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Sample GSM67535 Query DataSets for GSM67535
Status Public on Nov 08, 2005
Title 100US_B_Illumina
Sample type RNA
 
Source Name PBMC
Organism(s) Homo sapiens
Characteristics Approximately 50 mL whole blood was collected from 30 adult, apparently healthy, volunteers using Acid Citrate Dextrose (ACD) as an anti-coagulant. Samples were processed immediately following blood draw. Cells were isolated by Ficoll gradient centrifugation and total RNA was isolated using Trizol (Invitrogen Life Technologies; Carlsbad, CA) according to manufacturer’s protocol, aliquoted and stored at -80°C until use. Whole placenta was collected and immediately frozen in liquid nitrogen. RNA was extracted using TRI reagent, purified using RNeasy columns (Qiagen; Valencia, CA), aliquoted and stored at -80°C until use. RNA mixtures (100:0, 95:5, 75:25, 50:50, 25:75, 0:100; PBMC: placenta) were prepared in single aliquots.
Extracted molecule total RNA
Label Illumina Standard
 
Description Technical labeling replicate of 100US_A_Illumina (GSM6734).
Data processing Quantile Normalized
 
Submission date Aug 08, 2005
Contact name Michael Barnes
E-mail(s) michael.barnes@cchmc.org
Phone 513-636-1319
Organization name Cincinnati Childrens Hospital Medical Center
Department Rheumatology
Lab Dr. David Glass
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL2725
Series (1)
GSE3077 Dillution series comparison of Affymetrix and Illumina Expression Platforms

Data table header descriptions
ID_REF
VALUE Expression

Data table
ID_REF VALUE
GI_10047089-S 137.1
GI_10047091-S 152.7583333
GI_10047093-S 761.5
GI_10047097-S 2125.241667
GI_10047099-S 206.15
GI_10047103-S 3990.758333
GI_10047105-S 164.2083333
GI_10047115-S 4540.816667
GI_10047117-S 120.4416667
GI_10047121-S 139.15
GI_10047123-S 541.4333333
GI_10047133-A 170.95
GI_10047133-I 189.3666667
GI_10048402-S null
GI_10092578-S 133.6583333
GI_10092585-S 372.6833333
GI_10092596-S 430.3083333
GI_10092602-S 175.2666667
GI_10092603-S 177.025
GI_10092611-A 929.8833333

Total number of rows: 24136

Table truncated, full table size 569 Kbytes.




Supplementary data files not provided

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