| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 146359 | hypothetical | BPSL1583 | putative exported protein No significant database matches | genbank | 52209631 | CAH35584.1 | 171 | 1839642 | 1840157 | |
| 146360 | pseudogene | pseudogene | BPSL1584 | putative peptide synthetase (fragment) Similar to internal regions of Streptomyces verticillus peptide synthetase NRPS12 SWALL:Q9FB39 (EMBL:AF210249) (578 aa) fasta scores: E(): 7.3e-19, 41.29% id in 201 aa, and Streptomyces lavendulae peptide synthetase SWALL:Q93N89 (EMBL:AF386507) (2116 aa) fasta scores: E(): 3.3e-18, 45.4% id in 174 aa | genbank | 32 | 1840864 | 1840959 | ||
| 146361 | pseudogene | pseudogene | BPSL1586 | putative nonribosomal peptide synthase (fragment) Similar to the C-terminal region of Pseudomonas aeruginosa probable nonribosomal peptide synthetase pa4078 SWALL:Q9HWV0 (EMBL:AE004823) (991 aa) fasta scores: E(): 3.6e-61, 60.9% id in 266 aa, and Myxococcus xanthus saframycin MX1 synthetase A SafA SWALL:Q50858 (EMBL:U24657) (2605 aa) fasta scores: E(): 5e-16, 32.35% id in 272 aa | genbank | 21 | 1841702 | 1841764 | ||
| 146362 | hypothetical | BPSL1588 | putative AsnC-family transcriptional regulator Similar to Pseudomonas putida putative transcriptional regulator SWALL:Q93FY6 (EMBL:AF302763) (153 aa) fasta scores: E(): 9.5e-33, 64% id in 150 aa, and to Rhizobium loti transcriptional regulator mll4468 SWALL:Q98E02 (EMBL:AP003004) (142 aa) fasta scores: E(): 9.4e-19, 46.8% id in 141 aa | genbank | 52209632 | CAH35587.1 | 153 | 1842086 | 1842547 | |
| 146363 | hypothetical | BPSL1589 | putative membrane protein No significant database matches | genbank | 52209633 | CAH35588.1 | 360 | 1842602 | 1843684 | |
| 146364 | hypothetical | BPSL1590 | putative membrane protein No significant database matches | genbank | 52209634 | CAH35589.1 | 160 | 1843714 | 1844196 | |
| 146365 | hypothetical | BPSL1591 | conserved hypothetical protein Similar to Agrobacterium tumefaciens dehydrogenase atu0946 or agr_c_1727 SWALL:Q8UGT9 (EMBL:AE009059) (366 aa) fasta scores: E(): 1.7e-70, 54.77% id in 356 aa, and to Rhizobium meliloti hypothetical protein r03032 or smc02503 SWALL:Q92LL0 (EMBL:AL591792) (367 aa) fasta scores: E(): 2.7e-68, 52.52% id in 356 aa | genbank | 52209635 | CAH35590.1 | 366 | 1844497 | 1845597 | |
| 146366 | hypothetical | BPSL1592 | putative ATP-ase Similar to Clostridium acetobutylicum predicted P-loop ATPase cac1583 SWALL:Q97IQ7 (EMBL:AE007668) (187 aa) fasta scores: E(): 3.2e-09, 32.44% id in 188 aa | genbank | 52209636 | CAH35591.1 | 206 | 1845797 | 1846417 | |
| 146367 | pseudogene | pseudogene | BPSL1592A | conserved hypothetical protein (pseudogene) Putative pseudogene. Similar to Vibrio cholerae hypothetical protein vc1842 SWALL:Q9KR05 (EMBL:AE004260) (35 aa) fasta scores: E(): 7.6e-06, 61.29% id in 31 aa, and to Brucella melitensis protein bmeii0758 SWALL:Q8YBX8 (EMBL:AE009710) (51 aa) fasta scores: E(): 4.8e-05, 51.35% id in 37 aa | genbank | 13 | 1846457 | 1846498 | ||
| 146368 | hypothetical | BPSL1593 | putative metal ion transport protein Similar to Ralstonia solanacearum probable magnesium and cobalt transport transmembrane protein rsp0665 or rs01784 SWALL:Q8XS16 (EMBL:AL646080) (323 aa) fasta scores: E(): 4.6e-51, 44.61% id in 325 aa, and to Xanthomonas campestris magnesium and cobalt transport protein CorA or xcc2335 SWALL:AAM41613 (EMBL:AE012341) (332 aa) fasta scores: E(): 2.5e-44, 40.79% id in 326 aa | genbank | 52209637 | CAH35593.1 | 336 | 1846747 | 1847757 | |
| 146369 | hypothetical | BPSL1594 | hypothetical protein No significant database matches | genbank | 52209638 | CAH35594.1 | 117 | 1847765 | 1848118 | |
| 146370 | hypothetical | BPSL1595 | putative lipoprotein No significant database matches | genbank | 52209639 | CAH35595.1 | 146 | 1848607 | 1849047 | |
| 146371 | hypothetical | BPSL1596 | putative exported protein No significant database matches | genbank | 52209640 | CAH35596.1 | 87 | 1849709 | 1849972 | |
| 146372 | hypothetical | BPSL1597 | putative membrane protein No significant database matches | genbank | 52209641 | CAH35597.1 | 123 | 1850065 | 1850436 | |
| 146373 | hypothetical | BPSL1598 | putative transport-related, membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa1408 SWALL:Q9I3T6 (EMBL:AE004570) (807 aa) fasta scores: E(): 1.7e-101, 44.54% id in 806 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00938 or smc00028 SWALL:Q92RE2 (EMBL:AL591785) (871 aa) fasta scores: E(): 8.9e-50, 30.95% id in 814 aa, and to parts of Escherichia coli potassium efflux system KefA or AefA or b0465 SWALL:KEFA_ECOLI (SWALL:P77338) (1120 aa) fasta scores: E(): 8.4e-19, 26.16% id in 711 aa | genbank | 52209642 | CAH35598.1 | 809 | 1850780 | 1853209 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146374 | hypothetical | BPSL1599 | putative membrane linked regulatory protein Similar to Pseudomonas aeruginosa regulatory protein pa3391 SWALL:NSR1_PSEAE (SWALL:Q9HYL3) (715 aa) fasta scores: E(): 7.3e-71, 39.01% id in 692 aa, and to Pseudomonas stutzeri regulatory protein NosR SWALL:NOSR_PSEST (SWALL:Q00790) (724 aa) fasta scores: E(): 1e-67, 38.32% id in 694 aa | genbank | 52209643 | CAH35599.1 | 713 | 1853587 | 1855728 | |
| 146375 | hypothetical | BPSL1600 | putative cytochrome c-related lipoprotein Similar to Xanthomonas axonopodis cytochrome c5 xac0273 SWALL:AAM35165 (EMBL:AE011652) (172 aa) fasta scores: E(): 2.8e-10, 42.85% id in 147 aa, and C-terminal region highly similar to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 3.2e-07, 43.75% id in 80 aa | genbank | 52209644 | CAH35600.1 | 164 | 1855778 | 1856272 | |
| 146376 | hypothetical | BPSL1601 | hypothetical protein Very low similarity to Streptomyces coelicolor hypothetical protein sco1549 or scl11.05C SWALL:Q9L1D3 (EMBL:AL157953) (312 aa) fasta scores: E(): 6.6, 31.09% id in 119 aa | genbank | 52209645 | CAH35601.1 | 134 | 1856294 | 1856698 | |
| 146377 | hypothetical | BPSL1602 | hypothetical protein Very low similarity to Streptomyces coelicolor hypothetical protein sco6897 or sc1b2.03 SWALL:Q9KYD3 (EMBL:AL356812) (103 aa) fasta scores: E(): 4.7, 36.48% id in 74 aa | genbank | 52209646 | CAH35602.1 | 89 | 1856701 | 1856970 | |
| 146378 | hypothetical | BPSL1603 | putative lipoprotein Similar to Ralstonia solanacearum probable NosL lipoprotein rsp1373 or rs02085 SWALL:Q8XQB3 (EMBL:AL646084) (176 aa) fasta scores: E(): 3.7e-29, 48.58% id in 177 aa, and to Pseudomonas stutzeri NosL protein precursor SWALL:Q52529 (EMBL:Z69589) (190 aa) fasta scores: E(): 2.6e-13, 36.47% id in 170 aa | genbank | 52209647 | CAH35603.1 | 176 | 1856981 | 1857511 | |
| 146379 | hypothetical | BPSL1604 | putative membrane protein Similar to Ralstonia solanacearum probable NosY transmembrane protein or rsp1372 or rs02086 SWALL:Q8XQB4 (EMBL:AL646084) (274 aa) fasta scores: E(): 9e-58, 62.26% id in 265 aa, and to Pseudomonas stutzeri membrane protein NosY precursor SWALL:NOSY_PSEST (SWALL:P19845) (276 aa) fasta scores: E(): 5.1e-37, 46.88% id in 273 aa | genbank | 52209648 | CAH35604.1 | 278 | 1857508 | 1858344 | |
| 146380 | hypothetical | BPSL1605 | putative copper-related ABC transport system, ATP-binding protein Similar to Ralstonia solanacearum probable copper ATP-binding ABC transporter protein rsp1371 or rs02087 SWALL:Q8XQB5 (EMBL:AL646084) (314 aa) fasta scores: E(): 4.5e-50, 55.77% id in 303 aa, and to Pseudomonas stutzeri copper transport ATP-binding protein NosF SWALL:NOSF_PSEST (SWALL:P19844) (308 aa) fasta scores: E(): 9.8e-35, 43.47% id in 299 aa | genbank | 52209649 | CAH35605.1 | 304 | 1858341 | 1859255 | |
| 146381 | hypothetical | BPSL1606 | putative copper-binding periplasmic protein Similar to Ralstonia solanacearum probable copper-binding periplasmic signal peptide protein rsp1370 or rs02088 SWALL:Q8XQB6 (EMBL:AL646084) (423 aa) fasta scores: E(): 2.5e-73, 59.36% id in 406 aa, and to Pseudomonas stutzeri copper-binding periplasmic protein precursor NosD SWALL:NOSD_PSEST (SWALL:P19843) (436 aa) fasta scores: E(): 6.3e-24, 38.71% id in 372 aa | genbank | 52209650 | CAH35606.1 | 416 | 1859252 | 1860502 | |
| 146382 | nosZ | hypothetical | BPSL1607 | nitrous-oxide reductase precursor Similar to Alcaligenes eutrophus nitrous-oxide reductase precursor NosZ SWALL:NOSZ_ALCEU (SWALL:Q59105) (643 aa) fasta scores: E(): 2e-157, 64.93% id in 653 aa, and to Pseudomonas stutzeri nitrous-oxide reductase precursor NosZ SWALL:NOSZ_PSEST (SWALL:P19573) (638 aa) fasta scores: E(): 9.4e-76, 49.84% id in 630 aa | genbank | 52209651 | CAH35607.1 | 655 | 1860683 | 1862650 |
| 146383 | hypothetical | BPSL1608 | putative thiamine biosynthesis lipoprotein Similar to Ralstonia solanacearum probable thiamine biosynthesis ApbE transmembrane protein rsp1366 or rs02092 SWALL:Q8XQC0 (EMBL:AL646084) (340 aa) fasta scores: E(): 5.6e-20, 33.13% id in 335 aa, and to Salmonella typhimurium thiamine biosynthesis lipoprotein ApbE precursor or stm2266 SWALL:APBE_SALTY (SWALL:P41780) (350 aa) fasta scores: E(): 7.7e-16, 27.21% id in 316 aa | genbank | 52209652 | CAH35608.1 | 352 | 1863332 | 1864390 | |
| 146384 | hypothetical | BPSL1609 | putative ABC transport system, ATP-binding protein Similar to Methanosarcina acetivorans multidrug ABC transporter, ATP-binding protein ma2689 SWALL:Q8TMH0 (EMBL:AE010965) (323 aa) fasta scores: E(): 7.2e-24, 32% id in 325 aa, and to Rhizobium meliloti putative ABC transporter ATP-binding protein rb0184 or smb20184 SWALL:Q92WX8 (EMBL:AL603642) (242 aa) fasta scores: E(): 6.6e-23, 41.78% id in 213 aa. Note: this CDS is longer in its N-terminal region than most of its database matches | genbank | 52209653 | CAH35609.1 | 334 | 1864412 | 1865416 | |
| 146385 | hypothetical | BPSL1610 | putative ABC transport system, membrane protein Similar to Methanosarcina acetivorans multidrug ABC transporter, permease protein ma2109 SWALL:Q8TP17 (EMBL:AE010897) (250 aa) fasta scores: E(): 1.5e-22, 34.67% id in 248 aa, and to Pyrococcus furiosus daunorubicin resistance membrane protein pf0582 SWALL:Q8U388 (EMBL:AE010180) (254 aa) fasta scores: E(): 2.8e-18, 32.08% id in 240 aa | genbank | 52209654 | CAH35610.1 | 246 | 1865413 | 1866153 | |
| 146386 | hypothetical | BPSL1611 | putative methyl-accepting chemotaxis transmembrane protein Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 8.7e-45, 38.66% id in 538 aa, and to Ralstonia solanacearum putative methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 1.6e-46, 44.98% id in 429 aa | genbank | 52209655 | CAH35611.1 | 529 | 1866328 | 1867917 | |
| 146387 | hypothetical | BPSL1612 | hypothetical protein No significant database matches | genbank | 52209656 | CAH35612.1 | 161 | 1868038 | 1868523 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146388 | hypothetical | BPSL1613 | putative glycerol utilisation-related protein Similar to Agrobacterium tumefaciens 3,4-dihydroxy-2-butanone kinase atu3543 or agr_l_2580 SWALL:Q8UA32 (EMBL:AE009283) (564 aa) fasta scores: E(): 5.5e-112, 60.17% id in 570 aa, and to Lycopersicon esculentum putative 3,4-dihydroxy-2-butanone kinase DhbK SWALL:DHBK_LYCES (SWALL:O04059) (594 aa) fasta scores: E(): 4.6e-59, 43.42% id in 578 aa | genbank | 52209657 | CAH35613.1 | 570 | 1868738 | 1870450 | |
| 146389 | hypothetical | BPSL1614 | hypothetical protein No significant database matches to the full length CDS. C-terminus is is weakly similar to C-terminal region of Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSES9 (SWALL:P12609) (329 aa) fasta scores: E(): 2.9e-05, 26.1% id in 272 aa | genbank | 52209658 | CAH35614.1 | 346 | 1870831 | 1871871 | |
| 146390 | hypothetical | BPSL1615 | putative iron-sulphur protein No significant database matches to the full length CDS. N-terminus is weakly similar to the N-terminal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 2e-06, 29.46% id in 207 aa | genbank | 52209659 | CAH35615.1 | 321 | 1871907 | 1872869 | |
| 146391 | hypothetical | BPSL1616 | putative transport related membrane protein Similar to Streptomyces viridochromogenes putative transporter AviJ SWALL:Q93KW8 (EMBL:AF333038) (476 aa) fasta scores: E(): 3.6e-37, 35.1% id in 433 aa, and to Actinosynnema pretiosum Na+/H+ antiporter Asm5 SWALL:AAM54083 (EMBL:AF453501) (416 aa) fasta scores: E(): 5.2e-31, 35.55% id in 405 aa | genbank | 52209660 | CAH35616.1 | 459 | 1872876 | 1874255 | |
| 146392 | hypothetical | BPSL1617 | putative hydroxylase Similar to Amycolatopsis orientalis hypothetical hydroxylase A SWALL:P96563 (EMBL:U84350) (491 aa) fasta scores: E(): 1.1e-44, 35.74% id in 414 aa, and to Amycolatopsis mediterranei halogenase BhaA SWALL:O87676 (EMBL:Y16952) (491 aa) fasta scores: E(): 1.5e-43, 34.78% id in 414 aa | genbank | 52209661 | CAH35617.1 | 480 | 1874296 | 1875738 | |
| 146393 | hypothetical | BPSL1618 | hypothetical protein No significant database matches | genbank | 52209662 | CAH35618.1 | 232 | 1875876 | 1876574 | |
| 146394 | pseudogene | pseudogene | BPSL1619 | putative alcohol dehydrogenase (pseudogene) Similar to Bacillus methanolicus NAD-dependent methanol dehydrogenase Mdh SWALL:MEDH_BACMT (SWALL:P31005) (380 aa) fasta scores: E(): 1.3e-79, 56.46% id in 379 aa, and to Klebsiella pneumoniae 1,3-propanediol dehydrogenase DhaT SWALL:DHAT_KLEPN (SWALL:Q59477) (387 aa) fasta scores: E(): 1.2e-74, 54.3% id in 383 aa. CDS contains a frameshift after codon 285 | genbank | 105 | 1878373 | 1878690 | ||
| 146395 | hypothetical | BPSL1621 | hypothetical protein No significant database matches | genbank | 52209663 | CAH35620.1 | 116 | 1878828 | 1879178 | |
| 146396 | hypothetical | BPSL1622 | putative exported protein No significant database matches | genbank | 52209664 | CAH35621.1 | 256 | 1879312 | 1880082 | |
| 146397 | hypothetical | BPSL1623 | subfamily S9C non-peptidase homologue Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 5.5e-17, 30.51% id in 331 aa, and to Alcaligenes faecalis poly(3-hydroxybutyrate) depolymerase precursor (EC 3.1.1.75) (PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 7.9e-08, 27.11% id in 295 aa | genbank | 52209665 | CAH35622.1 | 362 | 1880385 | 1881473 | |
| 146398 | hypothetical | BPSL1624 | hypothetical protein No significant database matches | genbank | 52209666 | CAH35623.1 | 63 | 1881764 | 1881955 | |
| 146399 | hypothetical | BPSL1625 | conserved hypothetical protein Similar to Xanthomonas axonopodis hypothetical protein xac1124 SWALL:AAM35997 (EMBL:AE011741) (146 aa) fasta scores: E(): 1.5e-24, 50% id in 146 aa, and to Synechocystis sp. hypothetical protein slr0325 SWALL:Q55530 (EMBL:D63999) (161 aa) fasta scores: E(): 5.2e-22, 45.07% id in 142 aa | genbank | 52209667 | CAH35624.1 | 155 | 1882057 | 1882524 | |
| 146400 | hypothetical | BPSL1626 | putative fimbrial subunit type 1 precursor Similar to Salmonella typhimurium type-1 fimbrial protein, A chain precursor FimA or stm0543 SWALL:FM1A_SALTY (SWALL:P37921) (185 aa) fasta scores: E(): 1.8e-12, 32.44% id in 188 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor Fim SWALL:FM12_KLEPN (SWALL:P12903) (182 aa) fasta scores: E(): 3e-12, 35.67% id in 185 aa | genbank | 52209668 | CAH35625.1 | 176 | 1883679 | 1884209 | |
| 146401 | hypothetical | BPSL1627 | putative fimbrial assembly chaperone precursor Similar to Pseudomonas aeruginosa probable pili assembly chaperone pa0993 SWALL:Q9I4X6 (EMBL:AE004532) (237 aa) fasta scores: E(): 5.8e-28, 42.14% id in 242 aa, and to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 1.2e-21, 33.19% id in 232 aa | genbank | 52209669 | CAH35626.1 | 256 | 1884308 | 1885078 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146402 | hypothetical | BPSL1628 | putative fimbrial usher protein Similar to Salmonella typhimurium putative fimbrial usher StiC or stm0175 SWALL:Q8ZRR6 (EMBL:AE008702) (848 aa) fasta scores: E(): 1.6e-89, 34.28% id in 872 aa, and to Escherichia coli outer membrane usher protein AfaC precursor SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 9.4e-79, 32% id in 881 aa | genbank | 52209670 | CAH35627.1 | 850 | 1885085 | 1887637 | |
| 146403 | hypothetical | BPSL1629 | putative exported fimbria-related protein Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 4.9e-09, 35.32% id in 167 aa, and to Xylella fastidiosa fimbrial adhesin precursor xf0077 SWALL:Q9PH69 (EMBL:AE003862) (356 aa) fasta scores: E(): 3.5e-10, 34.14% id in 246 aa. Note: This CDS has no similarities to any database matches in its N-terminal region | genbank | 52209671 | CAH35628.1 | 321 | 1887634 | 1888599 | |
| 146404 | hypothetical | BPSL1630 | hypothetical protein No significant database matches | genbank | 52209672 | CAH35629.1 | 83 | 1889376 | 1889627 | |
| 146405 | hypothetical | BPSL1631 | putative outer membrane protein Similar to the N-terminal region of Xanthomonas axonopodis outer membrane protein XadA or xac3546 SWALL:AAM38389 (EMBL:AE012003) (2190 aa) fasta scores: E(): 5.2e-56, 36.63% id in 1111 aa, and to full length of Xanthomonas oryzae pv. oryzae putative outer membrane protein XadA SWALL:Q9FDA0 (EMBL:AF288222) (1265 aa) fasta scores: E(): 1.8e-37, 29.89% id in 1278 aa. Note: Contains a repeat region between approx. residue 436 and residue 862, containing the repeat: NSTA(N/S)GTN(ST/AS)A(S/T)G(D/E). It is also similar to BPSS0088 (646 aa) fasta scores: E(): 2.9e-64, 56.604% identity in 636 aa overlap over the mentioned repeat region | genbank | 52209673 | CAH35630.1 | 1124 | 1889771 | 1893145 | |
| 146406 | hypothetical | BPSL1632 | putative membrane protein No significant database matches | genbank | 52209674 | CAH35631.1 | 161 | 1894492 | 1894977 | |
| 146407 | hypothetical | BPSL1633 | putative two-component system, response regulator Similar to Escherichia coli, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 6.4e-17, 32.21% id in 208 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa3714 SWALL:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 1.2e-19, 36.15% id in 213 aa | genbank | 52209675 | CAH35632.1 | 221 | 1895264 | 1895929 | |
| 146408 | hypothetical | BPSL1634 | putative two-component regulatory system, sensor kinase protein Similar to Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 7.1e-44, 27.18% id in 986 aa, and to Ralstonia solanacearum probable capsular synthesis regulatory rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 2.9e-52, 28.9% id in 993 aa.Note: This CDS appears to have a histidine kinase domain and a response regulator domain also | genbank | 52209676 | CAH35633.1 | 1082 | 1895929 | 1899177 | |
| 146409 | hypothetical | BPSL1635 | conserved hypothetical protein Similar to the C-terminal region of Xanthomonas axonopodis GGDEF family protein xac1938 SWALL:AAM36800 (EMBL:AE011829) (695 aa) fasta scores: E(): 1.3e-22, 33.57% id in 280 aa, and of Escherichia coli hypothetical protein YddU or b1489 SWALL:YDDU_ECOLI (SWALL:P76129) (799 aa) fasta scores: E(): 3.1e-21, 31.07% id in 251 aa | genbank | 52209677 | CAH35634.1 | 297 | 1899405 | 1900298 | |
| 146410 | hypothetical | BPSL1636 | putative regulatory protein Similar to Ralstonia solanacearum putative HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 5.8e-08, 37.63% id in 93 aa, and to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.025, 30.12% id in 83 aa | genbank | 52209678 | CAH35635.1 | 102 | 1901631 | 1901939 | |
| 146411 | hypothetical | BPSL1637 | putative lipase Only very low similarity to the central region of Arabidopsis thaliana lipase, putative t4k22.3 SWALL:Q9C8G6 (EMBL:AC025295) (529 aa) fasta scores: E(): 0.37, 31.77% id in 107 aa | genbank | 52209679 | CAH35636.1 | 356 | 1902196 | 1903266 | |
| 146412 | pseudogene | pseudogene | BPSL1638 | putative phage-related protein (fragment) Similarity to an internal region of Bacteriophage phiE125 protein GP31 SWALL:Q8W6S0 (EMBL:AF447491) (363 aa) fasta scores: E(): 2e-10, 45% id in 100 aa | genbank | 99 | 1903655 | 1903951 | ||
| 146413 | pseudogene | pseudogene | BPSL1639 | putative transposase (fragment) Similar to the N-terminal regions of Rhizobium meliloti transposase for insertion sequence element ISRm3 SWALL:TRA3_RHIME (SWALL:P80011) (400 aa) fasta scores: E(): 6e-29, 45.77% id in 225 aa, and Alcaligenes eutrophus insertion sequence IS1090 SWALL:Q9RBF5 (EMBL:AJ010060) (416 aa) fasta scores: E(): 9.2e-37, 51.23% id in 244 aa. CDS is truncated at the C-terminus and contains several nonsense mutations | genbank | 108 | 1903962 | 1904288 | ||
| 146414 | hypothetical | BPSL1642 | putative GntR-family regulatory protein Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 6.6e-30, 45.7% id in 221 aa, and to Rhizobium loti transcriptional regulator mll6786 SWALL:Q988D5 (EMBL:AP003010) (223 aa) fasta scores: E(): 2.3e-19, 37.15% id in 218 aa | genbank | 52209680 | CAH35639.1 | 256 | 1904965 | 1905735 | |
| 146415 | hypothetical | BPSL1643 | conserved hypothetical protein Similar to Rhizobium meliloti hypothetical protein ra0427 or sma0791 SWALL:Q92ZM8 (EMBL:AE007233) (200 aa) fasta scores: E(): 7.8e-54, 71.05% id in 190 aa, and to Agrobacterium tumefaciens hypothetical protein atu4237 or agr_l_1248 SWALL:Q8U862 (EMBL:AE009353) (200 aa) fasta scores: E(): 1.2e-53, 69.74% id in 195 aa | genbank | 52209681 | CAH35640.1 | 195 | 1906033 | 1906620 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146416 | hypothetical | BPSL1644 | putative hydrolase Similar to Agrobacterium tumefaciens hydrolase atu4238 or agr_l_1247 SWALL:Q8U861 (EMBL:AE009353) (286 aa) fasta scores: E(): 7.7e-32, 42.22% id in 270 aa, and to Bacillus subtilis putative esterase YtxM SWALL:YTXM_BACSU (SWALL:P23974) (274 aa) fasta scores: E(): 2.4e-12, 25.84% id in 267 aa | genbank | 52209682 | CAH35641.1 | 294 | 1906610 | 1907494 | |
| 146417 | hypothetical | BPSL1645 | putative oxygenase Similar to Agrobacterium tumefaciens nitrilotriacetate monooxygenase component B atu5229 or agr_pat_322 SWALL:Q8UK94 (EMBL:AE008945) (323 aa) fasta scores: E(): 2.9e-40, 41.66% id in 312 aa, and N-terminal region to Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SWALL:NTAB_CHEHE (SWALL:P54990) (322 aa) fasta scores: E(): 1.3e-25, 50.58% id in 172 aa | genbank | 52209683 | CAH35642.1 | 318 | 1907487 | 1908443 | |
| 146418 | hypothetical | BPSL1646 | putative monooxygenase Similar to Rhizobium meliloti hypothetical protein ra0430 or sma0794 SWALL:Q92ZM5 (EMBL:AE007233) (346 aa) fasta scores: E(): 1.2e-85, 58.67% id in 346 aa, and to Agrobacterium tumefaciens alkanal monooxygenase alpha chain atu4240 or agr_l_1243 SWALL:Q8U859 (EMBL:AE009353) (346 aa) fasta scores: E(): 6.8e-84, 58.38% id in 346 aa | genbank | 52209684 | CAH35643.1 | 347 | 1908552 | 1909595 | |
| 146419 | hypothetical | BPSL1647 | putative betaine aldehyde dehydrogenase Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 3.8e-66, 40.74% id in 481 aa, and to Agrobacterium tumefaciens aldehyde dehydrogenase DhaS or atu4241 or agr_l_1241 SWALL:Q8U858 (EMBL:AE009353) (493 aa) fasta scores: E(): 2.8e-137, 70.87% id in 491 aa | genbank | 52209685 | CAH35644.1 | 490 | 1909639 | 1911111 | |
| 146420 | hypothetical | BPSL1648 | conserved hypothetical protein Similar to Rhizobium meliloti hypothetical protein ra0432 or sma0797 SWALL:Q92ZM3 (EMBL:AE007233) (108 aa) fasta scores: E(): 1.7e-27, 69.6% id in 102 aa, and to Agrobacterium tumefaciens hypothetical protein atu4242 or agr_l_1239 SWALL:Q8U857 (EMBL:AE009353) (104 aa) fasta scores: E(): 2.9e-26, 67.96% id in 103 aa | genbank | 52209686 | CAH35645.1 | 104 | 1911181 | 1911495 | |
| 146421 | hypothetical | BPSL1649 | putative ABC transport system, substrate-binding protein Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 5.8e-12, 26.25% id in 320 aa, to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu4243 or agr_l_1237 SWALL:Q8U856 (EMBL:AE009353) (336 aa) fasta scores: E(): 6.2e-86, 63.09% id in 336 aa, and to Rhizobium meliloti putative ABC transporter, periplasmic solute-binding protein ra0433 or sma0799 SWALL:Q92ZM2 (EMBL:AE007234) (319 aa) fasta scores: E(): 2.4e-82, 64.57% id in 319 aa | genbank | 52209687 | CAH35646.1 | 343 | 1911565 | 1912596 | |
| 146422 | hypothetical | BPSL1650 | putative ABC transport system, permease protein Similar to Escherichia coli spermidine/putrescine transport system permease protein PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 8.4e-25, 35.57% id in 253 aa, and to Rhizobium meliloti putative ABC transporter, permease protein ra0434 or sma0800 SWALL:Q92ZM1 (EMBL:AE007234) (291 aa) fasta scores: E(): 1.5e-66, 66.07% id in 280 aa | genbank | 52209688 | CAH35647.1 | 294 | 1912675 | 1913559 | |
| 146423 | hypothetical | BPSL1651 | putative ABC transport system, permease protein Similar to Escherichia coli, and Escherichia coli O157:H7 spermidine/putrescine transport system permease protein PotC or b1124 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 5.5e-19, 29.13% id in 254 aa, and to Rhizobium meliloti putative ABC transporter, permease protein ra0435 or sma0802 SWALL:Q92ZM0 (EMBL:AE007234) (266 aa) fasta scores: E(): 1.5e-64, 66.41% id in 262 aa | genbank | 52209689 | CAH35648.1 | 264 | 1913561 | 1914355 | |
| 146424 | hypothetical | BPSL1652 | putative ABC transport system, ATP-binding protein Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 7.7e-42, 41.14% id in 350 aa, and to Rhizobium meliloti putative ABC-transporter ATP-binding protein ra0436 or sma0803 SWALL:Q92ZL9 (EMBL:AE007234) (359 aa) fasta scores: E(): 1.6e-71, 60.27% id in 360 aa | genbank | 52209690 | CAH35649.1 | 363 | 1914372 | 1915463 | |
| 146425 | hypothetical | BPSL1653 | putative GntR-family regulatory protein Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 1.1e-32, 47.59% id in 229 aa, and to Yersinia pestis putative GntR-family transcriptional regulatory protein ypo3651 SWALL:Q8ZAY1 (EMBL:AJ414158) (220 aa) fasta scores: E(): 3.7e-20, 37.08% id in 213 aa | genbank | 52209691 | CAH35650.1 | 254 | 1915444 | 1916208 | |
| 146426 | gabD | hypothetical | BPSL1654 | succinate-semialdehyde dehydrogenase [NADP+] Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 2e-126, 66.45% id in 480 aa, and to Pseudomonas aeruginosa succinate-semialdehyde dehydrogenase pa0265 SWALL:Q9I6M5 (EMBL:AE004464) (483 aa) fasta scores: E(): 1e-130, 69.03% id in 478 aa | genbank | 52209692 | CAH35651.1 | 486 | 1916230 | 1917690 |
| 146427 | hypothetical | BPSL1655 | putative outer membrane porin protein Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.4e-45, 42.89% id in 387 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.4e-17, 31.11% id in 376 aa. Note: Also similar to BPSL3036 (387 aa) fasta scores: E(): 1.4e-51, 45.503% identity in 378 aa overlap | genbank | 52209693 | CAH35652.1 | 372 | 1917834 | 1918952 | |
| 146428 | hypothetical | BPSL1656 | hypothetical protein No significant database matches | genbank | 52209694 | CAH35653.1 | 96 | 1919077 | 1919367 | |
| 146429 | hypothetical | BPSL1657 | insertion element hypothetical protein Similar to the C-terminal region of Xanthomonas campestris insertion element IS476 hypothetical protein SWALL:YI61_XANCV (SWALL:P25438) (346 aa) fasta scores: E(): 1.3e-63, 61.5% id in 265 aa, and to the full length Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 5.9e-98, 86.86% id in 274 aa | genbank | 52209695 | CAH35654.1 | 277 | 1919543 | 1920376 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146430 | hypothetical | BPSL1658 | insertion element hypothetical protein Identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa, and higly similar to to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa | genbank | 52209696 | CAH35655.1 | 87 | 1920400 | 1920663 | |
| 146431 | hypothetical | BPSL1658a | putative DNA-biding protein, H-NS-like Similar to Alcaligenes eutrophus HNS-like protein phg180 SWALL:Q7WXF4 (EMBL:AY305378) (103 aa) fasta scores: E(): 1.6e-07, 35% id in 100 aa, and to Ralstonia solanacearum putative HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 2.5e-10, 41.05% id in 95 aa. Possible alternative translational start site | genbank | 52209697 | CAH35656.1 | 128 | 1921337 | 1921723 | |
| 146432 | hypothetical | BPSL1659 | putative exported protein C-terminal region similar to C-terminal region of Escherichia coli, and Escherichia coli O157:H7 outer membrane protein A precursor OmpA or TolG or Tut or Con or b0957 or z1307 or ecs1041 SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 2.1e-12, 38.36% id in 159 aa. N-terminal region has low similarities to exported proteins/lipoproteins | genbank | 52209698 | CAH35657.1 | 299 | 1922210 | 1923109 | |
| 146433 | hypothetical | BPSL1660 | putative outer membrane protein Similar to Xanthomonas maltophilia SmeC SWALL:Q9RBY7 (EMBL:AF173226) (471 aa) fasta scores: E(): 2.3e-06, 23.89% id in 477 aa, and to Caulobacter crescentus outer membrane protein RsaF SWALL:Q9RQV0 (EMBL:AF062345) (527 aa) fasta scores: E(): 1.4e-05, 23.3% id in 532 aa | genbank | 52209699 | CAH35658.1 | 599 | 1923238 | 1925037 | |
| 146434 | hypothetical | BPSL1661 | putative hemolysin-related protein Similar to the C-terminal region of Ralstonia solanacearum putative hemagglutinin/hemolysin-related protein rsp1180 or rs05070 SWALL:Q8XQP2 (EMBL:AL646083) (4106 aa) fasta scores: E(): 6.4e-92, 30.67% id in 3218 aa, and also to the C-terminal region of Escherichia coli O157:H7 putative RTX family exoprotein z0615 SWALL:Q8X4H5 (EMBL:AE005229) (5188 aa) fasta scores: E(): 4e-38, 26.08% id in 3209 aa. Note: Contains a repeat region between residue 538 and residue 1362 | genbank | 52209700 | CAH35659.1 | 3229 | 1925148 | 1934837 | |
| 146435 | hypothetical | BPSL1662 | hypothetical protein No significant database matches | genbank | 52209701 | CAH35660.1 | 169 | 1934933 | 1935442 | |
| 146436 | hypothetical | BPSL1663 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp0167 rsp0167 or rs04679 SWALL:Q8XTE6 (EMBL:AL646076) (304 aa) fasta scores: E(): 7.2e-38, 42.43% id in 271 aa | genbank | 52209702 | CAH35661.1 | 291 | 1935439 | 1936314 | |
| 146437 | hypothetical | BPSL1664 | putative toxin transport-related membrane protein Similar to the C-terminal region of Vibrio cholerae toxin secretion ATP-binding protein vca1084 SWALL:Q9KKL9 (EMBL:AE004433) (704 aa) fasta scores: E(): 1.4e-62, 34.99% id in 563 aa, and of Pasteurella haemolytica-like sp. leukotoxin secretion ATP-binding protein LktB SWALL:HLYB_PASSP (SWALL:P55122) (708 aa) fasta scores: E(): 5.3e-37, 27.82% id in 575 aa, and to the full length of Ralstonia solanacearum putative composite ATP-binding transmembrane ABC transporter protein rsp1182 or rs05072 SWALL:Q8XQP0 (EMBL:AL646083) (739 aa) fasta scores: E(): 1.6e-45, 28.65% id in 719 aa | genbank | 52209703 | CAH35662.1 | 766 | 1936340 | 1938640 | |
| 146438 | hypothetical | BPSL1665 | putative toxin-related secretion protein Similar to Rhizobium meliloti putative toxin secretion transmembrane protein r02036 or smc04208 SWALL:Q92NX2 (EMBL:AL591789) (436 aa) fasta scores: E(): 1.6e-27, 33.25% id in 439 aa, and to Vibrio cholerae secretion protein, HlyD family vca1080 SWALL:Q9KKM3 (EMBL:AE004433) (481 aa) fasta scores: E(): 6.4e-27, 34.25% id in 435 aa | genbank | 52209704 | CAH35663.1 | 471 | 1938631 | 1940046 | |
| 146439 | hypothetical | BPSL1666 | hypothetical protein Very low similarities to any database matches to the full length of the CDS. The matches are reduced to the TPR domains that this CDS contains, e.g. Methanosarcina acetivorans TPR-domain containing protein ma1613 SWALL:Q8TQD1 (EMBL:AE010832) (1885 aa) fasta scores: E(): 1.6e-07, 21.22% id in 1164 aa | genbank | 52209705 | CAH35664.1 | 1454 | 1940157 | 1944521 | |
| 146440 | hypothetical | BPSL1667 | hypothetical protein Similar in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 1.1e-31, 36.16% id in 365 aa | genbank | 52209706 | CAH35665.1 | 556 | 1944518 | 1946188 | |
| 146441 | hypothetical | BPSL1668 | putative adenylylsulfate kinase Similar in its C-terminal region to Bacillus subtilis probable adenylylsulfate kinase CysC SWALL:CYC1_BACSU (SWALL:O34577) (197 aa) fasta scores: E(): 6.5e-37, 51.81% id in 193 aa, and similar to the C-terminal region (where the adenylylsulfate kinase activity has been mapped) Arabidopsis thaliana adenylylsulfate kinase 1, chloroplast precursor Akn1 or at2g14750 or f26c24.11 or t6b13.1 SWALL:KAP1_ARATH (SWALL:Q43295) (276 aa) fasta scores: E(): 3.1e-33, 43.61% id in 227 aa | genbank | 52209707 | CAH35666.1 | 283 | 1946220 | 1947071 | |
| 146442 | pseudogene | pseudogene | BPSL1668A | putative transposase protein (fragment) Similar to internal regions of Ralstonia solanacearum ISRso5-transposase protein TISRso5 SWALL:Q8Y371 (EMBL:AL646057) (363 aa) fasta scores: E(): 4.4e-07, 79.41% id in 34 aa, and to Agrobacterium tumefaciens transposase Orf1 SWALL:Q44454 (EMBL:Z18270) (366 aa) fasta scores: E(): 0.18, 54.54% id in 33 aa | genbank | 32 | 1947169 | 1947264 | ||
| 146443 | hypothetical | BPSL1669 | putative two component system, response regulator Similar to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 3.5e-28, 40.69% id in 231 aa, and to Mycobacterium bovis sensory transduction protein Regx3 SWALL:RGX3_MYCBO (SWALL:O07130) (227 aa) fasta scores: E(): 1.4e-21, 34.51% id in 226 aa | genbank | 52209708 | CAH35668.1 | 237 | 1948084 | 1948797 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146444 | hypothetical | BPSL1670 | putative transposase Similar to the N-terminal region of Streptomyces coelicolor putative transposase sco0083 or scj11.12 SWALL:Q9RI92 (EMBL:AL109949) (282 aa) fasta scores: E(): 4.8e-27, 44.63% id in 233 aa, and to the central part of Burkholderia cepacia insertion element IS402 hypothetical 16.2 kDa protein SWALL:YI22_BURCE (SWALL:P24537) (147 aa) fasta scores: E(): 3.6e-26, 64.17% id in 134 aa | genbank | 52209709 | CAH35669.1 | 231 | 1949196 | 1949891 | |
| 146445 | hypothetical | BPSL1671 | putative exported protein No significant database matches | genbank | 52209710 | CAH35670.1 | 159 | 1950345 | 1950824 | |
| 146446 | hypothetical | BPSL1672 | hypothetical protein No significant database matches | genbank | 52209711 | CAH35671.1 | 348 | 1951025 | 1952071 | |
| 146447 | pseudogene | pseudogene | BPSL1673 | putative tranposase (fragment) Similar to the N-terminal regions of Bacteriophage phiE125 TnpB SWALL:Q8W6R2 (EMBL:AF447491) (284 aa) fasta scores: E(): 1.9e-30, 88.76% id in 89 aa, and Xanthomonas axonopodis transposase xac2432 SWALL:AAM37283 (EMBL:AE011880) (301 aa) fasta scores: E(): 3.4e-15, 56.18% id in 89 aa | genbank | 90 | 1952392 | 1952661 | ||
| 146448 | hypothetical | BPSL1674 | putative outer membrane porin protein precursor Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.4e-12, 30.14% id in 408 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.2e-44, 40.66% id in 391 aa | genbank | 52209712 | CAH35673.1 | 366 | 1953075 | 1954175 | |
| 146449 | hypothetical | BPSL1675 | putative transposase Similar to the C-terminal region of Ralstonia solanacearum transposase Tnp SWALL:Q9RBZ6 (EMBL:AF167984) (321 aa) fasta scores: E(): 1.4e-06, 44.04% id in 84 aa, and of Burkholderia cepacia putative transposase SWALL:Q93L07 (EMBL:AF029344) (327 aa) fasta scores: E(): 2.1e-05, 43.21% id in 81 aa | genbank | 52209713 | CAH35674.1 | 159 | 1954466 | 1954945 | |
| 146450 | hypothetical | BPSL1676 | putative exported histidine ammonia-lyase Similar to Rhizobium meliloti putative histidine ammonia-lyase ra0165 or sma0306 SWALL:Q930N0 (EMBL:AE007210) (546 aa) fasta scores: E(): 1.8e-108, 55.01% id in 538 aa, and to Rhizobium loti histidine ammonia-lyase mll7124 SWALL:Q987B4 (EMBL:AP003011) (498 aa) fasta scores: E(): 2.8e-21, 32.15% id in 510 aa. Note: Similar also to many eukaryotic proteins | genbank | 52209714 | CAH35675.1 | 544 | 1955029 | 1956663 | |
| 146451 | hypothetical | BPSL1677 | putative transport-related, integral membrane protein Similar to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.9e-51, 36.72% id in 422 aa, and to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.6e-63, 44.55% id in 404 aa | genbank | 52209715 | CAH35676.1 | 427 | 1956681 | 1957964 | |
| 146452 | hypothetical | BPSL1678 | putative urocanate hydratase Similar to Bacillus subtilis urocanate hydratase HutU or ee57A SWALL:HUTU_BACSU (SWALL:P25503) (552 aa) fasta scores: E(): 3.4e-108, 49.9% id in 543 aa, and to Caulobacter crescentus urocanate hydratase cc0957 SWALL:Q9A9M1 (EMBL:AE005772) (554 aa) fasta scores: E(): 2.6e-108, 51.2% id in 539 aa | genbank | 52209716 | CAH35677.1 | 546 | 1958040 | 1959680 | |
| 146453 | hypothetical | BPSL1679 | conserved hypothetical protein Similar to Agrobacterium tumefaciens hypothetical protein atu3042 or agr_l_3523 SWALL:Q8UBH4 (EMBL:AE009235) (358 aa) fasta scores: E(): 6.2e-11, 25.13% id in 366 aa, and to Rhizobium loti hypothetical protein mll9130 SWALL:Q982D2 (EMBL:AP003015) (361 aa) fasta scores: E(): 4.6e-10, 26.03% id in 338 aa | genbank | 52209717 | CAH35678.1 | 363 | 1959699 | 1960790 | |
| 146454 | hypothetical | BPSL1680 | putative LysR-family transcriptional regulatory protein Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-28, 35.95% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 6.5e-30, 38.72% id in 297 aa | genbank | 52209718 | CAH35679.1 | 296 | 1960971 | 1961861 | |
| 146455 | hypothetical | BPSL1681 | putative allantoinase Similar to Bacillus subtilis allantoinase PucH SWALL:ALN_BACSU (SWALL:O32137) (446 aa) fasta scores: E(): 6.1e-31, 29.27% id in 444 aa, and to Streptomyces coelicolor probable allantoinase sco6247 or scah10.12 or stah10.12 SWALL:ALN_STRCO (SWALL:Q9RKU5) (445 aa) fasta scores: E(): 9.5e-31, 31.62% id in 449 aa | genbank | 52209719 | CAH35680.1 | 461 | 1961961 | 1963346 | |
| 146456 | hypothetical | BPSL1682 | family M20 unassigned peptidase Similar to Bacillus stearothermophilus N-carbamoyl-L-amino acid hydrolase AmaB SWALL:AMB1_BACST (SWALL:P37113) (409 aa) fasta scores: E(): 1.8e-48, 40.04% id in 407 aa, and to Pseudomonas sp. hydantoin utilization protein C HyuC SWALL:HYUC_PSESN (SWALL:Q01264) (414 aa) fasta scores: E(): 1.6e-41, 35.04% id in 408 aa | genbank | 52209720 | CAH35681.1 | 426 | 1963343 | 1964623 | |
| 146457 | pseudogene | pseudogene | BPSL1683 | conserved hypothetical protein (fragment) Similar to the C-terminal regions of Mycobacterium tuberculosis hypothetical 23.8 kDa protein rv1674c or mtv047.09c or mt1712 SWALL:O53921 (EMBL:AL022002) (218 aa) fasta scores: E(): 3.8e-21, 59.81% id in 107 aa, and Mycobacterium tuberculosis hypothetical protein rv0324 or mt0339 or mtcy63.29 SWALL:O08446 (EMBL:Z96800) (226 aa) fasta scores: E(): 1.9e-17, 51.92% id in 104 aa | genbank | 110 | 1964676 | 1965008 | ||
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146458 | pseudogene | pseudogene | BPSL1684 | putative transposase (fragment) Similar to the C-terminal regions of Shigella sonnei transposase for insertion sequence element IS629 SWALL:T629_SHISO (SWALL:P16942) (296 aa) fasta scores: E(): 5.2e-31, 60.26% id in 151 aa, and bacteriophage phiE125 hypothetical protein TnpB SWALL:Q8W6R2 (EMBL:AF447491) (284 aa) fasta scores: E(): 2.3e-50, 85.52% id in 152 aa | genbank | 91 | 1965223 | 1965498 |