BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SGO_1299
(150 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157075811|gb|ABV10494.1| transcriptional regulator MarR ... 236 2e-61
gi|125718200|ref|YP_001035333.1| Multiple antibiotic resist... 166 4e-40
gi|146318262|ref|YP_001197974.1| Transcriptional regulator ... 139 7e-32
gi|81097319|ref|ZP_00875613.1| regulatory protein, MarR [St... 138 1e-31
gi|15675758|ref|NP_269932.1| putative transcriptional regul... 132 6e-30
gi|50915025|ref|YP_060997.1| Transcriptional regulator, Mar... 132 6e-30
gi|71911484|ref|YP_283034.1| transcriptional regulator, Mar... 131 2e-29
gi|18309771|ref|NP_561705.1| probable transcriptional regul... 130 2e-29
gi|22538048|ref|NP_688899.1| transcriptional regulator, Mar... 130 3e-29
gi|110800673|ref|YP_695242.1| transcriptional regulator, Ma... 130 3e-29
gi|26553750|ref|NP_757684.1| transcriptional regulator MarR... 129 6e-29
gi|24378643|ref|NP_720598.1| putative transcriptional regul... 124 1e-27
gi|150017899|ref|YP_001310153.1| transcriptional regulator,... 113 3e-24
gi|23097900|ref|NP_691366.1| transcriptional regulator [Oce... 96 9e-19
gi|152974864|ref|YP_001374381.1| transcriptional regulator,... 93 4e-18
gi|154685749|ref|YP_001420910.1| YkoM [Bacillus amyloliquef... 92 1e-17
gi|16078399|ref|NP_389217.1| hypothetical protein BSU13340 ... 91 2e-17
gi|52079886|ref|YP_078677.1| hypothetical DNA-binding prote... 90 3e-17
gi|89099325|ref|ZP_01172202.1| YkvE [Bacillus sp. NRRL B-14... 90 4e-17
gi|52785287|ref|YP_091116.1| YkvE [Bacillus licheniformis A... 90 4e-17
gi|126649868|ref|ZP_01722104.1| transcriptional regulator, ... 89 6e-17
gi|42780524|ref|NP_977771.1| transcriptional regulator, Mar... 88 2e-16
gi|30261435|ref|NP_843812.1| transcriptional regulator, Mar... 87 2e-16
gi|94985048|ref|YP_604412.1| transcriptional regulator, Mar... 87 3e-16
gi|30019487|ref|NP_831118.1| Transcriptional regulator, Mar... 87 4e-16
gi|154685776|ref|YP_001420937.1| YkvE [Bacillus amyloliquef... 86 5e-16
gi|89204438|ref|ZP_01183015.1| regulatory protein, MarR [Ba... 86 6e-16
gi|75759337|ref|ZP_00739434.1| Transcriptional regulator, M... 86 6e-16
gi|70725554|ref|YP_252468.1| hypothetical protein SH0553 [S... 86 6e-16
gi|149181372|ref|ZP_01859869.1| YkvE [Bacillus sp. SG-1] >g... 86 9e-16
gi|55822056|ref|YP_140497.1| transcriptional regulator, Mar... 82 6e-15
gi|56962512|ref|YP_174238.1| transcriptional regulator, Mar... 82 1e-14
gi|16078431|ref|NP_389250.1| hypothetical protein BSU13670 ... 82 1e-14
gi|52079916|ref|YP_078707.1| hypothetical DNA-binding prote... 81 2e-14
gi|138894516|ref|YP_001124969.1| Transcriptional regulator ... 81 2e-14
gi|67078223|ref|YP_245843.1| transcriptional regulator, Mar... 80 2e-14
gi|95928963|ref|ZP_01311708.1| transcriptional regulator, M... 80 3e-14
gi|56419493|ref|YP_146811.1| transcriptional regulator (Mar... 80 3e-14
gi|126651428|ref|ZP_01723632.1| hypothetical protein BB1490... 79 1e-13
gi|34499360|ref|NP_903575.1| probable transcriptional regul... 77 2e-13
gi|55820167|ref|YP_138609.1| transcriptional regulator, Mar... 77 4e-13
gi|52080398|ref|YP_079189.1| hypothetical DNA-binding prote... 76 6e-13
gi|68055258|ref|ZP_00539405.1| regulatory protein, MarR [Ex... 75 1e-12
gi|30021238|ref|NP_832869.1| Transcriptional regulator, Mar... 75 2e-12
gi|145619589|ref|ZP_01775637.1| transcriptional regulator, ... 74 4e-12
gi|56695517|ref|YP_165865.1| transcriptional regulator, Mar... 73 5e-12
gi|95930973|ref|ZP_01313702.1| transcriptional regulator, M... 73 5e-12
gi|148260318|ref|YP_001234445.1| transcriptional regulator,... 72 8e-12
gi|23098058|ref|NP_691524.1| transcriptional regulator [Oce... 71 2e-11
gi|15925510|ref|NP_373044.1| similar to transcriptional reg... 70 3e-11
gi|82752103|ref|YP_417844.1| transcriptional regulator MarR... 70 3e-11
gi|56698405|ref|YP_168778.1| transcriptional regulator PecS... 70 4e-11
gi|37521391|ref|NP_924768.1| MarR family transcriptional re... 70 5e-11
gi|116623682|ref|YP_825838.1| transcriptional regulator, Ma... 69 1e-10
gi|113949107|ref|ZP_01434760.1| transcriptional regulator, ... 67 4e-10
gi|37522330|ref|NP_925707.1| MarR family transcriptional re... 67 4e-10
gi|29376222|ref|NP_815376.1| transcriptional regulator, Mar... 66 5e-10
gi|114565834|ref|YP_752988.1| transcriptional regulator, Ma... 66 5e-10
gi|134093588|ref|YP_001098663.1| putative transcriptional r... 66 6e-10
gi|152999916|ref|YP_001365597.1| transcriptional regulator,... 66 6e-10
gi|149188040|ref|ZP_01866335.1| putative transcriptional re... 65 8e-10
gi|120599589|ref|YP_964163.1| transcriptional regulator, Ma... 65 9e-10
gi|118756106|ref|ZP_01603888.1| transcriptional regulator, ... 65 9e-10
gi|126173638|ref|YP_001049787.1| transcriptional regulator,... 65 1e-09
gi|51245349|ref|YP_065233.1| similar to transcriptional reg... 65 1e-09
gi|145589704|ref|YP_001156301.1| transcriptional regulator,... 65 1e-09
gi|118072879|ref|ZP_01541065.1| transcriptional regulator, ... 65 1e-09
gi|126174321|ref|YP_001050470.1| transcriptional regulator,... 65 1e-09
gi|86606412|ref|YP_475175.1| transcriptional regulator, Mar... 65 1e-09
gi|73661699|ref|YP_300480.1| putative transcriptional regul... 64 2e-09
gi|150380831|ref|ZP_01919870.1| transcriptional regulator, ... 64 2e-09
gi|120598728|ref|YP_963302.1| transcriptional regulator, Ma... 64 2e-09
gi|124545139|ref|ZP_01704366.1| transcriptional regulator, ... 64 2e-09
gi|17934188|ref|NP_530978.1| transcriptional regulator, Mar... 64 2e-09
gi|86608676|ref|YP_477438.1| transcriptional regulator, Mar... 64 2e-09
gi|90577503|ref|ZP_01233314.1| transcriptional regulator [V... 64 3e-09
gi|116327016|ref|YP_796736.1| Transcriptional regulator [Le... 64 3e-09
gi|90411553|ref|ZP_01219563.1| putative transcriptional reg... 64 3e-09
gi|113951417|ref|ZP_01436979.1| transcriptional regulator, ... 64 3e-09
gi|15887622|ref|NP_353303.1| hypothetical protein AGR_C_466... 64 3e-09
gi|89072873|ref|ZP_01159430.1| Transcriptional regulator [P... 64 4e-09
gi|153000776|ref|YP_001366457.1| transcriptional regulator,... 64 4e-09
gi|149117136|ref|ZP_01843840.1| transcriptional regulator, ... 64 4e-09
gi|99082294|ref|YP_614448.1| transcriptional regulator, Mar... 63 4e-09
gi|54308201|ref|YP_129221.1| putative transcriptional regul... 63 5e-09
gi|126736815|ref|ZP_01752550.1| transcriptional regulator P... 63 5e-09
gi|78358017|ref|YP_389466.1| transcriptional regulator, Mar... 63 6e-09
gi|113866107|ref|YP_724596.1| transcriptional regulator, Ma... 63 6e-09
gi|124515010|gb|EAY56521.1| Transcriptional regulator [Lept... 63 6e-09
gi|119774891|ref|YP_927631.1| transcriptional regulator, Ma... 63 6e-09
gi|24373606|ref|NP_717649.1| transcriptional regulator, Mar... 63 7e-09
gi|89096689|ref|ZP_01169581.1| hypothetical protein B14911_... 62 7e-09
gi|83859920|ref|ZP_00953440.1| hypothetical protein OA2633_... 62 7e-09
gi|106886120|ref|ZP_01353467.1| regulatory protein, MarR [C... 62 1e-08
gi|13472981|ref|NP_104548.1| regulatory protein (MarR-famil... 62 1e-08
gi|73536140|pdb|2A61|A Chain A, The Crystal Structure Of Tr... 62 1e-08
gi|153815514|ref|ZP_01968182.1| hypothetical protein RUMTOR... 62 1e-08
gi|24213222|ref|NP_710703.1| Transcriptional regulator, mar... 62 1e-08
gi|42781524|ref|NP_978771.1| transcriptional regulator, Mar... 62 1e-08
gi|15643473|ref|NP_228519.1| transcriptional regulator, Mar... 62 1e-08
gi|74317046|ref|YP_314786.1| Transcriptional Regulator, Mar... 61 2e-08
gi|113971026|ref|YP_734819.1| transcriptional regulator, Ma... 61 2e-08
gi|33593069|ref|NP_880713.1| putative MarR-family transcrip... 61 2e-08
gi|126730267|ref|ZP_01746078.1| transcriptional regulator, ... 60 3e-08
gi|90578249|ref|ZP_01234060.1| Transcriptional regulator [V... 60 3e-08
gi|86139810|ref|ZP_01058376.1| transcriptional regulator Pe... 60 4e-08
gi|76261654|ref|ZP_00769256.1| regulatory protein, MarR [Ch... 60 4e-08
gi|84703886|ref|ZP_01017714.1| putative transcription regul... 60 4e-08
gi|118045566|ref|ZP_01514226.1| regulatory protein, MarR [C... 60 4e-08
gi|113970442|ref|YP_734235.1| transcriptional regulator, Ma... 60 5e-08
gi|13474530|ref|NP_106099.1| transcriptional regulator [Mes... 60 5e-08
gi|153832345|ref|ZP_01985012.1| transcriptional regulator, ... 59 6e-08
gi|119718073|ref|YP_925038.1| regulatory protein, MarR [Noc... 59 7e-08
gi|54024954|ref|YP_119196.1| putative transcriptional regul... 59 8e-08
gi|114048251|ref|YP_738801.1| transcriptional regulator, Ma... 59 8e-08
gi|28901141|ref|NP_800796.1| putative transcriptional regul... 59 8e-08
gi|156974484|ref|YP_001445391.1| hypothetical protein VIBHA... 59 9e-08
gi|117921300|ref|YP_870492.1| transcriptional regulator, Ma... 59 1e-07
gi|127512970|ref|YP_001094167.1| transcriptional regulator,... 59 1e-07
gi|114563686|ref|YP_751199.1| transcriptional regulator, Ma... 58 1e-07
gi|115423564|emb|CAJ50100.1| MarR-family transcriptional re... 58 1e-07
gi|38505801|ref|NP_942420.1| MarR family transcriptional re... 58 2e-07
gi|153892300|ref|ZP_02013226.1| transcriptional regulator, ... 58 2e-07
gi|78224637|ref|YP_386384.1| transcriptional regulator, Mar... 58 2e-07
gi|116185931|ref|ZP_01475833.1| hypothetical protein VEx2w_... 58 2e-07
gi|127514264|ref|YP_001095461.1| transcriptional regulator,... 58 2e-07
gi|115351633|ref|YP_773472.1| transcriptional regulator, Ma... 58 2e-07
gi|72160815|ref|YP_288472.1| regulatory protein, MarR [Ther... 58 2e-07
gi|84361821|ref|ZP_00986464.1| COG1846: Transcriptional reg... 58 2e-07
gi|118710338|ref|ZP_01562917.1| transcriptional regulator, ... 57 2e-07
gi|27367033|ref|NP_762560.1| Transcriptional regulator [Vib... 57 2e-07
gi|83310584|ref|YP_420848.1| Transcriptional regulator [Mag... 57 2e-07
gi|145619713|ref|ZP_01775759.1| transcriptional regulator, ... 57 2e-07
gi|52143056|ref|YP_083773.1| transcriptional regulator, Mar... 57 3e-07
gi|145299738|ref|YP_001142579.1| transcriptional regulatory... 57 3e-07
gi|49477695|ref|YP_036548.1| transcriptional regulator, Mar... 57 3e-07
gi|73542676|ref|YP_297196.1| regulatory protein, MarR [Rals... 57 4e-07
gi|84353565|ref|ZP_00978491.1| COG1846: Transcriptional reg... 57 4e-07
gi|24373152|ref|NP_717195.1| transcriptional regulator, Mar... 57 4e-07
gi|27378940|ref|NP_770469.1| transcriptional regulatory pro... 57 4e-07
gi|119716374|ref|YP_923339.1| regulatory protein, MarR [Noc... 56 5e-07
gi|126731900|ref|ZP_01747704.1| transcriptional regulatory ... 56 5e-07
gi|153011346|ref|YP_001372560.1| transcriptional regulator,... 56 5e-07
gi|89093132|ref|ZP_01166082.1| probable regulatory protein,... 56 6e-07
gi|149908981|ref|ZP_01897640.1| probable regulatory protein... 56 6e-07
gi|117620679|ref|YP_856077.1| transcriptional regulator, Ma... 56 6e-07
gi|124875575|gb|EAY65565.1| regulatory protein, MarR [Burkh... 56 6e-07
gi|76259688|ref|ZP_00767334.1| regulatory protein, MarR [Ch... 56 6e-07
gi|108761384|ref|YP_629204.1| transcriptional regulator, Ma... 56 6e-07
gi|118047912|ref|ZP_01516537.1| regulatory protein, MarR [C... 56 7e-07
gi|116691663|ref|YP_837196.1| transcriptional regulator, Ma... 56 7e-07
gi|83649290|ref|YP_437725.1| Transcriptional regulator [Hah... 56 7e-07
gi|78066303|ref|YP_369072.1| transcriptional regulator, Mar... 56 7e-07
gi|34496032|ref|NP_900247.1| probable transcriptional regul... 56 7e-07
gi|118615972|ref|YP_904304.1| transcriptional regulatory pr... 56 8e-07
gi|153900267|ref|ZP_02020829.1| transcriptional regulator, ... 55 9e-07
gi|83949480|ref|ZP_00958213.1| putative transcription regul... 55 9e-07
gi|91223877|ref|ZP_01259141.1| transcriptional regulator, M... 55 9e-07
gi|156449290|ref|ZP_02055673.1| transcriptional regulator, ... 55 9e-07
gi|152981973|ref|YP_001352045.1| transcriptional regulator,... 55 1e-06
gi|150021407|ref|YP_001306761.1| transcriptional regulator,... 55 1e-06
gi|149119602|ref|ZP_01846073.1| transcriptional regulator, ... 55 1e-06
gi|21221104|ref|NP_626883.1| MarR-family regulatory protein... 55 1e-06
gi|15964053|ref|NP_384406.1| PUTATIVE TRANSCRIPTION REGULAT... 55 1e-06
gi|41406148|ref|NP_958984.1| hypothetical protein MAP0050c ... 55 1e-06
gi|134295724|ref|YP_001119459.1| transcriptional regulator,... 55 1e-06
gi|156977621|ref|YP_001448527.1| hypothetical protein VIBHA... 55 1e-06
gi|28898537|ref|NP_798142.1| transcriptional regulator, Mar... 55 1e-06
gi|113939473|ref|ZP_01425327.1| regulatory protein, MarR [H... 55 1e-06
gi|17544868|ref|NP_518270.1| PROBABLE TRANSCRIPTION REGULAT... 55 1e-06
gi|33603731|ref|NP_891291.1| MarR-family transcriptional re... 55 1e-06
gi|86147753|ref|ZP_01066061.1| Transcriptional regulator [V... 55 1e-06
gi|33592986|ref|NP_880630.1| MarR-family transcriptional re... 55 1e-06
gi|86355936|ref|YP_467828.1| probable transcriptional regul... 55 1e-06
gi|87121916|ref|ZP_01077801.1| regulatory protein [Marinomo... 55 2e-06
gi|69938897|ref|ZP_00633248.1| regulatory protein, MarR [Pa... 55 2e-06
gi|33596921|ref|NP_884564.1| MarR-family transcriptional re... 55 2e-06
gi|33600756|ref|NP_888316.1| MarR-family transcriptional re... 55 2e-06
gi|111219617|ref|YP_710411.1| Putative MarR-family transcri... 55 2e-06
gi|83745958|ref|ZP_00943014.1| Transcriptional regulator, M... 55 2e-06
gi|52079103|ref|YP_077894.1| probable transcriptional regul... 55 2e-06
gi|145623170|ref|ZP_01779113.1| transcriptional regulator, ... 55 2e-06
gi|118732262|ref|ZP_01580776.1| transcriptional regulator, ... 55 2e-06
gi|21221571|ref|NP_627350.1| MarR-family regulator [Strepto... 54 2e-06
gi|52081341|ref|YP_080132.1| probable transcriptional regul... 54 2e-06
gi|89055996|ref|YP_511447.1| transcriptional regulator, Mar... 54 2e-06
gi|148253920|ref|YP_001238505.1| putative transcriptional r... 54 2e-06
gi|89206182|ref|ZP_01184744.1| regulatory protein, MarR [Ba... 54 2e-06
gi|77963569|ref|ZP_00827378.1| COG1846: Transcriptional reg... 54 2e-06
gi|84385668|ref|ZP_00988699.1| Transcriptional regulator [V... 54 2e-06
gi|148975977|ref|ZP_01812766.1| transcriptional regulator [... 54 2e-06
gi|29830114|ref|NP_824748.1| MarR-family transcriptional re... 54 3e-06
gi|118466014|ref|YP_879357.1| transcriptional regulator, Ma... 54 3e-06
gi|154686975|ref|YP_001422136.1| YsmB [Bacillus amyloliquef... 54 3e-06
gi|150381387|ref|ZP_01920393.1| transcriptional regulator, ... 54 4e-06
gi|107022753|ref|YP_621080.1| transcriptional regulator, Ma... 54 4e-06
gi|46581203|ref|YP_012011.1| transcriptional regulator, Mar... 54 4e-06
gi|110602387|ref|ZP_01390490.1| regulatory protein, MarR [G... 54 4e-06
gi|118590211|ref|ZP_01547614.1| regulatory protein (MarR-fa... 54 4e-06
gi|29831936|ref|NP_826570.1| MarR-family transcriptional re... 54 4e-06
gi|138896234|ref|YP_001126687.1| Transcriptional regulator ... 54 4e-06
gi|120601565|ref|YP_965965.1| transcriptional regulator, Ma... 53 4e-06
gi|78063406|ref|YP_373314.1| transcriptional regulator, Mar... 53 5e-06
gi|126436021|ref|YP_001071712.1| transcriptional regulator,... 53 5e-06
gi|27366768|ref|NP_762295.1| Transcriptional regulator [Vib... 53 5e-06
gi|116250052|ref|YP_765890.1| putative MarR family transcri... 53 5e-06
gi|52079813|ref|YP_078604.1| repressor of ohrA - OhrR [Baci... 53 5e-06
gi|108798646|ref|YP_638843.1| transcriptional regulator, Ma... 53 5e-06
gi|37522065|ref|NP_925442.1| MarR family transcriptional re... 53 5e-06
gi|114571237|ref|YP_757917.1| transcriptional regulator, Ma... 53 6e-06
gi|108800398|ref|YP_640595.1| transcriptional regulator, Ma... 53 6e-06
gi|118712455|ref|ZP_01565025.1| transcriptional regulator, ... 53 6e-06
gi|111219565|ref|YP_710359.1| putative transcription regula... 53 6e-06
gi|83646317|ref|YP_434752.1| Transcriptional regulator [Hah... 53 6e-06
gi|119859776|ref|ZP_01641187.1| transcriptional regulator, ... 53 6e-06
gi|89098911|ref|ZP_01171791.1| hypothetical protein B14911_... 53 6e-06
gi|124514964|gb|EAY56475.1| Transcriptional regulator [Lept... 53 7e-06
gi|117927255|ref|YP_871806.1| transcriptional regulator, Ma... 53 7e-06
gi|56550950|ref|YP_161789.1| MarR family transcriptional re... 52 7e-06
gi|52144492|ref|YP_082336.1| transcriptional regulator, Mar... 52 7e-06
gi|114564795|ref|YP_752309.1| transcriptional regulator, Ma... 52 8e-06
gi|126730582|ref|ZP_01746392.1| transcriptional regulator, ... 52 8e-06
gi|119776698|ref|YP_929438.1| transcriptional regulator, Ma... 52 8e-06
gi|115377439|ref|ZP_01464642.1| MarR family transcriptional... 52 8e-06
gi|148263202|ref|YP_001229908.1| transcriptional regulator,... 52 8e-06
gi|147672127|ref|YP_001215125.1| transcriptional regulator,... 52 8e-06
gi|148557212|ref|YP_001264794.1| transcriptional regulator,... 52 8e-06
gi|147676355|ref|YP_001210570.1| transcriptional regulator ... 52 8e-06
gi|15601708|ref|NP_233339.1| transcriptional regulator, Mar... 52 9e-06
gi|148264744|ref|YP_001231450.1| transcriptional regulator,... 52 9e-06
>gi|157075811|gb|ABV10494.1| transcriptional regulator MarR family [Streptococcus gordonii str.
Challis substr. CH1]
Length = 150
Score = 236 bits (603), Expect = 2e-61, Method: Composition-based stats.
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MAMKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKM 60
MAMKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKM
Sbjct: 1 MAMKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKM 60
Query: 61 RIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQH 120
RIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQH
Sbjct: 61 RIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQH 120
Query: 121 ILCVKDALAILSDEDKETLISILKKYKNLS 150
ILCVKDALAILSDEDKETLISILKKYKNLS
Sbjct: 121 ILCVKDALAILSDEDKETLISILKKYKNLS 150
>gi|125718200|ref|YP_001035333.1| Multiple antibiotic resistance operon transcription repressor
(MarR), putative [Streptococcus sanguinis SK36]
gi|125498117|gb|ABN44783.1| Multiple antibiotic resistance operon transcription repressor
(MarR), putative [Streptococcus sanguinis SK36]
Length = 148
Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats.
Identities = 95/148 (64%), Positives = 119/148 (80%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
MK ++L +E LDLKTMIVF KAERTIR+IE ++ K++ LTPTQFSVLETLYSKG++RI
Sbjct: 1 MKITDDLSKETLLDLKTMIVFHKAERTIRAIEAQIFKKHDLTPTQFSVLETLYSKGELRI 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
QDLID +LATSGNMTVVIKNM RDG I RT DPNDRR++LI L+++G+ IE P HI
Sbjct: 61 QDLIDRILATSGNMTVVIKNMERDGWIVRTCDPNDRRAFLIGLTKQGKAKIEAALPDHIK 120
Query: 123 CVKDALAILSDEDKETLISILKKYKNLS 150
++ AL+IL ++DK+ LI ILK +K LS
Sbjct: 121 NIQQALSILEEDDKQDLIRILKNFKKLS 148
>gi|146318262|ref|YP_001197974.1| Transcriptional regulator [Streptococcus suis 05ZYH33]
gi|146320455|ref|YP_001200166.1| Transcriptional regulator [Streptococcus suis 98HAH33]
gi|145689068|gb|ABP89574.1| Transcriptional regulator [Streptococcus suis 05ZYH33]
gi|145691261|gb|ABP91766.1| Transcriptional regulator [Streptococcus suis 98HAH33]
Length = 149
Score = 139 bits (349), Expect = 7e-32, Method: Composition-based stats.
Identities = 78/146 (53%), Positives = 105/146 (71%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M+T+E+ L ENK L +++VFR+A TI E IK+ LT QF V+E LY+KG +RI
Sbjct: 1 MRTVEQSLNENKHALHSLVVFRRAANTIAKSELETIKKYGLTVCQFGVMEALYNKGNLRI 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
QDLID +L+TSGNMTVVIKNM+RDG I +T D NDRR+ LI L+ G+E IE+I P+H
Sbjct: 61 QDLIDKLLSTSGNMTVVIKNMIRDGYIYKTIDTNDRRASLIALTPLGRETIEKILPEHYD 120
Query: 123 CVKDALAILSDEDKETLISILKKYKN 148
V + ++LS E+++ L ILKK+KN
Sbjct: 121 HVGEIFSVLSSEEQDQLAEILKKFKN 146
>gi|81097319|ref|ZP_00875613.1| regulatory protein, MarR [Streptococcus suis 89/1591]
gi|80976635|gb|EAP40224.1| regulatory protein, MarR [Streptococcus suis 89/1591]
Length = 149
Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats.
Identities = 78/146 (53%), Positives = 105/146 (71%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M+T+E+ L ENK L +++VFR+A TI E IK+ LT QF V+E LY+KG +RI
Sbjct: 1 MRTVEQSLNENKHALHSLVVFRRAANTITKSELETIKKYGLTVCQFGVMEALYNKGNLRI 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
QDLID +L+TSGNMTVVIKNM+RDG I +T D NDRR+ LI L+ G+E IE+I P+H
Sbjct: 61 QDLIDKLLSTSGNMTVVIKNMIRDGYIYKTIDTNDRRASLIALTPLGRETIEKILPEHYD 120
Query: 123 CVKDALAILSDEDKETLISILKKYKN 148
V + ++LS E+++ L ILKK+KN
Sbjct: 121 HVGEIFSVLSSEEQDQLAEILKKFKN 146
>gi|15675758|ref|NP_269932.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes M1 GAS]
gi|19746870|ref|NP_608006.1| putative transcriptional regulator [Streptococcus pyogenes
MGAS8232]
gi|21911222|ref|NP_665490.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes MGAS315]
gi|28896600|ref|NP_802950.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes SSI-1]
gi|56808718|ref|ZP_00366438.1| COG1846: Transcriptional regulators [Streptococcus pyogenes M49
591]
gi|139474446|ref|YP_001129162.1| MarR family regulatory protein [Streptococcus pyogenes str.
Manfredo]
gi|13622980|gb|AAK34653.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes M1 GAS]
gi|19749112|gb|AAL98505.1| putative transcriptional regulator [Streptococcus pyogenes
MGAS8232]
gi|21905435|gb|AAM80293.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes MGAS315]
gi|28811854|dbj|BAC64783.1| putative transcriptional regulator (MarR family) [Streptococcus
pyogenes SSI-1]
gi|134272693|emb|CAM30964.1| MarR family regulatory protein [Streptococcus pyogenes str.
Manfredo]
Length = 142
Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 98/133 (73%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK M+VFRKA+RT+ + + K+ LT TQFSVLE LY+KG MRI LID +LATSGNM
Sbjct: 10 LKAMVVFRKAQRTLDAFGADIFKKADLTATQFSVLEVLYTKGCMRINHLIDSLLATSGNM 69
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
TVV+ NM R+G IS+ D D+R+Y++ L+ KG LIE + P+H+ V++A A+L+++++
Sbjct: 70 TVVLNNMERNGWISKCKDKTDKRAYVVTLTDKGTRLIEAVLPKHVARVEEAFAVLTEKEQ 129
Query: 137 ETLISILKKYKNL 149
LI +LKK+K L
Sbjct: 130 LCLIELLKKFKQL 142
>gi|50915025|ref|YP_060997.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10394]
gi|71904321|ref|YP_281124.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS6180]
gi|94989302|ref|YP_597403.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS9429]
gi|94991248|ref|YP_599348.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10270]
gi|94993191|ref|YP_601290.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS2096]
gi|94995161|ref|YP_603259.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10750]
gi|50904099|gb|AAT87814.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10394]
gi|71803416|gb|AAX72769.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS6180]
gi|94542810|gb|ABF32859.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS9429]
gi|94544756|gb|ABF34804.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10270]
gi|94546699|gb|ABF36746.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS2096]
gi|94548669|gb|ABF38715.1| Transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS10750]
Length = 152
Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 98/133 (73%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK M+VFRKA+RT+ + + K+ LT TQFSVLE LY+KG MRI LID +LATSGNM
Sbjct: 20 LKAMVVFRKAQRTLDAFGADIFKKADLTATQFSVLEVLYTKGCMRINHLIDSLLATSGNM 79
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
TVV+ NM R+G IS+ D D+R+Y++ L+ KG LIE + P+H+ V++A A+L+++++
Sbjct: 80 TVVLNNMERNGWISKCKDKTDKRAYVVTLTDKGTRLIEAVLPKHVARVEEAFAVLTEKEQ 139
Query: 137 ETLISILKKYKNL 149
LI +LKK+K L
Sbjct: 140 LCLIELLKKFKQL 152
>gi|71911484|ref|YP_283034.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS5005]
gi|71854266|gb|AAZ52289.1| transcriptional regulator, MarR family [Streptococcus pyogenes
MGAS5005]
Length = 142
Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats.
Identities = 68/133 (51%), Positives = 98/133 (73%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK M+VFRKA+RT+ + + K+ LT TQFSVL+ LY+KG MRI LID +LATSGNM
Sbjct: 10 LKAMVVFRKAQRTLDAFGADIFKKADLTATQFSVLKVLYTKGCMRINHLIDSLLATSGNM 69
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
TVV+ NM R+G IS+ D D+R+Y++ L+ KG LIE + P+H+ V++A A+L+++++
Sbjct: 70 TVVLNNMERNGWISKCKDKTDKRAYVVTLTDKGTRLIEAVLPKHVARVEEAFAVLTEKEQ 129
Query: 137 ETLISILKKYKNL 149
LI +LKK+K L
Sbjct: 130 LCLIELLKKFKQL 142
>gi|18309771|ref|NP_561705.1| probable transcriptional regulator [Clostridium perfringens str.
13]
gi|18144449|dbj|BAB80495.1| probable transcriptional regulator [Clostridium perfringens str.
13]
Length = 147
Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 111/147 (75%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M +++L++EN+L+L T++VF +AE TI E + IKE+ LT QF VLE LY+KG +RI
Sbjct: 1 MDNIKDLIKENELELSTLVVFTRAEHTIHKKEFQTIKESGLTIAQFGVLEVLYNKGDLRI 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
++I+ +L TSGN+TVVIKN+ +DGL+ + +DP D+RS +I L+ +G+++IE I P HI
Sbjct: 61 CEIIEKILTTSGNITVVIKNLEKDGLVKKNADPEDKRSCIISLTDEGRKVIENILPSHIN 120
Query: 123 CVKDALAILSDEDKETLISILKKYKNL 149
+K+ +L+DE+K TL +ILKK+KN+
Sbjct: 121 NIKNIFEVLTDEEKITLKNILKKFKNV 147
>gi|22538048|ref|NP_688899.1| transcriptional regulator, MarR family [Streptococcus agalactiae
2603V/R]
gi|25011936|ref|NP_736331.1| hypothetical protein gbs1897 [Streptococcus agalactiae NEM316]
gi|76787973|ref|YP_330463.1| transcriptional regulator, MarR family [Streptococcus agalactiae
A909]
gi|76798731|ref|ZP_00780950.1| transcriptional regulator MarR family [Streptococcus agalactiae
18RS21]
gi|77405657|ref|ZP_00782745.1| transcriptional regulator, MarR family [Streptococcus agalactiae
H36B]
gi|77409407|ref|ZP_00786105.1| transcriptional regulator, MarR family [Streptococcus agalactiae
COH1]
gi|77412299|ref|ZP_00788614.1| transcriptional regulator, MarR family [Streptococcus agalactiae
CJB111]
gi|77414678|ref|ZP_00790813.1| transcriptional regulator, MarR family [Streptococcus agalactiae
515]
gi|22534951|gb|AAN00772.1|AE014277_20 transcriptional regulator, MarR family [Streptococcus agalactiae
2603V/R]
gi|24413478|emb|CAD47556.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563030|gb|ABA45614.1| transcriptional regulator, MarR family [Streptococcus agalactiae
A909]
gi|76585910|gb|EAO62449.1| transcriptional regulator MarR family [Streptococcus agalactiae
18RS21]
gi|77159275|gb|EAO70451.1| transcriptional regulator, MarR family [Streptococcus agalactiae
515]
gi|77161646|gb|EAO72642.1| transcriptional regulator, MarR family [Streptococcus agalactiae
CJB111]
gi|77171989|gb|EAO75160.1| transcriptional regulator, MarR family [Streptococcus agalactiae
COH1]
gi|77175730|gb|EAO78511.1| transcriptional regulator, MarR family [Streptococcus agalactiae
H36B]
Length = 141
Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 103/133 (77%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
+K+M+V RKA RTI KE +LTPTQF+VL+ LY+KG M+I +LI++MLATSGNM
Sbjct: 9 VKSMVVMRKAFRTIDGKVSESFKEFELTPTQFAVLDVLYAKGTMKIGELIENMLATSGNM 68
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
TVVIKNM + G + R S PND+R++L+ L+ +G+E+I++ P+HI V+DA ++L++ ++
Sbjct: 69 TVVIKNMEKKGWVLRHSCPNDKRAFLVSLTTEGEEVIKKALPEHIKRVEDAFSVLTETEQ 128
Query: 137 ETLISILKKYKNL 149
E LI++LKK+K L
Sbjct: 129 EDLINLLKKFKTL 141
>gi|110800673|ref|YP_695242.1| transcriptional regulator, MarR family [Clostridium perfringens
ATCC 13124]
gi|110675320|gb|ABG84307.1| transcriptional regulator, MarR family [Clostridium perfringens
ATCC 13124]
Length = 147
Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 111/147 (75%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M +++L++EN+L+L T++VF +AE TI E + IKE+ LT QF VLE LY+KG +RI
Sbjct: 1 MDKIKDLIKENELELSTLVVFTRAEHTIHKKEFQTIKESGLTIAQFGVLEALYNKGDLRI 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
++I+ +L TSGN+TVVIKN+ +DGL+ + +DP D+RS +I L+ +G+++IE I P HI
Sbjct: 61 CEIIEKILTTSGNITVVIKNLEKDGLVKKNADPEDKRSCIISLTDEGRKVIENILPSHIN 120
Query: 123 CVKDALAILSDEDKETLISILKKYKNL 149
+K+ +L+DE+K TL +ILKK+KN+
Sbjct: 121 NIKNIFEVLTDEEKITLKNILKKFKNV 147
>gi|26553750|ref|NP_757684.1| transcriptional regulator MarR family [Mycoplasma penetrans HF-2]
gi|26453757|dbj|BAC44088.1| transcriptional regulator MarR family [Mycoplasma penetrans HF-2]
Length = 169
Score = 129 bits (323), Expect = 6e-29, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 107/147 (72%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
MK +EELL++ L+LKTMIVFRKA + I + E+ V + +T TQF VL+ L +KGK+ +
Sbjct: 22 MKNIEELLKKYSLELKTMIVFRKAGKVISNKEEEVFNKYNVTITQFGVLDLLRAKGKLMV 81
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
QDLI+ + TSGN+T V+ NM ++ LI + +P+D+RS+LI L+ KG++LI+E+ +H+
Sbjct: 82 QDLIEKLFTTSGNITCVLANMEKNDLIKKEVNPDDKRSFLISLTSKGRKLIDELLVEHVE 141
Query: 123 CVKDALAILSDEDKETLISILKKYKNL 149
V D ++L+ EDKE LI I KK+KNL
Sbjct: 142 NVNDIFSVLTTEDKENLIQIFKKFKNL 168
>gi|24378643|ref|NP_720598.1| putative transcriptional regulator (MarR family) [Streptococcus
mutans UA159]
gi|24376502|gb|AAN57904.1|AE014864_2 putative transcriptional regulator (MarR family) [Streptococcus
mutans UA159]
Length = 149
Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 98/133 (73%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
+K M+VFRKA RTI + K N LT TQF+VL+ LY+KG+M I LI +LATSGNM
Sbjct: 17 VKAMVVFRKAMRTIDAQVAPSYKNNGLTQTQFAVLDVLYAKGEMTISRLIASILATSGNM 76
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
TVVIKNM R+G I R+ +P+DRR+ ++ L++ G++LI++ P HI V+ A +++++E++
Sbjct: 77 TVVIKNMERNGWIYRSPNPDDRRASVVGLTEVGKQLIQKALPDHIAMVEAAFSVMTEEEQ 136
Query: 137 ETLISILKKYKNL 149
LI +LKK+K+L
Sbjct: 137 LVLIDLLKKFKSL 149
>gi|150017899|ref|YP_001310153.1| transcriptional regulator, MarR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904364|gb|ABR35197.1| transcriptional regulator, MarR family [Clostridium beijerinckii
NCIMB 8052]
Length = 148
Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/135 (45%), Positives = 95/135 (70%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E N L+LKT+I + +++ E ++IKE LT +QF VLE LY KG +R+ ++++ L
Sbjct: 10 ELNDLNLKTIIALSRCIQSVNKRELKIIKEGGLTYSQFGVLEVLYHKGDLRVSEILEKTL 69
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
+T GNMTVVI N+ +D LI R DP DRR+ LI +S+KG++L+ E+FP+H+ + + +
Sbjct: 70 STGGNMTVVIDNLAKDDLIDRRPDPKDRRASLISISEKGRKLMSELFPKHVDNLNEIFST 129
Query: 131 LSDEDKETLISILKK 145
LS E+K+ LI++LKK
Sbjct: 130 LSVEEKKNLINMLKK 144
>gi|23097900|ref|NP_691366.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
gi|22776124|dbj|BAC12401.1| transcriptional regulator (MarR family) [Oceanobacillus iheyensis
HTE831]
Length = 143
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 49/131 (37%), Positives = 91/131 (69%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
LK +V KA RT+ I ++ IK++ + + F++LE LY KGK I+++ + +L +G
Sbjct: 5 FSLKAFVVIMKASRTLEEITKKDIKKHGMRASDFTILEALYHKGKQTIREISEAVLINTG 64
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
++T VI + +GL++RT+ P+DRR+ IE++ KG+E+++EIFP+H +++ +S+E
Sbjct: 65 SITYVIDKLENNGLLTRTNSPDDRRAVYIEITDKGKEIMDEIFPKHQRVIEELFEGISEE 124
Query: 135 DKETLISILKK 145
+K+T+I +LK+
Sbjct: 125 EKQTVIEVLKQ 135
>gi|152974864|ref|YP_001374381.1| transcriptional regulator, MarR family [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023616|gb|ABS21386.1| transcriptional regulator, MarR family [Bacillus cereus subsp.
cytotoxis NVH 391-98]
Length = 162
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 81/138 (58%)
Query: 8 ELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLID 67
++ EE LK I + +R+I + I+ N L PT+F+VLE LY KG +Q + +
Sbjct: 19 DIREEISQSLKIFIALSRVQRSIMDTTNKYIQGNGLNPTEFAVLELLYHKGSQPLQQIGE 78
Query: 68 HMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDA 127
+L SG++T V+ + + GL+ RT PNDRR EL++ G LI+ IFP H + +
Sbjct: 79 RILIASGSITYVVDKLEKKGLVKRTPCPNDRRVIYAELTEDGTMLIDSIFPNHERLIHQS 138
Query: 128 LAILSDEDKETLISILKK 145
+L+ E+K L+++LKK
Sbjct: 139 FEMLTKEEKAELLTLLKK 156
>gi|154685749|ref|YP_001420910.1| YkoM [Bacillus amyloliquefaciens FZB42]
gi|154351600|gb|ABS73679.1| YkoM [Bacillus amyloliquefaciens FZB42]
Length = 154
Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGKMRIQDLIDHMLATS 73
+++M +++ R +S+ + I+++K PT+F+VLE LY++G ++Q + +L S
Sbjct: 12 MRSMNLYKVFARAFKSVSEHSIRDSKEHGFNPTEFAVLELLYTRGPQKLQQIGSRLLLVS 71
Query: 74 GNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSD 133
GN+T VI + R+G + R DP D+RS L+ KG E +++I+P H L + A + L
Sbjct: 72 GNVTYVIDKLERNGFLVREQDPKDKRSVYAHLTDKGNEYLDKIYPIHSLRIARAFSGLMP 131
Query: 134 EDKETLISILKK 145
E++E LI++LKK
Sbjct: 132 EEQEQLIALLKK 143
>gi|16078399|ref|NP_389217.1| hypothetical protein BSU13340 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2632052|emb|CAA05611.1| YkoM [Bacillus subtilis]
gi|2633688|emb|CAB13191.1| ykoM [Bacillus subtilis subsp. subtilis str. 168]
Length = 154
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 18 KTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
+ M ++R R +S+ + I+++K PT+F+VLE LY++G ++Q + +L SG
Sbjct: 13 RAMNLYRVFARAFKSVSEHSIRDSKEHGFNPTEFAVLELLYTRGPQKLQQIGSRLLLVSG 72
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
N+T VI + R+G + R DP D+RS L+ KG E +++I+P H L + A + LS +
Sbjct: 73 NVTYVIDKLERNGFLVREQDPKDKRSVYAHLTDKGNEYLDKIYPIHALRIARAFSGLSPD 132
Query: 135 DKETLISILKK 145
+++ LI +LKK
Sbjct: 133 EQDQLIVLLKK 143
>gi|52079886|ref|YP_078677.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
gi|52785258|ref|YP_091087.1| YkoM [Bacillus licheniformis ATCC 14580]
gi|52003097|gb|AAU23039.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
gi|52347760|gb|AAU40394.1| YkoM [Bacillus licheniformis DSM 13]
Length = 153
Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 78/124 (62%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
VF +A +++ R KE+ PT+F+VLE LY++G ++Q + +L SGN+T VI
Sbjct: 19 VFARAFKSVSEHSIRDSKEHGFNPTEFAVLELLYTRGAQKLQQIGSRLLLVSGNVTYVID 78
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ ++G I R DP D+RS L++KG+ ++EI+P H L + A + L+ E++E L+
Sbjct: 79 KLEKNGFIKREQDPKDKRSVYANLTEKGKAYLDEIYPIHSLRIARAFSGLTKEEQEQLMV 138
Query: 142 ILKK 145
+LKK
Sbjct: 139 LLKK 142
>gi|89099325|ref|ZP_01172202.1| YkvE [Bacillus sp. NRRL B-14911]
gi|89085934|gb|EAR65058.1| YkvE [Bacillus sp. NRRL B-14911]
Length = 146
Score = 90.1 bits (222), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 79/135 (58%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK IV +A R + ++I+ L PT+F+VLE LY KG +Q + +L
Sbjct: 4 EQVNQSLKLFIVLSRACRAVNENVNKLIQTYGLNPTEFAVLELLYHKGDQPLQQIGGKIL 63
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + G + R + P DRR ++++KG+ IEEIFP H + + ++
Sbjct: 64 LASGSITYVVDKLEEKGYLRRVACPTDRRVTFAQITEKGKAFIEEIFPSHEQFIHELMSE 123
Query: 131 LSDEDKETLISILKK 145
LS+E+K+T I +LKK
Sbjct: 124 LSNEEKQTAIDLLKK 138
>gi|52785287|ref|YP_091116.1| YkvE [Bacillus licheniformis ATCC 14580]
gi|52347789|gb|AAU40423.1| YkvE [Bacillus licheniformis DSM 13]
gi|145902897|gb|AAU23069.2| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
Length = 151
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 52/134 (38%), Positives = 81/134 (60%)
Query: 12 ENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLA 71
E + LK IV +A R+I + I + L PT+F+VLE LY KG +Q + D +L
Sbjct: 5 EQEQSLKLFIVLSRAYRSINDHMNKHIHHHGLNPTEFAVLELLYHKGDQPLQQIGDKILL 64
Query: 72 TSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAIL 131
SG++T V+ + + LI+R + DRR +++ KG EL+E+IFP H + + +++L
Sbjct: 65 ASGSITYVVDKLEQKQLITRRACTTDRRVTYAQITDKGTELLEKIFPGHAEELHNMISVL 124
Query: 132 SDEDKETLISILKK 145
SDE+KE I +LKK
Sbjct: 125 SDEEKEACIEMLKK 138
>gi|126649868|ref|ZP_01722104.1| transcriptional regulator, MarR family protein [Bacillus sp.
B14905]
gi|126593587|gb|EAZ87532.1| transcriptional regulator, MarR family protein [Bacillus sp.
B14905]
Length = 148
Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 84/135 (62%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ K LK IV +A + I ++ ++N L PT+F+VLE LY KG+ +Q + + +L
Sbjct: 4 EDLKQSLKLYIVLSRALKAINETTHQLFQDNGLNPTEFAVLELLYHKGRQPLQQIGNKIL 63
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T VI + + G + R S P+DRR E++ +G+ + E+FP+H + + +++
Sbjct: 64 LASGSITYVIDKLEKRGYLLRVSCPSDRRVTYAEITDEGEAFMGELFPKHEQHLHEIMSV 123
Query: 131 LSDEDKETLISILKK 145
LS E+KE I++LKK
Sbjct: 124 LSSEEKEQAITLLKK 138
>gi|42780524|ref|NP_977771.1| transcriptional regulator, MarR family [Bacillus cereus ATCC 10987]
gi|42736444|gb|AAS40379.1| transcriptional regulator, MarR family [Bacillus cereus ATCC 10987]
Length = 148
Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 76/135 (56%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK I + R++ + I+ N L PT+F+VLE LY KG +Q + + +L
Sbjct: 8 EDISQSLKVFIALSRVHRSVMDTTNKSIQSNGLNPTEFAVLELLYHKGGQPLQQIGERIL 67
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + + GL+ R PNDRR +L++ G+ I IFP H + + +
Sbjct: 68 IASGSITYVVDKLEKKGLVKRIPCPNDRRVIYAQLTESGENFIASIFPGHEQVIHQSFEM 127
Query: 131 LSDEDKETLISILKK 145
L+ E+K+ L+ +LKK
Sbjct: 128 LTKEEKDELLDLLKK 142
>gi|30261435|ref|NP_843812.1| transcriptional regulator, MarR family [Bacillus anthracis str.
Ames]
gi|47526624|ref|YP_017973.1| transcriptional regulator, marr family [Bacillus anthracis str.
'Ames Ancestor']
gi|47566223|ref|ZP_00237251.1| transcriptional regulator, MarR family [Bacillus cereus G9241]
gi|49184270|ref|YP_027522.1| transcriptional regulator, MarR family [Bacillus anthracis str.
Sterne]
gi|49477191|ref|YP_035561.1| transcriptional regulator, MarR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52144000|ref|YP_082827.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|65318705|ref|ZP_00391664.1| COG1846: Transcriptional regulators [Bacillus anthracis str. A2012]
gi|118476906|ref|YP_894057.1| transcriptional regulator, MarR family [Bacillus thuringiensis str.
Al Hakam]
gi|30255289|gb|AAP25298.1| transcriptional regulator, MarR family [Bacillus anthracis str.
Ames]
gi|47501772|gb|AAT30448.1| transcriptional regulator, MarR family [Bacillus anthracis str.
'Ames Ancestor']
gi|47556776|gb|EAL15107.1| transcriptional regulator, MarR family [Bacillus cereus G9241]
gi|49178197|gb|AAT53573.1| transcriptional regulator, MarR family [Bacillus anthracis str.
Sterne]
gi|49328747|gb|AAT59393.1| transcriptional regulator, MarR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977469|gb|AAU19019.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|118416131|gb|ABK84550.1| transcriptional regulator, MarR family [Bacillus thuringiensis str.
Al Hakam]
Length = 148
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 76/135 (56%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK I + R++ + I+ N L PT+F+VLE LY KG +Q + + +L
Sbjct: 8 EDISQSLKVFIALSRVHRSVMDTTNKSIQSNGLNPTEFAVLELLYHKGGQPLQQIGERIL 67
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + + GL+ R PNDRR +L++ G+ I IFP H + + +
Sbjct: 68 IASGSITYVVDKLEKKGLVKRIPCPNDRRVIYAQLTESGETFIASIFPGHEQVIHQSFEM 127
Query: 131 LSDEDKETLISILKK 145
L+ E+K+ L+ +LKK
Sbjct: 128 LTKEEKDELLDLLKK 142
>gi|94985048|ref|YP_604412.1| transcriptional regulator, MarR family [Deinococcus geothermalis
DSM 11300]
gi|94555329|gb|ABF45243.1| transcriptional regulator, MarR family [Deinococcus geothermalis
DSM 11300]
Length = 164
Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 77/143 (53%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M T L E + L I +A + R + ++ LT +QF VLE LY G +
Sbjct: 1 MPTRYTGLPEERAALDAYIKLWRAAHAVEVAANRHLADHGLTVSQFGVLEALYHLGPLSQ 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
+ L D +L +SGN+T+VI N+ R+GL+ R DP DRR + L+ G+ LI + P H+
Sbjct: 61 RQLADKILRSSGNLTMVIDNLERNGLVRRERDPQDRRVMKVFLTGAGEALITRVLPDHVR 120
Query: 123 CVKDALAILSDEDKETLISILKK 145
++D + L+ E+ L ++ +K
Sbjct: 121 GIQDVFSGLTPEELNQLAALTRK 143
>gi|30019487|ref|NP_831118.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
gi|29895031|gb|AAP08319.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
Length = 148
Score = 86.7 bits (213), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 76/135 (56%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK I + R++ + I+ N L PT+F+VLE LY KG +Q + + +L
Sbjct: 8 EDISQSLKVFIALSRVHRSVMDTTNKSIQSNGLNPTEFAVLELLYHKGGQPLQQIGERIL 67
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + + GL+ R PNDRR +L++ G+ I IFP H + + +
Sbjct: 68 IASGSITYVVDKLEKKGLVKRIPCPNDRRVIYAQLTESGENFIASIFPGHEKVIHQSFEM 127
Query: 131 LSDEDKETLISILKK 145
L+ ++K+ L+ +LKK
Sbjct: 128 LTKDEKDELLDLLKK 142
>gi|154685776|ref|YP_001420937.1| YkvE [Bacillus amyloliquefaciens FZB42]
gi|154351627|gb|ABS73706.1| YkvE [Bacillus amyloliquefaciens FZB42]
Length = 148
Score = 86.3 bits (212), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 83/137 (60%)
Query: 9 LLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDH 68
+ ++ + LK IV +A R+I + I ++ L PT+F+VLE LY KG +Q + D
Sbjct: 1 MTDKTENSLKLFIVLSRAYRSINDHMNKHIHKHGLNPTEFAVLELLYHKGNQPLQQIGDK 60
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
+L SG++T V+ + + L+ R + P DRR ++S+KG L+++IFP H +K+ +
Sbjct: 61 ILLASGSITYVVDKLEKKELLIRKASPTDRRVTFAQISEKGIRLLDDIFPDHADEIKEMI 120
Query: 129 AILSDEDKETLISILKK 145
++LSDE+ E +LK+
Sbjct: 121 SVLSDEEIEMCTEMLKR 137
>gi|89204438|ref|ZP_01183015.1| regulatory protein, MarR [Bacillus weihenstephanensis KBAB4]
gi|89157499|gb|EAR77491.1| regulatory protein, MarR [Bacillus weihenstephanensis KBAB4]
Length = 148
Score = 86.3 bits (212), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 76/135 (56%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK I + R++ + I+ N L PT+F+VLE LY KG +Q + + +L
Sbjct: 8 EDISQSLKVFIALSRVHRSVMDTTNKSIQSNGLNPTEFAVLELLYHKGGQPLQQIGERIL 67
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + + GL+ R PNDRR +L++ G+ I IFP H + + +
Sbjct: 68 IASGSITYVVDKLEKKGLVKRIPCPNDRRVIYAQLTESGESFIASIFPGHEQVIYQSFEM 127
Query: 131 LSDEDKETLISILKK 145
L+ ++K+ L+ +LKK
Sbjct: 128 LTKDEKDELLELLKK 142
>gi|75759337|ref|ZP_00739434.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493169|gb|EAO56288.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 148
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 76/135 (56%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E+ LK I + R++ + I+ N L PT+F+VLE LY KG +Q + + +L
Sbjct: 8 EDISQSLKVFIALSRVHRSVMDTTNKSIQSNGLNPTEFAVLELLYHKGGQPLQQIGERIL 67
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
SG++T V+ + + GL+ R PNDRR +L++ G+ I IFP H + + +
Sbjct: 68 IASGSITYVVDKLEKKGLVKRIPCPNDRRVIYAQLTESGENFIASIFPGHEKVIHRSFEM 127
Query: 131 LSDEDKETLISILKK 145
L+ ++K+ L+ +LKK
Sbjct: 128 LTKDEKDELLDLLKK 142
>gi|70725554|ref|YP_252468.1| hypothetical protein SH0553 [Staphylococcus haemolyticus JCSC1435]
gi|68446278|dbj|BAE03862.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 144
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 3/141 (2%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
++ + LK I +A T+ I Q+ +K L T+F+VLE LYSKG IQ + D +
Sbjct: 1 MDRTEHSLKAFIGLNRALDTLEKIVQQDVKNYGLNVTEFAVLELLYSKGPQPIQRIRDRV 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S +++ V+ + G I+R DP D+R Y L+ KGQ+ + +IFPQH ++ A +
Sbjct: 61 LIASSSISYVVSQLEDKGWITRDKDPLDKRVYNATLTDKGQQFMADIFPQHASTLEQAFS 120
Query: 130 ILSDEDKETLISILKKYKNLS 150
+LS+E+ LI+I + +K LS
Sbjct: 121 VLSEEE---LITIQQAFKKLS 138
>gi|149181372|ref|ZP_01859869.1| YkvE [Bacillus sp. SG-1]
gi|148850935|gb|EDL65088.1| YkvE [Bacillus sp. SG-1]
Length = 152
Score = 85.5 bits (210), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 79/129 (61%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK IV +A + I Q I+ N L T+F+VLE LY KG +Q + +L SG++
Sbjct: 14 LKLFIVLSRAYKAINEDVQVFIQNNGLNMTEFAVLELLYHKGDQPLQQIGGKILLASGSI 73
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
T V+ + + GLI R + PNDRR +++++G+E I E+FP+H + +++L +++K
Sbjct: 74 TYVVDKLEKKGLIRRAACPNDRRVTYAQITEEGKEFIGELFPRHEEQIHKLMSVLDNDEK 133
Query: 137 ETLISILKK 145
ET I +LK+
Sbjct: 134 ETAIELLKR 142
>gi|55822056|ref|YP_140497.1| transcriptional regulator, MarR family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55738041|gb|AAV61682.1| transcriptional regulator, MarR family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 109
Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 39 KENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDR 98
KE LTPTQF V++ L +KG+M+I +LID MLATSGNMTVVIKNM + G + R + D+
Sbjct: 9 KEFNLTPTQFGVMDMLNAKGRMKISELIDCMLATSGNMTVVIKNMEKKGWLIRKACQTDK 68
Query: 99 RSYLIELSQKGQELIEEIFPQ 119
R++ I+L+ +G+ +I+ P
Sbjct: 69 RAFEIDLTDEGRRIIQAAIPH 89
>gi|56962512|ref|YP_174238.1| transcriptional regulator, MarR family [Bacillus clausii KSM-K16]
gi|56908750|dbj|BAD63277.1| MarR family transcriptional regulator [Bacillus clausii KSM-K16]
Length = 149
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 74/129 (57%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK V KA +++R IK++ PT+F+VLE LYSKG+ +Q + + +L S ++
Sbjct: 12 LKLFTVMTKALQSVRIKAIADIKKHGFNPTEFAVLELLYSKGEQPVQKIGEKVLIASSSI 71
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
T V+ + + G+I R P DRR + L++KG + + +IFP+H + A L + +K
Sbjct: 72 TYVVDKLEKKGMIVRKPCPTDRRVTFVSLTEKGHDWMADIFPRHAEAIDTIFASLDEAEK 131
Query: 137 ETLISILKK 145
LI LKK
Sbjct: 132 RQLIDQLKK 140
>gi|16078431|ref|NP_389250.1| hypothetical protein BSU13670 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2633738|emb|CAB13240.1| ykvE [Bacillus subtilis subsp. subtilis str. 168]
Length = 145
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 77/129 (59%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK IV +A R+I + I ++ L PT+F+VLE LY KG +Q + D +L SG++
Sbjct: 6 LKLFIVLSRAYRSINDHMNKHIHKHGLNPTEFAVLELLYHKGDQPLQQIGDKILLASGSI 65
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
T V+ + + L+ R + P DRR ++++KG L+ +IFP H + + +++LS+E+
Sbjct: 66 TYVVDKLEQKELLIRKASPTDRRVTFAQITEKGIGLLNDIFPDHAAEIDEMISVLSEEEV 125
Query: 137 ETLISILKK 145
E +LK+
Sbjct: 126 EMCTEMLKR 134
>gi|52079916|ref|YP_078707.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
Length = 125
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 69/108 (63%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
I + L PT+F+VLE LY KG +Q + D +L SG++T V+ + + LI+R + D
Sbjct: 5 IHHHGLNPTEFAVLELLYHKGDQPLQQIGDKILLASGSITYVVDKLEQKQLITRRACTTD 64
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
RR +++ KG EL+E+IFP H + + +++LSDE+KE I +LKK
Sbjct: 65 RRVTYAQITDKGTELLEKIFPGHAEELHNMISVLSDEEKEACIEMLKK 112
>gi|138894516|ref|YP_001124969.1| Transcriptional regulator MarR family [Geobacillus
thermodenitrificans NG80-2]
gi|134266029|gb|ABO66224.1| Transcriptional regulator MarR family [Geobacillus
thermodenitrificans NG80-2]
Length = 162
Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 81/144 (56%)
Query: 2 AMKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMR 61
+ +E+ +E + LK IV +A R + + I + PT+F+VLE LY KG
Sbjct: 6 GLNGMEQKEQELEQSLKLFIVLSRAYRAVSDQVNKSICSCGVNPTEFAVLELLYHKGDQP 65
Query: 62 IQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHI 121
+Q + + +L SG++T V+ + GLI R + DRR ++++G+ IE +FP+H
Sbjct: 66 LQQIGEKILLASGSITYVVDKLENKGLIVRRACERDRRVTYASITEEGRRFIERVFPKHA 125
Query: 122 LCVKDALAILSDEDKETLISILKK 145
+ + ++ L+ E+KE I++LKK
Sbjct: 126 EKIHETISALTAEEKEQAITLLKK 149
>gi|67078223|ref|YP_245843.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|66970529|gb|AAY60505.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
Length = 147
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 11 EENKLDLKTMIVFRKA-ERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
+ L LK ++F +A + IR IE IK L PT+F+VLE L+SKG IQ + D +
Sbjct: 5 DNEDLSLKLFVIFSRAGQSVIRRIEAD-IKSYGLNPTEFAVLELLFSKGDQPIQKIGDKI 63
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L SG++T V+ + L+ R PNDRR ++ +G EL++ IFP+H ++
Sbjct: 64 LLASGSITYVVDKLENKQLLVRRPCPNDRRVTYAAITMEGIELMKVIFPKHKEAIQQVFG 123
Query: 130 ILSDEDKETLISILKK 145
L++E+K +I LKK
Sbjct: 124 GLNNEEKRIMIEQLKK 139
>gi|95928963|ref|ZP_01311708.1| transcriptional regulator, MarR family [Desulfuromonas acetoxidans
DSM 684]
gi|95134864|gb|EAT16518.1| transcriptional regulator, MarR family [Desulfuromonas acetoxidans
DSM 684]
Length = 155
Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 82/144 (56%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M T E+ + L T+I +A ++ + Q L+ +QF VLETLY G M
Sbjct: 1 MPTAYHGTEQEQRALNTLIKMLRAAESVSTFLQSGRVSAGLSISQFGVLETLYHLGPMCQ 60
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
+DL +L +SGN+T VI N+ + L+ R DRR + + L++KG+ LI ++FP+H+
Sbjct: 61 RDLGRKILKSSGNITTVIDNLEKRQLVERRRLETDRRYFQVHLTEKGRTLIAQVFPEHVE 120
Query: 123 CVKDALAILSDEDKETLISILKKY 146
+ + ++LS +++E L + KK+
Sbjct: 121 RIVERFSVLSADEQEQLAMLCKKF 144
>gi|56419493|ref|YP_146811.1| transcriptional regulator (MarR family) [Geobacillus kaustophilus
HTA426]
gi|56379335|dbj|BAD75243.1| transcriptional regulator (MarR family) [Geobacillus kaustophilus
HTA426]
Length = 149
Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRI 62
M+ E+ L+++ LK IV +A R++ + I+ + PT+F+VLE LY KG +
Sbjct: 1 MEQKEQALQQS---LKLFIVLSRAYRSVSDQVNKSIQAFGVNPTEFAVLELLYHKGDQPL 57
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
Q + + +L SG++T VI + G I R + DRR ++ G+ I+ +FP+H
Sbjct: 58 QQIGEKILLASGSITYVIDKLENKGWIIRRACERDRRVTYASITDSGRRFIQRVFPEHAE 117
Query: 123 CVKDALAILSDEDKETLISILKK 145
+ + +A L+ E+KE I++LKK
Sbjct: 118 TIHETVAALTPEEKEQAIALLKK 140
>gi|126651428|ref|ZP_01723632.1| hypothetical protein BB14905_07089 [Bacillus sp. B14905]
gi|126591681|gb|EAZ85777.1| hypothetical protein BB14905_07089 [Bacillus sp. B14905]
Length = 144
Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 80/136 (58%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
++E+ +LK V +A +TI+ +R + + L T+FSVLE LY +G+ IQ + +
Sbjct: 1 MKEDNRNLKAFTVLFRAYQTIQEATKRDLLQFDLNQTEFSVLEFLYHRGEQPIQVIGKRI 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S ++T VI + + G + R S P DRR + L+ +GQ L+EEIFP+H + +
Sbjct: 61 LIASSSITYVIDKLEQKGYVYRKSCPRDRRVTYVLLTNEGQTLMEEIFPKHEQKINEIFQ 120
Query: 130 ILSDEDKETLISILKK 145
+L ++ +T+I LKK
Sbjct: 121 VLGPQELDTMILSLKK 136
>gi|34499360|ref|NP_903575.1| probable transcriptional regulator, MarR family [Chromobacterium
violaceum ATCC 12472]
gi|34105210|gb|AAQ61566.1| probable transcriptional regulator, MarR family [Chromobacterium
violaceum ATCC 12472]
Length = 155
Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 22 VFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTV 78
V R+ RT ++ EQ I+ LTP QF V+ TL + M ++L DH L T G +T
Sbjct: 12 VVRELSRTYQAFEQFASYNIRRLGLTPPQFDVVTTLGNSQGMNCKELSDHTLITKGTLTG 71
Query: 79 VIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDED 135
V+ + G+++R+ PNDRRS + L+ GQ+L + FP H+ + +A ++D
Sbjct: 72 VLDRLEDKGIVTRSMQPNDRRSVFVALTPYGQQLFNDAFPAHLDYMHNAFQQFGEQD 128
>gi|55820167|ref|YP_138609.1| transcriptional regulator, MarR family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736152|gb|AAV59794.1| transcriptional regulator, MarR family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 109
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 39 KENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDR 98
KE L PTQF V++ L +KG+M+I +LID MLATSGNMTVVIKNM + G + R + D+
Sbjct: 9 KEFNLIPTQFGVMDMLNAKGRMKISELIDCMLATSGNMTVVIKNMEKKGWLIRKACQTDK 68
Query: 99 RSYLIELSQKGQELIEEIFPQ 119
R++ I+L+ + + +I+ P
Sbjct: 69 RAFEIDLTDERRRIIQAAIPH 89
>gi|52080398|ref|YP_079189.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
gi|52785777|ref|YP_091606.1| hypothetical protein BLi02022 [Bacillus licheniformis ATCC 14580]
gi|52003609|gb|AAU23551.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC
14580]
gi|52348279|gb|AAU40913.1| putative protein [Bacillus licheniformis DSM 13]
Length = 151
Score = 75.9 bits (185), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/134 (36%), Positives = 74/134 (55%)
Query: 12 ENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLA 71
E +L LK IV +A ++I+ + IK L PT+F+VLE +Y+KG IQ + + +L
Sbjct: 10 EEELSLKAFIVLSRALQSIKKRVEEDIKCLGLNPTEFAVLELIYNKGDQPIQKIGEKVLI 69
Query: 72 TSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAIL 131
S ++T VI + + LI R P DRR L+ +G L+ +FP+H +K L
Sbjct: 70 ASSSITYVIDKLEKKSLIVRRPCPKDRRITYAALTNEGTALMNNLFPKHKAAMKGIFGGL 129
Query: 132 SDEDKETLISILKK 145
++KE LI LKK
Sbjct: 130 DIKEKEVLIEKLKK 143
>gi|68055258|ref|ZP_00539405.1| regulatory protein, MarR [Exiguobacterium sibiricum 255-15]
gi|68008206|gb|EAM87441.1| regulatory protein, MarR [Exiguobacterium sibiricum 255-15]
Length = 144
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 73/136 (53%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
+E+ +LK + V +A + + ++ + ++ L PT FSVLE LY KG+ IQ + +
Sbjct: 1 MEQPNPNLKALTVMVRAVDALHEVIKQDVAKSGLNPTDFSVLELLYHKGRQPIQLIGKKV 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L TSG++T VI + + + R + P DRR EL+ +GQ L++ IFP+H +
Sbjct: 61 LITSGSITYVIDKLEKKNYVVRQACPEDRRVTFAELTTEGQTLMDTIFPEHEQAINQVFQ 120
Query: 130 ILSDEDKETLISILKK 145
+ + E I KK
Sbjct: 121 GIDQAEIELFIKTAKK 136
>gi|30021238|ref|NP_832869.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
gi|29896792|gb|AAP10070.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
Length = 147
Score = 74.7 bits (182), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 75/137 (54%)
Query: 9 LLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDH 68
++ + L LK ++ +A ++I + IK L PT+F+VLE LYSKG IQ + D
Sbjct: 3 VINDESLSLKLFVILSRAVQSITKRIEEDIKSYGLNPTEFAVLELLYSKGDQPIQKIGDK 62
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
+L S ++T V+ + + + R P DRR ++ +G EL++ IFPQH ++ L
Sbjct: 63 ILLASSSITYVVDKLEKKRFLIRKPCPKDRRVTYASITSEGIELMDIIFPQHKEAIRQIL 122
Query: 129 AILSDEDKETLISILKK 145
L DK+ +I LKK
Sbjct: 123 GGLDYIDKKMIIHKLKK 139
>gi|145619589|ref|ZP_01775637.1| transcriptional regulator, MarR family [Geobacter bemidjiensis Bem]
gi|144944160|gb|EDJ79237.1| transcriptional regulator, MarR family [Geobacter bemidjiensis Bem]
Length = 147
Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKGKMRIQDLI 66
+EE K + + + K R S+ RV + E +LT +QF VLE L KG M +D+
Sbjct: 1 MEEKKNSYRALNTYTKLMRASESVTSRVGRKMSEARLTISQFGVLEALLHKGAMCQRDVA 60
Query: 67 DHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKD 126
+L ++GN+T+VI N+ + L+ R DRR Y + L+ KG+ LIE +F + +
Sbjct: 61 AKILKSTGNITLVIDNLEKQELVRRERSLEDRRYYTVVLTDKGRALIEVVFAEVEAAIVS 120
Query: 127 ALAILSDEDKETLISILKK 145
+++L+++++ETL + KK
Sbjct: 121 EMSVLTEQEQETLGELCKK 139
>gi|56695517|ref|YP_165865.1| transcriptional regulator, MarR family [Silicibacter pomeroyi
DSS-3]
gi|56677254|gb|AAV93920.1| transcriptional regulator, MarR family [Silicibacter pomeroyi
DSS-3]
Length = 150
Score = 73.2 bits (178), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 66/111 (59%)
Query: 37 VIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPN 96
V + + LT Q+ LETL +KG + + DL+ L+TSGN+ VVIKN+++ GLI ++ DP
Sbjct: 31 VFRAHGLTAPQWDALETLANKGPVSMNDLMRFTLSTSGNLDVVIKNLIQAGLIEKSVDPE 90
Query: 97 DRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYK 147
D+R +++LS +G+ +++ P H + + L K I+ L + +
Sbjct: 91 DKRGRILQLSPEGRRKVDDFIPIHNQALDQLFSGLGTAGKRQTITALNQLR 141
>gi|95930973|ref|ZP_01313702.1| transcriptional regulator, MarR family [Desulfuromonas acetoxidans
DSM 684]
gi|95132982|gb|EAT14652.1| transcriptional regulator, MarR family [Desulfuromonas acetoxidans
DSM 684]
Length = 138
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 67/116 (57%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
I S EQ V+K++ L+P Q +E + G+MR++++ M T+G +TV++ + G +
Sbjct: 18 ISSWEQTVVKDSGLSPAQMHAVEIVGHHGEMRMKEMAQRMGITTGTLTVMVDRLETLGAL 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R +P DRRSY+I L+ KGQ+L E H L ++ +DE+K L +L +
Sbjct: 78 HRQPNPKDRRSYVIVLTDKGQQLFNEHHKLHELLTREMTTTFNDEEKNMLQQLLTR 133
>gi|148260318|ref|YP_001234445.1| transcriptional regulator, MarR family [Acidiphilium cryptum JF-5]
gi|146401999|gb|ABQ30526.1| transcriptional regulator, MarR family [Acidiphilium cryptum JF-5]
Length = 149
Score = 72.4 bits (176), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
E + ++ + +A + + Q + LT Q VLE L G + +DL +L
Sbjct: 7 EATEAAVRAYVKLMRASHAVLARTQARLAAAGLTHVQLGVLEALLHLGPLTQRDLTRKLL 66
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
+ GN+T VI + R GL+ R P DRRS + L+ G+ IEE+FP+H + A+
Sbjct: 67 TSPGNLTDVIDKLARRGLVERVQCPEDRRSVRVVLTADGRRFIEELFPRHAGDIAAAMGG 126
Query: 131 LSDEDKETLISILKK 145
L +D L ++L++
Sbjct: 127 LDGKDLAALDALLRR 141
>gi|23098058|ref|NP_691524.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
gi|22776283|dbj|BAC12559.1| transcriptional regulator (MarR family) [Oceanobacillus iheyensis
HTE831]
Length = 150
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 78/140 (55%)
Query: 6 LEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDL 65
LE + ++ LK +++ KA +T+ + +K ++ T F+VLE LY +G+ +Q +
Sbjct: 3 LELVTKKQDPSLKLLVILSKAYKTVMEQVELDVKSRGISLTDFAVLELLYHRGQQPLQKI 62
Query: 66 IDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVK 125
D +L TSG++T V+ + + G ++R D+R +S KG EL++ IFP H +K
Sbjct: 63 ADKILLTSGSITYVVNKLEKQGYLTREQCELDKRVTYAVISDKGTELLDSIFPGHWDKIK 122
Query: 126 DALAILSDEDKETLISILKK 145
+ L +KE I +LKK
Sbjct: 123 QIMHGLDYHEKEEAIVLLKK 142
>gi|15925510|ref|NP_373044.1| similar to transcriptional regulator, MarR family [Staphylococcus
aureus subsp. aureus Mu50]
gi|15928099|ref|NP_375632.1| hypothetical protein SA2308 [Staphylococcus aureus subsp. aureus
N315]
gi|21284169|ref|NP_647257.1| hypothetical protein MW2440 [Staphylococcus aureus subsp. aureus
MW2]
gi|49484724|ref|YP_041948.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49487299|ref|YP_044520.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651028|ref|YP_187324.1| transcriptional regulator, MarR family [Staphylococcus aureus
subsp. aureus COL]
gi|87161071|ref|YP_495093.1| transcriptional regulator, MarR family [Staphylococcus aureus
subsp. aureus USA300]
gi|88196460|ref|YP_501285.1| hypothetical protein SAOUHSC_02826 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268953|ref|YP_001247896.1| transcriptional regulator, TrmB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395030|ref|YP_001317705.1| regulatory protein MarR [Staphylococcus aureus subsp. aureus JH1]
gi|151222630|ref|YP_001333452.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980835|ref|YP_001443094.1| hypothetical protein SAHV_2504 [Staphylococcus aureus subsp. aureus
Mu3]
gi|13702470|dbj|BAB43611.1| SA2308 [Staphylococcus aureus subsp. aureus N315]
gi|14248294|dbj|BAB58682.1| similar to transcriptional regulator, MarR family [Staphylococcus
aureus subsp. aureus Mu50]
gi|21205612|dbj|BAB96305.1| MW2440 [Staphylococcus aureus subsp. aureus MW2]
gi|49242853|emb|CAG41580.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245742|emb|CAG44221.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285214|gb|AAW37308.1| transcriptional regulator, MarR family [Staphylococcus aureus
subsp. aureus COL]
gi|87127045|gb|ABD21559.1| transcriptional regulator, MarR family [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87204018|gb|ABD31828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147742022|gb|ABQ50320.1| transcriptional regulator, TrmB [Staphylococcus aureus subsp.
aureus JH9]
gi|149947482|gb|ABR53418.1| regulatory protein MarR [Staphylococcus aureus subsp. aureus JH1]
gi|150375430|dbj|BAF68690.1| MarR family regulatory protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722970|dbj|BAF79387.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 144
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 73/136 (53%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
++ K L + +A T+ I + +K L T+F+VLE LY+KG IQ + D +
Sbjct: 1 MDRTKQSLNVFVGMNRALDTLEQITKEDVKRYGLNITEFAVLELLYNKGPQPIQRIRDRV 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S +++ V+ + G I+R D +D+R Y+ L++KGQ + +IFP+H + A
Sbjct: 61 LIASSSISYVVSQLEDKGWITREKDKDDKRVYMACLTEKGQSQMADIFPKHAETLTKAFD 120
Query: 130 ILSDEDKETLISILKK 145
+L+ ++ L KK
Sbjct: 121 VLTKDELTILQQAFKK 136
>gi|82752103|ref|YP_417844.1| transcriptional regulator MarR family [Staphylococcus aureus RF122]
gi|82657634|emb|CAI82082.1| transcriptional regulator MarR family [Staphylococcus aureus RF122]
Length = 144
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
++ K L + +A T+ I + +K L T+F+VLE LY+KG IQ + D +
Sbjct: 1 MDRTKQSLNVFVGMNRALDTLEQITKEDVKRYGLNITEFAVLELLYNKGPQPIQRIRDRV 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S +++ V+ + G I+R D +D+R Y+ L++KGQ + +IFP H + A
Sbjct: 61 LIASSSISYVVSQLEDKGWITREKDKDDKRVYMACLTEKGQSQMADIFPNHAETLTKAFD 120
Query: 130 ILSDEDKETLISILKK 145
+L+ ++ L KK
Sbjct: 121 VLTKDELTILQQAFKK 136
>gi|56698405|ref|YP_168778.1| transcriptional regulator PecS [Silicibacter pomeroyi DSS-3]
gi|56680142|gb|AAV96808.1| transcriptional regulator PecS [Silicibacter pomeroyi DSS-3]
Length = 169
Score = 70.1 bits (170), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD + M V + R + Q R L P +F VL TL G +
Sbjct: 14 ERPDLDTRAMAVIGRVARLSMAYTQGMQRTFGRYGLNPAKFDVLATLLRSGPPYALSPGA 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+D + SG MT I + +DGL+ R +P D RS +I L+ KGQ LI E+ H+
Sbjct: 74 LLDTTMVASGTMTNRIDRLEQDGLVERRKNPEDSRSVIIALTPKGQALINEMMAAHVATQ 133
Query: 125 KDALAILSDEDKETLISILKKYKN 148
L L+ E++E L ++L K N
Sbjct: 134 SQLLEGLTAEEQEALTTLLAKALN 157
>gi|37521391|ref|NP_924768.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
gi|35212388|dbj|BAC89763.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
Length = 155
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 60/103 (58%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LT +QF VLE L G + L +L + GNMT+VI N+ + GL+ R DRR
Sbjct: 41 LTVSQFGVLEALLHLGPLCQSALAGKLLKSGGNMTLVIDNLEKRGLVERVRSVTDRRYIT 100
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+ L++ G+EL+E + H+ V A+ L+ +++ETL ++ +K
Sbjct: 101 VHLTEAGRELVERLLKPHVQGVVAAMDALTPDEQETLGTLCRK 143
>gi|116623682|ref|YP_825838.1| transcriptional regulator, MarR family [Solibacter usitatus
Ellin6076]
gi|116226844|gb|ABJ85553.1| transcriptional regulator, MarR family [Solibacter usitatus
Ellin6076]
Length = 146
Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 69/125 (55%)
Query: 21 IVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVI 80
+V KA ++ + R I+ L + FSVLE L KG + + + + TSG++TV +
Sbjct: 10 LVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHLTSGSITVAV 69
Query: 81 KNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLI 140
M GL+ R + P+DRR+ ++ L++ G +LI F H ++ A A L+ ++E I
Sbjct: 70 DRMEAKGLVQRCNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGLTLAEREQAI 129
Query: 141 SILKK 145
+LKK
Sbjct: 130 GLLKK 134
>gi|113949107|ref|ZP_01434760.1| transcriptional regulator, MarR family [Shewanella baltica OS195]
gi|149114792|ref|ZP_01841542.1| transcriptional regulator, MarR family [Shewanella baltica OS223]
gi|113908555|gb|EAU27207.1| transcriptional regulator, MarR family [Shewanella baltica OS195]
gi|146865446|gb|EDK50764.1| transcriptional regulator, MarR family [Shewanella baltica OS223]
Length = 191
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVIK---ENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + IE +++ E L +F VL TL G+ + L M
Sbjct: 48 DLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYQSM 107
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI R DRR+ + L+ +G+ LI++ PQHI C LA
Sbjct: 108 MLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQCQSALLA 167
Query: 130 ILSDEDKETLISILKKYKN 148
+S ED+ L+ ILK + N
Sbjct: 168 GVSVEDRPMLLQILKSWLN 186
>gi|37522330|ref|NP_925707.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
gi|35213330|dbj|BAC90702.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
Length = 151
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 26 AERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVR 85
A + + R ++ LTP QF V+ TL + M + L + L T G +T +I +
Sbjct: 26 AYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGMSMNKLGEKTLITKGTLTGIIDRLEE 85
Query: 86 DGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
GL+ R +RRS+ + L+ +G++L E+IFP H+ +K LS+ + L LK
Sbjct: 86 KGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAHVAHLKARFMGLSEAQLDQLFVALKM 145
Query: 146 YKNL 149
+ L
Sbjct: 146 LRTL 149
>gi|29376222|ref|NP_815376.1| transcriptional regulator, MarR family [Enterococcus faecalis V583]
gi|29343685|gb|AAO81446.1| transcriptional regulator, MarR family [Enterococcus faecalis V583]
Length = 142
Score = 66.2 bits (160), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
+ + + LK I + + + ++ + L T+FSVLE L KG IQ + + +
Sbjct: 1 MNQQQEALKAYIGLLRTSHRLEQLAKQDVTCYDLNITEFSVLELLLHKGPQTIQKIKEKI 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S + T VI + + G ++RT DRR +EL++ G+ LIEEIFP H + +A
Sbjct: 61 LIASSSTTYVIDQLHKKGYVTRTPSEKDRRITYVELTEAGKTLIEEIFPTHAKRIAEAFE 120
Query: 130 ILSDEDKETLISILKKYKN 148
LS E+ L L+K N
Sbjct: 121 QLSSEELTLLQKTLRKITN 139
>gi|114565834|ref|YP_752988.1| transcriptional regulator, MarR family [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114336769|gb|ABI67617.1| transcriptional regulator, MarR family [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 138
Score = 66.2 bits (160), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Query: 14 KLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATS 73
+LD V KA++++ + + + + +TP Q+SVL+ L+ ++ L +H+ S
Sbjct: 2 ELDQCLNFVLTKAQQSVHQLFKAELIPHGVTPGQYSVLKCLWKDNGQTVKQLAEHLYLDS 61
Query: 74 GNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV-KDALAILS 132
+T ++ M + GLI +T+DP DRR+ + L++KGQ L EE Q IL K AL ++
Sbjct: 62 STVTGILDRMEQKGLIKKTADPKDRRALQVLLTEKGQAL-EEPLSQAILNANKKALQEMN 120
Query: 133 DEDKETLISILKK 145
D++ E+L +L K
Sbjct: 121 DKEYESLKELLHK 133
>gi|134093588|ref|YP_001098663.1| putative transcriptional regulator, MarR family (partial)
[Herminiimonas arsenicoxydans]
gi|133737491|emb|CAL60534.1| putative transcriptional regulator, MarR family (partial)
[Herminiimonas arsenicoxydans]
Length = 149
Score = 66.2 bits (160), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LTP+QF ++ TL + M +DL + L T G +T VI + GL++R + P DRRS L
Sbjct: 33 LTPSQFDIVATLGNTEGMTFKDLGERTLITKGTLTGVIDRLEEKGLVTRVTHPADRRSTL 92
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK-YKNLS 150
+ L+ KG+ + +F I K + A +++D +TL L K + NL+
Sbjct: 93 VRLTAKGESEFKRVFAPQIAFGKQSFANYAEQDFDTLDRELTKLHANLT 141
>gi|152999916|ref|YP_001365597.1| transcriptional regulator, MarR family [Shewanella baltica OS185]
gi|151364534|gb|ABS07534.1| transcriptional regulator, MarR family [Shewanella baltica OS185]
Length = 198
Score = 66.2 bits (160), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVIK---ENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + IE +++ E L +F VL TL G+ + L M
Sbjct: 55 DLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYQSM 114
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI R DRR+ + L+ +G+ LI++ PQHI C LA
Sbjct: 115 MLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQCQSALLA 174
Query: 130 ILSDEDKETLISILKKYKN 148
+S ED+ L+ ILK + N
Sbjct: 175 GVSVEDRPMLLQILKSWLN 193
>gi|149188040|ref|ZP_01866335.1| putative transcriptional regulator [Vibrio shilonii AK1]
gi|148838028|gb|EDL54970.1| putative transcriptional regulator [Vibrio shilonii AK1]
Length = 138
Score = 65.5 bits (158), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G MR+++L D + T+G +TV + +V L+
Sbjct: 18 MSSWEQSVVKETGYSLAQVHTIEVLGIHGAMRMKELADKLGITTGTLTVQVDKLVAANLM 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R PNDRR+ ++ L+Q+GQE+ H+ VKD + E + LIS L K
Sbjct: 78 ERLPHPNDRRAIVVALTQQGQEIHRHHNQLHLDLVKDLTRHIEPEQEALLISCLTK 133
>gi|120599589|ref|YP_964163.1| transcriptional regulator, MarR family [Shewanella sp. W3-18-1]
gi|146292414|ref|YP_001182838.1| transcriptional regulator, MarR family [Shewanella putrefaciens
CN-32]
gi|120559682|gb|ABM25609.1| transcriptional regulator, MarR family [Shewanella sp. W3-18-1]
gi|145564104|gb|ABP75039.1| transcriptional regulator, MarR family [Shewanella putrefaciens
CN-32]
Length = 192
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVIK---ENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + IE +++ E L +F VL TL G+ + L M
Sbjct: 49 DLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSHLYQSM 108
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI R DRR + L+ +G+ELI++ PQHI C A
Sbjct: 109 MLSSGAMTSRLDRLENKGLIEREHSKEDRRGVHVSLTAEGKELIDKALPQHIQCQSALFA 168
Query: 130 ILSDEDKETLISILKKYKN 148
+S ED+ L+ ILK + N
Sbjct: 169 GVSVEDRPVLLQILKSWLN 187
>gi|118756106|ref|ZP_01603888.1| transcriptional regulator, MarR family [Shewanella pealeana ATCC
700345]
gi|118692306|gb|EAV98540.1| transcriptional regulator, MarR family [Shewanella pealeana ATCC
700345]
Length = 139
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E V+K+ + Q +E L G MR+++L + T+G +TV + MV GL+
Sbjct: 19 LSSWEMAVVKDKGFSLPQVHTVEILGLNGPMRMKELAQKIGITTGTLTVQVDKMVEAGLV 78
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
RT NDRRS L+EL+ G+E+ EE H+ +D A D+++ L+ ++
Sbjct: 79 VRTPHANDRRSILVELTDSGREMFEEHDKLHMQLTQDLTAKFDDKERAQLLDFFER 134
>gi|126173638|ref|YP_001049787.1| transcriptional regulator, MarR family [Shewanella baltica OS155]
gi|125996843|gb|ABN60918.1| transcriptional regulator, MarR family [Shewanella baltica OS155]
Length = 212
Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVIK---ENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + IE +++ E L +F VL TL G+ + L M
Sbjct: 69 DLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYLSM 128
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI R DRR+ + L+ +G+ LI++ PQHI C LA
Sbjct: 129 MLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQCQSALLA 188
Query: 130 ILSDEDKETLISILKKYKN 148
+S ED+ L+ ILK + N
Sbjct: 189 GVSVEDRPMLLQILKSWLN 207
>gi|51245349|ref|YP_065233.1| similar to transcriptional regulators [Desulfotalea psychrophila
LSv54]
gi|50876386|emb|CAG36226.1| related to transcriptional regulators [Desulfotalea psychrophila
LSv54]
Length = 137
Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 66/114 (57%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
I S E V+KE+ L+PTQ +E + +MR+++L + + T+G +TV I + + GL+
Sbjct: 17 ISSWEHSVVKESGLSPTQMHTIEIIGHNQEMRMKELAEKLGITTGTLTVGIDKLEKQGLV 76
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISIL 143
R DRRS+LI L+++G+ + +E H +D A L+ E+ +L +L
Sbjct: 77 QRKPHEKDRRSWLIVLTERGEAMFKEHHRFHQAFTQDICAELTSEEVASLARLL 130
>gi|145589704|ref|YP_001156301.1| transcriptional regulator, MarR family [Polynucleobacter sp.
QLW-P1DMWA-1]
gi|145048110|gb|ABP34737.1| transcriptional regulator, MarR family [Polynucleobacter sp.
QLW-P1DMWA-1]
Length = 137
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 65/112 (58%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
+K LT TQF V+ TL ++ M ++L + L T G +T V++ + G++ R +P D
Sbjct: 25 VKALGLTMTQFDVIATLGNQPPMTCKELGEKTLVTKGTLTGVLERLQTKGILERKINPED 84
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
RS +I L++KGQ+L E++FP+H+ + A LS E + + L KN+
Sbjct: 85 GRSQMIGLTEKGQKLFEKVFPEHLRHLDRAFKNLSAEQLKQVEDSLSLLKNI 136
>gi|118072879|ref|ZP_01541065.1| transcriptional regulator, HxlR family [Shewanella woodyi ATCC
51908]
gi|118022662|gb|EAV36480.1| transcriptional regulator, HxlR family [Shewanella woodyi ATCC
51908]
Length = 139
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 68/116 (58%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+K +++ Q +E L G MR+++L D + T+G +TV I MV+ GL+
Sbjct: 19 LSSWEQAVVKGKEVSLPQVHTVEILGGNGPMRMKELADKIGVTTGTLTVQIDKMVKSGLV 78
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R + D+RS L+EL++KG+E+ EE H + + E++E L++ L++
Sbjct: 79 IRKPNELDKRSILVELTEKGREMFEEHDELHHQLTSELTVKFTQEERELLLNFLER 134
>gi|126174321|ref|YP_001050470.1| transcriptional regulator, MarR family [Shewanella baltica OS155]
gi|125997526|gb|ABN61601.1| transcriptional regulator, MarR family [Shewanella baltica OS155]
Length = 168
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 48 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVEAQWV 107
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
R DRRS L+EL++KGQ L E H+ D A +S E++ L+++L + N
Sbjct: 108 VRRPHETDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNN 166
>gi|86606412|ref|YP_475175.1| transcriptional regulator, MarR family [Synechococcus sp. JA-3-3Ab]
gi|86554954|gb|ABC99912.1| transcriptional regulator, MarR family [Synechococcus sp. JA-3-3Ab]
Length = 151
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
I++ LT QF VL TL + + + L L T G +T ++ + + GL+ R P +
Sbjct: 29 IRQMGLTAPQFDVLVTLGNTPGLTMNVLAQKTLVTKGTLTGIVDRLEQKGLVRREVPPEN 88
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
RR + I L+++G++L E++FP H+ +K+ L E+ + + LKK +++
Sbjct: 89 RRCFKIVLTEEGEKLFEQVFPAHVAYLKERFQKLDPEEMAQIQACLKKLQSI 140
>gi|73661699|ref|YP_300480.1| putative transcriptional regulator [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494214|dbj|BAE17535.1| putative transcriptional regulator [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 143
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 73/136 (53%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
++ ++ L T + + + I + ++ L T+F+V+E LY+KG IQ + + +
Sbjct: 1 MDRTQISLNTFVGLNRTLDHLMKIVKTDVQRYGLNVTEFAVMELLYNKGDQPIQRIGNRV 60
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
L S ++T V+ + G + R + D+R L+ KG+ +++EIFP H ++ +
Sbjct: 61 LIASSSITYVVDKLEEKGCVVRQRNEKDKRVTNASLTDKGRSMMDEIFPDHASTLESTFS 120
Query: 130 ILSDEDKETLISILKK 145
+L+DE+ L + LKK
Sbjct: 121 VLTDEEITVLQTTLKK 136
>gi|150380831|ref|ZP_01919870.1| transcriptional regulator, MarR family [Shewanella sediminis
HAW-EB3]
gi|150254077|gb|EDM91781.1| transcriptional regulator, MarR family [Shewanella sediminis
HAW-EB3]
Length = 139
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 65/116 (56%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+K+ + +E L G MR+++L + + T+G +TV I MV+ L+
Sbjct: 19 LSSWEQAVVKDKGYSLPLVHTVEILGGHGPMRMKELAEKIGVTTGTLTVQIDKMVKLELV 78
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+R +DRRS L+EL+ +G EL EE H+ + A SDE++ +S L++
Sbjct: 79 TRKPHESDRRSILVELTSQGHELYEEHDALHLQLTGELTAKFSDEERAQFLSFLQR 134
>gi|120598728|ref|YP_963302.1| transcriptional regulator, MarR family [Shewanella sp. W3-18-1]
gi|124547239|ref|ZP_01706186.1| transcriptional regulator, MarR family [Shewanella putrefaciens
200]
gi|146293195|ref|YP_001183619.1| transcriptional regulator, MarR family [Shewanella putrefaciens
CN-32]
gi|120558821|gb|ABM24748.1| transcriptional regulator, MarR family [Shewanella sp. W3-18-1]
gi|124509391|gb|EAY53471.1| transcriptional regulator, MarR family [Shewanella putrefaciens
200]
gi|145564885|gb|ABP75820.1| transcriptional regulator, MarR family [Shewanella putrefaciens
CN-32]
Length = 149
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 29 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVEAEWV 88
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
R DRRS L+EL++KGQ L E H+ D A +S E++ L+++L + N
Sbjct: 89 VRRPHETDRRSILVELTEKGQTLFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNN 147
>gi|124545139|ref|ZP_01704366.1| transcriptional regulator, MarR family [Shewanella putrefaciens
200]
gi|124511326|gb|EAY55391.1| transcriptional regulator, MarR family [Shewanella putrefaciens
200]
Length = 192
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVIK---ENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + IE +++ E L +F VL TL G+ + L M
Sbjct: 49 DLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYQSM 108
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI R DRR + L+ +G+ LI++ PQHI C A
Sbjct: 109 MLSSGAMTSRLDRLENKGLIEREHSKEDRRGVHVSLTAEGKALIDKALPQHIQCQSALFA 168
Query: 130 ILSDEDKETLISILKKYKN 148
+S ED+ L+ ILK + N
Sbjct: 169 GVSVEDRPVLLQILKSWLN 187
>gi|17934188|ref|NP_530978.1| transcriptional regulator, MarR family [Agrobacterium tumefaciens
str. C58]
gi|17738603|gb|AAL41294.1| transcriptional regulator, MarR family [Agrobacterium tumefaciens
str. C58]
Length = 161
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 31 RSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDG 87
R +E ++K L+ + F VL TL G ++ DL+ + +SG MT I + + G
Sbjct: 38 REVEAVLLKHG-LSSSAFDVLATLRRAGSPYQLSPGDLLAMTMVSSGTMTNRIDQLEKAG 96
Query: 88 LISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKY 146
L+ R +P DRRS LI L+++G ++EE H+ +A LS+E+++TL +LK++
Sbjct: 97 LVERIHNPQDRRSVLISLTERGFAIVEEAVGAHVDNQHRLVAHLSEEERDTLDGLLKRF 155
>gi|86608676|ref|YP_477438.1| transcriptional regulator, MarR family [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557218|gb|ABD02175.1| transcriptional regulator, MarR family [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 141
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
I++ LT QF VL TL + M + L L T G +T ++ + + GL+ R P +
Sbjct: 29 IRQMGLTAPQFDVLVTLGNTPGMTMNVLAQKTLVTKGTLTGIVDRLEQKGLVRREVPPEN 88
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYK 147
RR + + L++ G++L EEIFP H+ +K+ L + + + LKK +
Sbjct: 89 RRCFKVVLTEAGEKLFEEIFPAHVAYLKERFQKLDPSEMAQIQACLKKLQ 138
>gi|90577503|ref|ZP_01233314.1| transcriptional regulator [Vibrio angustum S14]
gi|90440589|gb|EAS65769.1| transcriptional regulator [Vibrio angustum S14]
Length = 138
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE T Q +E L +G +R+++L D + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYTLAQVHTIEVLGVQGPLRMKELADKLGITTGTLTVQIEKLVKANLI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R + P DRR+ ++ L++ GQ + + H+ V D + E +E LIS ++K
Sbjct: 78 ERCAHPTDRRAIVVTLTEAGQAIHVKHNQLHLDLVNDLTMHIEPEHEEVLISCIEK 133
>gi|116327016|ref|YP_796736.1| Transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116119760|gb|ABJ77803.1| Transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 149
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 62/117 (52%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
L I + +IR +E+++ + LT QF LE+L G M +++ + + GN+
Sbjct: 15 LNAFIKLSRCSDSIRQLEEKIFSKYGLTTGQFGCLESLIHLGPMCQKEIGQKLFSCEGNI 74
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSD 133
T ++ N+ + L+ R DRR +I L+ KG++L+EE FP ++ + LS+
Sbjct: 75 TQIVDNLEKRKLVQRVRSKEDRRYVIIHLTPKGRKLVEEAFPDLLVSLVHKFDSLSE 131
>gi|90411553|ref|ZP_01219563.1| putative transcriptional regulator, MarR family protein
[Photobacterium profundum 3TCK]
gi|90327443|gb|EAS43796.1| putative transcriptional regulator, MarR family protein
[Photobacterium profundum 3TCK]
Length = 138
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 67/116 (57%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V++ + Q ++E L + G MR+++L D + T+G +TV + MV+ LI
Sbjct: 18 LSSWEQSVVRGKGFSLPQVHIVEILGAHGAMRMKELADKIGVTTGTLTVQVDKMVQAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R +DRRS L++L++KG E+ +E H+ +D A L D +++ L+ L K
Sbjct: 78 QRRPHESDRRSILVDLTEKGVEMYQEHDHLHLSLTQDITAQLDDVERKNLLMYLTK 133
>gi|113951417|ref|ZP_01436979.1| transcriptional regulator, MarR family [Shewanella baltica OS195]
gi|113906163|gb|EAU24953.1| transcriptional regulator, MarR family [Shewanella baltica OS195]
Length = 154
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 34 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVEAQWV 93
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
R DRRS L+EL++KGQ L E H+ D A +S E++ L+++L + N
Sbjct: 94 VRRPHETDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNN 152
>gi|15887622|ref|NP_353303.1| hypothetical protein AGR_C_466 [Agrobacterium tumefaciens str. C58]
gi|15155167|gb|AAK86088.1| AGR_C_466p [Agrobacterium tumefaciens str. C58]
Length = 168
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 31 RSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDG 87
R +E ++K L+ + F VL TL G ++ DL+ + +SG MT I + + G
Sbjct: 45 REVEAVLLKHG-LSSSAFDVLATLRRAGSPYQLSPGDLLAMTMVSSGTMTNRIDQLEKAG 103
Query: 88 LISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKY 146
L+ R +P DRRS LI L+++G ++EE H+ +A LS+E+++TL +LK++
Sbjct: 104 LVERIHNPQDRRSVLISLTERGFAIVEEAVGAHVDNQHRLVAHLSEEERDTLDGLLKRF 162
>gi|89072873|ref|ZP_01159430.1| Transcriptional regulator [Photobacterium sp. SKA34]
gi|89051395|gb|EAR56850.1| Transcriptional regulator [Photobacterium sp. SKA34]
Length = 138
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE T Q +E L +G +R+++L D + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYTLAQVHTIEVLGVQGPLRMKELADKLGITTGTLTVQIEKLVKANLI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R + P DRR+ ++ L++ GQ + + H+ V D + E +E LIS ++K
Sbjct: 78 ERCAHPTDRRAIVVTLTEAGQAIHVKHNQLHLDLVNDLTMHIEPEHEEILISCIEK 133
>gi|153000776|ref|YP_001366457.1| transcriptional regulator, MarR family [Shewanella baltica OS185]
gi|151365394|gb|ABS08394.1| transcriptional regulator, MarR family [Shewanella baltica OS185]
Length = 159
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 39 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVEAQWV 98
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
R DRRS L+EL+ KGQ L E H+ D A +S E++ L+++L + N
Sbjct: 99 VRRPHETDRRSILVELTDKGQALFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNN 157
>gi|149117136|ref|ZP_01843840.1| transcriptional regulator, MarR family [Shewanella baltica OS223]
gi|146862812|gb|EDK48426.1| transcriptional regulator, MarR family [Shewanella baltica OS223]
Length = 139
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 19 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVEAQWV 78
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
R DRRS L+EL+ KGQ L E H+ D A +S E++ L+++L + N
Sbjct: 79 VRRPHETDRRSILVELTDKGQALFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNN 137
>gi|99082294|ref|YP_614448.1| transcriptional regulator, MarR family [Silicibacter sp. TM1040]
gi|99038574|gb|ABF65186.1| transcriptional regulator MarR family [Silicibacter sp. TM1040]
Length = 162
Score = 63.2 bits (152), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 43 LTPTQFSVLETLYSKGK---MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRR 99
L +F VL TL G + DL+ + SG MT I + DGL++RT++P+D R
Sbjct: 49 LNGAKFDVLATLRRAGVPHCLSAGDLMKATMVASGTMTNRIDRLEADGLVTRTTNPSDSR 108
Query: 100 SYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
S+LI L+ KG LI+++ H+ L LS D E L +L K
Sbjct: 109 SFLIALTDKGIALIDQVVEAHVATQASLLEGLSTADVENLAQLLSK 154
>gi|54308201|ref|YP_129221.1| putative transcriptional regulator, MarR family [Photobacterium
profundum SS9]
gi|46912629|emb|CAG19419.1| putative transcriptional regulator, MarR family [Photobacterium
profundum SS9]
Length = 138
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 67/116 (57%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V++ + Q ++E L + G MR+++L D + T+G +TV + MV+ LI
Sbjct: 18 LSSWEQSVVRGKGFSLPQIHIVEILGAHGAMRMKELADKIGVTTGTLTVQVDKMVQAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R +DRRS L++L+++G E+ +E H+ +D A L D +++ L+ L K
Sbjct: 78 QRRPHESDRRSILVDLTEQGVEMYQEHDHLHLSLTQDITAKLDDTERKNLLMYLTK 133
>gi|126736815|ref|ZP_01752550.1| transcriptional regulator PecS [Roseobacter sp. SK209-2-6]
gi|126721400|gb|EBA18103.1| transcriptional regulator PecS [Roseobacter sp. SK209-2-6]
Length = 163
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKG---KMRIQD 64
E LD+ +M V + R + + + K L +F VL TL G ++ D
Sbjct: 14 ERPDLDVSSMGVIGRVARLYLAYGEGMQKNFACFGLNAAKFDVLATLRRAGAPYRLSPGD 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ + TSG MT I + DG++ R +P+D RS+LIEL+++G LI+ + H+
Sbjct: 74 LLKATMVTSGTMTNRIARLEADGMVQRFINPDDSRSFLIELTEEGLLLIDRVLEAHVTRQ 133
Query: 125 KDALAILSDEDKETLISILKK 145
+ LA LS E++ +LK+
Sbjct: 134 SEMLAGLSQEERAGFEVLLKR 154
>gi|78358017|ref|YP_389466.1| transcriptional regulator, MarR family [Desulfovibrio desulfuricans
G20]
gi|78220422|gb|ABB39771.1| transcriptional regulator, MarR family [Desulfovibrio desulfuricans
G20]
Length = 138
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 62/114 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E V+++ LT Q LE L MR+++L M T+G +TV++ + GL+
Sbjct: 18 LSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVTTGTLTVLVDRLEERGLV 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISIL 143
R+ DRRS ++EL+ G+ EE HI ++ A LSDEDK+ L+ L
Sbjct: 78 QRSPHMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLSDEDKDALLRCL 131
>gi|113866107|ref|YP_724596.1| transcriptional regulator, MarR-family [Ralstonia eutropha H16]
gi|113524883|emb|CAJ91228.1| transcriptional regulator, MarR-family [Ralstonia eutropha H16]
Length = 151
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVI 80
R T R+IE + E L P +F VL TL G + LI ++ TSG MT +
Sbjct: 9 RLNRHTSRAIEA-ALGETGLQPWEFDVLATLRRAGPPYALSPGALIGSLMITSGTMTNRL 67
Query: 81 KNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLI 140
++ R GL+ R +P DRR L+EL++ G+E ++ H+ LA L+ ++ L
Sbjct: 68 DHLERAGLVRRQPNPEDRRGLLVELTETGRERVDRALELHVANEHRLLADLTATERAQLA 127
Query: 141 SILKKY 146
++L+++
Sbjct: 128 ALLRRW 133
>gi|124515010|gb|EAY56521.1| Transcriptional regulator [Leptospirillum sp. Group II UBA]
Length = 160
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LT QF V+ TL M ++L + L T G +T V+ + + GLI TS P+DRR +
Sbjct: 43 LTGGQFDVIATLGDTDGMCCRELSEKTLVTKGTLTGVLDRLEKKGLIYGTSSPSDRRIRI 102
Query: 103 IELSQKGQELIEEIFPQHILCVKDALA-ILSDEDKETLISILKKYKN 148
I L+ KG+ L ++FP+H+ +K L+DE+ +TL +L K ++
Sbjct: 103 IRLTNKGEALFRKVFPEHLDHLKPFFQRALTDEEMKTLKELLLKVRD 149
>gi|119774891|ref|YP_927631.1| transcriptional regulator, MarR family [Shewanella amazonensis
SB2B]
gi|119767391|gb|ABL99961.1| transcriptional regulator, MarR family [Shewanella amazonensis
SB2B]
Length = 142
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 34 EQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTS 93
E ++++ + L LE L G MR+ DL + ++G +T I M ++GL++R +
Sbjct: 22 EHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSISTGTLTARIDRMEKEGLVTRIA 81
Query: 94 DPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+P DRRS LI L+++G H+ +D +A S EDK+ L+ +L+K
Sbjct: 82 NPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFSPEDKQNLLGMLEK 133
>gi|24373606|ref|NP_717649.1| transcriptional regulator, MarR family [Shewanella oneidensis MR-1]
gi|24347937|gb|AAN55093.1|AE015646_8 transcriptional regulator, MarR family [Shewanella oneidensis MR-1]
Length = 153
Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 33 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVESQWV 92
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R DRRS L+EL++KGQ L E H+ D A +S E++ L+++L +
Sbjct: 93 MRRPHETDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSAEERSLLLNLLTR 148
>gi|89096689|ref|ZP_01169581.1| hypothetical protein B14911_13652 [Bacillus sp. NRRL B-14911]
gi|89088704|gb|EAR67813.1| hypothetical protein B14911_13652 [Bacillus sp. NRRL B-14911]
Length = 141
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
LK + V +A + I+ ++ L PT+FSVLE LY KG IQ + +L +S ++
Sbjct: 5 LKAVTVILRASQAIQEAIRKDAANYDLNPTEFSVLELLYHKGDQPIQMIGRKVLISSSSI 64
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
T V+ + + + R P DRR L+ +G+ L++ +FP+H + + LS ++
Sbjct: 65 TYVVDKLEQKNYVRRQGCPEDRRVIYAVLTAEGKALMDHVFPRHESKMGEVFDELSADEV 124
Query: 137 ETLISILKK 145
I ++KK
Sbjct: 125 NQTIDLMKK 133
>gi|83859920|ref|ZP_00953440.1| hypothetical protein OA2633_07964 [Oceanicaulis alexandrii
HTCC2633]
gi|83852279|gb|EAP90133.1| hypothetical protein OA2633_07964 [Oceanicaulis alexandrii
HTCC2633]
Length = 167
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD+ M VF + +R ++ RV EN LT F VL TL G + D
Sbjct: 15 ERPDLDVGPMGVFGRLKRLADHLQAEIGRVYAENGLTFAAFDVLATLRRAGPPYALSPSD 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L++ + TSG MT I + GLI+R +P D RS ++ L+ +G LI+ + H+
Sbjct: 75 LVNWTMVTSGTMTNRIDRLEEQGLIARRPNPEDGRSNVVALTDQGFALIDRVIDAHVANQ 134
Query: 125 KDALAILSDEDKETLISILKKY 146
+A L ++ ++ L L+ +
Sbjct: 135 HRLIAQLPEDLRDGLEDGLRAW 156
>gi|106886120|ref|ZP_01353467.1| regulatory protein, MarR [Clostridium phytofermentans ISDg]
gi|106766368|gb|EAT23100.1| regulatory protein, MarR [Clostridium phytofermentans ISDg]
Length = 141
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 69/127 (54%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
L+LK +I + T+ S ++ ++E L ++F VLE L KG+ +Q + + +L TSG
Sbjct: 4 LNLKLVIATARCYNTVFSRIEKNVQEYGLNISEFGVLEMLLHKGEQPVQKIAEKILVTSG 63
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
+T V+ + + LI R D+R + I L+ KG+ELI + F +H + + L D
Sbjct: 64 TITYVLDKLQKKDLIYRKKCDKDKRIFYISLTPKGEELISDAFTKHKKFLDELFQGLDDN 123
Query: 135 DKETLIS 141
K +++
Sbjct: 124 IKNDIVN 130
>gi|13472981|ref|NP_104548.1| regulatory protein (MarR-family) [Mesorhizobium loti MAFF303099]
gi|14023729|dbj|BAB50334.1| regulatory protein (MarR-family) [Mesorhizobium loti MAFF303099]
Length = 164
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 43 LTPTQFSVLETLYSKGK---MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRR 99
L +F VL TL G + DL + + TSG MT + + + GLI R PNDRR
Sbjct: 53 LQAGEFDVLATLRRSGSPYALTPTDLYEATMVTSGAMTNRLDRLEKAGLILRGPHPNDRR 112
Query: 100 SYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+++L+ KG LI+E H+ + LA L+D ++ETL +L+K
Sbjct: 113 GIVVQLTGKGLALIDEALTAHVANEHEILAGLNDAERETLSRLLEK 158
>gi|73536140|pdb|2A61|A Chain A, The Crystal Structure Of Transcriptional Regulator Tm0710
From Thermotoga Maritima
gi|73536141|pdb|2A61|B Chain B, The Crystal Structure Of Transcriptional Regulator Tm0710
From Thermotoga Maritima
gi|73536142|pdb|2A61|C Chain C, The Crystal Structure Of Transcriptional Regulator Tm0710
From Thermotoga Maritima
gi|73536143|pdb|2A61|D Chain D, The Crystal Structure Of Transcriptional Regulator Tm0710
From Thermotoga Maritima
Length = 145
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 67/115 (58%)
Query: 35 QRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSD 94
++V+++ +TP QF +L+ +Y +G R +L + +T ++K + DG ++RT D
Sbjct: 23 RKVLRDFGITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPD 82
Query: 95 PNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
P DRR+Y + +++KG+E+IE++ + ++ + L E ++ LK+ K +
Sbjct: 83 PADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLGKEKSSKILDYLKELKGV 137
>gi|153815514|ref|ZP_01968182.1| hypothetical protein RUMTOR_01749 [Ruminococcus torques ATCC 27756]
gi|145847156|gb|EDK24074.1| hypothetical protein RUMTOR_01749 [Ruminococcus torques ATCC 27756]
Length = 134
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 67/115 (58%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
+K +I + + ++ E LT +QF VLE LYSKG M + ++ + +L++ G +
Sbjct: 1 MKILIGLHRNVNALDKKTSKIAAEYNLTFSQFMVLEALYSKGDMSVGEVRERILSSVGTI 60
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAIL 131
+++ N+V+ + R + DRR ++ L+Q+G ++I +I P++ + +++ +L
Sbjct: 61 PLIVNNLVKMNYVERMCNEKDRRVCILHLTQEGYDVISKIVPRNEAMIAESMEVL 115
>gi|24213222|ref|NP_710703.1| Transcriptional regulator, marR family [Leptospira interrogans
serovar Lai str. 56601]
gi|45658865|ref|YP_002951.1| transcriptional regulator (MarR family) [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|24193945|gb|AAN47721.1|AE011238_4 Transcriptional regulator, marR family [Leptospira interrogans
serovar Lai str. 56601]
gi|45602110|gb|AAS71588.1| transcriptional regulator (MarR family) [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 149
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
L I + +IR +E++V + LT QF LETL G M +++ + + GN+
Sbjct: 15 LNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQKEIGQKLFSCEGNI 74
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
T ++ N+ + L+ R DRR +I L+ +G++LI++ FP
Sbjct: 75 TQIVDNLEKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFP 116
>gi|42781524|ref|NP_978771.1| transcriptional regulator, MarR family, putative [Bacillus cereus
ATCC 10987]
gi|42737447|gb|AAS41379.1| transcriptional regulator, MarR family, putative [Bacillus cereus
ATCC 10987]
Length = 138
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 65/112 (58%)
Query: 36 RVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDP 95
+ I++ ++ QF V++ L GK+ + LI++M NMT +I+ M RDG + +P
Sbjct: 23 KAIEQYDISYVQFGVIQVLAKSGKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNP 82
Query: 96 NDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYK 147
ND+R L+ L++KG+E +++ Q+ +K+ + E++ L +L K+K
Sbjct: 83 NDQRETLVYLTKKGEETKKQVDVQYSDFLKENCGCFTKEEEGILEDLLLKWK 134
>gi|15643473|ref|NP_228519.1| transcriptional regulator, MarR family [Thermotoga maritima MSB8]
gi|148269365|ref|YP_001243825.1| transcriptional regulator, MarR family [Thermotoga petrophila
RKU-1]
gi|4981234|gb|AAD35792.1|AE001742_7 transcriptional regulator, MarR family [Thermotoga maritima MSB8]
gi|147734909|gb|ABQ46249.1| transcriptional regulator, MarR family [Thermotoga petrophila
RKU-1]
Length = 143
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 67/115 (58%)
Query: 35 QRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSD 94
++V+++ +TP QF +L+ +Y +G R +L + +T ++K + DG ++RT D
Sbjct: 21 RKVLRDFGITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPD 80
Query: 95 PNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
P DRR+Y + +++KG+E+IE++ + ++ + L E ++ LK+ K +
Sbjct: 81 PADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLGKEKSSKILDYLKELKGV 135
>gi|74317046|ref|YP_314786.1| Transcriptional Regulator, MarR family [Thiobacillus denitrificans
ATCC 25259]
gi|74056541|gb|AAZ96981.1| Transcriptional Regulator, MarR family [Thiobacillus denitrificans
ATCC 25259]
Length = 146
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
I+ LTP QF ++ TL + M +L + L T G +T ++ +V G + R + +D
Sbjct: 29 IRAAGLTPPQFDIVATLGNTAGMTATELGEKTLITKGTLTGIVDRLVARGWVERAAHDSD 88
Query: 98 RRSYLIELSQKGQELIEEIFPQHI 121
RR +I L+Q G+ L +FP H+
Sbjct: 89 RRCQIIRLTQAGERLFSTVFPAHM 112
>gi|113971026|ref|YP_734819.1| transcriptional regulator, MarR family [Shewanella sp. MR-4]
gi|113885710|gb|ABI39762.1| transcriptional regulator, MarR family [Shewanella sp. MR-4]
Length = 178
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + +E + E L +F VL TL G+ + L M
Sbjct: 36 DLVPMAVLGRIARLTKYMENAIALCHGEFGLGQGEFDVLATLRRSGEPYMLSPSQLYQSM 95
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI+R DRR+ + L+ +G+ LI+ P+HI C LA
Sbjct: 96 MLSSGAMTSRLDRLENKGLIAREHSKEDRRAVHVSLTTEGKALIDAALPKHIQCQSALLA 155
Query: 130 ILSDEDKETLISILKKY 146
+ ++ETL ILK +
Sbjct: 156 GVPSAERETLQQILKTW 172
>gi|33593069|ref|NP_880713.1| putative MarR-family transcriptional regulator [Bordetella
pertussis Tohama I]
gi|33596365|ref|NP_884008.1| putative MarR-family transcriptional regulator [Bordetella
parapertussis 12822]
gi|33602349|ref|NP_889909.1| putative MarR-family transcriptional regulator [Bordetella
bronchiseptica RB50]
gi|33563444|emb|CAE42325.1| putative MarR-family transcriptional regulator [Bordetella
pertussis Tohama I]
gi|33566134|emb|CAE37034.1| putative MarR-family transcriptional regulator [Bordetella
parapertussis]
gi|33576788|emb|CAE33867.1| putative MarR-family transcriptional regulator [Bordetella
bronchiseptica RB50]
Length = 170
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 11 EENKLDLKTMIV----FRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGK---MRIQ 63
E LD+ +M V FR +R IE + + L QF +L TLY G + Q
Sbjct: 15 ERPDLDVSSMAVLARIFRFNTAALRRIEP-LFRAAGLHQGQFDLLATLYRAGAPHALSPQ 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L +L +SG MT + + + GLI+R+ +P+DRR ++ L+ G I +I ++
Sbjct: 74 QLTAALLLSSGAMTHRLDQLEQGGLIARSPNPDDRRGVIVSLTPAGLRTIRQILADYLEA 133
Query: 124 VKDALAILSDEDKETLISILKK 145
+ L LS ++ L +LK+
Sbjct: 134 IDALLTPLSATERRQLAGLLKR 155
>gi|126730267|ref|ZP_01746078.1| transcriptional regulator, MarR family protein [Sagittula stellata
E-37]
gi|126709000|gb|EBA08055.1| transcriptional regulator, MarR family protein [Sagittula stellata
E-37]
Length = 169
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD+ M+ + R R + Q V + L F VL TL G + +
Sbjct: 14 ERPDLDVGPMVTIGRMSRLARQLRQSHEEVFARHGLNAAGFDVLATLRRSGPPHALTPKA 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ + TSG MT + + GL+ RT DP D R +I L++KG +I+ H+
Sbjct: 74 LLASTMVTSGTMTNRLDRLAAQGLVERTPDPADGRGTVIRLTEKGHTVIDAAVGDHVANQ 133
Query: 125 KDALAILSDEDKETLISILKKY 146
LA L +D+ L I ++
Sbjct: 134 HRLLAHLGADDRAALDRIFTRW 155
>gi|90578249|ref|ZP_01234060.1| Transcriptional regulator [Vibrio angustum S14]
gi|90441335|gb|EAS66515.1| Transcriptional regulator [Vibrio angustum S14]
Length = 161
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKGK-MRIQDLIDHML 70
LD M V + R R +++++ K N L+ +F +L TL + M +L ++
Sbjct: 20 LDCSPMGVIGRLSRMSRIVDKKLNKTFKNNNLSAVEFDILATLRRFNEPMTPTELYQTLM 79
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
+SG M+ I+ +V+ LI R + P DRRS + L+++G+ LI+ + H + K L
Sbjct: 80 LSSGAMSTRIEQLVKRELIERIASPEDRRSCSVVLTKEGKILIDRVVEMHTINEKAILDP 139
Query: 131 LSDEDKETLISILKKY 146
LSDE +E L S+L+ +
Sbjct: 140 LSDEQREQLASLLRAW 155
>gi|86139810|ref|ZP_01058376.1| transcriptional regulator PecS [Roseobacter sp. MED193]
gi|85823439|gb|EAQ43648.1| transcriptional regulator PecS [Roseobacter sp. MED193]
Length = 164
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIE---QRVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E L++ M + + R + + Q+ L +F VL TL G ++ +
Sbjct: 14 ERPDLNVSAMGIIGRVARLYMAYQEGMQQTFARFGLNAAKFDVLATLRRAGAPYQLSPGE 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ + SG MT I + DGL+ R +P D RS+LIELS G +LI+++ H++
Sbjct: 74 LLKATMVASGTMTNRIARLEADGLVLRQLNPEDSRSFLIELSPAGLDLIDQVVEDHVVTQ 133
Query: 125 KDALAILSDEDKETLISILKK 145
+ LA + +E++ ++L +
Sbjct: 134 ERMLAAMPEEERRAFKTLLSR 154
>gi|76261654|ref|ZP_00769256.1| regulatory protein, MarR [Chloroflexus aurantiacus J-10-fl]
gi|76163465|gb|EAO57643.1| regulatory protein, MarR [Chloroflexus aurantiacus J-10-fl]
Length = 154
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+F K R + + + + L+ Q+++L +G + + + + MLA + N+T ++
Sbjct: 17 LFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEG-VPLSYICNEMLADNSNLTRLVD 75
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDED 135
+ R GL+ R +DP DRR L++L+ G+ LI+E+ P+H V+ L+ LS+E+
Sbjct: 76 RLERRGLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSEEE 129
>gi|84703886|ref|ZP_01017714.1| putative transcription regulator protein [Parvularcula bermudensis
HTCC2503]
gi|84690320|gb|EAQ16161.1| putative transcription regulator protein [Parvularcula bermudensis
HTCC2503]
Length = 161
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 43 LTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRR 99
L+ F VL TL G + L+ M+ TSG MT I +V+DGL++R +P+D+R
Sbjct: 49 LSAASFDVLATLLRSGPPHSLSPNQLLSTMMVTSGTMTNRIDQLVKDGLVARIPNPDDKR 108
Query: 100 SYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
S ++L++ G + I+ H++ + + LS D+ TL IL K
Sbjct: 109 SVHVQLTEDGIKKIDAAVTDHVIVQRRLVEGLSQADQATLNRILDK 154
>gi|118045566|ref|ZP_01514226.1| regulatory protein, MarR [Chloroflexus aggregans DSM 9485]
gi|117998042|gb|EAV12224.1| regulatory protein, MarR [Chloroflexus aggregans DSM 9485]
Length = 156
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+F K R + + + + L+ Q+++L +G + + + + MLA + N+T ++
Sbjct: 17 LFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEG-VPLSYICNEMLADNSNLTRLVD 75
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDED 135
+ R GL+ R +DP DRR L++L+ G+ LI+E+ P+H V+ L+ LS E+
Sbjct: 76 RLERRGLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSPEE 129
>gi|113970442|ref|YP_734235.1| transcriptional regulator, MarR family [Shewanella sp. MR-4]
gi|114047365|ref|YP_737915.1| transcriptional regulator, MarR family [Shewanella sp. MR-7]
gi|117920673|ref|YP_869865.1| transcriptional regulator, MarR family [Shewanella sp. ANA-3]
gi|113885126|gb|ABI39178.1| transcriptional regulator, MarR family [Shewanella sp. MR-4]
gi|113888807|gb|ABI42858.1| transcriptional regulator, MarR family [Shewanella sp. MR-7]
gi|117613005|gb|ABK48459.1| transcriptional regulator, MarR family [Shewanella sp. ANA-3]
Length = 153
Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E ++++ + +Q +E L G MR+++L D + T+G +TV I MV +
Sbjct: 33 LSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDKMVESQWV 92
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
R +DRRS L+EL++KGQ L E H+ D A +S E++
Sbjct: 93 MRRPHESDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSAEER 139
>gi|13474530|ref|NP_106099.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
gi|14025284|dbj|BAB51885.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
Length = 156
Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 26 AERTIRS-IEQRVIKENKLTPTQFSVLETLYSKGK-MRIQDLIDHMLATSGNMTVVIKNM 83
A RTI + + +R+ KE T +F V+ LY + M + DL +L ++GN+T ++ +
Sbjct: 26 ASRTIEAELRERLKKEFDTTLPRFDVMAALYRVPEGMLMSDLSRFLLVSNGNVTGIVDRL 85
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISIL 143
V +GL++R DRR+ ++ L+++G + I H + + L +S+ED L +L
Sbjct: 86 VSEGLVARARRNGDRRTSMVRLTEEGTKSFATIAAAHEGWIGELLGKVSEEDARRLTGML 145
Query: 144 KKYKN 148
+++
Sbjct: 146 TSFRS 150
>gi|153832345|ref|ZP_01985012.1| transcriptional regulator, MarR family [Vibrio harveyi HY01]
gi|148871374|gb|EDL70237.1| transcriptional regulator, MarR family [Vibrio harveyi HY01]
Length = 160
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK---MRIQD 64
E+ +LD + M + + R + +E V + +K L +F VL TL GK + +
Sbjct: 14 EKPELDTEPMAIMGRLMRIAKHMENHVAELHKRYDLKMGEFDVLATLRRSGKPYRLTPSE 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI M+ TSG MT + + + GLI+R DRRS +EL+ KG ELI+ + QH+
Sbjct: 74 LISSMMLTSGAMTNRLDKLEKKGLIAREHSKEDRRSVTVELTTKGFELIDSLIEQHLQAQ 133
Query: 125 KDALAILSDEDKETLISILK 144
+ + LS +K + LK
Sbjct: 134 HELMGSLSSAEKGQVNQALK 153
>gi|119718073|ref|YP_925038.1| regulatory protein, MarR [Nocardioides sp. JS614]
gi|119538734|gb|ABL83351.1| regulatory protein, MarR [Nocardioides sp. JS614]
Length = 162
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIE---QRVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LDL + VF + R R ++ + ++ P +F VL L G ++
Sbjct: 15 ERPDLDLAPVEVFSRISRLSRQLDLARRDAFTAARVEPWEFDVLAALRRAGTPYELSPGR 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ L TSG MT + + GL+ R DP+DRR L+ L+ +G+ ++E F +
Sbjct: 75 LLRETLVTSGTMTNRVDRLAARGLVERLPDPHDRRGVLVRLTPEGRAAVDEAFEALLAAE 134
Query: 125 KDALAILSDEDKETLISILK 144
+ L L++ D+ L +L+
Sbjct: 135 RTFLTALAERDRTRLAGLLR 154
>gi|54024954|ref|YP_119196.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54016462|dbj|BAD57832.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length = 165
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 40 ENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRR 99
E L P VL TL +KG R DL + + ++ + ++V G +SRT+DP+D R
Sbjct: 31 EGALLPGAIGVLSTLETKGSCRQGDLAVSICISPSALSRHVTDLVAAGYVSRTADPSDGR 90
Query: 100 SYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
+ LIE++ G+ L+E I ++ L+ S+E+ E + ++K +N
Sbjct: 91 ATLIEVTDAGRALLERIRVSRAEGLQSVLSDWSEEEAERACTAVRKLRN 139
>gi|114048251|ref|YP_738801.1| transcriptional regulator, MarR family [Shewanella sp. MR-7]
gi|113889693|gb|ABI43744.1| transcriptional regulator, MarR family [Shewanella sp. MR-7]
Length = 178
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + +E + E L +F VL TL G+ + L M
Sbjct: 36 DLVPMAVLGRIARLTKYMENAIALCHGEFGLGQGEFDVLATLRRSGEPYMLSPSQLYQSM 95
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI+R DRR+ + L+ +G+ LI+ P+HI C LA
Sbjct: 96 MLSSGAMTSRLDRLENKGLIAREHSKEDRRAVHVSLTAEGKALIDAALPKHIQCQSALLA 155
Query: 130 ILSDEDKETLISILKKY 146
+ ++E L ILK +
Sbjct: 156 GVPSAEREILQQILKTW 172
>gi|28901141|ref|NP_800796.1| putative transcriptional regulator [Vibrio parahaemolyticus RIMD
2210633]
gi|153838876|ref|ZP_01991543.1| transcriptional regulator [Vibrio parahaemolyticus AQ3810]
gi|28809654|dbj|BAC62629.1| putative transcriptional regulator [Vibrio parahaemolyticus RIMD
2210633]
gi|149747704|gb|EDM58614.1| transcriptional regulator [Vibrio parahaemolyticus AQ3810]
Length = 138
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G +R+++L + + T+G +TV I+ +V LI
Sbjct: 18 MSSWEQSVVKETGYSLAQVHTIEVLGGHGALRMKELAEKLGITTGTLTVQIEKLVNANLI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R P DRR+ ++ L+ +G+++ H+ V+D + E + T +S L+K
Sbjct: 78 ERCPHPEDRRAIVVRLTPEGEKIHRHHNQLHLDLVRDLTRHIEPEQQSTFLSCLEK 133
>gi|156974484|ref|YP_001445391.1| hypothetical protein VIBHAR_02201 [Vibrio harveyi ATCC BAA-1116]
gi|156526078|gb|ABU71164.1| hypothetical protein VIBHAR_02201 [Vibrio harveyi ATCC BAA-1116]
Length = 160
Score = 58.9 bits (141), Expect = 9e-08, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK---MRIQD 64
E+ +LD + M + + R + +E V + +K L +F VL TL GK + +
Sbjct: 14 EKPELDTEPMAIMGRLMRIAKHMENHVAELHKRYDLKMGEFDVLATLRRSGKPYRLTPSE 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI M+ TSG MT + + + GLI+R DRRS +EL++KG ELI+ + QH+
Sbjct: 74 LISSMMLTSGAMTNRLDKLEKKGLIAREHSKEDRRSVTVELTEKGFELIDLLIEQHLQAQ 133
Query: 125 KDALAILSDEDKETLISILK 144
+ + LS +K + LK
Sbjct: 134 HELMGSLSSAEKGQVNQALK 153
>gi|117921300|ref|YP_870492.1| transcriptional regulator, MarR family [Shewanella sp. ANA-3]
gi|117613632|gb|ABK49086.1| transcriptional regulator, MarR family [Shewanella sp. ANA-3]
Length = 197
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + +E + E L +F VL TL G+ + L M
Sbjct: 55 DLVPMAVLGRIARLTKYMENAIALCHGEFGLGQGEFDVLATLRRSGEPYMLSPSQLYQSM 114
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI+R DRR+ + L+ +G+ LI+ P+HI C LA
Sbjct: 115 MLSSGAMTSRLDRLENKGLIAREHSKEDRRAVHVSLTAEGKALIDAALPKHIQCQSALLA 174
Query: 130 ILSDEDKETLISILKKY 146
+ ++E L ILK +
Sbjct: 175 GVPSAEREILQQILKTW 191
>gi|127512970|ref|YP_001094167.1| transcriptional regulator, MarR family [Shewanella loihica PV-4]
gi|126638265|gb|ABO23908.1| transcriptional regulator, MarR family [Shewanella loihica PV-4]
Length = 137
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S E V+K+ + Q +E L G MR+++L + M T+G +TV I M GL+
Sbjct: 17 LSSWEMAVVKDAGHSLPQIHAVEILGGNGDMRMKELAEKMGITTGTLTVQIDKMELAGLV 76
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+R + DRRS L+ L+++GQ + E H A SD ++E L+S ++
Sbjct: 77 ARKAHQQDRRSILVGLTEQGQAVYREHDQLHHGLSDQLTAKFSDSERELLLSFFQR 132
>gi|114563686|ref|YP_751199.1| transcriptional regulator, MarR family protein [Shewanella
frigidimarina NCIMB 400]
gi|114334979|gb|ABI72361.1| transcriptional regulator, MarR family protein [Shewanella
frigidimarina NCIMB 400]
Length = 135
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+K+ + Q +E L S G MR+++L D + T+G +TV ++ +V GLI
Sbjct: 15 LSSWEQSVVKDTGYSLAQVHTIEVLGSHGSMRMKELADRLAITTGTLTVQVEKLVNFGLI 74
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+R+ +DRRS L+ L+ +G L + HI +D L + L +K
Sbjct: 75 TRSPHEDDRRSILVGLTSEGIALHKHHNRMHIQLTEDITRHLDQNSIDVLTKSFEK 130
>gi|115423564|emb|CAJ50100.1| MarR-family transcriptional regulator [Bordetella avium 197N]
Length = 170
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 11 EENKLDLKTMIV----FRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQ 63
E LD+ M V FR R+ E R + + L +F +L TL G + Q
Sbjct: 15 ERPDLDVSPMAVCARLFRVNVLATRNAE-RAFRAHGLHQGEFDLLATLARSGPPYALCPQ 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
LI +L +SG MT + + G + R+ +PNDRR ++ L+ GQ ++++ ++
Sbjct: 74 QLICALLLSSGAMTHRLDRLEAAGFVERSPNPNDRRGVIVSLTDLGQHTLQQVMADYLAE 133
Query: 124 VKDALAILSDEDKETLISILKK 145
+ LA L+ ++ L S+LK+
Sbjct: 134 LNHTLAPLNPAERRQLASLLKR 155
>gi|38505801|ref|NP_942420.1| MarR family transcriptional regulatory protein [Synechocystis sp.
PCC 6803]
gi|38423825|dbj|BAD02034.1| MarR family transcriptional regulatory protein [Synechocystis sp.
PCC 6803]
Length = 174
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 43 LTPTQFSVLETLYS-KGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSY 101
L+ +F++L LY+ K + + + T +T ++ + R+GL+ R + NDRR
Sbjct: 51 LSAGKFTILMQLYTAKRGLSPSEFANRANVTRATITGLLDRLEREGLVERKAHSNDRRML 110
Query: 102 LIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
I L+++G++L+E + P+H K + L+ +K+T I +L K ++
Sbjct: 111 TITLTEQGKKLVERVLPEHFCRTKGLMTNLTSTEKKTFIKLLDKLRS 157
>gi|153892300|ref|ZP_02013226.1| transcriptional regulator, MarR family [Opitutaceae bacterium TAV2]
gi|151581628|gb|EDN45255.1| transcriptional regulator, MarR family [Opitutaceae bacterium TAV2]
Length = 182
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 43 LTPTQFSVLETLYSK-------GKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDP 95
L+P +FSVL L +K +L D T MT +I + RDG+++R DP
Sbjct: 56 LSPGRFSVLMLLANKCSGGEGPSARTPAELADMAGVTRATMTGLIDTLERDGMVTRQPDP 115
Query: 96 NDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
DRR + +++KG E + I P+H + ++ L + ++ TL+ +L K
Sbjct: 116 ADRRMMSVAITEKGIEHLTTILPEHFRRMAALMSPLGETERRTLVRLLGK 165
>gi|78224637|ref|YP_386384.1| transcriptional regulator, MarR family [Geobacter metallireducens
GS-15]
gi|78195892|gb|ABB33659.1| transcriptional regulator, MarR family [Geobacter metallireducens
GS-15]
Length = 151
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 71/129 (55%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
L + +A ++ S R + LT +QF VLE L KG + +D+ +L ++GN+
Sbjct: 13 LNSYTKLMRAAESVTSRTSRPMAAAGLTISQFGVLEALLHKGPLCQRDIAAKILKSTGNI 72
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
T+VI N+ + GL+ R D DRR + L++KG LI ++F + ++ LS +++
Sbjct: 73 TMVIDNLEKQGLVRRERDMEDRRYLTVHLTEKGTILINKVFADVEASIVAEMSTLSADEQ 132
Query: 137 ETLISILKK 145
E L S+ KK
Sbjct: 133 EQLGSLCKK 141
>gi|116185931|ref|ZP_01475833.1| hypothetical protein VEx2w_02001636 [Vibrio sp. Ex25]
Length = 160
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQD 64
E+ +LD + M + + R + +E RV K+ L +F VL TL G +
Sbjct: 14 EKPELDTEPMAIMGRLMRIAKHMECRVADLHKKYDLKMGEFDVLATLRRAGSPYCLTPSA 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LID M+ TSG MT + + + G I+RT DRRS +EL++KG LI+++ +H+
Sbjct: 74 LIDSMMLTSGAMTNRLDKLEKKGFITRTHSKEDRRSVTVELTEKGLTLIDKLILEHVDVQ 133
Query: 125 KDALAILSDEDKETLISILK 144
+ L L +KE + L+
Sbjct: 134 QSLLHGLEGNEKEQVNQALR 153
>gi|127514264|ref|YP_001095461.1| transcriptional regulator, MarR family [Shewanella loihica PV-4]
gi|126639559|gb|ABO25202.1| transcriptional regulator, MarR family [Shewanella loihica PV-4]
Length = 166
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKG---KMRIQD 64
E+ +LD M + + R + +E V K+ ++ +F VL TL G ++ D
Sbjct: 19 EKPQLDTLPMAILGRMMRIYKHLETEVSACHKQFGISMGEFDVLATLRRSGEPYRLTPSD 78
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ M+ TSG MT + + + GL+SR+ DRRS + L++ G LI+E H+
Sbjct: 79 LLAAMMLTSGAMTNRVDGLEKKGLVSRSHCQEDRRSVSVGLTEAGLALIDEAIEAHVAAQ 138
Query: 125 KDALAILSDEDKETLISILKKY 146
+ + LS ++K+ L + K +
Sbjct: 139 QALTSRLSPDEKQQLDGLFKHW 160
>gi|115351633|ref|YP_773472.1| transcriptional regulator, MarR family [Burkholderia cepacia AMMD]
gi|115281621|gb|ABI87138.1| transcriptional regulator, MarR family [Burkholderia cepacia AMMD]
Length = 177
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRI 62
+E LD +M+V + + I + + L P +F VL TL G +
Sbjct: 13 VERPDLDASSMLVMGRLQEAALVIARDGLNPLFARYGLQPGEFDVLATLRRSGAPFALTP 72
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
L D ++ +SG MT I + + G + R +P D R L+ L+ G+ LI+E H+
Sbjct: 73 TALYDALMMSSGGMTARIDRLHKAGWVERLPNPADGRGTLVALTDAGRALIDEAVVAHVD 132
Query: 123 CVKDALAILSDEDKETLISILKK 145
+ LA+LS ++ L ++L+K
Sbjct: 133 NQRAMLAVLSQAEQTQLSALLEK 155
>gi|72160815|ref|YP_288472.1| regulatory protein, MarR [Thermobifida fusca YX]
gi|71914547|gb|AAZ54449.1| regulatory protein, MarR [Thermobifida fusca YX]
Length = 164
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD+ + V + R R +++ V + L P +F VL L G ++
Sbjct: 15 ERPDLDVAPLQVLSRVSRLARHLDRARRSVFAAHDLEPWEFDVLAELRRSGHPYELSPGR 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ L TSG MT I + DGL+ R DP DRR L+ L+ +G+E ++ +
Sbjct: 75 LMRATLVTSGTMTNRIDRLTEDGLVRRLPDPTDRRGVLVRLTDEGRERVDAALADLLRYE 134
Query: 125 KDALAILSDEDKETLISILK 144
+ LA L+ +++ L ++L+
Sbjct: 135 ESLLAALTTAERDQLATLLR 154
>gi|84361821|ref|ZP_00986464.1| COG1846: Transcriptional regulators [Burkholderia dolosa AUO158]
gi|124894973|gb|EAY68853.1| Transcriptional regulator [Burkholderia dolosa AUO158]
Length = 177
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRI 62
+E LD +M+V + + I + + + P +F VL TL G +
Sbjct: 13 VERPDLDASSMLVMGRLQEAALVIARDRLNPLFARYGMQPGEFDVLATLRRSGAPFALTP 72
Query: 63 QDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHIL 122
L D ++ +SG MT I + + G + R +P D R L+ L++ G+ LI++ H+
Sbjct: 73 TALYDALMMSSGGMTARIDRLQKAGWVERRPNPADGRGTLVALTEAGRALIDDAVVAHVD 132
Query: 123 CVKDALAILSDEDKETLISILKK 145
+ LA LSD ++ L +L+K
Sbjct: 133 NQRAILAALSDAEQAQLAQLLEK 155
>gi|118710338|ref|ZP_01562917.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
MC0-3]
gi|118652257|gb|EAV59043.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
MC0-3]
Length = 177
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRIQ 63
E LD +M+V + + I + + + P +F VL TL G +
Sbjct: 14 ERPDLDATSMVVMGRLQEAALVIARDRLNPLFARYGMQPGEFDVLATLRRSGAPFALTPT 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L D ++ +SG MT I + + G + R +P D R L+ L+ G+ LI+E HI
Sbjct: 74 ALYDALMMSSGGMTARIDRLQKAGWVERRPNPADGRGTLVALTDAGRALIDEAVVAHIDN 133
Query: 124 VKDALAILSDEDKETLISILKK 145
+ LA+LS ++ L +L K
Sbjct: 134 QRAVLAVLSAAEQAQLSELLGK 155
>gi|27367033|ref|NP_762560.1| Transcriptional regulator [Vibrio vulnificus CMCP6]
gi|37676816|ref|NP_937212.1| transcriptional regulator [Vibrio vulnificus YJ016]
gi|27358601|gb|AAO07550.1|AE016810_53 Transcriptional regulator [Vibrio vulnificus CMCP6]
gi|37201360|dbj|BAC97182.1| transcriptional regulator [Vibrio vulnificus YJ016]
Length = 138
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 67/116 (57%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G +R+++L + + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYSLAQIHTIEVLGCHGALRMKELAEKLGITTGTLTVQIEKLVKAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R + P DRR+ +++L++ GQ + + H+ V++ + +E + L+S L+K
Sbjct: 78 ERCALPEDRRAIVVKLTEAGQVIHRQHNQLHLDLVRELTRHIDEEQQALLLSCLEK 133
>gi|83310584|ref|YP_420848.1| Transcriptional regulator [Magnetospirillum magneticum AMB-1]
gi|82945425|dbj|BAE50289.1| Transcriptional regulator [Magnetospirillum magneticum AMB-1]
Length = 158
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLAT-S 73
LD + V R+A + +I Q + LTPTQ++VL L+ G + Q+L+ M A +
Sbjct: 28 LDGQIGFVIRRAHQRTTAIFQEHFPD--LTPTQWAVLAKLHETGPLS-QNLVGRMTAMDA 84
Query: 74 GNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILS 132
M V++ ++ L++RTSDPNDRR + L+Q G+E + + + ++ L+ LS
Sbjct: 85 ATMQGVVRRLMERDLVTRTSDPNDRRRLTLCLTQLGRETVAGHAEKALAVSRETLSPLS 143
>gi|145619713|ref|ZP_01775759.1| transcriptional regulator, MarR family [Geobacter bemidjiensis Bem]
gi|144943963|gb|EDJ79042.1| transcriptional regulator, MarR family [Geobacter bemidjiensis Bem]
Length = 142
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+ KA + I + E LTP QF +L L+ + + L M +I
Sbjct: 16 LLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLSAKSQIDRTTMGGLID 75
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ ++GL++R +DP+DRR+Y I L+ KG+ L E+ P + + +A L+ E++ETL S
Sbjct: 76 RLEKEGLVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRKLVAKLTSEEQETLKS 135
Query: 142 ILKKYKN 148
+L+K ++
Sbjct: 136 LLEKIRS 142
>gi|52143056|ref|YP_083773.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|51976525|gb|AAU18075.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
Length = 138
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 53/85 (62%)
Query: 36 RVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDP 95
+ I++ +++ QF V++ L GK+ + LI++M NMT +I+ M RDG + +P
Sbjct: 23 KAIEQYEISYVQFGVIQVLSKSGKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNP 82
Query: 96 NDRRSYLIELSQKGQELIEEIFPQH 120
ND+R L+ L++KG+E +++ Q+
Sbjct: 83 NDQRETLVYLTKKGEETKKQVDVQY 107
>gi|145299738|ref|YP_001142579.1| transcriptional regulatory protein, MarR family [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142852510|gb|ABO90831.1| transcriptional regulatory protein, MarR family [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 160
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK-MRIQDLIDHML 70
LD M V + R + V +E K L + F +L TL G+ + L +
Sbjct: 20 LDCSPMGVLGRVARMAAIAGREVSEELKTCGLLGSDFDILATLRRAGEPLTPTALYQAAM 79
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
+SG MT + + GLI R + P+DRRS L+ L+ G+EL++ QH+ + LA
Sbjct: 80 LSSGAMTARLDKLAERGLIERQAAPSDRRSLLVCLTASGRELVDRAVEQHVANERRLLAP 139
Query: 131 LSDEDKETLISILKKY 146
L++ ++ L ++LK++
Sbjct: 140 LTEAEQAQLAALLKRW 155
>gi|49477695|ref|YP_036548.1| transcriptional regulator, MarR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49329251|gb|AAT59897.1| transcriptional regulator, MarR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 138
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 36 RVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDP 95
+ I++ ++ QF V++ L GK+ + LI++M NMT +I+ M RDG + +P
Sbjct: 23 KAIEQYDISYVQFGVIQVLAKSGKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNP 82
Query: 96 NDRRSYLIELSQKGQELIEEIFPQH 120
ND+R L+ L++KG+E +++ Q+
Sbjct: 83 NDQRETLVYLTKKGEETKKQVDVQY 107
>gi|73542676|ref|YP_297196.1| regulatory protein, MarR [Ralstonia eutropha JMP134]
gi|72120089|gb|AAZ62352.1| regulatory protein, MarR [Ralstonia eutropha JMP134]
Length = 167
Score = 57.0 bits (136), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETL--YSKGKMRIQDLIDH 68
E +L L+ + E IRS R+ ++ T +F +L L + +G +++ +L
Sbjct: 27 EALRLWLRLLTCTNLVEADIRS---RLRQDFACTLPRFDLLSQLDRHPEG-LKMGELSRR 82
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
M+ T GN+T + + ++GL+SR + P DRR+YLI L+ G+E + H ++
Sbjct: 83 MMVTGGNVTGITDQLQQEGLVSREALPTDRRAYLIRLTPAGREAFSRMARAHEDWIEQLF 142
Query: 129 AILSDEDKETLISILKKYK 147
+ L+D D+ L +L + K
Sbjct: 143 SGLADTDRRALFRLLGRLK 161
>gi|84353565|ref|ZP_00978491.1| COG1846: Transcriptional regulators [Burkholderia cenocepacia
PC184]
Length = 142
Score = 57.0 bits (136), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM 83
++A R + I V++ LT QFS+L +L ++ + + +T +K +
Sbjct: 12 QRAARNLARIFDDVLRPLDLTNGQFSLLMSLNRPQPAPMKSVASLLAMDRTTLTAALKPL 71
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
R GL++ T DP+DRRS L+EL+ G EL+ E FP
Sbjct: 72 ERRGLVTITQDPDDRRSRLLELTPAGHELLAEAFP 106
>gi|24373152|ref|NP_717195.1| transcriptional regulator, MarR family [Shewanella oneidensis MR-1]
gi|24347357|gb|AAN54639.1|AE015604_3 transcriptional regulator, MarR family [Shewanella oneidensis MR-1]
Length = 179
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 16 DLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQDLIDHM 69
DL M V + R + +E + E L +F VL TL G+ + L M
Sbjct: 36 DLVPMAVLGRIARLTKYMENAIALCHGEFGLGQGEFDVLATLRRSGEPYTLSPSQLYQSM 95
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+ +SG MT + + GLI+R DRR+ + L+ +G+ LI+ P+H+ C LA
Sbjct: 96 MLSSGAMTSRLDRLENKGLIARAHSKEDRRAVHVSLTTEGKALIDAALPKHLQCQHALLA 155
Query: 130 ILSDEDKETLISILKKY 146
+ ++ L ILK +
Sbjct: 156 GVPSAERTVLQQILKHW 172
>gi|27378940|ref|NP_770469.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
gi|27352090|dbj|BAC49094.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
Length = 151
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
LD + + R+ + SI R I N LTPTQ++ L L G L
Sbjct: 20 LDEQVGFILRQVWQRHSSIFSRDIGTN-LTPTQWAALSKLAETGPCSQNQLGRLTAMDVA 78
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
+ VI + GL + DP D R L+ L++ GQ+L E++ P + ++ LA L +
Sbjct: 79 TIKGVIDRLTARGLTETSQDPEDGRRLLVSLTRAGQQLAEKLAPNALAITRETLAPLDAK 138
Query: 135 DKETLISILKKYK 147
++E L+++L K +
Sbjct: 139 EREMLMALLSKLR 151
>gi|119716374|ref|YP_923339.1| regulatory protein, MarR [Nocardioides sp. JS614]
gi|119537035|gb|ABL81652.1| regulatory protein, MarR [Nocardioides sp. JS614]
Length = 214
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 29 TIRSIEQRVIKENKLTPTQFSVLETLYS-KGKMRIQDLIDHMLATSGNMTVVIKNMVRDG 87
T+ E + +KL T F++L L+ G + +++L + + N+T +++++ G
Sbjct: 67 TVSRAEGIELGPSKLNGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVRDLIDRG 126
Query: 88 LISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
L++R +P DRRSY + ++ +G+ L+ + P H + + LS ++ + L +L++
Sbjct: 127 LLARNENPEDRRSYTVGIAPRGENLLSALLPGHWSMLSVIFSSLSHDELDVLSGLLER 184
>gi|126731900|ref|ZP_01747704.1| transcriptional regulatory protein [Sagittula stellata E-37]
gi|126707727|gb|EBA06789.1| transcriptional regulatory protein [Sagittula stellata E-37]
Length = 148
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
LD + + RKA + +I ++ +LT TQF+++ L G M Q+L+ +A G
Sbjct: 17 LDEQIGFLLRKAYQRNSNIFLELVP-GRLTTTQFAIMHRLAEDGPMS-QNLLGRSVAMDG 74
Query: 75 NMT--VVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILS 132
T VV + + R+ L++R DP DRR +L+ L+ KG LI E I + LA L
Sbjct: 75 ATTKGVVDRLIARELLVTR-RDPKDRRRHLVSLTPKGIALINEAVEAAIRVTNETLAPLR 133
Query: 133 DEDKETLISILKK 145
+ +KETL+ +L K
Sbjct: 134 EREKETLLRLLAK 146
>gi|153011346|ref|YP_001372560.1| transcriptional regulator, MarR family [Ochrobactrum anthropi ATCC
49188]
gi|151563234|gb|ABS16731.1| transcriptional regulator, MarR family [Ochrobactrum anthropi ATCC
49188]
Length = 204
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 8 ELLEENKLDLKTMIVFRKAERTI-RSIEQRVIKENKLTPTQFSVLETLYSK-GKMRIQDL 65
E+ E K +L+ + R + + I +R+ KE +T QF +L LY + +R+ +L
Sbjct: 50 EVDESEKQELRLWLRMLATTRLVSQEIRRRLRKEFGVTLPQFDILAQLYREPNGLRLGEL 109
Query: 66 IDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVK 125
+ T+GN+T +I+ + DGL+ R + DRR + L+ GQ + E+ H ++
Sbjct: 110 SRRTMVTNGNITGLIERLEADGLVRRETPGADRRVTVARLTDSGQTVFAEMARVHESWLR 169
Query: 126 DALAILSDEDKETLISILKKYKNL 149
D ++++ D++T+ S+L+ K L
Sbjct: 170 D---LMAEVDRDTIASLLRDMKRL 190
>gi|89093132|ref|ZP_01166082.1| probable regulatory protein, MarR family protein [Oceanospirillum
sp. MED92]
gi|89082428|gb|EAR61650.1| probable regulatory protein, MarR family protein [Oceanospirillum
sp. MED92]
Length = 167
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 35 QRVIKENKLTPTQFSVLETLYSKGKMRI---QDLIDHMLATSGNMTVVIKNMVRDGLISR 91
++ E L +F VL TL G + L ++ TSG MT +K + + GLI+R
Sbjct: 46 EKTFAEYGLNYWEFDVLATLRRAGSLYSLAPTALFSTLMVTSGTMTHRLKGLEKRGLIAR 105
Query: 92 TSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
T++P D RS L+EL+++G +LI++ H ++ L+ L++++++ L + L+K +L
Sbjct: 106 TANPEDARSMLVELTEEGFQLIDKAVTAHTENLERILSPLTEDEQQQLDNALRKILSL 163
>gi|149908981|ref|ZP_01897640.1| probable regulatory protein, MarR family [Moritella sp. PE36]
gi|149807992|gb|EDM67935.1| probable regulatory protein, MarR family [Moritella sp. PE36]
Length = 160
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 4 KTLEELLE-ENKLDLKTMIVFRKAERTIRSIEQR---VIKENKLTPTQFSVLETLYS-KG 58
K LE+ L LD M V + +T + +++ V KE+ L+ +F +L T+
Sbjct: 8 KILEQWLAVRPDLDCSAMGVIGRLRQTSDTWKKKLDPVFKEHGLSGIEFDILATIRRCDT 67
Query: 59 KMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
+ +L ++ +SG +++ I+++V+ G I R + DRRS + L++KG EL++
Sbjct: 68 PVTPTELYHTLMLSSGAVSMRIEHLVKSGFIQRIASEQDRRSCKVTLTKKGVELVDTALN 127
Query: 119 QHILCVKDALAILSDEDKETLISILKK 145
H+ + + L++LS++++ L ++L+K
Sbjct: 128 AHVANMDNMLSVLSNQEQAQLANLLRK 154
>gi|117620679|ref|YP_856077.1| transcriptional regulator, MarR family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562086|gb|ABK39034.1| transcriptional regulator, MarR family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 160
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 38 IKENKLTPTQFSVLETLYSKGK-MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPN 96
+KE L + F +L TL G+ + L + +SG MT + + GLI R + P+
Sbjct: 46 LKECGLLGSDFDILATLRRAGEPLTPTVLYQSAMLSSGAMTARLDKLAERGLIERQAAPS 105
Query: 97 DRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKY 146
DRRS L+ L+ G+EL++ +H+ + LA L+ ++E L ++LK++
Sbjct: 106 DRRSLLVCLTDAGRELVDRAVERHVANERRLLAPLTLAEQEQLAALLKRW 155
>gi|124875575|gb|EAY65565.1| regulatory protein, MarR [Burkholderia cenocepacia PC184]
Length = 155
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM 83
++A R + I V++ LT QFS+L +L ++ + + +T +K +
Sbjct: 25 QRAARNLARIFDDVLRPLDLTNGQFSLLMSLNRPQPAPMKSVASLLAMDRTTLTAALKPL 84
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
R GL++ T DP+DRRS L+EL+ G EL+ E FP
Sbjct: 85 ERRGLVTITQDPDDRRSRLLELTPAGHELLAEAFP 119
>gi|76259688|ref|ZP_00767334.1| regulatory protein, MarR [Chloroflexus aurantiacus J-10-fl]
gi|76165412|gb|EAO59546.1| regulatory protein, MarR [Chloroflexus aurantiacus J-10-fl]
Length = 156
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 62/115 (53%)
Query: 34 EQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTS 93
++R + LTP +F++L L + R+ D+ +L +T ++ + RDGL+ R
Sbjct: 26 DRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAKLLCVKSTITRLVDRLERDGLVKRNP 85
Query: 94 DPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
DP+DRR+ + L+ +G + E H V+ + +L ++++E L +L K ++
Sbjct: 86 DPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRMGLLDEQEQEQLTRLLLKLRD 140
>gi|108761384|ref|YP_629204.1| transcriptional regulator, MarR family [Myxococcus xanthus DK 1622]
gi|108465264|gb|ABF90449.1| transcriptional regulator, MarR family [Myxococcus xanthus DK 1622]
Length = 182
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQ--------DLIDH 68
++T I +A + + + + L+ +F VL L++ ++ DL +
Sbjct: 35 IETCITLLRASHDLSGAYEAHLGRHGLSMGRFMVLVRLFTTEDDDVERVRGLTPADLAES 94
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
+ MT ++ + +D LISR P DRR Y + L+ K ++LIE + P H + +
Sbjct: 95 SGVSRATMTGLLDTLEKDALISREDHPEDRRMYTVRLTPKARQLIESVLPDHYRRIAALM 154
Query: 129 AILSDEDKETLISILKK 145
A LS+E++ TL ++L K
Sbjct: 155 APLSEEERTTLRTLLAK 171
>gi|118047912|ref|ZP_01516537.1| regulatory protein, MarR [Chloroflexus aggregans DSM 9485]
gi|117995594|gb|EAV09810.1| regulatory protein, MarR [Chloroflexus aggregans DSM 9485]
Length = 156
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 61/115 (53%)
Query: 34 EQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTS 93
++R + LTP +F++L L + R+ D+ +L +T ++ + RDGL+ R
Sbjct: 26 DRRALAHTNLTPLEFNLLLQLDLEQGQRLTDVGAKLLCVKSTITRLVDRLERDGLVRRNP 85
Query: 94 DPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
DP+DRR+ + L+ +G + E H V+ + +L E++E L +L K ++
Sbjct: 86 DPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRMNLLDPEEQEQLTRLLLKLRD 140
>gi|116691663|ref|YP_837196.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
HI2424]
gi|116649663|gb|ABK10303.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
HI2424]
Length = 155
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM 83
++A R + I V++ LT QFS+L +L ++ + + +T +K +
Sbjct: 25 QRAARNLARIFDDVLRPLDLTNGQFSLLMSLNRPQPAPMKSVASLLAMDRTTLTAALKPL 84
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
R GL++ T DP+DRRS L+EL+ G EL+ E FP
Sbjct: 85 ERRGLVTITQDPDDRRSRLLELTPAGHELLAEAFP 119
>gi|83649290|ref|YP_437725.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83637333|gb|ABC33300.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 172
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKEN----KLTPTQFSVLETLYSKG---KMRIQ 63
E+ L + M +F + R I + + IKE L+ +F VL TL G ++
Sbjct: 23 EKPDLQAQPMGIFGRLHR-IHAFTHQTIKETLAGYGLSIDEFDVLATLRRSGAPYRLTPT 81
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L + +SG MT + + R LI R D NDRRS ++ L+ +G ELI++ H+
Sbjct: 82 QLYTAAMLSSGAMTNRLDKLERKQLIQRQPDENDRRSVIVALTDEGMELIDKAVESHVET 141
Query: 124 VKDALAILSDEDKETLISILKKY 146
+ L L ED+E L +L+K+
Sbjct: 142 EWELLKQLEGEDQEQLADLLRKW 164
>gi|78066303|ref|YP_369072.1| transcriptional regulator, MarR family [Burkholderia sp. 383]
gi|77967048|gb|ABB08428.1| transcriptional regulator, MarR family [Burkholderia sp. 383]
Length = 171
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRIQ 63
E LD +M+V + + I + + + P +F VL TL G +
Sbjct: 14 ERPDLDASSMVVTGRLQEAALVIARDRLNPLFARYGMQPGEFDVLATLRRGGAPFALTPT 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L D ++ +SG MT I + + G + R +P D R L+ L++ G+ LI+E HI
Sbjct: 74 ALYDALMMSSGGMTARIDRLQKAGWVERRPNPADGRGTLVALTETGRALIDEAVVAHIDN 133
Query: 124 VKDALAILSDEDKETL 139
++ L +LSD ++ L
Sbjct: 134 QRELLGVLSDAEQAQL 149
>gi|34496032|ref|NP_900247.1| probable transcriptional regulator, MarR family [Chromobacterium
violaceum ATCC 12472]
gi|34101886|gb|AAQ58253.1| probable transcriptional regulator, MarR family [Chromobacterium
violaceum ATCC 12472]
Length = 165
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKE---NKLTPTQFSVLETLYSKG---KMRIQDLIDH 68
LD V + R I +RV+++ + L +F VL L G ++ L
Sbjct: 22 LDTSATQVIGRIVRMEYFITRRVLQDLARHNLNVGEFDVLAALRRGGEPYQLSPNQLQGM 81
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
+L +SG +T I + GL+SR+ DP+DRR ++ L+ KG ++IE+ H+ + +
Sbjct: 82 VLISSGALTNRINRLEEAGLVSRSPDPDDRRGVIVTLTAKGLQVIEDAAGHHLAAEAELI 141
Query: 129 AILSDEDKETLISILKK 145
+L ++++TL +LKK
Sbjct: 142 EMLDADERQTLARLLKK 158
>gi|118615972|ref|YP_904304.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118568082|gb|ABL02833.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length = 167
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 42 KLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSY 101
+LT Q S+L TL +G +R+ DL H + TV I+ + + GL+ R+ DP+D R+
Sbjct: 41 ELTLAQLSILVTLLDRGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAV 100
Query: 102 LIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNLS 150
L++++ +G+ + + + L L D ETL++ L + L+
Sbjct: 101 LVDITPQGRSVHAKSLANRHAALAAMLDQLPHSDLETLMTALTPLERLA 149
>gi|153900267|ref|ZP_02020829.1| transcriptional regulator, TrmB [Methylobacterium extorquens PA1]
gi|151588929|gb|EDN52341.1| transcriptional regulator, TrmB [Methylobacterium extorquens PA1]
Length = 192
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
L+ F + R + + ++E L+ QF VL TL + + Q+L + T GN+
Sbjct: 53 LRVWFRFIRLSRRVTAAVATELRELGLSIPQFDVLSTLSEREGLTQQELAARLYVTKGNV 112
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
+ +I +V GL+ R P DRRS+ + L++ G E+ + V L L + D
Sbjct: 113 SGLIDRLVEAGLVERRPIPGDRRSHALHLTEAGAEVADRGIAAQADYVARTLGQLDETDL 172
Query: 137 ETLISILKKYKNLS 150
++ K++ L+
Sbjct: 173 RAFEDLVVKWRELA 186
>gi|83949480|ref|ZP_00958213.1| putative transcription regulator protein [Roseovarius nubinhibens
ISM]
gi|83837379|gb|EAP76675.1| putative transcription regulator protein [Roseovarius nubinhibens
ISM]
Length = 163
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIE---QRVIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD M + + R + + Q+ + + L F +L TL G ++ D
Sbjct: 14 ERPDLDTGPMAIIGRMSRLVLEMSAEMQKTFRAHGLNAAGFDLLATLRRAGAPYRLSPGD 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI + TSG MT I +V+ GL+ R + DRRS L+ L+ +G IE + H+
Sbjct: 74 LIASSMVTSGTMTNRIDQLVKAGLVERIAQEGDRRSVLVGLTAEGLARIEGMLEAHVATQ 133
Query: 125 KDALAILSDEDKETLISILKKYK 147
LA L ++ L +L++ +
Sbjct: 134 ARLLAGLDAAERAQLDGLLRQMQ 156
>gi|91223877|ref|ZP_01259141.1| transcriptional regulator, MarR family protein [Vibrio
alginolyticus 12G01]
gi|91191369|gb|EAS77634.1| transcriptional regulator, MarR family protein [Vibrio
alginolyticus 12G01]
Length = 160
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK---MRIQD 64
E+ LD + M + + R + +E RV + +K L +F VL TL G +
Sbjct: 14 EKPDLDTEPMAIMGRLMRIAKHMESRVAELHKKYDLKMGEFDVLATLRRAGSPYCLTPSA 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI+ M+ TSG MT + + + G I+RT DRRS +EL+ +G LI+++ +H+
Sbjct: 74 LIESMMLTSGAMTNRLDKLEKKGFITRTHSKEDRRSVTVELTGQGLTLIDKLILEHVDVQ 133
Query: 125 KDALAILSDEDKETLISILK 144
+ L L +KE + LK
Sbjct: 134 QSLLHGLEGNEKEQVNQALK 153
>gi|156449290|ref|ZP_02055673.1| transcriptional regulator, TrmB [Methylobacterium chloromethanicum
CM4]
gi|156191827|gb|EDO24013.1| transcriptional regulator, TrmB [Methylobacterium chloromethanicum
CM4]
Length = 192
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 17 LKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNM 76
L+ F + R + + ++E L+ QF VL TL + + Q+L + T GN+
Sbjct: 53 LRVWFRFIRLSRRVTAAVATELRELGLSIPQFDVLSTLSEREGLTQQELAARLYVTKGNV 112
Query: 77 TVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDK 136
+ +I +V GL+ R P DRRS+ + L++ G E+ + V L L + D
Sbjct: 113 SGLIDRLVEAGLVERRPIPGDRRSHALHLTEAGAEVADRGIAAQADYVARTLGQLDETDL 172
Query: 137 ETLISILKKYKNLS 150
++ K++ L+
Sbjct: 173 RAFEDLVVKWRELA 186
>gi|152981973|ref|YP_001352045.1| transcriptional regulator, MarR family [Janthinobacterium sp.
Marseille]
gi|151282050|gb|ABR90460.1| transcriptional regulator, MarR family [Janthinobacterium sp.
Marseille]
Length = 149
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LTP+QF ++ TL + M ++L + L T G +T VI + GL++R + DRRS L
Sbjct: 33 LTPSQFDIIATLGNTCGMSFKELGERTLITKGTLTGVIDRLEEKGLVTRVTQIEDRRSTL 92
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
++L+ G + +F Q + K + +D + L L K
Sbjct: 93 VKLTAAGDAEFKRVFSQQVAFGKQSFVNYDAQDFDALDKELTK 135
>gi|150021407|ref|YP_001306761.1| transcriptional regulator, TrmB [Thermosipho melanesiensis BI429]
gi|149793928|gb|ABR31376.1| transcriptional regulator, TrmB [Thermosipho melanesiensis BI429]
Length = 141
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 63/114 (55%)
Query: 35 QRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSD 94
+ V+KE +TP QF +++ LY G+ + +L + T ++ + +G + R
Sbjct: 21 REVLKEFPITPAQFDLMQKLYFAGEQTMTELSRMLGIAKSTTTGLVSRLENEGFVERKRR 80
Query: 95 PNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
ND+R ++ L++KG+ +I+++ + I V++ L + KE L+S+L+K N
Sbjct: 81 KNDKRIIIVVLTKKGEYVIDKVIFKRIEFVEEVLKDFDNNSKEVLVSLLEKLNN 134
>gi|149119602|ref|ZP_01846073.1| transcriptional regulator, TrmB [Methylobacterium sp. 4-46]
gi|148522534|gb|EDK95460.1| transcriptional regulator, TrmB [Methylobacterium sp. 4-46]
Length = 160
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
L+ QF VL TL + + QDL + + T GN++ ++ +V GL+ R P DRRS+
Sbjct: 45 LSIPQFDVLSTLSEQEGLTQQDLAERLYVTKGNVSGLVDRLVEAGLVERRPIPGDRRSHA 104
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNLS 150
+ L+Q G++L V L L +D +L ++ ++ ++
Sbjct: 105 LHLTQVGRDLARSGMAAQTAYVVRTLGTLPADDLASLERVVLAWRGVA 152
>gi|21221104|ref|NP_626883.1| MarR-family regulatory protein [Streptomyces coelicolor A3(2)]
gi|6900946|emb|CAB71822.1| putative MarR-family regulatory protein [Streptomyces coelicolor
A3(2)]
Length = 172
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK---MRIQDLIDH 68
LD M VF + R R++ R+ K + ++ +F L TL G+ + + L
Sbjct: 29 LDTAAMEVFGRVFRLARAMGDRMEKAYERFGISRGEFDALATLRRSGEPYTLSPRQLSAT 88
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
++ T+G MT + + R GL+ R+ DP+DRR + L+++G ELI+E + +AL
Sbjct: 89 LMLTTGGMTGRLDKLERAGLLRRSPDPHDRRGLQVTLTERGLELIDEAVGAGLDAQTEAL 148
Query: 129 AILSDEDKETLISILK 144
+ L E L +L+
Sbjct: 149 SSLDAERSGQLAGLLR 164
>gi|15964053|ref|NP_384406.1| PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Sinorhizobium meliloti
1021]
gi|15073229|emb|CAC41737.1| PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Sinorhizobium meliloti]
Length = 164
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKG---KMRIQD 64
E +LD M + + R + + V + ++ L F VL TL G ++ D
Sbjct: 18 ERPELDATAMGLLGRLSRLRAHLAREVESTLADHGLNSASFDVLATLRRSGPPFRLSPGD 77
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ + TSG MT I + + GL+ R +P DRR LI L+ +G + ++ H+
Sbjct: 78 LLGTTMVTSGTMTNRIDQLEKAGLVERLDNPEDRRGVLIALTPEGLKRVDAAVTAHVANQ 137
Query: 125 KDALAILSDEDKETLISILKKY 146
+ +A L +++E L ++L+K+
Sbjct: 138 QRLVAGLEPDEREALDALLRKF 159
>gi|41406148|ref|NP_958984.1| hypothetical protein MAP0050c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394496|gb|AAS02367.1| hypothetical protein MAP_0050c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 182
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LT Q S+L TL +G +R+ DL H + TV I+ + + GL+ R+ DP+D R+ L
Sbjct: 57 LTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKVGLVKRSRDPSDLRAVL 116
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNLS 150
++++ +G+ + E + L+ L + D +TL+ L + L+
Sbjct: 117 VDITPRGRAVHGESLANRRAALAAMLSQLPESDLDTLMKALAPLERLA 164
>gi|134295724|ref|YP_001119459.1| transcriptional regulator, MarR family [Burkholderia vietnamiensis
G4]
gi|134138881|gb|ABO54624.1| transcriptional regulator, MarR family [Burkholderia vietnamiensis
G4]
Length = 170
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRIQ 63
E LD +M+V + + I + + L P +F VL TL G +
Sbjct: 14 ERPDLDATSMLVMGRLQEAALVIARDGLNPLFARYGLQPGEFDVLATLRRSGAPFALTPT 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L D ++ +SG MT I + + G + R +P D R L+ L+ G+ LI+E H+
Sbjct: 74 ALYDALMMSSGGMTARIDRLQKAGWVERRPNPADGRGTLVALTDAGRALIDEAVGAHVDN 133
Query: 124 VKDALAILSDEDK 136
+ LA LSD ++
Sbjct: 134 QRAMLAALSDAEQ 146
>gi|156977621|ref|YP_001448527.1| hypothetical protein VIBHAR_06409 [Vibrio harveyi ATCC BAA-1116]
gi|156529215|gb|ABU74300.1| hypothetical protein VIBHAR_06409 [Vibrio harveyi ATCC BAA-1116]
Length = 138
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+K + Q +E L G +R+++L + + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGITTGTLTVQIEKLVKAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R P DRR+ +++L+ G+E+ H+ V+D + + + L + L+K
Sbjct: 78 ERCPHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNIDPDHQAILFACLQK 133
>gi|28898537|ref|NP_798142.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
RIMD 2210633]
gi|153836213|ref|ZP_01988880.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AQ3810]
gi|28806755|dbj|BAC60026.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
RIMD 2210633]
gi|149750488|gb|EDM61233.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AQ3810]
Length = 160
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKG---KMRIQD 64
E+ LD + M + + R + +E RV K+ L +F VL TL G ++ +
Sbjct: 14 EKPDLDTEPMAIMGRLMRIAKHMECRVADLHKQYDLKMGEFDVLATLRRAGAPYRLTPSE 73
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI M+ TSG MT + + + G I+R DRRS +EL+ +G LIE + +H+
Sbjct: 74 LIASMMLTSGAMTNRLDKLEKKGFIAREHSKEDRRSVTVELTTEGLALIESLIQEHVDVQ 133
Query: 125 KDALAILSDEDKETLISILK 144
++ LS ++K + LK
Sbjct: 134 HSLISGLSADEKSQVNQALK 153
>gi|113939473|ref|ZP_01425327.1| regulatory protein, MarR [Herpetosiphon aurantiacus ATCC 23779]
gi|113898901|gb|EAU17909.1| regulatory protein, MarR [Herpetosiphon aurantiacus ATCC 23779]
Length = 165
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 36 RVIKENKLTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRT 92
R+ + L +F VL +L G + L + ++ +SG MT + + GLI R
Sbjct: 43 RIFGQFGLQRGEFDVLASLRRSGAPYQRSPTALFNTLMLSSGAMTNRLDRLADRGLIERI 102
Query: 93 SDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILK 144
DP+DRRS L++L+ +G +LI H+ + +A LS E +E L ++L+
Sbjct: 103 PDPHDRRSLLVQLTAEGLDLINRAVEAHLANEQRLIASLSSEQREQLATLLR 154
>gi|17544868|ref|NP_518270.1| PROBABLE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum
GMI1000]
gi|17427157|emb|CAD13677.1| probable transcription regulator protein [Ralstonia solanacearum]
Length = 157
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKGK---MRIQD 64
E LD M V + R + Q V I + L P F VL TL +G+ +
Sbjct: 11 ERPDLDPSPMAVCGEVWRAGERLRQGVVANIADADLDPAGFDVLLTLRRQGRGNTLSPSA 70
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L M+ ++ MT + + + GLI+R +DP+DRR I L+ G L++ + H++
Sbjct: 71 LAKDMMLSTSAMTNRLDRLEKRGLIARQTDPDDRRGLRIVLTDAGFALVDGLVASHLVTE 130
Query: 125 KDALAILSDEDKETLISILKK 145
+ LA LS ++ L +L+K
Sbjct: 131 ERMLAALSQAERAMLRELLEK 151
>gi|33603731|ref|NP_891291.1| MarR-family transcriptional regulator [Bordetella bronchiseptica
RB50]
gi|33577856|emb|CAE35121.1| MarR-family transcriptional regulator [Bordetella bronchiseptica
RB50]
Length = 149
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 32 SIEQRVIKENKLTPTQFSVLETL---YSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGL 88
S++++ KE ++ Q++VL L + G M +L D+++ + ++ V+K + R+G
Sbjct: 23 SLQRQAGKELGISTVQWAVLGALTRPQAAGGMTFGELADYLVVSRQSLDGVLKRLEREGH 82
Query: 89 ISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKN 148
+ R DPNDRR+ ++ L GQ +EI P + A+ +D T + L + ++
Sbjct: 83 VRRVPDPNDRRARVVILLPAGQRFWDEIQPNIYEFYRQAMKSFHFDDSVTFVHFLNRLQH 142
>gi|86147753|ref|ZP_01066061.1| Transcriptional regulator [Vibrio sp. MED222]
gi|85834534|gb|EAQ52684.1| Transcriptional regulator [Vibrio sp. MED222]
Length = 138
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G +R+++L + + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYSLAQVHTIEVLGMHGALRMKELAEKLGITTGTLTVQIEKLVKAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R P DRR+ ++ L+ +GQ++ H+ V + + +++K L+ L K
Sbjct: 78 ERHEHPTDRRAIVVALTDEGQKIHVHHNQLHLNLVNELTQDIEEDEKAVLLKCLSK 133
>gi|33592986|ref|NP_880630.1| MarR-family transcriptional regulator [Bordetella pertussis Tohama
I]
gi|33572634|emb|CAE42228.1| MarR-family transcriptional regulator [Bordetella pertussis Tohama
I]
Length = 161
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+ R+A + +I Q+ I ++KLT QF VL L +G + D++ + VI+
Sbjct: 24 LLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIE 83
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ L++ + DP DRR L+ L+ G+ L+EE+ P + L+ ++ ++
Sbjct: 84 RLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVY 143
Query: 142 ILKKYKN 148
+L+K +
Sbjct: 144 LLRKMSD 150
>gi|86355936|ref|YP_467828.1| probable transcriptional regulator protein, MarR family [Rhizobium
etli CFN 42]
gi|86280038|gb|ABC89101.1| probable transcriptional regulator protein, MarR family [Rhizobium
etli CFN 42]
Length = 165
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 11 EENKLDLKTMIVFRKAERTI----RSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQ 63
E LD++ M + + +R R +E V+ ++ L+ + F VL TL G ++
Sbjct: 19 ERPDLDVEPMGILGRLKRLGTHLGREVEA-VLMQHGLSTSAFDVLATLRRSGAPHRLSPG 77
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
+L++ + +SG MT I + + GL+ R +P DRRS LI L++KG +EE H+
Sbjct: 78 ELLEMTMVSSGTMTNRIDQLEKAGLVERIVNPQDRRSVLIALTEKGLATVEEAVGAHVAN 137
Query: 124 VKDALAILSDEDKETLISILKKY 146
+ L+ D+ +LKK+
Sbjct: 138 QQRLTRNLTAGDRAEFDRLLKKF 160
>gi|87121916|ref|ZP_01077801.1| regulatory protein [Marinomonas sp. MED121]
gi|86162714|gb|EAQ63994.1| regulatory protein [Marinomonas sp. MED121]
Length = 169
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKG---KMRIQ 63
LE L L M +F + +R + R+ + L +F VL TL G +
Sbjct: 21 LERPDLSLDAMGIFGRLKRCSMLMTDRLDNTFAKFDLNYWEFDVLATLRRSGAPYTLAPT 80
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
+L M+ TSG MT +K + GLI R +P D RS L++LSQ G E+I + H+
Sbjct: 81 ELFSIMMITSGTMTHRMKRLEARGLIERLPNPEDARSQLVKLSQTGFEIINKAATAHVDN 140
Query: 124 VKDALAILSDEDKETLISILKK 145
++ LA L+D K+ L LK+
Sbjct: 141 MESLLAGLNDTKKKELDVKLKE 162
>gi|69938897|ref|ZP_00633248.1| regulatory protein, MarR [Paracoccus denitrificans PD1222]
gi|119387768|ref|YP_918802.1| transcriptional regulator, MarR family [Paracoccus denitrificans
PD1222]
gi|119378343|gb|ABL73106.1| transcriptional regulator, MarR family [Paracoccus denitrificans
PD1222]
Length = 172
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 45 PTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSY 101
PT +++L T+ G +M +L+ ++ +SG ++ +++ + RDGL+ R++D D R
Sbjct: 62 PT-YAILATIRVSGPPYRMTPSELLSAIVISSGGLSNLLRKLERDGLVQRSADKRDGRGV 120
Query: 102 LIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISIL 143
++EL++KG L +E H ++ +A LS +D E++ +L
Sbjct: 121 IVELTEKGIALTDESMAAHAALERELIAALSPQDCESMARML 162
>gi|33596921|ref|NP_884564.1| MarR-family transcriptional regulator [Bordetella parapertussis
12822]
gi|33566372|emb|CAE37617.1| MarR-family transcriptional regulator [Bordetella parapertussis]
Length = 161
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+ R+A + +I Q+ I ++KLT QF VL L +G + D++ + VI+
Sbjct: 24 LLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIE 83
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ L++ + DP DRR L+ L+ G+ L+EE+ P + L+ ++ ++
Sbjct: 84 RLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVY 143
Query: 142 ILKKYKN 148
+L+K +
Sbjct: 144 LLRKMSD 150
>gi|33600756|ref|NP_888316.1| MarR-family transcriptional regulator [Bordetella bronchiseptica
RB50]
gi|33568356|emb|CAE32268.1| MarR-family transcriptional regulator [Bordetella bronchiseptica
RB50]
Length = 161
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+ R+A + +I Q+ I ++KLT QF VL L +G + D++ + VI+
Sbjct: 24 LLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIE 83
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ L++ + DP DRR L+ L+ G+ L+EE+ P + L+ ++ ++
Sbjct: 84 RLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVY 143
Query: 142 ILKKYKN 148
+L+K +
Sbjct: 144 LLRKMSD 150
>gi|111219617|ref|YP_710411.1| Putative MarR-family transcriptional regulator [Frankia alni
ACN14a]
gi|111147149|emb|CAJ58796.1| Putative MarR-family transcriptional regulator [Frankia alni
ACN14a]
Length = 204
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 28 RTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDG 87
R R + Q + ++LTPTQ S L +L G M + ++ H +MT VI ++ G
Sbjct: 82 RLSRRMRQE--RSSQLTPTQTSALASLERHGPMTLGEIAAHERVQPPSMTRVIAHLAVAG 139
Query: 88 LISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
L+ R P D R + E++ KG+ L+ + + + D LA LS E+ L
Sbjct: 140 LVERRPHPTDGRQVIAEVTAKGRSLLSDDRRRRDEWLTDRLAALSAEEIAAL 191
>gi|83745958|ref|ZP_00943014.1| Transcriptional regulator, MarR family [Ralstonia solanacearum
UW551]
gi|83727352|gb|EAP74474.1| Transcriptional regulator, MarR family [Ralstonia solanacearum
UW551]
Length = 164
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGK---MRIQDLIDHMLATSGNMTV 78
V+R ER + + + + L F VL TL +G+ + L ML ++ MT
Sbjct: 33 VWRAGERLRQGVVANIAGAD-LDTAGFDVLLTLRRQGRGNALSPSALAKDMLLSTSAMTN 91
Query: 79 VIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKET 138
+ + + GLI+R +DP+DRR I L++ G L++ + H+ + LA LS +++E
Sbjct: 92 RLDRLEKRGLIARQTDPDDRRGLRIVLTEAGFTLVDNLVASHLATEERMLAALSAKEREQ 151
Query: 139 LISILKKYK 147
L ++L K +
Sbjct: 152 LRALLTKIR 160
>gi|52079103|ref|YP_077894.1| probable transcriptional regulator YwaE [Bacillus licheniformis
ATCC 14580]
gi|52784469|ref|YP_090298.1| YwaE [Bacillus licheniformis ATCC 14580]
gi|52002314|gb|AAU22256.1| probable transcriptional regulator YwaE [Bacillus licheniformis
ATCC 14580]
gi|52346971|gb|AAU39605.1| YwaE [Bacillus licheniformis DSM 13]
Length = 168
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 67/124 (54%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
++R A++ +E V+ +L+ T FS+L L+ G++ + L + ++ + VIK
Sbjct: 37 LYRSAQKLRVKMETEVLSSYQLSWTAFSILYDLWVWGRLETRKLAELSGISTATASNVIK 96
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
+ + +++DP DRR E++ +G+ IEE++P + ++ E++ TLI
Sbjct: 97 TLEKKNFCVKSADPRDRRHVYAEITPEGKAAIEELYPAFHKGETMLIKGMTKEEQNTLIE 156
Query: 142 ILKK 145
+L+K
Sbjct: 157 LLRK 160
>gi|145623170|ref|ZP_01779113.1| transcriptional regulator, TrmB [Petrotoga mobilis SJ95]
gi|144946443|gb|EDJ81492.1| transcriptional regulator, TrmB [Petrotoga mobilis SJ95]
Length = 145
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 67/129 (51%)
Query: 12 ENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLA 71
EN ++ + R+ ++S ++V+KE ++P QF VL+T+Y KG + D+ +
Sbjct: 2 ENNPSIQMEKMIREICSKVKSEGRKVLKEFNISPAQFDVLQTVYFKGPKMLSDISKRLGV 61
Query: 72 TSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAIL 131
T T +I+ + G + R D+R Y+++++Q G +IE + ++ ++ L
Sbjct: 62 TKSTTTGLIRRLEIAGYLVREKSKKDKRVYVVQITQDGTNIIENVIKNRVILMEKVYEKL 121
Query: 132 SDEDKETLI 140
++++ I
Sbjct: 122 GEKERSVEI 130
>gi|118732262|ref|ZP_01580776.1| transcriptional regulator, MarR family [Delftia acidovorans SPH-1]
gi|118667609|gb|EAV74205.1| transcriptional regulator, MarR family [Delftia acidovorans SPH-1]
Length = 146
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 74/140 (52%)
Query: 6 LEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDL 65
++ L++N L + R A T+R + + L P++F+VL + + + +
Sbjct: 1 MKSALQQNFLMQQLGHCTRLAHATVRPHYAKHMLALDLKPSEFAVLSLISANPGASQRQI 60
Query: 66 IDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVK 125
+ ++ + NM +++ + GL+ R +DP DRR L+ L+ +G+ L EE Q + +
Sbjct: 61 AETVMISQPNMAALMERLQVRGLLRREADPADRRLSLLYLTAEGERLHEEAAAQVEILEQ 120
Query: 126 DALAILSDEDKETLISILKK 145
+A +LS EDK+ L+ +L K
Sbjct: 121 EASRMLSAEDKQQLLRLLHK 140
>gi|21221571|ref|NP_627350.1| MarR-family regulator [Streptomyces coelicolor A3(2)]
gi|8894766|emb|CAB95926.1| putative MarR-family regulator [Streptomyces coelicolor A3(2)]
Length = 165
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR---VIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD++ + V + R R +++ E+ L P +F VL L G ++
Sbjct: 15 ERPDLDVEPLEVLSRVSRLARHLDRARRLAFSEHNLEPWEFDVLTALRRAGTPYQLSPGQ 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ L TSG MT I + + GL+ R DP+DRR L+ L+ +G++ ++ +
Sbjct: 75 LLTQTLVTSGTMTNRIDRLAKKGLVERLPDPSDRRGVLVRLTDEGRDRADQSLAGLLAQE 134
Query: 125 KDALAILSDEDKETLISILKK 145
+ L LS + L ++L++
Sbjct: 135 RAILGELSRAQRTELAALLRQ 155
>gi|52081341|ref|YP_080132.1| probable transcriptional regulator YsmB [Bacillus licheniformis
ATCC 14580]
gi|52786719|ref|YP_092548.1| YsmB [Bacillus licheniformis ATCC 14580]
gi|52004552|gb|AAU24494.1| probable transcriptional regulator YsmB [Bacillus licheniformis
ATCC 14580]
gi|52349221|gb|AAU41855.1| YsmB [Bacillus licheniformis DSM 13]
Length = 147
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
I+ + ++ + +TP QF L+ LY G M I +L M T +I M ++ L+
Sbjct: 24 IKQKGREILTQYTITPPQFVGLQWLYEYGDMTIGELSQKMYLACSTTTDLIDRMEKNNLV 83
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYK 147
R DP+DRR I L +G+ +I+E+ + ++D L S+E+ +L K +
Sbjct: 84 ERVKDPSDRRVVRIHLLSEGERIIQEVIQKRQDYLEDMLEAFSEEETAAFEKLLIKLQ 141
>gi|89055996|ref|YP_511447.1| transcriptional regulator, MarR family [Jannaschia sp. CCS1]
gi|88865545|gb|ABD56422.1| transcriptional regulator MarR family [Jannaschia sp. CCS1]
Length = 145
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 20 MIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVV 79
M + R E + I ++ E +T Q+ VL L G + L D ++T +
Sbjct: 14 MALIRAREGVMAPIRD-MLSETGITEQQWRVLRVLSENGPLDATSLADRASLLFPSLTRI 72
Query: 80 IKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
M GLI++T D DRR + I +++ GQ++I++ Q V D A L ++D ETL
Sbjct: 73 ATKMRDKGLITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADIRATLGEDDYETL 132
Query: 140 ISILKK 145
+ +L K
Sbjct: 133 LDLLAK 138
>gi|148253920|ref|YP_001238505.1| putative transcriptional regulatory protein, MarR family
[Bradyrhizobium sp. BTAi1]
gi|146406093|gb|ABQ34599.1| putative transcriptional regulatory protein, MarR family
[Bradyrhizobium sp. BTAi1]
Length = 174
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
LD + + R+ + I R I N LTPTQ++ L L G L
Sbjct: 43 LDDQIGFILRQVWQRHTMIFARDIGSN-LTPTQWAALSKLVETGPCSQNQLGRLTAMDVA 101
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
+ VI + GL ++DP D R L+ L++ GQ+L E+ P + K+ LA L +
Sbjct: 102 TIKGVIDRLTARGLTETSADPQDGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAK 161
Query: 135 DKETLISILKKYK 147
++ETL+ +L + +
Sbjct: 162 ERETLLGLLSRLR 174
>gi|89206182|ref|ZP_01184744.1| regulatory protein, MarR [Bacillus weihenstephanensis KBAB4]
gi|89155906|gb|EAR75912.1| regulatory protein, MarR [Bacillus weihenstephanensis KBAB4]
Length = 155
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
++ + LTP QF +L+ L G R L + M +TV+ ++ GL+ R D ND
Sbjct: 30 MQASGLTPPQFYILKILDHYGASRATQLAEKMYVKPSAITVMTDRLIDHGLVERYHDDND 89
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
RR +IEL++KG+ +EE + + L +++E L+ + +K + +
Sbjct: 90 RRVVVIELTKKGKTTVEEAMAARNEHIAKYFSHLELQEREDLLRLFEKLETI 141
>gi|77963569|ref|ZP_00827378.1| COG1846: Transcriptional regulators [Yersinia mollaretii ATCC
43969]
Length = 167
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 32 SIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM--VRDGLI 89
SI ++ + ++ +F +L +LY +G+ +L + ++V++K M V + LI
Sbjct: 46 SIYAQLADKYDISEGKFILLMSLYGEGETAASELALRIGVAPATVSVMVKRMLSVPEPLI 105
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+ T D RS LI LS G +I+E P HI ++ +L D+++E+LIS+L+K
Sbjct: 106 TMTRTHADGRSRLIALSPAGYRVIKEALPGHINAIRSFAEVLDDQERESLISMLRK 161
>gi|84385668|ref|ZP_00988699.1| Transcriptional regulator [Vibrio splendidus 12B01]
gi|84379648|gb|EAP96500.1| Transcriptional regulator [Vibrio splendidus 12B01]
Length = 138
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G +R+++L + + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYSLAQVHTIEVLGMHGALRMKELAEKLGITTGTLTVQIEKLVKAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R P DRR+ ++ L+ +GQ++ H+ V + +++K L+ L K
Sbjct: 78 ERHEHPTDRRAIVVALTDEGQKIHVHHNQLHLNLVSGLTQDIEEDEKAVLLKCLTK 133
>gi|148975977|ref|ZP_01812766.1| transcriptional regulator [Vibrionales bacterium SWAT-3]
gi|145964722|gb|EDK29975.1| transcriptional regulator [Vibrionales bacterium SWAT-3]
Length = 138
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 63/116 (54%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
+ S EQ V+KE + Q +E L G +R+++L + + T+G +TV I+ +V+ LI
Sbjct: 18 MSSWEQSVVKETGYSLAQVHTIEVLGMHGALRMKELAEKLGITTGTLTVQIEKLVKAELI 77
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
R P DRR+ ++ L+ +G+++ H+ V + + ++DK L+ L +
Sbjct: 78 ERHQHPTDRRAIVVALTDEGRKIHVHHNQLHLNLVNELTQGIEEQDKAVLLKCLTQ 133
>gi|29830114|ref|NP_824748.1| MarR-family transcriptional regulator [Streptomyces avermitilis
MA-4680]
gi|29607224|dbj|BAC71283.1| putative MarR-family transcriptional regulator [Streptomyces
avermitilis MA-4680]
Length = 165
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR---VIKENKLTPTQFSVLETLYSKG---KMRIQD 64
E LD++ + V + R R +++ E+ L P +F VL +L G ++
Sbjct: 15 ERPDLDVEPLEVLSRVSRLARHLDRARRLAFSEHSLEPWEFDVLTSLRRAGAPYQLSPGQ 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ L TSG MT I + + L+ R DP+DRR L+ L+++G++ ++ +
Sbjct: 75 LLTQTLVTSGTMTNRIDRLAKKSLVERLPDPSDRRGVLVRLTEEGRDRADQALAGLLDQE 134
Query: 125 KDALAILSDEDKETLISILKK 145
+ LA LS + L ++L++
Sbjct: 135 RAILAELSRAQRAELAALLRQ 155
>gi|118466014|ref|YP_879357.1| transcriptional regulator, MarR family protein [Mycobacterium avium
104]
gi|118167301|gb|ABK68198.1| transcriptional regulator, MarR family protein [Mycobacterium avium
104]
Length = 167
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LT Q S+L TL +G +R+ DL H + TV I+ + + GL+ R+ DP+D R+ L
Sbjct: 42 LTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKVGLVKRSRDPSDLRAVL 101
Query: 103 IELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNLS 150
++++ +G+ + E + L+ L D +TL+ L + L+
Sbjct: 102 VDITPRGRAVHGESLANRRAALAAMLSQLPASDLDTLMKALAPLERLA 149
>gi|154686975|ref|YP_001422136.1| YsmB [Bacillus amyloliquefaciens FZB42]
gi|154352826|gb|ABS74905.1| YsmB [Bacillus amyloliquefaciens FZB42]
Length = 146
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 23 FRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKN 82
R I+ + ++ + +TP QF L+ LY G M I +L M T +I
Sbjct: 16 LRHIAAIIKQKGREILNQYAITPPQFVGLQWLYELGDMTIGELSGKMYLACSTTTDLIDR 75
Query: 83 MVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDED 135
M ++ L+ R DP DRR I L +G+ +I+E+ + ++D A S+E+
Sbjct: 76 MEKNKLVERVKDPADRRVVRIHLLAEGERIIQEVILKRQAYLRDMFATFSEEE 128
>gi|150381387|ref|ZP_01920393.1| transcriptional regulator, MarR family [Shewanella sediminis
HAW-EB3]
gi|150253473|gb|EDM91182.1| transcriptional regulator, MarR family [Shewanella sediminis
HAW-EB3]
Length = 167
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQD 64
E+ +LD M + + R + +E ++ K LT +F VL TL G + +
Sbjct: 18 EKPELDTLPMELIGRLMRIGKHLETQIAVFHKRYGLTLGEFDVLATLRRAGGDHCLTPSE 77
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
LI M+ TSG MT + + G I R DRRS + L+ +G LI+E+ +H+
Sbjct: 78 LIATMMLTSGAMTNRLDRLESKGQIVRVHSQKDRRSVSVALTGQGLALIDELIVEHVNIQ 137
Query: 125 KDALAILSDEDKETLISILK 144
+ +A L D DK L +LK
Sbjct: 138 QGLMASLGDADKPLLNGLLK 157
>gi|107022753|ref|YP_621080.1| transcriptional regulator, MarR family [Burkholderia cenocepacia AU
1054]
gi|116689702|ref|YP_835325.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
HI2424]
gi|105892942|gb|ABF76107.1| transcriptional regulator, MarR family [Burkholderia cenocepacia AU
1054]
gi|116647791|gb|ABK08432.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
HI2424]
Length = 176
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQR----VIKENKLTPTQFSVLETLYSKGK---MRIQ 63
E LD +M+V + + I + + + P +F VL TL G +
Sbjct: 14 ERPDLDATSMVVMGRLQEAALVIARDRLNPLFARYGMQPGEFDVLATLRRSGAPYALTPT 73
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L D +L +SG MT I + + G + R +P D R L+ L+ G+ LI+E HI
Sbjct: 74 ALYDALLMSSGGMTARIDRLQKAGWVERRPNPADGRGTLVALTDAGRALIDEAVVAHIDN 133
Query: 124 VKDALAILSDEDKETL 139
++ LA LS ++ L
Sbjct: 134 QREVLAALSAAEQAQL 149
>gi|46581203|ref|YP_012011.1| transcriptional regulator, MarR family [Desulfovibrio vulgaris
subsp. vulgaris str. Hildenborough]
gi|46450624|gb|AAS97271.1| transcriptional regulator, MarR family [Desulfovibrio vulgaris
subsp. vulgaris str. Hildenborough]
Length = 138
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 32 SIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISR 91
S EQ V++E+ +T Q LE L G +R+++L + + T+G +TV++ + R GL++R
Sbjct: 20 SWEQGVVRESGITLPQMHTLEVLGVAGDLRMKELAEKLGVTTGALTVLVDRLERAGLVAR 79
Query: 92 TSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKD 126
+ DRRS + L+ G+ EE H +D
Sbjct: 80 KPNERDRRSIQVGLTVDGRRYFEEHHKLHCQLSED 114
>gi|110602387|ref|ZP_01390490.1| regulatory protein, MarR [Geobacter sp. FRC-32]
gi|110546903|gb|EAT60226.1| regulatory protein, MarR [Geobacter sp. FRC-32]
Length = 148
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 67/125 (53%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSG 74
L L T +A ++ R + LT +QF VLE LY KG + +DL +L ++G
Sbjct: 10 LSLNTYTKLMRAAESVTVRVNRHMSAADLTISQFGVLEALYHKGPLCQRDLAAKILKSTG 69
Query: 75 NMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDE 134
N+T+VI N+ + L+ R D DRR I L+ +G LI E+F + ++ LS++
Sbjct: 70 NITMVIDNLEKRHLVRRERDSEDRRYLTIYLTDEGTALIAEVFTAVEAAIVKEMSELSEK 129
Query: 135 DKETL 139
++E L
Sbjct: 130 EQEQL 134
>gi|118590211|ref|ZP_01547614.1| regulatory protein (MarR-family) [Stappia aggregata IAM 12614]
gi|118437183|gb|EAV43821.1| regulatory protein (MarR-family) [Stappia aggregata IAM 12614]
Length = 184
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 40 ENKLTPTQFSVLETLYSKG---KMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPN 96
E L +F VL TL G K+ +L + +SG MT + + + GL+ R P+
Sbjct: 64 EIGLKTGEFDVLATLVRSGPPYKLTPTELYRTTMMSSGGMTARVDKLEKAGLVERCPHPD 123
Query: 97 DRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
DRR+ + L++KG +LI++ P +I + A++ L++E++ L +L+K
Sbjct: 124 DRRALSVCLTEKGLKLIKDQMPDYIETQQRAVSGLTEEEQRHLSDLLEK 172
>gi|29831936|ref|NP_826570.1| MarR-family transcriptional regulator [Streptomyces avermitilis
MA-4680]
gi|29609053|dbj|BAC73105.1| putative MarR-family transcriptional regulator [Streptomyces
avermitilis MA-4680]
Length = 176
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKGK---MRIQDLIDH 68
LD M VF + R R++ R+ K + ++ +F VL TL G+ + + L
Sbjct: 28 LDTAAMEVFGRVFRLSRTMGDRMEKAYERFGISRGEFDVLATLRRSGEPYTLSPRQLSAT 87
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
++ T+G MT + + R GL+ R+ DP+DRR + L+ +G LI+E + +AL
Sbjct: 88 LMLTTGGMTGRLDKLERAGLLRRSPDPHDRRGLQVTLTDEGFRLIDEAVEAGLAVQTEAL 147
Query: 129 AILSDEDKETLISILKK 145
L + L +L++
Sbjct: 148 DALDAQQAGQLADLLRQ 164
>gi|138896234|ref|YP_001126687.1| Transcriptional regulator [Geobacillus thermodenitrificans NG80-2]
gi|134267747|gb|ABO67942.1| Transcriptional regulator [Geobacillus thermodenitrificans NG80-2]
Length = 147
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 35 QRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSD 94
+ ++ +TP QF L+ L +G + + +L + M T +I M R+GL+SR D
Sbjct: 29 REILTNYPITPPQFVALQWLLEEGDLTVGELSNKMYLACSTTTDLIDRMERNGLVSRVRD 88
Query: 95 PNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
+DRR I L +KG+ +IEE+ + + L SDE+ L L+K
Sbjct: 89 EHDRRVVRIHLLEKGERIIEEVIEKRQRDLARVLENFSDEEIVFLERCLRK 139
>gi|120601565|ref|YP_965965.1| transcriptional regulator, MarR family [Desulfovibrio vulgaris
subsp. vulgaris DP4]
gi|120561794|gb|ABM27538.1| transcriptional regulator, MarR family [Desulfovibrio vulgaris
subsp. vulgaris DP4]
Length = 140
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 32 SIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISR 91
S EQ V++E+ +T Q LE L G +R+++L + + T+G +TV++ + R GL++R
Sbjct: 22 SWEQGVVRESGITLPQMHTLEVLGVAGDLRMKELAEKLGVTTGALTVLVDRLERAGLVAR 81
Query: 92 TSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKD 126
+ DRRS + L+ G+ EE H +D
Sbjct: 82 KPNERDRRSIQVGLTVDGRRYFEEHHKLHCQLSED 116
>gi|78063406|ref|YP_373314.1| transcriptional regulator, MarR family [Burkholderia sp. 383]
gi|77971291|gb|ABB12670.1| transcriptional regulator, MarR family [Burkholderia sp. 383]
Length = 155
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM 83
++A R + I V++ LT QFS+L +L ++ + + +T +K +
Sbjct: 25 QRAARNLARIFDDVLRPLDLTNGQFSLLMSLNRPQPAPMKSVASLLAMDRTTLTAALKPL 84
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
R GL++ DP+DRRS L+EL+ G +L+ E FP
Sbjct: 85 ERRGLVTIIQDPDDRRSRLLELTPAGHDLLAEAFP 119
>gi|126436021|ref|YP_001071712.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
gi|126235821|gb|ABN99221.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
Length = 155
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 47 QFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELS 106
Q +L T+ +G+ RI DL + MT ++ + GL+SRT+DP D R+ LI ++
Sbjct: 47 QARLLSTIEDQGEARISDLATLDRCSQPTMTTQVRRLEDAGLVSRTTDPLDARAVLIRIT 106
Query: 107 QKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
KG+ ++ + + LA LS ED++TL
Sbjct: 107 DKGRTVLAQARIDRAAVIDPRLAQLSPEDRQTL 139
>gi|27366768|ref|NP_762295.1| Transcriptional regulator [Vibrio vulnificus CMCP6]
gi|37676479|ref|NP_936875.1| transcriptional regulator [Vibrio vulnificus YJ016]
gi|27358335|gb|AAO07285.1|AE016809_47 Transcriptional regulator [Vibrio vulnificus CMCP6]
gi|37201021|dbj|BAC96845.1| transcriptional regulator [Vibrio vulnificus YJ016]
Length = 161
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENK---LTPTQFSVLETLYSKG---KMRIQD 64
E +LD + M + + R + +E V + +K L +F V+ TL G ++ +
Sbjct: 15 ERPELDTEPMAIMGRVFRITKYLESAVGEVHKRYDLKMGEFDVVATLRRSGAPYRLTPSE 74
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ ++ TSG MT + + + GLISR DRRS +EL++ G + ++ +H+
Sbjct: 75 LLGSLMLTSGAMTNRLDKLEQKGLISRQHSKEDRRSVTVELTEHGLVTVNKLIEEHVAIQ 134
Query: 125 KDALAILSDEDKETLISILKKY 146
L LS K+ L ++LK++
Sbjct: 135 HALLKNLSQPQKQALNAVLKEW 156
>gi|116250052|ref|YP_765890.1| putative MarR family transcriptional regulator [Rhizobium
leguminosarum bv. viciae 3841]
gi|115254700|emb|CAK05774.1| putative MarR family transcriptional regulator [Rhizobium
leguminosarum bv. viciae 3841]
Length = 166
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 11 EENKLDLKTMIVFRKAERTI----RSIEQRVIKENKLTPTQFSVLETLYSKG---KMRIQ 63
E LD++ M + + +R R +E ++K+ L+ + F VL TL G ++
Sbjct: 20 ERPDLDVEPMGILGRLKRLSTHLGREVEAVLMKQG-LSSSAFDVLATLRRAGAPHRLSPG 78
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
+L++ + +SG MT I + + G + R +P DRRS LI L++KG +E H++
Sbjct: 79 ELLEMTMVSSGTMTNRIDQLEKAGYVERILNPEDRRSVLIALTEKGLATVETAVDAHVVN 138
Query: 124 VKDALAILSDEDKETLISILKKY 146
LS DK L +L+K+
Sbjct: 139 QHRLSKNLSAADKAELDRLLRKF 161
>gi|52079813|ref|YP_078604.1| repressor of ohrA - OhrR [Bacillus licheniformis ATCC 14580]
gi|52785183|ref|YP_091012.1| YkmA [Bacillus licheniformis ATCC 14580]
gi|52003024|gb|AAU22966.1| repressor of ohrA - OhrR [Bacillus licheniformis ATCC 14580]
gi|52347685|gb|AAU40319.1| YkmA [Bacillus licheniformis DSM 13]
Length = 150
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHM 69
E +LD + + + R + + + ++ E +T Q+ L L+ G++ ++ + +
Sbjct: 5 FEHMRLDRQLCFLLYASSREMTKLYKPLLDELNITYPQYLALLLLWEHGELSVKTMGKLL 64
Query: 70 LATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEI--FPQHILCVKDA 127
SG +T ++K M + GL++R P D RS ++ L+ GQ L E+ PQH++ D
Sbjct: 65 YLDSGTLTPMLKRMEQHGLLTRERSPEDERSVIVRLTAGGQALQEKASSIPQHMIAQTDL 124
Query: 128 LAILSDEDKETLISIL 143
A K+TL S+L
Sbjct: 125 SAGELKNLKQTLESLL 140
>gi|108798646|ref|YP_638843.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119867743|ref|YP_937695.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
gi|126434244|ref|YP_001069935.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
gi|108769065|gb|ABG07787.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119693832|gb|ABL90905.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
gi|126234044|gb|ABN97444.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
Length = 172
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 43 LTPTQFSVLETL-YSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSY 101
L+ +QF+VL L + G M + L D + ++T V+ + + G ++R +P DRRS
Sbjct: 54 LSMSQFNVLTVLKRADGPMTMGALADSISVRQASLTSVVDTLTKAGFVTRKVNPRDRRSV 113
Query: 102 LIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKK 145
++ +S+KG + + E P H ++ A ++ ++ L++ L +
Sbjct: 114 VVAISKKGDQFMTEFLPGHYDFLQRLFAGINPRHRQQLLARLNE 157
>gi|37522065|ref|NP_925442.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
gi|35213064|dbj|BAC90437.1| MarR family transcriptional regulatory protein [Gloeobacter
violaceus PCC 7421]
Length = 181
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 43 LTPTQFSVLETL---YSKGK--MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
LT Q VL L Y G+ M + ++ + + T NMT ++ + RDGL+ R +DP D
Sbjct: 51 LTGPQVGVLRILSHYYEHGRDGMPLSEIGECLAVTKANMTGMVDRLERDGLVVRENDPTD 110
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILKKYKNL 149
RR + L+ K EL P + + + +A+L +KE L+ L K + +
Sbjct: 111 RRIKRVRLTPKAHELHARFKPGLLQYLTELMAVLGASEKEQLLDSLGKLRRV 162
>gi|114571237|ref|YP_757917.1| transcriptional regulator, MarR family [Maricaulis maris MCS10]
gi|114341699|gb|ABI66979.1| transcriptional regulator, MarR family [Maricaulis maris MCS10]
Length = 157
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETL-YSKGKMRIQDLIDHMLATSGNMTVVI 80
++R R + R +E ++ ++F L L ++ + + +L + +L T+GN+T +I
Sbjct: 22 LYRPTALIERELRTRFQREFGVSLSRFDALAALDRAETGLLMGELSERLLVTNGNVTGLI 81
Query: 81 KNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
MV DGL++RT+ DRR + +EL++ G+ + H + D A L E +L
Sbjct: 82 SRMVADGLVTRTASEQDRRRFRVELTEAGRATFTIMAKAHAGWLADIFADLPGEAAASL 140
>gi|108800398|ref|YP_640595.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119869527|ref|YP_939479.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
gi|108770817|gb|ABG09539.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119695616|gb|ABL92689.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
Length = 155
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 47 QFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELS 106
Q +L T+ +G+ RI DL + MT ++ + GL+SRT+DP D R+ LI ++
Sbjct: 47 QARLLSTIEDQGEARISDLATLDRCSQPTMTTQVRRLEDAGLVSRTTDPLDARAVLIRIT 106
Query: 107 QKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
KG+ ++ + + LA LS ED++TL
Sbjct: 107 DKGRTVLTQARIDRAAVIDPRLAQLSPEDRQTL 139
>gi|118712455|ref|ZP_01565025.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
MC0-3]
gi|118649907|gb|EAV56702.1| transcriptional regulator, MarR family [Burkholderia cenocepacia
MC0-3]
Length = 158
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 24 RKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNM 83
++A R + I V++ LT QFS+L +L ++ + + +T +K +
Sbjct: 28 QRAARNLARIFDDVLRPLDLTNGQFSLLMSLNRPQPAPMKSVASLLAMDRTTLTAALKPL 87
Query: 84 VRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFP 118
R GL++ DP+DRRS L+EL+ G EL+ + FP
Sbjct: 88 ERRGLVTIAQDPDDRRSRLLELTPAGHELLAKAFP 122
>gi|111219565|ref|YP_710359.1| putative transcription regulator protein [Frankia alni ACN14a]
gi|111147097|emb|CAJ58743.1| putative transcription regulator protein [Frankia alni ACN14a]
Length = 156
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 43 LTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYL 102
LT +F VL+ L G R++DL D + MT + + DGL++R S P DRR+ L
Sbjct: 35 LTLRRFKVLQLLADTGPCRLRDLADAVAVAPRTMTETVDGLESDGLVARRSHPTDRRAVL 94
Query: 103 IELSQKGQELI 113
+ L+ G+E +
Sbjct: 95 LALTPAGREAL 105
>gi|83646317|ref|YP_434752.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83634360|gb|ABC30327.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 169
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 10 LEENKLDLKTMIVFRKAERTIRSIEQRV---IKENKLTPTQFSVLETLYSKGK---MRIQ 63
+E LD+ M + +R +++R+ + +T +F VL TL GK +
Sbjct: 19 VERPDLDVTPMGSIGRLKRCAALMQRRLDATFSQFDMTGWEFDVLATLRRSGKPYCLAPT 78
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L ++ TSG MT ++ + GLI RT++ D RS L++L+ KG ELI+ H+
Sbjct: 79 ALFSTLMITSGAMTHRLQRLEASGLIERTANKEDARSKLVQLTPKGLELIDRAVDAHVQN 138
Query: 124 VKDALAILSDEDKETLISILKK 145
+ L L+ E+++ L +++
Sbjct: 139 EHNILQPLNPEERQQLDECMRR 160
>gi|119859776|ref|ZP_01641187.1| transcriptional regulator, MarR family [Pseudomonas putida W619]
gi|119813941|gb|EAX16706.1| transcriptional regulator, MarR family [Pseudomonas putida W619]
Length = 168
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 15 LDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQDLIDH 68
+D+ +M +F + R + +E+ + + +F VL TL G ++ +L
Sbjct: 19 VDVTSMEIFGRMARIQKHLERMRAEALAQYGFKEGEFDVLATLRRAGAPYRLTPTELYRS 78
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
+L TSG MT + + G++ R +D +D+RSY + L+ G+ LIE+ H + L
Sbjct: 79 LLITSGAMTNRLARLESAGMVERIADDHDKRSYQVALTAAGKVLIEKALLTHTEIQELVL 138
Query: 129 AILSDEDKETLISILKK 145
A LS + + +LK+
Sbjct: 139 APLSAKQRAGFAQLLKQ 155
>gi|89098911|ref|ZP_01171791.1| hypothetical protein B14911_06076 [Bacillus sp. NRRL B-14911]
gi|89086315|gb|EAR65436.1| hypothetical protein B14911_06076 [Bacillus sp. NRRL B-14911]
Length = 161
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 30 IRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLI 89
I+ + ++ +TP QF L+ L+ +G M I +L + M T ++ M ++ L+
Sbjct: 38 IKQKGREILSNYTITPPQFVALQWLHEEGDMTIGELSNKMYLAFSTTTDLVDRMEKNELV 97
Query: 90 SRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETL 139
R DPNDRR I L +G+ +IEE+ + + +++ L S ++ L
Sbjct: 98 QRVKDPNDRRVVRIHLLPEGERIIEEVIVKRQIYLREVLKNFSKDEVTVL 147
>gi|124514964|gb|EAY56475.1| Transcriptional regulator [Leptospirillum sp. Group II UBA]
Length = 181
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 4 KTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQ 63
K E EE + +K M +F + ++ + TP + +L LY G M +
Sbjct: 7 KEEESPWEEYPIRIKLMKLFWMLGPAFVRWAESQMEMDGYTPQRMYLLGNLYEYGPMMMS 66
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
L D + T+ N+T + + R+G++ R P+DRR +I L+ + +E I ++ +
Sbjct: 67 ALKDRLGVTATNITAHVDALEREGMVERVPLPSDRRVTIISLTPQAEESIRKLCSPFMNR 126
Query: 124 VKDALAILSDEDKETLISILKKYK 147
V + E++ET +S L + +
Sbjct: 127 VASIFDTFTPEEQETFLSCLLRMR 150
>gi|117927255|ref|YP_871806.1| transcriptional regulator, MarR family [Acidothermus cellulolyticus
11B]
gi|117647718|gb|ABK51820.1| transcriptional regulator, MarR family [Acidothermus cellulolyticus
11B]
Length = 193
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 36 RVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDP 95
R I + T SVL+TL +G +RI DL+ + MT + + GL+ R DP
Sbjct: 21 RTITPRPESATALSVLDTLDREGPLRISDLVTREHISQPGMTQLACRLEHSGLVRRLGDP 80
Query: 96 NDRRSYLIELSQKGQELIEEIFPQ 119
DRR+ ++E+++ G+ ++ E Q
Sbjct: 81 VDRRATVVEITRDGRNVLHEFRTQ 104
>gi|56550950|ref|YP_161789.1| MarR family transcriptional regulator [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56542524|gb|AAV88678.1| MarR family transcriptional regulator [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 169
Score = 52.4 bits (124), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 KLDLKTMIVFRKAERTIRSIEQ---RVIKENKLTPTQFSVLETLYSKG---KMRIQDLID 67
+LD +M +F + R + +E+ + + +F VL TL G ++ +L
Sbjct: 18 ELDASSMEIFGRMIRVQKHLERLRSEALSQYGFKEGEFDVLATLRRSGSPYRLTPTELYR 77
Query: 68 HMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDA 127
+L TSG MT + + G+I R +D D+RS + L++KG+ LIE+ H
Sbjct: 78 SLLITSGAMTNRLVRLESAGMIERIADSQDKRSSQVALTEKGKALIEQAVKTHTEVQNGV 137
Query: 128 LAILSDEDKETLISILKK 145
L L E ++ L +LKK
Sbjct: 138 LDGLEPEQRQILAGLLKK 155
>gi|52144492|ref|YP_082336.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|51977961|gb|AAU19511.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
Length = 167
Score = 52.4 bits (124), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 28 RTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQ--DLIDHMLATSGNMTVVIKNMVR 85
+ + + +R L+ +F +L L+ + +L T +T ++ +VR
Sbjct: 38 KKMNHVMERYFAGRGLSEGKFKILMLLFDAKDHSLSPTELAKQSNVTKATITGLLDGLVR 97
Query: 86 DGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISIL 143
DG +SRT D+R IEL+++G+E +++ P H + + SDE+KE I+IL
Sbjct: 98 DGFVSRTHQNKDKRKISIELTKEGKEQLKQFLPGHFSKISAVMENYSDEEKEMFINIL 155
>gi|114564795|ref|YP_752309.1| transcriptional regulator, MarR family protein [Shewanella
frigidimarina NCIMB 400]
gi|114336088|gb|ABI73470.1| transcriptional regulator, MarR family protein [Shewanella
frigidimarina NCIMB 400]
Length = 163
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 15 LDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKGK---MRIQDLIDH 68
LD + M + + R + IE + K+ LT +F VL TL GK + L+
Sbjct: 18 LDTEPMAILGRFLRLQKHIEAEISACHKQFDLTMGEFDVLATLRRNGKPYTLTPSKLLSS 77
Query: 69 MLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDAL 128
M+ TSG MT + + LI+R DRRS + L+ KG +I+E +H+ +
Sbjct: 78 MMLTSGAMTNRLDKLESKDLIARVHSTEDRRSVSVALTNKGLAIIDEAIEEHVRIQHKLV 137
Query: 129 AILSDEDKETLISILKKY 146
A LSD + L + K +
Sbjct: 138 ASLSDSELPELNQLFKTW 155
>gi|126730582|ref|ZP_01746392.1| transcriptional regulator, MarR family protein [Sagittula stellata
E-37]
gi|126708748|gb|EBA07804.1| transcriptional regulator, MarR family protein [Sagittula stellata
E-37]
Length = 152
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHML 70
+ N L +T+ + ++RS ++ ++ KLT Q+SVL + M ++
Sbjct: 10 DRNVLRPRTLYLLYITANSVRSELEQALRPFKLTGIQYSVLSMVDENDPMSSAEIARRFY 69
Query: 71 ATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAI 130
T M I ++ R L++R DP + R L+ L G+ L+EE P DA ++
Sbjct: 70 VTPQTMNETIISLERRDLLARVPDPANMRVRLVVLGDAGRTLLEECAPLVDRIETDAFSM 129
Query: 131 LSDEDKETL 139
L DED TL
Sbjct: 130 LGDEDLTTL 138
>gi|119776698|ref|YP_929438.1| transcriptional regulator, MarR family [Shewanella amazonensis
SB2B]
gi|119769198|gb|ABM01769.1| transcriptional regulator, MarR family [Shewanella amazonensis
SB2B]
Length = 164
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 11 EENKLDLKTMIVFRKAERTIRSIEQRVI---KENKLTPTQFSVLETLYSKG---KMRIQD 64
E+ +D +M + + R + +EQ + K L P +F VL TL G ++ D
Sbjct: 18 EKPDMDTLSMGIMGRLARLTKHLEQEITLCHKAYGLKPGEFDVLATLRRSGAPYRLTPSD 77
Query: 65 LIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCV 124
L+ M+ TSG MT + + G I+R DRRS + L+ KG + ++ +H+
Sbjct: 78 LLSAMMLTSGAMTNRLDRLEAKGFIAREHCQKDRRSVEVCLTPKGISTLAQVLSRHVETQ 137
Query: 125 KDALAILSDEDKETLISILKKY 146
L+ L +++ L +LK +
Sbjct: 138 NRVLSKLGRDEQLLLSRLLKDW 159
>gi|115377439|ref|ZP_01464642.1| MarR family transcriptional regulatory protein [Stigmatella
aurantiaca DW4/3-1]
gi|115365537|gb|EAU64569.1| MarR family transcriptional regulatory protein [Stigmatella
aurantiaca DW4/3-1]
Length = 179
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 64 DLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILC 123
+L +H + MT ++ + +DGLISR + P+DRR Y + L+ K ++ + P H
Sbjct: 87 ELAEHAGVSRATMTGLMDTLEKDGLISRENHPSDRRMYTVRLTPKAHAFLQGMLPDHYRR 146
Query: 124 VKDALAILSDEDKETLISILKK 145
+ ++ LS+ ++ TL +L K
Sbjct: 147 ISALMSPLSETERTTLQELLAK 168
>gi|148263202|ref|YP_001229908.1| transcriptional regulator, MarR family [Geobacter uraniumreducens
Rf4]
gi|146396702|gb|ABQ25335.1| transcriptional regulator, MarR family [Geobacter uraniumreducens
Rf4]
Length = 148
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 12 ENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLA 71
E KLD V K +++ R K +T Q+ VL L+ K + ++L + +
Sbjct: 2 EFKLDAPLGYVINKTALALKNELGRRFKPYDITVEQWRVLNRLWEKDGLTQKELAEQIFK 61
Query: 72 TSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAIL 131
N T ++ + G+I R + P+DRR+++I L+ +G+ L ++ P +D +
Sbjct: 62 DQPNTTRILDKLQNKGIIRREASPDDRRAFIINLTGEGRMLRAQLLPVACQMGEDVFTGI 121
Query: 132 SDEDKETLISILKK 145
S+E++ L +L K
Sbjct: 122 SEEEQLLLKVLLNK 135
>gi|147672127|ref|YP_001215125.1| transcriptional regulator, MarR family [Vibrio cholerae O395]
gi|146314510|gb|ABQ19050.1| transcriptional regulator, MarR family [Vibrio cholerae O395]
Length = 174
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGK--- 59
M+ EL E N L + + ++ R I + ++ LT +F VL TL G
Sbjct: 9 MEWANELPELNTLPMSVLHRLQRLARRIELKMEAFYQQAGLTAGEFEVLMTLRGVGHPYC 68
Query: 60 MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQ 119
+ DL +L +SG MT + + R GL+ R DRR+ + L++ G++ IE P+
Sbjct: 69 LNPSDLQVRLLLSSGAMTNRLTRLERKGLVERNLSRYDRRNVEVTLTESGRQRIELWLPE 128
Query: 120 HILCVKDALAILSDEDKETLISILKKY 146
+ LA S+ ++ETL + L+++
Sbjct: 129 YCDLQSSLLAKFSEVEQETLSTQLQEW 155
>gi|148557212|ref|YP_001264794.1| transcriptional regulator, MarR family [Sphingomonas wittichii RW1]
gi|148502402|gb|ABQ70656.1| transcriptional regulator, MarR family [Sphingomonas wittichii RW1]
Length = 152
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 38 IKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPND 97
+++ +T Q+ VL L +G + + L H L + T +IK+M GLI R DP +
Sbjct: 32 LRDAGVTDQQWRVLRALSDEGALDLGSLAAHALLHPPSATRIIKDMADRGLIQRAVDPAN 91
Query: 98 RRSYLIELSQKGQELIEEIFPQHILCVKDALA 129
+R +++L++ G++L+ + PQ I+ V D+ A
Sbjct: 92 KRRIILQLTEAGEDLVHDASPQ-IIDVLDSYA 122
>gi|147676355|ref|YP_001210570.1| transcriptional regulator [Pelotomaculum thermopropionicum SI]
gi|146272452|dbj|BAF58201.1| transcriptional regulator [Pelotomaculum thermopropionicum SI]
Length = 157
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 22 VFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIK 81
+ KA++ + + + +TP Q+ +L L+++ + + +T ++
Sbjct: 10 LLTKAQQAVLQYFRARLAAFDITPVQYGILSCLWAEDGQTPTQIAQKLCLDGSTITGILD 69
Query: 82 NMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLIS 141
M GL++RT DP DRR+ + L+++ L+E I +D L I SDE++ L +
Sbjct: 70 RMESKGLLTRTPDPEDRRAVRVVLTERSLRLMEPINEVISASNRDVLKIFSDEEQAQLKN 129
Query: 142 ILKK 145
L++
Sbjct: 130 FLER 133
>gi|15601708|ref|NP_233339.1| transcriptional regulator, MarR family [Vibrio cholerae O1 biovar
eltor str. N16961]
gi|116190932|ref|ZP_01480667.1| hypothetical protein VchoM_02000067 [Vibrio cholerae MO10]
gi|121726383|ref|ZP_01679657.1| transcriptional regulator, MarR family [Vibrio cholerae V52]
gi|153818323|ref|ZP_01970990.1| transcriptional regulator, MarR family [Vibrio cholerae NCTC 8457]
gi|153821052|ref|ZP_01973719.1| transcriptional regulator, MarR family [Vibrio cholerae B33]
gi|9658393|gb|AAF96851.1| transcriptional regulator, MarR family [Vibrio cholerae O1 biovar
eltor str. N16961]
gi|121631131|gb|EAX63506.1| transcriptional regulator, MarR family [Vibrio cholerae V52]
gi|125620008|gb|EAZ48534.1| transcriptional regulator, MarR family [Vibrio cholerae MO10]
gi|126511136|gb|EAZ73730.1| transcriptional regulator, MarR family [Vibrio cholerae NCTC 8457]
gi|126521426|gb|EAZ78649.1| transcriptional regulator, MarR family [Vibrio cholerae B33]
Length = 174
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 3 MKTLEELLEENKLDLKTMIVFRKAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGK--- 59
M+ EL E N L + + ++ R I + ++ LT +F VL TL G
Sbjct: 9 MEWANELPELNTLPMSVLHRLQRLARRIELKMEAFYQQAGLTAGEFEVLMTLRGVGHPYC 68
Query: 60 MRIQDLIDHMLATSGNMTVVIKNMVRDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQ 119
+ DL +L +SG MT + + R GL+ R DRR+ + L++ G++ IE P+
Sbjct: 69 LNPSDLQVRLLLSSGAMTNRLTRLERKGLVERNLSRYDRRNVEVTLTEAGRQRIELWLPE 128
Query: 120 HILCVKDALAILSDEDKETLISILKKY 146
+ LA S+ ++ETL + L+++
Sbjct: 129 YCDLQSSLLAKFSEVEQETLSTQLQEW 155
>gi|148264744|ref|YP_001231450.1| transcriptional regulator, MarR family [Geobacter uraniumreducens
Rf4]
gi|146398244|gb|ABQ26877.1| transcriptional regulator, MarR family [Geobacter uraniumreducens
Rf4]
Length = 137
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 66/124 (53%)
Query: 25 KAERTIRSIEQRVIKENKLTPTQFSVLETLYSKGKMRIQDLIDHMLATSGNMTVVIKNMV 84
KA + +I + + + LTP QF +L L+ + + +L M +I +
Sbjct: 14 KAYQRACAIFKEEFEGHDLTPQQFGLLGFLWQEDGLSQAELSTRSQIDRTTMGGLIDRLE 73
Query: 85 RDGLISRTSDPNDRRSYLIELSQKGQELIEEIFPQHILCVKDALAILSDEDKETLISILK 144
++GL+ R +DP+DRR+Y I L+ KG+ L +E+ + A L++++ ETL +L+
Sbjct: 74 KEGLVKRLADPDDRRAYRICLTGKGKSLEDELCAIAVRSQSRFTAALTEDELETLKELLQ 133
Query: 145 KYKN 148
K ++
Sbjct: 134 KLRS 137
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.317 0.133 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,647,969
Number of Sequences: 5470121
Number of extensions: 16618453
Number of successful extensions: 64135
Number of sequences better than 1.0e-05: 388
Number of HSP's better than 0.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 63881
Number of HSP's gapped (non-prelim): 389
length of query: 150
length of database: 1,894,087,724
effective HSP length: 113
effective length of query: 37
effective length of database: 1,275,964,051
effective search space: 47210669887
effective search space used: 47210669887
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 124 (52.4 bits)