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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 11 > SNPs Localized to Interval 14 |
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D11S908 - D11S1345 106.2 cM - 119.8 cM / 373.28 cR - 405.99 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.73849 | APOC3 | Apolipoprotein C-III | CGAP-C-2295 |
SNPs | Gene Info |
| Hs.504062 | PHLDB1 | Pleckstrin homology-like domain, family B, member 1 | CGAP-C-12067 CGAP-C-12249 |
SNPs | Gene Info |
| Hs.524081 | DPAGT1 | Dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) | CGAP-C-50524 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.370510 | CADM1 | Cell adhesion molecule 1 | CGAP-C-249125 |
SNPs | Gene Info |
| Hs.437341 | BUD13 | BUD13 homolog (S. cerevisiae) | CGAP-C-609229 |
SNPs | Gene Info |
| Hs.288772 | TTC12 | Tetratricopeptide repeat domain 12 | CGAP-C-271772 |
SNPs | Gene Info |
| Hs.504003 | BACE1 | Beta-site APP-cleaving enzyme 1 | CGAP-C-48955 CGAP-C-248340 |
SNPs | Gene Info |
| Hs.161985 | TMPRSS4 | Transmembrane protease, serine 4 | CGAP-C-52831 |
SNPs | Gene Info |
| Hs.714294 | FXYD6 | FXYD domain containing ion transport regulator 6 | CGAP-C-237326 |
SNPs | Gene Info |
| Hs.504035 | IL10RA | Interleukin 10 receptor, alpha | CGAP-C-54140 |
SNPs | Gene Info |
| Hs.486360 | ATP5L | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G | CGAP-C-620999 |
SNPs | Gene Info |
| Hs.33642 | ARCN1 | Archain 1 | CGAP-C-251395 |
SNPs | Gene Info |
| Hs.504062 | PHLDB1 | Pleckstrin homology-like domain, family B, member 1 | CGAP-C-49667 |
SNPs | Gene Info |
| Hs.524078 | TRAPPC4 | Trafficking protein particle complex 4 | CGAP-C-48017 |
SNPs | Gene Info |
| Hs.234282 | VPS11 | Vacuolar protein sorting 11 homolog (S. cerevisiae) | CGAP-C-49705 CGAP-C-64815 |
SNPs | Gene Info |
| Hs.277704 | HYOU1 | Hypoxia up-regulated 1 | CGAP-C-61795 CGAP-C-602500 CGAP-C-602504 |
SNPs | Gene Info |
| Hs.132760 | SLC37A4 | Solute carrier family 37 (glucose-6-phosphate transporter), member 4 | CGAP-C-51600 CGAP-C-56701 |
SNPs | Gene Info |
| Hs.504091 | MIZF | MBD2-interacting zinc finger | CGAP-C-49314 |
SNPs | Gene Info |
| Hs.512676 | RPS25 | Ribosomal protein S25 | CGAP-C-613929 |
SNPs | Gene Info |
| Hs.524081 | DPAGT1 | Dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) | CGAP-C-52087 |
SNPs | Gene Info |
| Hs.524084 | RNF26 | Ring finger protein 26 | CGAP-C-47895 |
SNPs | Gene Info |
| Hs.706395 | RNF26 | Ring finger protein 26 | CGAP-C-603207 |
SNPs | Gene Info |
| Hs.504096 | CBL | Cas-Br-M (murine) ecotropic retroviral transforming sequence | CGAP-C-57143 CGAP-C-244165 |
SNPs | Gene Info |
| Hs.653181 | THY1 | Thy-1 cell surface antigen | CGAP-C-258301 |
SNPs | Gene Info |
| Hs.632102 | C1QTNF5 | C1q and tumor necrosis factor related protein 5 | CGAP-C-54200 |
SNPs | Gene Info |
| Hs.656475 | - | Transcribed locus | CGAP-C-257806 |
SNPs | Gene Info |
| Hs.599039 | MCAM | Melanoma cell adhesion molecule | CGAP-C-50839 CGAP-C-56749 |
SNPs | Gene Info |
| Hs.24598 | ARHGEF12 | Rho guanine nucleotide exchange factor (GEF) 12 | CGAP-C-54173 |
SNPs | Gene Info |
| Hs.445081 | OAF | OAF homolog (Drosophila) | CGAP-C-54575 |
SNPs | Gene Info |
| Hs.287749 | SC5DL | Sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like | CGAP-C-253694 |
SNPs | Gene Info |
| Hs.368592 | SORL1 | Sortilin-related receptor, L(DLR class) A repeats-containing | CGAP-C-252609 CGAP-C-252610 |
SNPs | Gene Info |
| Hs.44098 | LOC399959 | Hypothetical gene supported by BX647608 | CGAP-C-242064 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.413899 | HTR3A | 5-hydroxytryptamine (serotonin) receptor 3A | CGAP-C-2456365 |
SNPs | Gene Info |
| Hs.7165 | ZNF259 | Zinc finger protein 259 | CGAP-C-2438070 CGAP-C-2438072 CGAP-C-2438073 |
SNPs | Gene Info |
| Hs.633003 | APOA1 | Apolipoprotein A-I | CGAP-C-2435610 |
SNPs | Gene Info |
| Hs.503878 | NCAM1 | Neural cell adhesion molecule 1 | CGAP-C-2456934 CGAP-C-2456935 |
SNPs | Gene Info |
| Hs.648612 | PCSK7 | Proprotein convertase subtilisin/kexin type 7 | CGAP-C-2404959 CGAP-C-2404960 CGAP-C-2404961 CGAP-C-2404962 CGAP-C-2404964 CGAP-C-2404965 |
SNPs | Gene Info |
| Hs.597488 | PAFAH1B2 | Platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa | CGAP-C-2474089 CGAP-C-2474091 CGAP-C-2474092 CGAP-C-2474093 CGAP-C-2474096 CGAP-C-2474097 |
SNPs | Gene Info |
| Hs.370510 | CADM1 | Cell adhesion molecule 1 | CGAP-C-2451258 |
SNPs | Gene Info |
| Hs.73849 | APOC3 | Apolipoprotein C-III | CGAP-C-2464967 |
SNPs | Gene Info |
| Hs.534984 | - | Transcribed locus, strongly similar to NP_000031.1 apolipoprotein C-III precursor [Homo sapiens] | CGAP-C-2398759 CGAP-C-2398760 |
SNPs | Gene Info |
| Hs.410977 | TAGLN | Transgelin | CGAP-C-2473371 CGAP-C-2473375 CGAP-C-2473376 |
SNPs | Gene Info |
| Hs.503911 | NNMT | Nicotinamide N-methyltransferase | CGAP-C-2389615 |
SNPs | Gene Info |
| Hs.288772 | TTC12 | Tetratricopeptide repeat domain 12 | CGAP-C-2406499 CGAP-C-2406500 |
SNPs | Gene Info |
| Hs.530373 | LOC100131128 | Similar to translocase of inner mitochondrial membrane 8 homolog B (yeast) | CGAP-C-2434013 |
SNPs | Gene Info |
| Hs.504003 | BACE1 | Beta-site APP-cleaving enzyme 1 | CGAP-C-2414570 |
SNPs | Gene Info |
| Hs.75275 | UBE4A | Ubiquitination factor E4A (UFD2 homolog, yeast) | CGAP-C-2462518 |
SNPs | Gene Info |
| Hs.161985 | TMPRSS4 | Transmembrane protease, serine 4 | CGAP-C-2448976 |
SNPs | Gene Info |
| Hs.714294 | FXYD6 | FXYD domain containing ion transport regulator 6 | CGAP-C-2479968 CGAP-C-2479969 |
SNPs | Gene Info |
| Hs.258855 | MLL | Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) | CGAP-C-2440875 CGAP-C-2440876 CGAP-C-2455040 |
SNPs | Gene Info |
| Hs.3003 | CD3E | CD3e molecule, epsilon (CD3-TCR complex) | CGAP-C-2413634 CGAP-C-2413635 |
SNPs | Gene Info |
| Hs.486360 | ATP5L | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G | CGAP-C-2428698 CGAP-C-2428707 CGAP-C-2428714 |
SNPs | Gene Info |
| Hs.413137 | FXYD2 | FXYD domain containing ion transport regulator 2 | CGAP-C-2409848 CGAP-C-2409849 CGAP-C-2409850 |
SNPs | Gene Info |
| Hs.564188 | TMEM25 | Transmembrane protein 25 | CGAP-C-2436654 |
SNPs | Gene Info |
| Hs.533738 | C11orf60 | Chromosome 11 open reading frame 60 | CGAP-C-2410842 CGAP-C-2410843 |
SNPs | Gene Info |
| Hs.33642 | ARCN1 | Archain 1 | CGAP-C-2461709 CGAP-C-2461715 CGAP-C-2461716 CGAP-C-2461717 CGAP-C-2461718 |
SNPs | Gene Info |
| Hs.504062 | PHLDB1 | Pleckstrin homology-like domain, family B, member 1 | CGAP-C-2466165 CGAP-C-2466169 CGAP-C-2466170 |
SNPs | Gene Info |
| Hs.82609 | HMBS | Hydroxymethylbilane synthase | CGAP-C-2394200 CGAP-C-2394201 CGAP-C-2394202 CGAP-C-2394203 |
SNPs | Gene Info |
| Hs.524082 | NLRX1 | NLR family member X1 | CGAP-C-2482029 |
SNPs | Gene Info |
| Hs.524078 | TRAPPC4 | Trafficking protein particle complex 4 | CGAP-C-2455878 CGAP-C-2455879 CGAP-C-2455883 CGAP-C-2455884 |
SNPs | Gene Info |
| Hs.234282 | VPS11 | Vacuolar protein sorting 11 homolog (S. cerevisiae) | CGAP-C-2482807 CGAP-C-2482808 CGAP-C-2482809 CGAP-C-2482810 |
SNPs | Gene Info |
| Hs.534613 | CCDC84 | Coiled-coil domain containing 84 | CGAP-C-2421815 |
SNPs | Gene Info |
| Hs.277704 | HYOU1 | Hypoxia up-regulated 1 | CGAP-C-2388731 CGAP-C-2388735 CGAP-C-2388736 |
SNPs | Gene Info |
| Hs.477879 | H2AFX | H2A histone family, member X | CGAP-C-2485221 CGAP-C-2485222 CGAP-C-2485224 CGAP-C-2485225 CGAP-C-2485231 |
SNPs | Gene Info |
| Hs.512676 | RPS25 | Ribosomal protein S25 | CGAP-C-2444456 CGAP-C-2444457 CGAP-C-2444565 CGAP-C-2444567 CGAP-C-2444568 CGAP-C-2444571 |
SNPs | Gene Info |
| Hs.524081 | DPAGT1 | Dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) | CGAP-C-2471572 |
SNPs | Gene Info |
| Hs.524084 | RNF26 | Ring finger protein 26 | CGAP-C-2398849 |
SNPs | Gene Info |
| Hs.504096 | CBL | Cas-Br-M (murine) ecotropic retroviral transforming sequence | CGAP-C-2399494 |
SNPs | Gene Info |
| Hs.653181 | THY1 | Thy-1 cell surface antigen | CGAP-C-2441210 CGAP-C-2441212 CGAP-C-2441220 CGAP-C-2441221 CGAP-C-2441222 CGAP-C-2441223 |
SNPs | Gene Info |
| Hs.632102 | C1QTNF5 | C1q and tumor necrosis factor related protein 5 | CGAP-C-2389694 CGAP-C-2389695 |
SNPs | Gene Info |
| Hs.599039 | MCAM | Melanoma cell adhesion molecule | CGAP-C-2459597 CGAP-C-2459598 CGAP-C-2459600 |
SNPs | Gene Info |
| Hs.334846 | PVRL1 | Poliovirus receptor-related 1 (herpesvirus entry mediator C) | CGAP-C-2432353 |
SNPs | Gene Info |
| Hs.504115 | TRIM29 | Tripartite motif-containing 29 | CGAP-C-2423685 |
SNPs | Gene Info |
| Hs.24598 | ARHGEF12 | Rho guanine nucleotide exchange factor (GEF) 12 | CGAP-C-2472571 |
SNPs | Gene Info |
| Hs.445081 | OAF | OAF homolog (Drosophila) | CGAP-C-2471471 CGAP-C-2471472 CGAP-C-2471473 CGAP-C-2471475 |
SNPs | Gene Info |
| Hs.687894 | - | Transcribed locus | CGAP-C-2472561 CGAP-C-2472567 |
SNPs | Gene Info |
| Hs.287749 | SC5DL | Sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like | CGAP-C-2464875 CGAP-C-2464881 CGAP-C-2464883 CGAP-C-2464884 |
SNPs | Gene Info |
| Hs.504136 | TBCEL | Tubulin folding cofactor E-like | CGAP-C-2392966 CGAP-C-2392967 |
SNPs | Gene Info |
| Hs.368592 | SORL1 | Sortilin-related receptor, L(DLR class) A repeats-containing | CGAP-C-2416402 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |