proteins
| 70 proteins |
J | COG0244 | Ribosomal protein L10 | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Fusobacterium nucleatum (Fusobacterales | Fusobacteria (class)) | ||||
| FN2038 | ||||
170 letters 0
0 825 = |||FN2038 (170) = 1
0 321 = BH0121 (165) = 3
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FN2038
(170 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
FN2038 322 2e-88
BH0121 128 7e-30
SPy1072 125 3e-29
lin0282 124 9e-29
CAC3146 122 4e-28
BS_rplJ 121 6e-28
SA0497 119 2e-27
L0407 119 3e-27
SP1355 117 2e-26
ML1896 93 2e-19
MYPU_2900 93 3e-19
DR2044 91 1e-18
Cgl0478 86 3e-17
Cj0476 82 7e-16
BMEI0747 79 4e-15
AGc3572 77 2e-14
BB0391 75 5e-14
BU036 74 1e-13
BH0221 33 0.22
APE1865 29 4.2
AF1984 28 9.3
AF0197 28 9.3
jhp1423_2 28 9.3
# >FN2038
# Length = 170
#
# Score = 322 bits (825), Expect = 2e-88
# Identities = 170/170 (100%), Positives = 170/170 (100%)
#
# Query: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
# MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI
# Sbjct: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
#
# Query: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
# ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK
# Sbjct: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
#
# Query: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSAE 170
# KVSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSAE
# Sbjct: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSAE 170
#
#
# >BH0121
# Length = 165
#
# Score = 128 bits (321), Expect = 7e-30
# Identities = 72/161 (44%), Positives = 104/161 (63%), Gaps = 6/161 (3%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# KK++V E+ K+K++QS V VDY+G+ V E T LRKQ+RE G E+ V KN + + A + +
# Sbjct: 7 KKQIVTEIATKLKESQSTVVVDYRGLNVAEVTELRKQLREAGCEFKVYKNTMTRRAAEVA 66
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# + + +++L G TA AF D +APAK + AK + +IK G + G SV+
# Sbjct: 67 ELTE-LNDVLVGPTAIAFHNEDAIAPAKIINSFAKEH-----EALEIKAGVIEGNVASVE 120
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKE 166
# EV+ LA+LPSRE LLSMLL+ + P+R A AT A+AD+KE
# Sbjct: 121 EVKALAELPSREGLLSMLLSVLQAPVRNFALATKAVADQKE 161
#
#
# >SPy1072
# Length = 166
#
# Score = 125 bits (315), Expect = 3e-29
# Identities = 67/164 (40%), Positives = 104/164 (62%), Gaps = 6/164 (3%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K E V + EK+K A S+V VD +G+ V+++T+LR+ +RE+G E+ V KN + A +++
# Sbjct: 9 KAEQVELIAEKMKAAASIVIVDSRGLTVDQDTVLRRSLRESGVEFKVIKNSILTRAAEKA 68
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# G+ D ++ G +A AF D +APAK + D K D +IKGG + G S +
# Sbjct: 69 GL-DELKDVFVGPSAVAFSNEDVIAPAKVINDFTKTA-----DALEIKGGAIEGAVSSKE 122
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSA 169
# E++ LA LP+RE +LSMLL+ + P+R +AYA A+A+ KEG+A
# Sbjct: 123 EIQALATLPNREGMLSMLLSVLQAPVRNVAYAVKAVAENKEGAA 166
#
#
# >lin0282
# Length = 166
#
# Score = 124 bits (311), Expect = 9e-29
# Identities = 73/164 (44%), Positives = 100/164 (60%), Gaps = 6/164 (3%)
#
# Query: 4 QVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALK 63
# + K+ V E+ K+ + S V VDY+G+ V E T LRKQ+R+ G E+ V KN L + A++
# Sbjct: 6 EAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITDLRKQLRDAGIEFKVYKNSLTRRAVE 65
#
# Query: 64 ESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVS 123
# +G E + L G A AF D VAPAK + D AK + +IK G + GK S
# Sbjct: 66 ANGYE-GLEGALTGPNAIAFSNEDVVAPAKILNDFAKDH-----EALEIKAGVIEGKVAS 119
#
# Query: 124 VKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEG 167
# ++E++ LA LPSRE LLSML N + P+R LA AT A+AD+KEG
# Sbjct: 120 LEEIKALATLPSREGLLSMLCNVLQAPVRGLAIATKAVADQKEG 163
#
#
# >CAC3146
# Length = 168
#
# Score = 122 bits (306), Expect = 4e-28
# Identities = 68/167 (40%), Positives = 98/167 (57%), Gaps = 6/167 (3%)
#
# Query: 4 QVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALK 63
# Q+K++ VAE+ EK+ K ++++ V YQG+ V E+T LRK +RE G EY V KN L A+
# Sbjct: 7 QLKEQKVAEIKEKMGKTEAMIMVKYQGLNVEEDTELRKALREAGVEYRVYKNSLAVRAIN 66
#
# Query: 64 ESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVS 123
# E G E + LEG A A Y+DP APA+ + D AK ++ GY+ G+
# Sbjct: 67 ELGYE-GIAQYLEGPIAIAMSYDDPTAPARIINDFAKTH-----KALELVAGYVQGEVFD 120
#
# Query: 124 VKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSAE 170
# V +V+ELA +P++E L++ LL S P+ AY AI DKKE +
# Sbjct: 121 VNKVKELASVPAKEVLIAKLLGSFKAPLSNFAYLLSAIKDKKEAEEQ 167
#
#
# >BS_rplJ
# Length = 166
#
# Score = 121 bits (304), Expect = 6e-28
# Identities = 69/165 (41%), Positives = 105/165 (62%), Gaps = 6/165 (3%)
#
# Query: 2 ATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIA 61
# A + KK +V E+ K+K+++S + VDY+G+ V+E T LRKQ+RE E V KN + + A
# Sbjct: 4 AIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANVESKVYKNTMTRRA 63
#
# Query: 62 LKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKK 121
# ++++ + + ++ L G A AF D VAPAK + D AK + +IK G + GK
# Sbjct: 64 VEQAEL-NGLNDFLTGPNAIAFSTEDVVAPAKVLNDFAKNH-----EALEIKAGVIEGKV 117
#
# Query: 122 VSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKE 166
# +V+EV+ LA+LP RE LLSMLL+ + P+R LA A A+A++KE
# Sbjct: 118 STVEEVKALAELPPREGLLSMLLSVLKAPVRNLALAAKAVAEQKE 162
#
#
# >SA0497
# Length = 166
#
# Score = 119 bits (299), Expect = 2e-27
# Identities = 68/167 (40%), Positives = 99/167 (58%), Gaps = 6/167 (3%)
#
# Query: 4 QVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALK 63
# + KK+LV E+ E + + S V VDY+G+ V E T LR Q+RE G EY V KN + + A +
# Sbjct: 6 EAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMVRRAAE 65
#
# Query: 64 ESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVS 123
# ++G+E DE L G TA A D VA AK + AK + +IK G + G ++
# Sbjct: 66 KAGIE-GLDEFLTGPTAIATSSEDAVAAAKVISGFAKDH-----EALEIKSGVMEGNVIT 119
#
# Query: 124 VKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSAE 170
# +EV+ + LPS + L+SMLL+ + P+R AYA AI ++KE +AE
# Sbjct: 120 AEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE 166
#
#
# >L0407
# Length = 171
#
# Score = 119 bits (298), Expect = 3e-27
# Identities = 67/164 (40%), Positives = 102/164 (61%), Gaps = 6/164 (3%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K ELV +K+ +A S+V D +G+ V+++T LRKQ+RE G E+ V KN + + A +++
# Sbjct: 14 KAELVDVYAQKMTEAASIVVADSRGLSVDQDTQLRKQLREAGVEFKVVKNSVLRRAAEKA 73
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# G+E E G +A AF D VAPAK + D AK + +IK G + GK S +
# Sbjct: 74 GLE-GLSEAFSGPSAVAFSNEDVVAPAKVLADFAK-----DAENLEIKAGVIEGKVSSKE 127
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSA 169
# E++ +A LPSR+ LLSMLL+ + P+R +A A A+A+K+E +A
# Sbjct: 128 EIQAIASLPSRDGLLSMLLSVLQAPVRNVALAVKAVAEKEESAA 171
#
#
# >SP1355
# Length = 166
#
# Score = 117 bits (292), Expect = 2e-26
# Identities = 66/164 (40%), Positives = 102/164 (61%), Gaps = 6/164 (3%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K ELV + EK+K A S+V VD +G+ V ++T+LR+++R + EY V KN + + A +++
# Sbjct: 9 KAELVDVVAEKMKAAASIVVVDARGLTVEQDTVLRRELRGSEVEYKVIKNSILRRAAEKA 68
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# G+ED + G +A AF D +APAK + D +K + +IKGG + G S +
# Sbjct: 69 GLED-LASVFVGPSAVAFSNEDVIAPAKILNDFSK-----NAEALEIKGGAIEGAVASKE 122
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEGSA 169
# E+ LA LP+RE LLSMLL+ + P+R +A A A+A+ KE +A
# Sbjct: 123 EILALATLPNREGLLSMLLSVLQAPVRNVALAVKAVAESKEDAA 166
#
#
# >ML1896
# Length = 177
#
# Score = 93.2 bits (230), Expect = 2e-19
# Identities = 67/176 (38%), Positives = 92/176 (52%), Gaps = 18/176 (10%)
#
# Query: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
# MA K VA + E+ K A + + +Y+G+ V LR+ + A Y VAKN L K
# Sbjct: 1 MARADKATAVANIAEQFKAATAALITEYRGLTVANLAELRRSLT-GSASYAVAKNTLIKR 59
#
# Query: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
# A E G+E DE+ G TA AF +PV AKA+ AK + KA + IKGGY+ G
# Sbjct: 60 AASEVGIE-GLDELFAGPTAIAFVTGEPVDAAKAIKTFAK-EHKALV----IKGGYMDGH 113
#
# Query: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLG-----------PIRKLAYATVAIADKK 165
# ++V EVE +A L SRE LL+ L +M G P ++A T A+ +KK
# Sbjct: 114 PMTVAEVERIADLESREVLLAKLAGAMKGTFAKAIGLFNAPTSQMARLTAALQEKK 169
#
#
# >MYPU_2900
# Length = 186
#
# Score = 92.8 bits (229), Expect = 3e-19
# Identities = 54/163 (33%), Positives = 93/163 (56%), Gaps = 6/163 (3%)
#
# Query: 4 QVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALK 63
# Q+KK++V E+ +KI +QS+ +Y+G+ V + LRK+ +++ E V KNRL K+A +
# Sbjct: 27 QIKKDIVVEITKKINDSQSLFLAEYRGLTVAKLLNLRKEAKKHNVEIKVYKNRLVKLATQ 86
#
# Query: 64 ESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVS 123
# + G D D+ L G F F + AK + + AK K L K G GK V
# Sbjct: 87 KLGHSD-LDKFLVGPNLFVFSNELGMDGAKVLAEFAKKNKKLVL-----KAGIFDGKVVD 140
#
# Query: 124 VKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKE 166
# V+ +A+LP+ E+ L++L +S+LGP+R+++ + + D+ +
# Sbjct: 141 AAGVKAVAELPTYEEALTILASSLLGPLRQISLSFKLLVDENK 183
#
#
# >DR2044
# Length = 169
#
# Score = 90.9 bits (224), Expect = 1e-18
# Identities = 54/167 (32%), Positives = 87/167 (51%), Gaps = 5/167 (2%)
#
# Query: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
# MA + ++ + L + ++ ++ VDYQG+ + T LRK +RE G + +VAKN L +
# Sbjct: 1 MANEKNQQTLGSLKDSLQGIETFYVVDYQGLTAGQLTQLRKDIREKGGQLIVAKNTLLNL 60
#
# Query: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
# AL+E G + FD+ L+G +A DP AKA+ D A + + +KGG++ G
# Sbjct: 61 ALQEGGRD--FDDALKGPSALVLAQEDPAGVAKALSDAAGRNDRG---IPTVKGGFVEGS 115
#
# Query: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKEG 167
# KV V V+ LA L S+ L + L+ + + A +K EG
# Sbjct: 116 KVDVAVVQRLASLGSKTTLQAELVGVLSAHLSNFVGILEAYREKLEG 162
#
#
# >Cgl0478
# Length = 171
#
# Score = 86.3 bits (212), Expect = 3e-17
# Identities = 60/177 (33%), Positives = 93/177 (51%), Gaps = 18/177 (10%)
#
# Query: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
# MA + +AEL + + +VV +Y+G+ V + T LRK + + +Y VAKN L KI
# Sbjct: 1 MANPRNEAALAELKARFAETDTVVLTEYRGLTVAQTTELRKALGFD-VQYSVAKNTLVKI 59
#
# Query: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
# A E+GVE D++L G TA AF + V AK + K + F +KGGY+ G
# Sbjct: 60 AANEAGVE-GLDDLLTGPTAVAFIKGEAVDTAKVL-----KKFGEENKAFVVKGGYMDGN 113
#
# Query: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLG-----------PIRKLAYATVAIADKKE 166
# ++ ++V +A+L +RE L+ L +M G P ++A VA+ DKK+
# Sbjct: 114 ALTAEQVNAIAELDNRETTLAKLAGAMKGSLAKAAGLFNAPASQVARLAVALQDKKD 170
#
#
# >Cj0476
# Length = 159
#
# Score = 81.6 bits (200), Expect = 7e-16
# Identities = 53/166 (31%), Positives = 86/166 (50%), Gaps = 9/166 (5%)
#
# Query: 1 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKI 60
# M K E++A+L E K ++++V +Y+G+ + LR REN + + KN L I
# Sbjct: 1 MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNARENNVKVQIVKNTLANI 60
#
# Query: 61 ALKESGVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGK 120
# AL SG +L+ + + +G D ++ +K AK + D F+IK ++ G+
# Sbjct: 61 ALNNSGKTGL---VLKDTNIYLWG-EDQLSVSKVA-----AKFEENNDKFEIKTAHIEGE 111
#
# Query: 121 KVSVKEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKKE 166
# V +V+ LAK+PSR +LL+MLL PI A+ +KKE
# Sbjct: 112 VADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKE 157
#
#
# >BMEI0747
# Length = 208
#
# Score = 79.3 bits (194), Expect = 4e-15
# Identities = 57/157 (36%), Positives = 82/157 (51%), Gaps = 7/157 (4%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K+E VA L K++ SVV Y G+ V + + LR +MR+ G VAKNRL KIAL+ +
# Sbjct: 42 KREFVAWLNGAFKESGSVVVAHYTGLTVAQMSDLRSKMRDAGGSVKVAKNRLAKIALQGT 101
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# E D + G T A+ NDP+ K + AKA D I GG + ++
# Sbjct: 102 ESEGIAD-LFTGQTVVAYA-NDPITAPKVAVEFAKAN-----DKLVILGGAMGATTLNAD 154
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIA 162
# V+ LA LPS ++L + L+ + P ++LA T A A
# Sbjct: 155 GVKSLASLPSLDELRAKLVGMIQTPAQRLAVLTSAPA 191
#
#
# >AGc3572
# Length = 172
#
# Score = 76.6 bits (187), Expect = 2e-14
# Identities = 55/160 (34%), Positives = 80/160 (49%), Gaps = 9/160 (5%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K+E V EL E K + SVV Y G+ V + R +MR G VAKNRL KIAL+
# Sbjct: 6 KREFVTELNEVFKASGSVVVAHYAGVTVAQMNDFRSKMRAAGGTVKVAKNRLAKIALQ-- 63
#
# Query: 66 GVE-DSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSV 124
# G E + + +G T A+ + +AP K V D AK D + GG + ++
# Sbjct: 64 GTESEGMTNLFKGQTLIAYSVDPMIAP-KVVMDFAKTN-----DKVVVLGGSMGATTLNA 117
#
# Query: 125 KEVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADK 164
# + V+ LA LPS ++L + LL + P ++A A A +
# Sbjct: 118 EAVKSLATLPSLDELRAKLLGLLNAPATRVATVVAAPASQ 157
#
#
# >BB0391
# Length = 168
#
# Score = 75.5 bits (184), Expect = 5e-14
# Identities = 46/160 (28%), Positives = 80/160 (49%), Gaps = 7/160 (4%)
#
# Query: 6 KKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K E+ L + I Q++ F+DY+G+ V + T LR ++ V KN + K+ LKE
# Sbjct: 15 KLEMFDLLKQFIDSKQNLFFLDYRGLNVAQLTELRNKIEGEHGSLKVVKNNIMKMVLKEK 74
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# + + D L G T + AK +D K+ K+KGG++ G+
# Sbjct: 75 NI-NVVDSCLVGPTVVVTALEEANVIAKIFYDFVKSST------LKVKGGFVLGEFYDEA 127
#
# Query: 126 EVEELAKLPSREQLLSMLLNSMLGPIRKLAYATVAIADKK 165
# +V+ +KLP++++ +S+ + + P+ KLA A+AD K
# Sbjct: 128 KVQAYSKLPTKKESISLFASVLKAPVSKLARTLKALADVK 167
#
#
# >BU036
# Length = 165
#
# Score = 74.3 bits (181), Expect = 1e-13
# Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
#
# Query: 7 KELVAELVEKIKK-AQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKES 65
# K+++ + KI A S V D QG+ VN+ LRK RE G + + +N L +A+K +
# Sbjct: 8 KKIIVSKINKISNTALSAVTADLQGVCVNKINELRKSGREVGVKMSIVQNTLLSLAIKNT 67
#
# Query: 66 GVEDSFDEILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# V + + L+GST A+ P + A+ + +K + FKI G GK +S+
# Sbjct: 68 -VFECLKKKLKGSTFIAYSMIHPGSGARLFKEFSKKNTQ-----FKITGAAFEGKLLSIL 121
#
# Query: 126 EVEELAKLPS-REQLLSMLLNSMLGPIRKLAYATVAIADKKEGS 168
# E+ +LA +P+ +E ++ +LL + KL Y AI KKE S
# Sbjct: 122 EINQLADMPTYKEAIIKLLLTWKMLIAGKLIYTLSAIKQKKETS 165
#
#
# >BH0221
# Length = 147
#
# Score = 33.5 bits (75), Expect = 0.22
# Identities = 33/135 (24%), Positives = 61/135 (44%), Gaps = 6/135 (4%)
#
# Query: 8 ELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKESGV 67
# +L A E+ + + V Q ++ + + ++NG ++VA N A E GV
# Sbjct: 12 DLEASSPEEAIRKTGKLLVGNQLVEDEYVEAMVRSYQKNGPYFVVAPNIALPHARPEDGV 71
#
# Query: 68 EDSFDEILEGSTAFAFGY--NDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKVSVK 125
# +++ + +FG+ NDPV + VF LA A + L V + K L G + ++
# Sbjct: 72 KEAAVAFVRLKRPISFGHSSNDPV---RFVFALAAASSGEHLQVLQ-KLMQLLGNRENIA 127
#
# Query: 126 EVEELAKLPSREQLL 140
# + ++ +QLL
# Sbjct: 128 RLANVSDYKGIDQLL 142
#
#
# >APE1865
# Length = 370
#
# Score = 29.3 bits (64), Expect = 4.2
# Identities = 14/49 (28%), Positives = 25/49 (50%)
#
# Query: 74 ILEGSTAFAFGYNDPVAPAKAVFDLAKAKAKAKLDVFKIKGGYLTGKKV 122
# ++ G+ + YN+P + V+D+AK K L + GY+T + V
# Sbjct: 136 LVYGADGITYTYNEPTIFFETVYDVAKEAKKHGLFNTMVTNGYMTPEAV 184
#
#
# >AF1984
# Length = 139
#
# Score = 28.1 bits (61), Expect = 9.3
# Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
#
# Query: 5 VKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLRKQMRENGAEYLVAKNRLFKIALKE 64
# V K +++ ++ KA V+V +G+ +NE R +M A V +RL + L +
# Sbjct: 41 VSKSTAQKMLNELSKAGYGVYVPKKGLVLNE----RGKMEARAA---VRMHRLIECLLAD 93
#
# Query: 65 SGVED 69
# GVED
# Sbjct: 94 LGVED 98
#
#
# >AF0197
# Length = 662
#
# Score = 28.1 bits (61), Expect = 9.3
# Identities = 16/48 (33%), Positives = 27/48 (55%), Gaps = 2/48 (4%)
#
# Query: 8 ELVAELVEKIKKAQSVVFVDYQGIKVNEE--TLLRKQMRENGAEYLVA 53
# E+++ LV ++K + V GI+VNEE + + ++EN Y VA
# Sbjct: 552 EIISSLVVEVKGKIFLFVVPAHGIEVNEELKEKINRALKENLGAYFVA 599
#
#
# >jhp1423_2
# Length = 338
#
# Score = 28.1 bits (61), Expect = 9.3
# Identities = 19/72 (26%), Positives = 34/72 (46%), Gaps = 14/72 (19%)
#
# Query: 2 ATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETLLR----------KQMRENGAEYL 51
# A K+ L+ E +E+ + + + G+K+NE L + KQ+ + E+L
# Sbjct: 182 ALNEKEALLDEFIEEHSNEEGL----FDGLKINESVLKKELKNATDLEDKQILKTALEWL 237
#
# Query: 52 VAKNRLFKIALK 63
# AKN+ K+ K
# Sbjct: 238 EAKNKALKMKNK 249
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.313 0.131 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,832,313
Number of Sequences: 192987
Number of extensions: 644127
Number of successful extensions: 2063
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1940
Number of HSP's gapped (non-prelim): 87
length of query: 170
length of database: 59,019,183
effective HSP length: 102
effective length of query: 68
effective length of database: 39,334,509
effective search space: 2674746612
effective search space used: 2674746612
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
S2: 61 (28.1 bits)