Transcribed locus, strongly similar to NP_956050.1 ribosomal protein L5 [Danio rerio]

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UGID:2437279 UniGene Dr.76005 Danio rerio (zebrafish)

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Transcribed locus, strongly similar to NP_956050.1 ribosomal protein L5 [Danio rerio]

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_956050.1	ribosomal protein L5	D. rerio	98.6	276
NP_001079377.1	similar to ribosomal protein L5	X. laevis	86.1	274
NP_000960.2	ribosomal protein L5	H. sapiens	85.9	276
XP_001479502.1	PREDICTED: hypothetical protein	M. musculus	85.5	276
NP_001036387.1	Ribosomal protein L5 CG17489-PA, isoform A	D. melanogaster	65.1	278
NP_198790.1	60S ribosomal protein L5 (RPL5B)	A. thaliana	56.8	273
XP_001689859.1	ribosomal protein L5, component of cytosolic 80S ribosome and 60S large subunit	C. reinhardtii	52.0	272
NP_495811.1	Ribosomal Protein, Large subunit family member (rpl-5)	C. elegans	51.5	270
XP_323671.1	60S RIBOSOMAL PROTEIN L5 (CPR4)	N. crassa	50.9	280
NP_015194.1	Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly; Rpl5p	S. cerevisiae	48.7	276

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	muscle; whole body; mixed; reproductive system; fin; liver; uncharacterized tissue; brain; intestine; lymphoreticular; bone; heart; olfactory rosettes

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (10 of 142) [Show all sequences]

AA658741.1	Clone zbr2460	fin	3' read	P
AA658759.1	Clone zbr2480	fin	3' read	P
AI353206.1		heart	5' read	P
AI384688.1		fin	3' read	PA
AI384691.1		fin	3' read	PA
AI545800.1	Clone IMAGE:3716768	mixed	5' read	P
AI584644.1	Clone IMAGE:3718301	mixed	5' read	PA
AW232722.1		olfactory rosettes	3' read	P
AW567204.1		fin	3' read	PA
AW777651.1		whole body	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria