G + G V T++ G + + Sbjct: 396 GQNSPFVGHCLPGRVRYTLVDGHLTH 421 >gi|3122032|sp|Q18677|DPY1_CAEEL HYPOTHETICAL 56.3 KD PROTEIN C47E12.8 IN CHROMOSOME IV >gi|3875109|emb|CAA93104| (Z68882) predicted using Genefinder; Similarity to Mouse Ulip protein (PIR Acc. No. S55525) [Caenorhabditis elegans] Length = 520 Score = 95.6 bits (234), Expect = 6e-19 Identities = 112/449 (24%), Positives = 188/449 (40%), Gaps = 50/449 (11%) Query: 34 VLEGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEP--GRTSWEGFETGTQAA 91 VL+G +V I + + + ++PG +D H H+ P G + + F GT+AA Sbjct: 23 VLDGRIVEIAPSIQPTPGLEVVDATDRLVIPGGIDPHTHMQLPFMGEIAKDDFHRGTEAA 82 Query: 92 ISGGVTTVVDMPLNAIPPTTNVENFRIKLEA----AEGQMWCDVGF------WGGLVPHN 141 ++GG T ++D IP T E+ + + A+ ++ CD G WG + Sbjct: 83 VAGGTTMIIDF---VIP--TKGESLLVAYDRWRGWADPKVVCDYGLSMAITSWGPEIAKE 137 Query: 142 LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPK--A 199 + +++ + G+ FK FL +GV F +E+ + ++ A+ + HAE A Sbjct: 138 M-EIVTGAEYGINSFKFFLAYAGV--FMVRDEEFYQGMIQC-AKLRALARVHAENGSVIA 193 Query: 200 HEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPL 259 + SRP+ E +A C A P +++VH+ S A Sbjct: 194 ERCEHLLSSGITGPEGHTQSRPEELEAEAT--FRACTMASQANCP-LYVVHVMSKGAAAA 250 Query: 260 IRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK----------CCPPI-RSESNRQGL 308 I R G V E IAA DG+ Y+ PP+ R S L Sbjct: 251 IAHHRKKGAVVFGEP------IAAGLATDGSHYYNEDWLHAARYVMSPPLSRDPSTPSAL 304 Query: 309 WDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQG--CSLVDI 366 L G + +D+ + K+L K DF G+ V + +++ +G ++D Sbjct: 305 MKLLAAGELHLTATDNCTFDCQQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDP 364 Query: 367 VTWCCKNTSHQVGLSH---QKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGM 423 + + ++ + + QKG IA G DAD+V+++ + IS + + + GM Sbjct: 365 MRFVAVTSTMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISKDTHHHAIDFNIFEGM 424 Query: 424 TVKGTVLKTILRGQVVYTNANGVSKTPLG 452 V G TI RG+ V+ ANG KT G Sbjct: 425 QVHGVPEITISRGRTVW--ANGQLKTVQG 451 >gi|3122039|sp|Q63150|DPYS_RAT DIHYDROPYRIMIDINASE (DHPASE) (HYDANTOINASE) >gi|2143701|pir||S70581 dihydropyrimidinase - rat >gi|1378019|gnl|PID|d1010479 (D63704) dihydropyrimidinase [Rattus norvegicus] Length = 519 Score = 94.0 bits (230), Expect = 2e-18 Identities = 109/420 (25%), Positives = 168/420 (39%), Gaps = 71/420 (16%) Query: 62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPP--TTNVENFR 117 +LPG +D+H H+ P G S + F GT+AA++GG T ++D AIP ++ +E F Sbjct: 59 VLPGGIDTHTHMQFPFMGSQSVDDFHQGTKAALAGGTTMIIDF---AIPQKGSSLIEAFE 115 Query: 118 IKLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLD--------- 162 A+ ++ CD V +W V + L GV FK F+ Sbjct: 116 TWRNWADPKVCCDYSLHVAVTWWSDKVKEEMKTLAQ--DKGVNSFKMFMAYKDLYMVQDQ 173 Query: 163 ------SGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSF 216 S +E I + + E + M+ P+ HE Sbjct: 174 QMYAAFSQCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHE--------------- 218 Query: 217 LSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCF 276 RP++ E +A + A N P+ +IVH+ S A +I A+ G V E Sbjct: 219 -LCRPEAVEAEATLRAITIASAVNCPL---YIVHVMSKSAAKVIADAKREGKVVYGEP-- 272 Query: 277 HYLCIAAEQIPDGATYFK----------CCPPIRSESNRQG-LWDALREGVIGSVVSDHS 325 IAA DG Y+ PP+R + + G L + L G + + SD+ Sbjct: 273 ----IAAGLGTDGTQYWNKEWRHAAHHVMGPPLRPDPSTPGFLMNLLANGDLTTTGSDNC 328 Query: 326 PCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGL 380 K L K DF G+ V + +++ +G + V N + L Sbjct: 329 TFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNL 388 Query: 381 SHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 +KG IA G DAD+V++D + IS + + + GM G L TI RG+VVY Sbjct: 389 YPKKGRIAVGSDADMVIWDPEATRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGRVVY 448 >gi|3122049|sp|Q14117|DPYS_HUMAN DIHYDROPYRIMIDINASE (DHPASE) (HYDANTOINASE) (DHP) >gi|1330236|gnl|PID|d1011851 (D78011) dihydropyrimidinase [Homo sapiens] >gi|3608122|gnl|PID|d1034033 (AB004678) dihydropyrimidinase [Homo sapiens] Length = 519 Score = 90.5 bits (221), Expect = 2e-17 Identities = 109/420 (25%), Positives = 164/420 (38%), Gaps = 71/420 (16%) Query: 62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTN--VENFR 117 +LPG +D+H H+ P G S + F GT+AA+SGG T ++D AIP +E F Sbjct: 59 VLPGGIDTHTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDF---AIPQKGGSLIEAFE 115 Query: 118 IKLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLD--------- 162 A+ ++ CD V +W V + L+ GV FK F+ Sbjct: 116 TWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQ--DKGVNSFKMFMAYKDLYMVTDL 173 Query: 163 ------SGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSF 216 S +E I + + E + M+ P+ HE Sbjct: 174 ELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHE--------------- 218 Query: 217 LSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCF 276 RP++ E +A + A N P+ +IVH+ S A +I AR G V E Sbjct: 219 -LCRPEAVEAEATLRAITIASAVNCPL---YIVHVMSKSAAKVIADARRDGKVVYGEP-- 272 Query: 277 HYLCIAAEQIPDGATYFK----------CCPPIRSE-SNRQGLWDALREGVIGSVVSDHS 325 IAA DG Y+ PP+R + S L + L + + +D+ Sbjct: 273 ----IAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNC 328 Query: 326 PCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGL 380 K L K DF G+ V + +++ +G + V N + L Sbjct: 329 TFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNL 388 Query: 381 SHQKGTIAPGYDADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 +KG IA G DAD+V++D IS + + + GM G L TI RG+VVY Sbjct: 389 YPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVY 448 >gi|1621263|emb|CAB02642| (Z81011) pyrC [Mycobacterium tuberculosis] Length = 430 Score = 89.7 bits (219), Expect = 4e-17 Identities = 104/395 (26%), Positives = 167/395 (41%), Gaps = 40/395 (10%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDM----PLNAIPPTTNVENFR 117 +LPG VD H HL EPGR E ETG+ AA GG T V M P+ P T+ R Sbjct: 49 LLPGFVDLHTHLREPGREYAEDIETGSAAAALGGYTAVFAMANTNPVADSPVVTDHVWHR 108 Query: 118 IKLEAAEGQM--WCDVGFWG----GLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPI 171 GQ DV G GL L ++ ++ AG + F D GV P+ Sbjct: 109 -------GQQVGLVDVHPVGAVTVGLAGAELTEM-GMMNAGAAQVRMFS-DDGVCVHDPL 159 Query: 172 GKEYIEEALKVLAEEDTMMMFHAELPK------AHEDQQQPEQSHREYSSFLSSRPDSFE 225 + AL+ ++ HAE P+ AHE L+ P + E Sbjct: 160 ---IMRRALEYATGLGVLIAQHAEEPRLTVGAVAHEGPMAARLG-------LAGWPRAAE 209 Query: 226 IDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQ 285 + + L AR+ VHI H ++ + +++ A+ G+ +T E H+L + + Sbjct: 210 ESIV--ARDALLARDAGAR-VHICHASAAGTVEILKWAKDQGISITAEVTPHHLLLDDAR 266 Query: 286 IPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGG 345 + + PP+R S+ L AL +G+I V +DH+P K ++ G Sbjct: 267 LASYDGVNRVNPPLREASDAVALRQALADGIIDCVATDHAPHAEHEKCVEFAAARPGMLG 326 Query: 346 I-ASVGLGLPLMFTQG-CSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASK 403 + ++ + + M G S DI +N + L Q + G A+L V D + Sbjct: 327 LQTALSVVVQTMVAPGLLSWRDIARVMSENPACIARLPDQGRPLEVGEPANLTVVDPDAT 386 Query: 404 HKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQV 438 ++ + + ++ T + M++ TV T+LRG+V Sbjct: 387 WTVTGADLASRSANTPFESMSLPATVTATLLRGKV 421 >gi|3122041|sp|O13022|DPY3_XENLA DIHYDROPYRIMIDINASE RELATED PROTEIN-3 (DRP-3) (NEURAL SPECIFIC PROTEIN 1) >gi|2078081|emb|CAA73509| (Y13069) neural specific protein [Xenopus laevis] Length = 571 Score = 82.7 bits (201), Expect = 5e-15 Identities = 105/465 (22%), Positives = 188/465 (39%), Gaps = 48/465 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITS+ ++I G IV +S +E ++ + + I + T+E + Sbjct: 9 IPRITSERLLIKGGR----IVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIE-ANGK 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H HL P G T+ + F GT+AA++GG T +VD + P + E F Sbjct: 64 MVIPGGIDVHTHLQMPYRGMTTVDDFLQGTKAALAGGTTMIVDHVIPE-PEASLTEAFEK 122 Query: 119 KLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+G+ CD + W V + L+ +G F++ ++ + Sbjct: 123 WREWADGKTCCDYSLHVDITHWSDSVKQEVETLVKQ-----KGVNSFMVYMAYKDLYQMS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 + E L + HAE A E + E + SRP+ E +A+ Sbjct: 178 NTELYEIFTFLGSLGAIAQVHAENGDIIAQEQNRMLELGITGPEGHVLSRPEELEAEAVF 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P+ ++ + S ++ LI +AR G V E I A DG Sbjct: 238 RAIIIASQTNCPL---YVTKVMSKSSVDLISQARKKGYVVFGEP------ITASLGTDGT 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDAL-REGVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H+ + K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQVTGSAHATFSTAQKAIGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G + + +++ + + + V+ N + L +KG IA G D+D Sbjct: 349 TLIPEGTNGIEERMSVIWDKSVATGKMDENQFVSVTSTNAAKIFNLYPRKGRIAVGSDSD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439 LV++D + +S S + + + GM ++G L I +G+++ Sbjct: 409 LVIWDPDAVKIVSAKSHHSAAEYNIFEGMELRGAPLVVICQGKIM 453 >gi|3122036|sp|Q90635|DPY2_CHICK DIHYDROPYRIMIDINASE RELATED PROTEIN-2 (DRP-2) (COLLAPSIN RESPONSE MEDIATOR PROTEIN CRMP-62) >gi|2134319|pir||S58889 collapsin response mediator protein, 62K - chicken >gi|882147 (U17277) CRMP-62 [Gallus gallus] >gi|1582081|prf||2117410A collapsin response mediator protein:ISOTYPE=CRMP-62 [Gallus gallus] Length = 572 Score = 82.3 bits (200), Expect = 6e-15 Identities = 115/470 (24%), Positives = 182/470 (38%), Gaps = 48/470 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I + T+E Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIE-AHGR 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H P G TS + F GT+AA++GG T ++D + P T+ + F Sbjct: 64 MVIPGGIDVHTRFQMPEQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGTSLLTAFDQ 122 Query: 119 KLEAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+ + CD W V + L+ G FL+ ++ + Sbjct: 123 WREWADSKSCCDYSLHVDITEWHKGVQEEMEALVK-----DHGVNSFLVYMAFKDRFQLS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 I E L V+ + HAE A E Q+ E + SRP+ E +A+N Sbjct: 178 DSQIYEVLSVIRDIGATAQVHAENGDIIAEEQQRILELGITGPEGHVLSRPEEVEAEAVN 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P++I + S A +I +AR G V E I A DG+ Sbjct: 238 RAITIANQTN---CPLYITKVMSKSAAEVIAQARKKGTVVYGEP------ITASLGTDGS 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDALRE-GVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMF-----TQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G + +++ T V N + L +KG IA G DAD Sbjct: 349 TLIPEGTNGTEERMSIIWDKAVVTGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDAD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 LV++D S IS + + + GM +G+ L I +G++V + N Sbjct: 409 LVIWDPDSVKTISAKTHNISLEYNIFEGMECRGSPLVVISQGKIVLEDGN 458 >gi|2342488|gnl|PID|d1022745 (AB006714) dihydropyrimidinase related protein 1 [Mus musculus] Length = 572 Score = 82.3 bits (200), Expect = 6e-15 Identities = 116/473 (24%), Positives = 195/473 (40%), Gaps = 51/473 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIRGGR-----IINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G TS + F GT+AA++GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ ++ + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYM---AYKDLYQMSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 IAIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN-GVSK 448 ++D I+ S + + GM G+ L I +G++V+ + N VSK Sbjct: 411 IWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSK 463 >gi|1536909|emb|CAA69153| (Y07818) ULIP [Homo sapiens] Length = 570 Score = 82.3 bits (200), Expect = 6e-15 Identities = 106/470 (22%), Positives = 188/470 (39%), Gaps = 48/470 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + + I + T+E + Sbjct: 9 IPRITSDRLLIKGGR----IVNDDQSFYADIYMEDGLIKQIGDNVIVPGGVKTIE-ANGK 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H H P G T+ + F GT+AA++GG T ++D + P ++ E + Sbjct: 64 MVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPE-PESSLTEAYEK 122 Query: 119 KLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+G+ CD + W V + +LI +G F++ ++ + Sbjct: 123 WREWADGKSCCDYALHVDIAHWNDSVKQEVQNLIK-----DKGVNSFMVYMAYKDLYQVS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 + E L E + HAE A E + E + SRP+ E +A+ Sbjct: 178 NTELYEIFTCLGELGAIAQVHAENGDIIAQEQTRMLEMGITGPEGHVLSRPEELEAEAVF 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P+ ++ + S A LI +AR G V E I A DG Sbjct: 238 RAITIASQTNCPL---YVTKVMSKSAADLISQARKKGNVVFGEP------ITASLGIDGT 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDAL-REGVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H + K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G V + +++ + + + V N + L +KG I+ G D+D Sbjct: 349 TAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRISVGSDSD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 LV++D + +S + + + GM ++G L I +G+++ + N Sbjct: 409 LVIWDPDAVKIVSAKNHQSAAEYNIFEGMELRGAPLVVICQGKIMLEDGN 458 >gi|3122030|sp|P97427|DPY1_MOUSE DIHYDROPYRIMIDINASE RELATED PROTEIN-1 (DRP-1) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 1) (CRMP-1) (ULIP3 PROTEIN) >gi|1763259 (U72875) collapsin response mediator 1 [Mus musculus] Length = 572 Score = 82.3 bits (200), Expect = 6e-15 Identities = 116/473 (24%), Positives = 195/473 (40%), Gaps = 51/473 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIRGGR-----IINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G TS + F GT+AA++GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ ++ + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYM---AYKDLYQMSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 IAIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN-GVSK 448 ++D I+ S + + GM G+ L I +G++V+ + N VSK Sbjct: 411 IWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSK 463 >gi|3122050|sp|Q14195|DPY3_HUMAN DIHYDROPYRIMIDINASE RELATED PROTEIN-3 (DRP-3) (UNC-33-LIKE PHOSPHOPROTEIN) (ULIP PROTEIN) >gi|1330242|gnl|PID|d1011854 (D78014) dihydropyrimidinase related protein-3 [Homo sapiens] Length = 570 Score = 81.5 bits (198), Expect = 1e-14 Identities = 106/470 (22%), Positives = 188/470 (39%), Gaps = 48/470 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + + I + T+E + Sbjct: 9 IPRITSDRLLIKGGR----IVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIE-ANGK 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H H P G T+ + F GT+AA++GG T ++D + P ++ E + Sbjct: 64 MVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPE-PESSLTEAYEK 122 Query: 119 KLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+G+ CD + W V + +LI +G F++ ++ + Sbjct: 123 WREWADGKSCCDYALHVDITHWNDSVKQEVQNLIK-----DKGVNSFMVYMAYKDLYQVS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 + E L E + HAE A E + E + SRP+ E +A+ Sbjct: 178 NTELYEIFTCLGELGAIAQVHAENGDIIAQEQTRMLEMGITGPEGHVLSRPEELEAEAVF 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P+ ++ + S A LI +AR G V E I A DG Sbjct: 238 RAITIASQTNCPL---YVTKVMSKSAADLISQARKKGNVVFGEP------ITASLGIDGT 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDAL-REGVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H + K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G V + +++ + + + V N + L +KG I+ G D+D Sbjct: 349 TAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRISVGSDSD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 LV++D + +S + + + GM ++G L I +G+++ + N Sbjct: 409 LVIWDPDAVKIVSAKNHQSAAEYNIFEGMELRGAPLVVICQGKIMLEDGN 458 >gi|3122017|sp|Q62950|DPY1_RAT DIHYDROPYRIMIDINASE RELATED PROTEIN-1 (DRP-1) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 1) (CRMP-1) >gi|1399538 (U52102) rCRMP-1 [Rattus norvegicus] Length = 572 Score = 81.5 bits (198), Expect = 1e-14 Identities = 115/473 (24%), Positives = 195/473 (40%), Gaps = 51/473 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIRGGR-----IINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G TS + F GT+AA++GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTSADDFFQGTRAALAGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ ++ + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYM---AYKDLYQMSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 IAIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN-GVSK 448 ++D ++ S + + GM G+ L I +G++V+ + N VSK Sbjct: 411 IWDPDKMKTLTAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSK 463 >gi|1518520 (U52095) collapsin response mediator protein [Rattus norvegicus] Length = 572 Score = 81.5 bits (198), Expect = 1e-14 Identities = 115/473 (24%), Positives = 195/473 (40%), Gaps = 51/473 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIRGGR-----IINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G TS + F GT+AA++GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTSADDFFQGTRAALAGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ ++ + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYM---AYKDLYQMSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 IAIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN-GVSK 448 ++D ++ S + + GM G+ L I +G++V+ + N VSK Sbjct: 411 IWDPDKMKTLTAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSK 463 >gi|1915915|emb|CAA70300| (Y09080) Ulip3 protein [Mus musculus] Length = 572 Score = 81.5 bits (198), Expect = 1e-14 Identities = 116/473 (24%), Positives = 195/473 (40%), Gaps = 51/473 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIRGGR-----IINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G TS + F GT+AA++GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ ++ + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYM---AYKDLYQMSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 IAIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSIAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN-GVSK 448 ++D I+ S + + GM G+ L I +G++V+ + N VSK Sbjct: 411 IWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSK 463 >gi|3122052|sp|Q62188|DPY3_MOUSE DIHYDROPYRIMIDINASE RELATED PROTEIN-3 (DRP-3) (UNC-33-LIKE PHOSPHOPROTEIN) (ULIP PROTEIN) >gi|1083556|pir||S55525 Ulip protein - mouse >gi|861059|emb|CAA61082| (X87817) Ulip [Mus musculus] Length = 570 Score = 80.8 bits (196), Expect = 2e-14 Identities = 106/470 (22%), Positives = 187/470 (39%), Gaps = 48/470 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + + I + T+E + Sbjct: 9 IPRITSDRLLIKGGR----IVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIE-ANGK 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H H P G T+ + F GT+AA++GG T ++D + P ++ E + Sbjct: 64 MVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPE-PESSLTEAYEK 122 Query: 119 KLEAAEGQMWCD------VGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+G+ CD + W V + L + +G F++ ++ + Sbjct: 123 WREWADGKSCCDYALHVDITHWNDSVKQEVQSL-----SKEKGVNSFMVYMAYKDLYQVS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 + E L E + HAE A E + E + SRP+ E +A+ Sbjct: 178 NTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVF 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P+ ++ + S A LI +AR G V E I A DG Sbjct: 238 RAITVASQTNCPL---YVTKVMSKSAADLISQARKKGNVVFGEP------ITASLGIDGT 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDAL-REGVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H + K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G V + +++ + + + V N + L +KG IA G D+D Sbjct: 349 TAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 LV++D + +S + + + GM ++G L I +G+++ + N Sbjct: 409 LVIWDPDALKIVSAKNHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGN 458 >gi|3122031|sp|Q14194|DPY1_HUMAN DIHYDROPYRIMIDINASE RELATED PROTEIN-1 (DRP-1) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 1) (CRMP-1) >gi|1330238|gnl|PID|d1011852 (D78012) dihydropyrimidinase related protein-1 [Homo sapiens] Length = 572 Score = 80.0 bits (194), Expect = 3e-14 Identities = 113/468 (24%), Positives = 191/468 (40%), Gaps = 50/468 (10%) Query: 6 ITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSPCTI 62 ITSD ++I G + + + DV LE ++ + E I + T+E + + Sbjct: 12 ITSDRLLIKGGR-----IINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIE-ANGRMV 65 Query: 63 LPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKL 120 +PG +D + +L +P G T+ + F GT+AA+ GG T ++D + P ++ + +F Sbjct: 66 IPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPE-PGSSLLTSFEKWH 124 Query: 121 EAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKE 174 EAA+ + CD W V L L+ GV F+ ++ V + + Sbjct: 125 EAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYMAYKDVYQ---MSDS 179 Query: 175 YIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLI 232 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 180 QLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRA 239 Query: 233 LECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY 292 + N PV +I + S A +I AR G V E IAA DG Y Sbjct: 240 ITIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTHY 290 Query: 293 ----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFFD 341 F PP+ + L L G + S H P + K + K +F Sbjct: 291 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTL 350 Query: 342 SWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 G+ + + +++ + + + V N + L +KG IA G DAD+V Sbjct: 351 IPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVV 410 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 ++D I+ S + + GM G+ L I +G++V+ + N Sbjct: 411 IWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGN 458 >gi|3122018|sp|O02675|DPY2_BOVIN DIHYDROPYRIMIDINASE RELATED PROTEIN-2 (DRP-2) (NEURAL SPECIFIC PROTEIN NSP60) >gi|1916227 (U83278) neural specific protein CRMP-2 [Bos taurus] Length = 572 Score = 79.2 bits (192), Expect = 5e-14 Identities = 114/465 (24%), Positives = 182/465 (38%), Gaps = 48/465 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I + T+E S Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRM 64 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H P G TS + F GT+AA++GG T ++D + P T+ + F Sbjct: 65 -VIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGTSLLAAFDQ 122 Query: 119 KLEAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+ + CD W V + L+ G FL+ ++ + Sbjct: 123 WREWADSKSCCDYSLHVDITEWHKGVQEEMEALVK-----DHGVNSFLVYMAFKDRFQLT 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 I E L V+ + + HAE A E Q+ + + SRP+ E +A+N Sbjct: 178 DSQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVN 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P++I + S A +I +AR G V E I A DG+ Sbjct: 238 RSITIANQTN---CPLYITKVMSKSAAEVIAQARKKGTVVYGEP------ITASLGTDGS 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDALRE-GVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMF-----TQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G + +++ T V N + L +KG IA G DAD Sbjct: 349 TLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDAD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439 LV++D S IS + + + GM +G+ L I +G++V Sbjct: 409 LVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIV 453 >gi|3135671 (AF064070) putative dihydroorotase [Burkholderia pseudomallei] Length = 231 Score = 78.0 bits (189), Expect = 1e-13 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 4/224 (1%) Query: 217 LSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCF 276 LS P + E A++ + E +R V H+ L+S + L+R A+A GLPVT + Sbjct: 9 LSGVPVAAETIALHTLFELMRVTGARV---HVARLSSAAGVALVRAAKAEGLPVTCDVGA 65 Query: 277 HYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQK 336 ++L + I F+ PP+R+E +R+ + AL +G I ++ SDH+P + K L Sbjct: 66 NHLHLIDVDIGYFDAQFRLDPPLRAERDREAIRAALADGTIDAICSDHTPVDDDEKLLPF 125 Query: 337 GDFFDSWGGIASVGLGLPLMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLV 396 + G+ + L L + + + + ++ L G I G ADL Sbjct: 126 AEATPGATGLELL-LSLTVKWAREAGVPLARALAAITSAPADVLKLPAGRIGEGAPADLC 184 Query: 397 VFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440 VFD + ++ ++ + T + G + V T++ GQV + Sbjct: 185 VFDPNAHWRVEPRALKSQGHNTPFLGYELPARVCATLVAGQVAF 228 >gi|1351260|sp|P47942|DPY2_RAT DIHYDROPYRIMIDINASE RELATED PROTEIN-2 (DRP-2) (TURNED ON AFTER DIVISION, 64 KD PROTEIN) (TOAD-64) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 2) (CRMP-2) >gi|1083832|pir||S49985 TOAD-64 protein - black rat >gi|599966|emb|CAA86981| (Z46882) TOAD-64 [Rattus rattus] Length = 572 Score = 77.3 bits (187), Expect = 2e-13 Identities = 112/462 (24%), Positives = 184/462 (39%), Gaps = 42/462 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I + T+E S Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRM 64 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H P G TS + F GT+AA++GG T ++D + P T+ + F Sbjct: 65 -VIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGTSLLAAFDQ 122 Query: 119 KLEAAEGQMWCDVGFWGGLVPHN---LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEY 175 E A+ + CD + + ++ LVK G FL+ ++ + Sbjct: 123 WREWADSKSCCDYSLHVDITEWHKGIQEEMEALVKD--HGVNSFLVYMAFKDRFQLTDSQ 180 Query: 176 IEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLIL 233 I E L V+ + + HAE A E Q+ + + SRP+ E +A+N + Sbjct: 181 IYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRSI 240 Query: 234 ECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY- 292 N P+++ + S A +I +AR G V E I A DG+ Y Sbjct: 241 TIANQTN---CPLYVTKVMSKSAAEVIAQARKKGTVVYGEP------ITASLGTDGSHYW 291 Query: 293 ---------FKCCPPIRSESNRQGLWDALRE-GVIGSVVSDHSPCTPELKNLQKGDFFDS 342 F PP+ + ++L G + S H K + K +F Sbjct: 292 SKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLI 351 Query: 343 WGGIASVGLGLPLMF-----TQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVV 397 G + +++ T V N + L +KG I+ G DADLV+ Sbjct: 352 PEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRISVGSDADLVI 411 Query: 398 FDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439 +D S IS + + + GM +G+ L I +G++V Sbjct: 412 WDPDSVKTISAKTHNSALEYNIFEGMECRGSPLVVISQGKIV 453 >gi|3122051|sp|Q16555|DPY2_HUMAN DIHYDROPYRIMIDINASE RELATED PROTEIN-2 (DRP-2) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 2) (CRMP-2) (N2A3) >gi|2134934|pir||S58891 collapsin response mediator protein 2 - human >gi|1244400 (U17279) hCRMP-2 [Homo sapiens] >gi|1330240|gnl|PID|d1011853 (D78013) dihydropyrimidinase related protein-2 [Homo sapiens] >gi|2967519 (U97105) N2A3 [Homo sapiens] Length = 572 Score = 76.9 bits (186), Expect = 3e-13 Identities = 112/465 (24%), Positives = 183/465 (39%), Gaps = 48/465 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I + T+E S Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRM 64 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H P G TS + F GT+AA++GG T ++D + P T+ + F Sbjct: 65 -VIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGTSLLAAFDQ 122 Query: 119 KLEAAEGQMWC------DVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+ + C D+ W + + L+ G FL+ ++ + Sbjct: 123 WREWADSKSCCDYSLHVDISEWHKGIQEEMEALVK-----DHGVNSFLVYMAFKDRFQLT 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 I E L V+ + + HAE A E Q+ + + SRP+ E +A+N Sbjct: 178 DCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVN 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + N P++I + S + +I +AR G V E I A DG+ Sbjct: 238 RAITIANQTN---CPLYITKVMSKSSAEVIAQARKKGTVVYGEP------ITASLGTDGS 288 Query: 291 TY----------FKCCPPIRSESNRQGLWDALRE-GVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + ++L G + S H K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMF-----TQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G + +++ T V N + L +KG IA G DAD Sbjct: 349 TLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDAD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439 LV++D S IS + + + GM +G+ L I +G++V Sbjct: 409 LVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIV 453 >gi|2134933|pir||S58890 collapsin response mediator protein - human >gi|882149 (U17278) hCRMP-1 [Homo sapiens] >gi|1582082|prf||2117410B collapsin response mediator protein:ISOTYPE=CRMP-1 [Gallus gallus] Length = 509 Score = 76.1 bits (184), Expect = 5e-13 Identities = 99/409 (24%), Positives = 166/409 (40%), Gaps = 41/409 (10%) Query: 62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIK 119 ++PG +D + +L +P G T+ + F GT+AA+ GG T ++D + P ++ + +F Sbjct: 2 VIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPE-PGSSLLTSFEKW 60 Query: 120 LEAAEGQMWCDVGF------WGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 EAA+ + CD W V L L+ GV F+ ++ V + + Sbjct: 61 HEAADTKSCCDYSLHVDITSWYDGVREELEVLVQ--DKGVNSFQVYMAYKDVYQ---MSD 115 Query: 174 EYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINL 231 + EA L +++ HAE A E ++ E SRP+ E +A+ Sbjct: 116 SQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFR 175 Query: 232 ILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAT 291 + N PV +I + S A +I AR G V E IAA DG Sbjct: 176 AITIAGRINCPV---YITKVMSKSAADIIALARKKGPLVFGEP------IAASLGTDGTH 226 Query: 292 Y----------FKCCPPIRSESNRQG-LWDALREGVIGSVVSDHSPCTPELKNLQKGDFF 340 Y F PP+ + L L G + S H P + K + K +F Sbjct: 227 YWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFT 286 Query: 341 DSWGGIASVGLGLPLMFTQGCSLVDI-----VTWCCKNTSHQVGLSHQKGTIAPGYDADL 395 G+ + + +++ + + + V N + L +KG IA G DAD+ Sbjct: 287 LIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADV 346 Query: 396 VVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 V++D I+ S + + GM G+ L I +G++V+ + N Sbjct: 347 VIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGN 395 >gi|3122033|sp|Q21773|DPY2_CAEEL HYPOTHETICAL 56.3 KD PROTEIN R06C7.3 IN CHROMOSOME I >gi|3878837|emb|CAA95842| (Z71266) Similarity to Rat TOAD_64 protein (PIR Acc. No. S49985) [Caenorhabditis elegans] Length = 544 Score = 73.7 bits (178), Expect = 2e-12 Identities = 94/404 (23%), Positives = 164/404 (40%), Gaps = 46/404 (11%) Query: 62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVEN---- 115 ++PG +D H H+ P G + + F GT+AA++GG T ++D P N E+ Sbjct: 157 VIPGGIDPHTHMQMPYMGEVTKDDFLKGTEAAVAGGTTMIIDF---CCPDHRNGESLIAG 213 Query: 116 FRIKLEAAEGQMWCDVG------FWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFP 169 + A+ ++ CD G W + +I + GV FK ++ E Sbjct: 214 YNRWRSWADPKVCCDYGLSVAITMWRPETAEQMA-IITSPEFGVNSFKFYM---AYENTL 269 Query: 170 PIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEID 227 + + + ++ A+ + H E ++++ + SRP+ E + Sbjct: 270 MVRDDELFRGMQECAKLRALARVHCENGSVIKEKEIDLLAKGVTGPEGHTQSRPEEIEAE 329 Query: 228 AINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP 287 A N C+ A PV+IVH+ + A I RA G V E IAA Sbjct: 330 ATN--RACVLAAQANC-PVYIVHVMTKGAASAISHHRAQGSIVFGEP------IAAGLAL 380 Query: 288 DGATYFK----------CCPPI-RSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQK 336 DG+ Y+ PP+ R + + L L G + +D+ K+L K Sbjct: 381 DGSHYYNEDWLHAARYVMSPPLSRDPTTPELLMKLLAAGELHLTGTDNCTYDCRQKSLGK 440 Query: 337 GDFFDSWGGIASVGLGLPLMFTQG--CSLVDIVTWCCKNTSHQVGLSH---QKGTIAPGY 391 G+F GI V + +++ +G ++D + + +S + + +KG IA G Sbjct: 441 GNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSSTAAKIFNIYPRKGRIAVGS 500 Query: 392 DADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILR 435 DAD+V+F+ + IS + + + G+ G TI R Sbjct: 501 DADIVIFNPNATRTISKDTHHHNLDFNIFEGINCHGVAEVTISR 544 >gi|3122037|sp|Q62951|DPY4_RAT DIHYDROPYRIMIDINASE RELATED PROTEIN-4 (DRP-4) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 3) (CRMP-3) >gi|1399540 (U52103) rCRMP-3 [Rattus norvegicus] Length = 564 Score = 73.4 bits (177), Expect = 3e-12 Identities = 108/469 (23%), Positives = 186/469 (39%), Gaps = 46/469 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I I T++ Sbjct: 1 IPRITSDRLLIKGGK----IVNDDQSFHADLYVEDGLIKQIGENLIVPGGIKTID-AHGL 55 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVD--MPLNAIPPTTNVENF 116 +LPG VD H L P G T + F GT+AA++GG T ++D P + E + Sbjct: 56 MVLPGGVDVHTRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDAGVSLLAAYEQW 115 Query: 117 RIKLEAA---EGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 R + ++A + + D+ W L L+ +G FL+ ++ Sbjct: 116 RERADSAACCDYSLHVDIPRWHESTKEELEALVR-----DKGVNSFLVFMAYKDRCQCTD 170 Query: 174 EYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDAINL 231 I E ++ + + HAE E++Q+ EQ + S P+ E +A+ Sbjct: 171 GQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQGITGPEGHVLSHPEEVEAEAVYR 230 Query: 232 ILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAT 291 + + N P+ +I + S A ++ +A+ G+ V E I A DG+ Sbjct: 231 AVTIAKQANCPL---YITKVMSKGAADMVAQAKRRGVVVFGEP------ITASLGTDGSH 281 Query: 292 Y----------FKCCPPIRSE-SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFF 340 Y F PPI + + L L G + S H T K + K +F Sbjct: 282 YWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTFTTAQKAVGKDNFT 341 Query: 341 DSWGGIASVGLGLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYDADL 395 GI + + +++ + + + V N + +KG +A G DADL Sbjct: 342 LIPEGINGIEERMSVVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADL 401 Query: 396 VVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 V+++ + IS S + + G+ +G I +G+VV + N Sbjct: 402 VIWNPRATKVISAKSHNLNVEYNIFEGVECRGMPTVVISQGRVVLEDGN 450 >gi|3122040|sp|O08553|DPY2_MOUSE DIHYDROPYRIMIDINASE RELATED PROTEIN-2 (DRP-2) (ULIP 2 PROTEIN) >gi|1915913|emb|CAA71370| (Y10339) Ulip2 protein [Mus musculus] Length = 572 Score = 73.4 bits (177), Expect = 3e-12 Identities = 110/462 (23%), Positives = 182/462 (38%), Gaps = 42/462 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I + T+E S Sbjct: 9 IPPITSDRLLIKGGK----IVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRM 64 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H P G TS + F GT+AA++GG T ++D + P T+ + F Sbjct: 65 -VIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPE-PGTSLLAAFDQ 122 Query: 119 KLEAAEGQMWCDVGFWGGLVPHN---LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEY 175 E A+ + CD + + ++ LVK G FL+ ++ + Sbjct: 123 WREWADSKSCCDYSLHVDITEWHKGIQEEMEALVKD--HGVNSFLVYMAFKDRFQLTDSQ 180 Query: 176 IEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDAINLIL 233 I E L V+ + + HAE + QQ + + SRP+ E +A+N + Sbjct: 181 IYEVLSVIRDIGAIAQVHAENGDIIAEAQQRILDLGITGPEGHVLSRPEEVEAEAVNRSI 240 Query: 234 ECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATY- 292 N P+++ + A +I +AR G V E I A DG+ Y Sbjct: 241 TIANQTN---CPLYVTKVMPKSAAEVIAQARKKGTVVYGEP------ITASLGTDGSHYW 291 Query: 293 ---------FKCCPPIRSESNRQGLWDALRE-GVIGSVVSDHSPCTPELKNLQKGDFFDS 342 F PP+ + ++L G + S H K + K +F Sbjct: 292 SKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLI 351 Query: 343 WGGIASVGLGLPLMF-----TQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVV 397 G + +++ T V N + L +KG I+ G DADLV+ Sbjct: 352 PEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRISVGSDADLVI 411 Query: 398 FDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439 +D S IS + + + GM +G+ L I +G++V Sbjct: 412 WDPDSVKTISAKTHNSALEYNIFEGMECRGSPLVVISQGKIV 453 >gi|3914504|sp|O08357|PYRC_SULSO DIHYDROOROTASE (DHOASE) >gi|2065441|emb|CAA73353| (Y12823) dihydroorotase [Sulfolobus acidocaldarius] Length = 355 Score = 72.2 bits (174), Expect = 7e-12 Identities = 93/392 (23%), Positives = 156/392 (39%), Gaps = 70/392 (17%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLE 121 ILP VD HVH+ + E T T A+ GGV +VDMP N +P E + +L Sbjct: 9 ILPASVDLHVHVRGAQLSYKETVATATSEAVYGGVGVIVDMP-NTVPYINTPERIKERLR 67 Query: 122 AAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALK 181 + D G + G+ ++ + K + G+K + +E+ EE Sbjct: 68 EFQLYSRTDYGIYSGV----SKEVEEIDKLPIAGYK--IYPEDLEK---------EETRY 112 Query: 182 VLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNG 241 VL + + + H E+P + ++ +S+ E AINL+ Sbjct: 113 VLEKSKKLKILHPEMPFVSKIERSLRRSY------------WMETAAINLV--------- 151 Query: 242 PVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRS 301 +HI H+ + + + L A + TT+ H+L + E+ K PPIR Sbjct: 152 -KGNMHITHITNFETLQL-----AKSMGFTTDITAHHLVVDGER----DCISKVNPPIRD 201 Query: 302 ESNR-----QGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLP-- 354 R +GL++ + + SDH+P + E K + +F GIA V P Sbjct: 202 YVTRLKLFLKGLFE------VDCIASDHAPHSKEEKRM---NFDLCPPGIAGVSFSTPYI 252 Query: 355 --LMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVY 412 LMF S+ V+ N S + + G I GY A+ F + ++ + Sbjct: 253 YSLMFKGLISIDRAVSLLSGNPSRILNI--PTGKIKEGYRAN---FTVIKRENWRYTTKF 307 Query: 413 FKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 K T +G ++ V I+ G++ + N Sbjct: 308 SKVTETPMDGFSLDAKVTNVIVEGKLAFDGEN 339 >gi|3122044|sp|O35098|DPY4_MOUSE DIHYDROPYRIMIDINASE RELATED PROTEIN-4 (DRP-4) (ULIP4 PROTEIN) >gi|2342490|gnl|PID|d1022746 (AB006715) dihydropyrimidinase related protein 4 [Mus musculus] Length = 572 Score = 71.4 bits (172), Expect = 1e-11 Identities = 105/469 (22%), Positives = 185/469 (39%), Gaps = 46/469 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I I T++ Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFHADLYVEDGLIKQIGENLIVPGGIKTID-AHGL 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVD--MPLNAIPPTTNVENF 116 +LPG VD H L P G T + F GT+AA++GG T ++D P + E + Sbjct: 64 MVLPGGVDVHTRLQMPVMGMTPADDFCQGTKAALAGGTTMILDHVFPDAGVSLLAAYEQW 123 Query: 117 RIKLEAA---EGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 R + ++A + + D+ W L L+ +G FL+ ++ Sbjct: 124 RERADSAACCDYSLHVDIPRWHESTKEELEALVR-----DKGVNSFLVFMAYKDRCQCTD 178 Query: 174 EYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDAINL 231 I E ++ + + HAE E++Q+ EQ + S P+ E +A+ Sbjct: 179 GQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQGITGPEGHVLSHPEEVEAEAVYR 238 Query: 232 ILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAT 291 + + N P+ ++ + S A ++ +A+ G+ V E I A DG+ Sbjct: 239 AVTIAKQANCPL---YVTKVMSKGAADMVAQAKRRGVVVFGEP------ITASLGTDGSH 289 Query: 292 Y----------FKCCPPIRSE-SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFF 340 Y F PPI + + L L G + S H T K + K +F Sbjct: 290 YWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTFTTAQKAVGKDNFT 349 Query: 341 DSWGGIASVGLGLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYDADL 395 G+ + + +++ + + + V N + +KG +A G DADL Sbjct: 350 LIPEGVNGIEERMSVVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADL 409 Query: 396 VVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 V+++ + S S + + G+ +G I +G+VV + N Sbjct: 410 VIWNPRATKVFSAKSHNLNVEYNIFEGVECRGVPTVVISQGRVVLEDGN 458 >gi|401299|sp|Q01630|UN33_CAEEL UNC-33 PROTEIN >gi|539424|pir||S33558 unc-33 protein - Caenorhabditis elegans >gi|6900|emb|CAA78520| (Z14148) hypothetical polypeptide I [Caenorhabditis elegans] >gi|6904|emb|CAA78516| (Z14146) largest of three putative polypeptides encoded by unc-33 gene [Caenorhabditis elegans] Length = 854 Score = 71.0 bits (171), Expect = 2e-11 Identities = 98/401 (24%), Positives = 162/401 (39%), Gaps = 46/401 (11%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDM--PLNAIPPTTNVENFRIKL 120 LP +D + + + +S + TG ++AI+GG T+V++ P A + V+ R+K Sbjct: 384 LPAGIDVYTQVTD---SSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVK--RVKN 438 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEE-- 178 + + + C V + ++ LVK G F+LD GV E E Sbjct: 439 QLEKSGISCHVALSVAITDFCEQEMSELVKN--EGINSFVLD-GVSLTDDKLLELFEHVK 495 Query: 179 ---ALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILEC 235 AL + E+ ++ E PE F SRP+S E D ++ + C Sbjct: 496 RLGALIRVVPENKSIVAMLEKKMLKLGVTGPE-------GFPQSRPESLEADRVSGV--C 546 Query: 236 LRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK- 294 + N P+ IV ++S ++ I KARASG E +A DG+ F Sbjct: 547 VLG-NLASCPISIVQVSSADSLAAIEKARASGALAHAEIA------SAAVTADGSALFSQ 599 Query: 295 ----CCPPIRSESNRQGLWD----ALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGI 346 + R+G D AL + S H P + K DF + G Sbjct: 600 DLRFASAHLTDVPLRRGAPDRMIGALSTQPLVVCTSGHRPVNSATRVAAK-DFAIAQKGS 658 Query: 347 ASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401 + +++ + + V N + + +KG IA G DADLV++D + Sbjct: 659 TGAEERMAVVWERAVRSGRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDAS 718 Query: 402 SKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442 K + +S + + Y+G+TV V TI+ G++ Y N Sbjct: 719 GKRVLESSRAQSSQENSMYDGLTVHSVVTATIVGGKIAYQN 759 >gi|6901|emb|CAA78521| (Z14148) hypothetical polypeptide II [Caenorhabditis elegans] >gi|6905|emb|CAA78517| (Z14146) hypothetical [Caenorhabditis elegans] Length = 679 Score = 71.0 bits (171), Expect = 2e-11 Identities = 98/401 (24%), Positives = 162/401 (39%), Gaps = 46/401 (11%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDM--PLNAIPPTTNVENFRIKL 120 LP +D + + + +S + TG ++AI+GG T+V++ P A + V+ R+K Sbjct: 209 LPAGIDVYTQVTD---SSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVK--RVKN 263 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEE-- 178 + + + C V + ++ LVK G F+LD GV E E Sbjct: 264 QLEKSGISCHVALSVAITDFCEQEMSELVKN--EGINSFVLD-GVSLTDDKLLELFEHVK 320 Query: 179 ---ALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILEC 235 AL + E+ ++ E PE F SRP+S E D ++ + C Sbjct: 321 RLGALIRVVPENKSIVAMLEKKMLKLGVTGPE-------GFPQSRPESLEADRVSGV--C 371 Query: 236 LRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK- 294 + N P+ IV ++S ++ I KARASG E +A DG+ F Sbjct: 372 VLG-NLASCPISIVQVSSADSLAAIEKARASGALAHAEIA------SAAVTADGSALFSQ 424 Query: 295 ----CCPPIRSESNRQGLWD----ALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGI 346 + R+G D AL + S H P + K DF + G Sbjct: 425 DLRFASAHLTDVPLRRGAPDRMIGALSTQPLVVCTSGHRPVNSATRVAAK-DFAIAQKGS 483 Query: 347 ASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401 + +++ + + V N + + +KG IA G DADLV++D + Sbjct: 484 TGAEERMAVVWERAVRSGRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDAS 543 Query: 402 SKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442 K + +S + + Y+G+TV V TI+ G++ Y N Sbjct: 544 GKRVLESSRAQSSQENSMYDGLTVHSVVTATIVGGKIAYQN 584 >gi|6902|emb|CAA78522| (Z14148) hypothetical polypeptide III [Caenorhabditis elegans] >gi|6906|emb|CAA78518| (Z14146) hypothetical [Caenorhabditis elegans] Length = 523 Score = 71.0 bits (171), Expect = 2e-11 Identities = 98/401 (24%), Positives = 162/401 (39%), Gaps = 46/401 (11%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDM--PLNAIPPTTNVENFRIKL 120 LP +D + + + +S + TG ++AI+GG T+V++ P A + V+ R+K Sbjct: 53 LPAGIDVYTQVTD---SSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVK--RVKN 107 Query: 121 EAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEE-- 178 + + + C V + ++ LVK G F+LD GV E E Sbjct: 108 QLEKSGISCHVALSVAITDFCEQEMSELVKN--EGINSFVLD-GVSLTDDKLLELFEHVK 164 Query: 179 ---ALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILEC 235 AL + E+ ++ E PE F SRP+S E D ++ + C Sbjct: 165 RLGALIRVVPENKSIVAMLEKKMLKLGVTGPE-------GFPQSRPESLEADRVSGV--C 215 Query: 236 LRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK- 294 + N P+ IV ++S ++ I KARASG E +A DG+ F Sbjct: 216 VLG-NLASCPISIVQVSSADSLAAIEKARASGALAHAEIA------SAAVTADGSALFSQ 268 Query: 295 ----CCPPIRSESNRQGLWD----ALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGI 346 + R+G D AL + S H P + K DF + G Sbjct: 269 DLRFASAHLTDVPLRRGAPDRMIGALSTQPLVVCTSGHRPVNSATRVAAK-DFAIAQKGS 327 Query: 347 ASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401 + +++ + + V N + + +KG IA G DADLV++D + Sbjct: 328 TGAEERMAVVWERAVRSGRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDAS 387 Query: 402 SKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442 K + +S + + Y+G+TV V TI+ G++ Y N Sbjct: 388 GKRVLESSRAQSSQENSMYDGLTVHSVVTATIVGGKIAYQN 428 >gi|1945273|emb|CAA70299| (Y09079) Ulip4 protein [Mus musculus] Length = 572 Score = 67.9 bits (163), Expect = 1e-10 Identities = 105/469 (22%), Positives = 184/469 (38%), Gaps = 46/469 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + E I I T++ Sbjct: 9 IPRITSDRLLIKGGK----IVNDDQSFHADLYVEDGLIKQIGENLIVPGGIKTID-AHGL 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVD--MPLNAIPPTTNVENF 116 +LPG VD H L P G T + F GT+AA++GG T ++D P + E + Sbjct: 64 MVLPGGVDVHTRLQMPVMGMTPADDFCQGTKAALAGGTTMILDHVFPDAGVSLLAAYEQW 123 Query: 117 RIKLEAA---EGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGK 173 R ++A + + D+ W L L+ +G FL+ ++ Sbjct: 124 RDGADSAACCDYSLHVDIPRWHESTKEELEALVR-----DKGVNSFLVFMAYKDRCQCTD 178 Query: 174 EYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDAINL 231 I E ++ + + HAE E++Q+ EQ + S P+ E +A+ Sbjct: 179 GQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQGITGPEGHVLSHPEEVEAEAVYR 238 Query: 232 ILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAT 291 + + N P+ ++ + S A ++ +A+ G+ V E I A DG+ Sbjct: 239 AVTIAKQANCPL---YVTKVMSKGAADMVAQAKRRGVVVFGEP------ITASLGTDGSH 289 Query: 292 Y----------FKCCPPIRSE-SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFF 340 Y F PPI + + L L G + S H T K + K +F Sbjct: 290 YWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTFTTAQKAVGKDNFT 349 Query: 341 DSWGGIASVGLGLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYDADL 395 + + + +++ + + + V N + +KG +A G DADL Sbjct: 350 LIPEVVNGIEERMSVVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADL 409 Query: 396 VVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444 V+++ + IS S + + G+ +G I +G+VV + N Sbjct: 410 VIWNPRATKVISAKSHNLNVEYNIFEGVECRGVPTVVISQGRVVLEDGN 458 >gi|4337094|gb|AAD18071| (AF129814) carbamyl phosphate synthetase II; CPS.B domain [Drosophila melanogaster] Length = 752 Score = 67.1 bits (161), Expect = 2e-10 Identities = 64/208 (30%), Positives = 86/208 (40%), Gaps = 37/208 (17%) Query: 63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEA 122 LPG +D HVHL EPG T E F +GT AA++GGVT V MP N P + E F E Sbjct: 582 LPGFIDVHVHLREPGATHKEDFASGTAAALAGGVTLVCAMP-NTNPSIVDRETFTQFQEL 640 Query: 123 AEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKV 182 A+ CD + G N + L G+ K Y+ + Sbjct: 641 AKAGARCDYALYVGASDDNWAQVNELASHA----------CGL-------KMYLNDTFGT 683 Query: 183 LAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLRARNGP 242 L D M + L +H ++ P H E S A ++L L R+ Sbjct: 684 LKLSD-MTSWQRHL--SHWPKRSPIVCHAERQS-----------TAAVIMLAHLLDRS-- 727 Query: 243 VPPVHIVHLASMKAIPLIRKARASGLPV 270 VHI H+A + I LIR A+ G+ V Sbjct: 728 ---VHICHVARKEEIQLIRSAKEKGVKV 752 >gi|1946203|emb|CAA71872| (Y10976) cytosolic phosphoprotein [Homo sapiens] Length = 553 Score = 66.7 bits (160), Expect = 3e-10 Identities = 101/466 (21%), Positives = 179/466 (37%), Gaps = 52/466 (11%) Query: 3 INAITSDHVIINGA-----NKPATIVYSTESGTILDVLEGSVVMEKTEITKYEIHTLENV 57 I ITSD ++I G ++ E G I + E +V I + H L Sbjct: 9 IPRITSDRLLIRGGRIVNDDQSFYADVHVEDGLIKQIGENLIV--PGGIXTIDAHGL--- 63 Query: 58 SPCTILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVD--MPLNAIPPTTNV 113 +LPG VD H L P G T + F GT+AA++GG T ++D P + Sbjct: 64 ---MVLPGGVDVHTRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDTGVSLLAAY 120 Query: 114 ENFRIKLEAA---EGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPP 170 E +R + ++A + + D+ W + L L+ +G FL+ ++ Sbjct: 121 EQWRERADSAACCDYSLHVDITRWHESIKEELEALVK-----EKGVNSFLVFMAYKDRCQ 175 Query: 171 IGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDA 228 + E ++ + + HAE E++Q+ E + S P+ E +A Sbjct: 176 CSDSQMYEIFSIIRDLGALAQVHAENGDIVEEEQKRLLELGITGPEGHVLSHPEEVEAEA 235 Query: 229 INLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD 288 + + + N P+ ++ + S A I +A+ G+ V E I A D Sbjct: 236 VYRAVTIAKQANCPL---YVTKVMSKGAADAIAQAKRRGVVVFGEP------ITASLGTD 286 Query: 289 GATY----------FKCCPPIRSE-SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKG 337 G+ Y F PP+ + + L L G + S H T K + K Sbjct: 287 GSHYWSKNWAKAAAFVTSPPVNPDPTTADHLTCLLSSGDLQVTGSAHCTFTTAQKAVGKD 346 Query: 338 DFFDSWGGIASVGLGLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYD 392 +F G + + +++ + + + V N + +KG +A G D Sbjct: 347 NFALIPEGTNGIEERMSMVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSD 406 Query: 393 ADLVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQV 438 ADLV+++ + IS + + + G+ +G I +G+V Sbjct: 407 ADLVIWNPKATKIISAKTHNLNVEYNIFEGVECRGAPAVVISQGRV 452 >gi|3122042|sp|O14531|DPY4_HUMAN DIHYDROPYRIMIDINASE RELATED PROTEIN-4 (DRP-4) (ULIP4 PROTEIN) >gi|2342486|gnl|PID|d1022744 (AB006713) dihydropyrimidinase related protein 4 [Homo sapiens] Length = 572 Score = 66.3 bits (159), Expect = 4e-10 Identities = 100/464 (21%), Positives = 182/464 (38%), Gaps = 48/464 (10%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDV-LEGSVVMEKTE--ITKYEIHTLENVSP 59 I ITSD ++I G + + + DV +E ++ + E I I T++ Sbjct: 9 IPRITSDRLLIRGGR-----IVNDDQSFYADVHVEDGLIKQIGENLIVPGGIKTID-AHG 62 Query: 60 CTILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVD--MPLNAIPPTTNVEN 115 +LPG VD H L P G T + F GT+AA++GG T ++D P + E Sbjct: 63 LMVLPGGVDVHTRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDTGVSLLAAYER 122 Query: 116 FRIKLEAA---EGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 +R + ++A + + D+ W + L L+ +G FL+ ++ Sbjct: 123 WRERADSAACCDYSLHVDITRWHESIKEELEALVK-----EKGVNSFLVFMAYKDRCQCS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQP--EQSHREYSSFLSSRPDSFEIDAIN 230 + E ++ + + HAE E++Q+ E + S P+ E +A+ Sbjct: 178 DSQMYEIFSIIRDLGALAQVHAENGDIVEEEQKRLLELGITGPEGHVLSHPEEVEAEAVY 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGA 290 + + N P+ ++ + S A I +A+ G+ V E I A DG+ Sbjct: 238 RAVTIAKQANCPL---YVTKVMSKGAADAIAQAKRRGVVVFGEP------ITASLGTDGS 288 Query: 291 TY----------FKCCPPIRSE-SNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDF 339 Y F PP+ + + L L G + S H T K + K +F Sbjct: 289 HYWSKNWAKAAAFVTSPPVNPDPTTADHLTCLLSSGDLQVTGSAHCTFTTAQKAVGKDNF 348 Query: 340 FDSWGGIASVGLGLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYDAD 394 G + + +++ + + + V N + +KG +A G DAD Sbjct: 349 ALIPEGTNGIEERMSMVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDAD 408 Query: 395 LVVFDTASKHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQV 438 LV+++ + IS + + + G+ +G I +G+V Sbjct: 409 LVIWNPKATKIISAKTHNLNVEYNIFEGVECRGAPAVVISQGRV 452 >gi|8509|emb|CAA28502| (X04813) CAD protein (AA 1 - 2236) [Drosophila melanogaster] Length = 2236 Score = 64.0 bits (153), Expect = 2e-09 Identities = 92/388 (23%), Positives = 147/388 (37%), Gaps = 68/388 (17%) Query: 63 LPGLVDSHVHLN-----EPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFR 117 LPG +D HVHL + G W +G + +T V MP N P + E F Sbjct: 1482 LPGFIDVHVHLRSRSHAQGGLCQWNSSRSGWR------LTLVCAMP-NTNPSIVDRETFT 1534 Query: 118 IKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIE 177 E A+ CD + G N + L G+ K Y+ Sbjct: 1535 QFQELAKAGARCDYALYVGASDDNWAQVNELASHAC----------GL-------KMYLN 1577 Query: 178 EALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLR 237 + L D M + L +H ++ P H E S A ++L L Sbjct: 1578 DTFGTLKLSD-MTSWQRHL--SHWPKRSPIVCHAERQS-----------TAAVIMLAHLL 1623 Query: 238 ARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCC 296 R+ VHI H+A + I LIR A+ G+ V C H+L ++ + + G + Sbjct: 1624 DRS-----VHICHVARKEEIQLIRSAKEKGVKVNLRVCPHHLFLSTKDVDGLGHGMSEVR 1678 Query: 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLM 356 P + S +++ LW+ + I +DH+P T K ++ G V LPL+ Sbjct: 1679 PLLCSPEDQEALWENI--DYIDVFATDHAPHTLAEKRSERPP-----PGFPGVETILPLL 1731 Query: 357 FTQ----GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVY 412 ++ DI +N L Q T V D + I+ + + Sbjct: 1732 LQAVHEGRLTMEDIKRKFHRNPKIIFNLPDQAQT--------YVEVDLDEEWTITGNEMK 1783 Query: 413 FKNKLTAYNGMTVKGTVLKTILRGQVVY 440 K+ T + G VKG V +++LRG++ + Sbjct: 1784 SKSGWTPFEGTKVKGLVYRSVLRGELAF 1811 >gi|3915831|sp|P05990|PYR1_DROME CAD PROTEIN (RUDIMENTARY PROTEIN) [CONTAINS: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE ; ASPARTATE CARBAMOYLTRANSFERASE ; DIHYDROOROTASE ] >gi|2144531|pir||QZFF rudimentary protein - fruit fly (Drosophila melanogaster) Length = 2236 Score = 64.0 bits (153), Expect = 2e-09 Identities = 92/388 (23%), Positives = 147/388 (37%), Gaps = 68/388 (17%) Query: 63 LPGLVDSHVHLN-----EPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFR 117 LPG +D HVHL + G W +G + +T V MP N P + E F Sbjct: 1482 LPGFIDVHVHLRSRSHAQGGLCQWNSSRSGWR------LTLVCAMP-NTNPSIVDRETFT 1534 Query: 118 IKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIE 177 E A+ CD + G N + L G+ K Y+ Sbjct: 1535 QFQELAKAGARCDYALYVGASDDNWAQVNELASHAC----------GL-------KMYLN 1577 Query: 178 EALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLR 237 + L D M + L +H ++ P H E S A ++L L Sbjct: 1578 DTFGTLKLSD-MTSWQRHL--SHWPKRSPIVCHAERQS-----------TAAVIMLAHLL 1623 Query: 238 ARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD-GATYFKCC 296 R+ VHI H+A + I LIR A+ G+ V C H+L ++ + + G + Sbjct: 1624 DRS-----VHICHVARKEEIQLIRSAKEKGVKVNLRVCPHHLFLSTKDVDGLGHGMSEVR 1678 Query: 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLM 356 P + S +++ LW+ + I +DH+P T K ++ G V LPL+ Sbjct: 1679 PLLCSPEDQEALWENI--DYIDVFATDHAPHTLAEKRSERPP-----PGFPGVETILPLL 1731 Query: 357 FTQ----GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKISNSSVY 412 ++ DI +N L Q T V D + I+ + + Sbjct: 1732 LQAVHEGRLTMEDIKRKFHRNPKIIFNLPDQAQT--------YVEVDLDEEWTITGNEMK 1783 Query: 413 FKNKLTAYNGMTVKGTVLKTILRGQVVY 440 K+ T + G VKG V +++LRG++ + Sbjct: 1784 SKSGWTPFEGTKVKGLVYRSVLRGELAF 1811 >gi|3122038|sp|Q62952|DPY3_RAT DIHYDROPYRIMIDINASE RELATED PROTEIN-3 (DRP-3) (COLLAPSIN RESPONSE MEDIATOR PROTEIN 4) (CRMP-4) >gi|1399542 (U52104) rCRMP-4 [Rattus norvegicus] Length = 358 Score = 63.2 bits (151), Expect = 3e-09 Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 26/277 (9%) Query: 3 INAITSDHVIINGANKPATIVYSTESGTILDVLEGSVVMEKTE--ITKYEIHTLENVSPC 60 I ITSD ++I G IV +S +E ++ + + I + T+E + Sbjct: 9 IPRITSDRLLIKGGR----IVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIE-ANGK 63 Query: 61 TILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRI 118 ++PG +D H H P G T+ + F GT+AA++GG T ++D + P ++ E + Sbjct: 64 MVMPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPE-PESSLTEAYEK 122 Query: 119 KLEAAEGQMWC------DVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIG 172 E A+G+ C D+ W V + +L + +G F++ ++ + Sbjct: 123 WREWADGKSCCDYALHVDITHWNDSVKQEVQNL-----SKEKGVNSFMVYMAYKDLYQVS 177 Query: 173 KEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSSRPDSFEIDAIN 230 + E L E + HAE A E + E + SRP+ E +A+ Sbjct: 178 NTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVF 237 Query: 231 LILECLRARNGPVPPVHIVHLASMKAIPLIRKARASG 267 + N P+++ + S A LI +AR G Sbjct: 238 RAITVASQTN---CPLYVTKVMSKSAADLISQARKKG 271 >gi|3914507|sp|O28034|PYRC_ARCFU DIHYDROOROTASE (DHOASE) >gi|2648275 (AE000949) dihydroorotase (pyrC) [Archaeoglobus fulgidus] Length = 403 Score = 58.6 bits (139), Expect = 9e-08 Identities = 92/396 (23%), Positives = 151/396 (37%), Gaps = 59/396 (14%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLE 121 ILP +D HVHL + E ETGT +A+ GG+ VVD P N PP + E + ++ Sbjct: 40 ILPAGIDVHVHLRDFAEKRKETIETGTLSALHGGICLVVDQP-NTKPPVDDAETYFRRMG 98 Query: 122 AAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEF--PPIGKEYIE-- 177 AE ++ D L N G G ++ E + P +G+ +I+ Sbjct: 99 KAEKSVYVDYALNLALTNSN------------HGKIGSIMRKISERYFVPAVGEVFIQHD 146 Query: 178 -EALKVLAE---------EDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEID 227 E L++ E E + HAE P R +F+ R ++ E+ Sbjct: 147 SEDLQIDYETLSSVYKRFEGVVFTIHAE---------DPAYVARGSPNFVFRRREA-EVL 196 Query: 228 AINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP 287 A+ ++E + H H+++ + I + + T E H++ ++ E Sbjct: 197 AVERLVE--------LGKFHFCHISTKDSAKEILNSNS-----TYEVTPHHMLLSVEDYG 243 Query: 288 DGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIA 347 PP+R + + L+ I + SDH+P T E K F G+ Sbjct: 244 RLGNLVNVNPPLREREDVEWLFRNFHR--IDVLASDHAPHTLEDKEAGASGF----PGVE 297 Query: 348 SV-GLGLPLMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASKHKI 406 ++ L + L S +V N + G G I G A+ VFD +I Sbjct: 298 TMYPLFVNLASKGYISFKTLVEKIASNPARIFGFKGY-GEIEVGNYANFAVFDLKKVDEI 356 Query: 407 SNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442 ++ K T + G K LRG+ + N Sbjct: 357 RAERLHSKCGWTPFEGFEAVFPD-KVYLRGKELLEN 391 >gi|1652025|gnl|PID|d1017684 (D90901) dihydroorotase [Synechocystis sp.] Length = 441 Score = 50.8 bits (119), Expect = 2e-05 Identities = 82/349 (23%), Positives = 132/349 (37%), Gaps = 68/349 (19%) Query: 62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENF---RI 118 + P L D + + EPG E + AI+GG V +P N PP + + Sbjct: 55 LAPSLADLYSYSGEPGYEDRETLSQLVKTAIAGGFGDVAILP-NTDPPLDQPQTLQWLKQ 113 Query: 119 KLEAAEG--------------------QMWCDVGFWGGLVPHN----LPDLIPLVKAGVR 154 +L EG + C +WG + N L + L +AGV Sbjct: 114 RLNQIEGVNAHHQPPGDPQAENRPDSAPVQCH--WWGSVTQGNQGKQLTEWGELDQAGVI 171 Query: 155 GFKGF-------LLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPE 207 GF LL +E GK L + + +M E P A + P+ Sbjct: 172 GFSDGGAIQDWRLLQRALEYGAIAGKPLALVPLNLSLRGNGVMR---EGPLAIQLGLPPD 228 Query: 208 QSHREYSSFLSSRPDSFEIDAINLILECLRARNGPVPPVHIVHLASMKAIPLIRKARASG 267 P E I +LE L PVH + +++ + + LI +A++ G Sbjct: 229 -------------PVMSEAAVIASLLELLPHYG---TPVHFMRISTARGVELIVQAKSQG 272 Query: 268 LPVTTETCFHYLCIAAEQIPDGA--------TYFKCCPPIRSESNRQGLWDALREGVIGS 319 L T +H+L ++ E I G + PP+ +E +R L + ++ GVI + Sbjct: 273 LNCTASVNWHHLLLSNEAIAHGLPPHTPHYDPNLRFDPPLGNEGDRLALIEGVKSGVIDA 332 Query: 320 VVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGCSLVDIVT 368 + DH T E K F ++ G L LP ++ QG +++T Sbjct: 333 IAVDHQAFTYEEKT---QTFAETPPGAIGYELVLPCLW-QGLVEKNLIT 377 Database: nr Posted date: Mar 13, 1999 7:20 PM Number of letters in database: 110,384,460 Number of sequences in database: 361,503 Lambda K H 0.318 0.136 0.411 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105290737 Number of Sequences: 361503 Number of extensions: 4600388 Number of successful extensions: 11883 Number of sequences better than 1.0e-03: 72 Number of HSP's better than 0.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 11694 Number of HSP's gapped (non-prelim): 103 length of query: 460 length of database: 110384460 effective HSP length: 54 effective length of query: 406 effective length of database: 90863298 effective search space: 36890498988 effective search space used: 36890498988 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 105 (45.3 bits)