proteins
| 19 proteins |
S | COG3254 | Uncharacterized conserved protein | Help | |
|---|---|---|---|---|---|
| 3 from | query genome Agrobacterium tumefaciens strain C58 (Cereon) (Rhizobiales | Alphaproteobacteria) | ||||
| AGc5099 AGl2037 AGl2674 | ||||
119 letters (r) 0
0 576 = ||| 1 AGl2037 (119) = -10
0 340 = ||| 5 SMb21108 (109) = -5
-11
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AGl2037
(119 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
AGl2037 226 6e-60
SMb21108 135 1e-32
BMEI1711 133 8e-32
AGc5099 126 9e-30
mll7147 114 5e-26
Cj0488 66 1e-11
Ta0744 65 3e-11
lin2978 57 5e-09
mll5702 54 6e-08
SMc03002 52 2e-07
YPO0326 50 6e-07
BS_yulD 46 1e-05
ECs4828 45 2e-05
ZyiiL 45 2e-05
yiiL 45 3e-05
AGl2674 44 8e-05
STM4043 42 2e-04
TVN0446 40 7e-04
BH0806 40 8e-04
XF2134 31 0.36
YML082w 28 2.7
mlr6968 28 3.1
YPO0024 28 3.7
Cgl2387 28 4.5
ECs4792 27 5.1
glnA 27 5.1
ZglnA 27 5.2
PA4595 27 5.7
STM4007 27 6.0
mll5301 27 7.5
Ta0103 27 8.9
YBL088c 27 8.9
# >AGl2037
# Length = 119
#
# Score = 226 bits (576), Expect = 6e-60
# Identities = 119/119 (100%), Positives = 119/119 (100%)
#
# Query: 1 MAGRPIEERSMPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPEN 60
# MAGRPIEERSMPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPEN
# Sbjct: 1 MAGRPIEERSMPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPEN 60
#
# Query: 61 LLFGYWEYTGDDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# LLFGYWEYTGDDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME
# Sbjct: 61 LLFGYWEYTGDDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
#
#
# >SMb21108
# Length = 109
#
# Score = 135 bits (340), Expect = 1e-32
# Identities = 66/107 (61%), Positives = 78/107 (72%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M RMG + L P + EYKRLHA VWPE+L I+ NITNYSIFLKEPENLLFGYWEY G
# Sbjct: 1 MQRMGMVIGLEPSKIAEYKRLHAAVWPEILALISECNITNYSIFLKEPENLLFGYWEYVG 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFH 117
# +DF ADM +MA + ++WW++C P Q P +RR EWWA M EVFH
# Sbjct: 61 EDFEADMTKMAAHPKNQEWWSVCMPCQKPLESRRQGEWWAMMEEVFH 107
#
#
# >BMEI1711
# Length = 114
#
# Score = 133 bits (334), Expect = 8e-32
# Identities = 64/105 (60%), Positives = 77/105 (72%)
#
# Query: 13 RMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTGDD 72
# RMG + L P V +YK LHA VWPE+L I+ NITNYSIFLKEPENLLFGYWEY G D
# Sbjct: 8 RMGMVIGLNPEKVAKYKALHAQVWPEILALISECNITNYSIFLKEPENLLFGYWEYVGSD 67
#
# Query: 73 FSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFH 117
# F+ADM +MA+ + ++WW++C P Q P TR+ EWWA M EVFH
# Sbjct: 68 FAADMRKMAESPKNQEWWSVCMPCQKPLETRKEGEWWAMMEEVFH 112
#
#
# >AGc5099
# Length = 113
#
# Score = 126 bits (316), Expect = 9e-30
# Identities = 61/109 (55%), Positives = 79/109 (71%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M RMG + ++P + EYKRLHA VWPEVL I+ +NI NY+IFL+EPENLLFGYWEY G
# Sbjct: 5 MQRMGMVIGVKPEMIAEYKRLHAAVWPEVLALISESNIRNYTIFLREPENLLFGYWEYHG 64
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# DFSADMA++A + ++WW+ P Q P +R+ EWWA M E FH++
# Sbjct: 65 SDFSADMAKIAASPKNQEWWSFTIPCQQPLESRKEGEWWAMMEETFHLD 113
#
#
# >mll7147
# Length = 109
#
# Score = 114 bits (284), Expect = 5e-26
# Identities = 62/109 (56%), Positives = 77/109 (69%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M RMG L L+P VEEY RLHA VWP+VL I+ NI NYSI+L+ PENLLF Y+EY G
# Sbjct: 1 MQRMGMVLGLKPEKVEEYVRLHAAVWPDVLTMISACNIKNYSIYLRRPENLLFSYFEYHG 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# D++ADMA+MA + ++WWA+C P Q P TR+ EWWA M E FH +
# Sbjct: 61 TDYAADMAKMAADPKTQEWWAVCIPCQEPLATRKEGEWWASMDEAFHYD 109
#
#
# >Cj0488
# Length = 105
#
# Score = 65.9 bits (159), Expect = 1e-11
# Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R G + ++ +EEYK LH + V + I NI NYSI+L LF Y+EY G
# Sbjct: 1 MQRYGQIIKIKKEKIEEYKELHTKPYEGVCEMIKECNIQNYSIYLF--GEYLFAYFEYIG 58
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# DF ADMA+MA+ E ++WW + +P Q+ + W M EVFH++
# Sbjct: 59 ADFEADMAKMARDESTQKWWKVTDPCQISLGY--AGQKWLNMEEVFHLD 105
#
#
# >Ta0744
# Length = 101
#
# Score = 64.7 bits (156), Expect = 3e-11
# Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
#
# Query: 13 RMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTGDD 72
# R F L L+ G+ EEY R H NVWPE+LD + RA I NYSIF+ + +FGYWE D+
# Sbjct: 2 RYAFHLRLKEGSEEEYTRRHKNVWPEMLDLLKRAGIRNYSIFIDGTD--VFGYWEC--DN 57
#
# Query: 73 FSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# SA ++ + E +W + + P R M EVF++
# Sbjct: 58 PSATLSAINNSEINSKWQTFMSDIIITPPAERTG---TGMDEVFYL 100
#
#
# >lin2978
# Length = 104
#
# Score = 57.4 bits (137), Expect = 5e-09
# Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R+ + L PG EEYK+ H +WPE+ +A+ NYSIFL+E + LF Y E
# Sbjct: 1 MERVASIMYLYPGNQEEYKKRHDELWPEMKEALKAHGAANYSIFLEEKTDTLFAYVEV-- 58
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# + A ++A+ E ++WW P+ P P + EVF++
# Sbjct: 59 -EDKAIYDKIAETEICQKWWKYMAPIMKSNPNNSPVA--VDLKEVFYL 103
#
#
# >mll5702
# Length = 105
#
# Score = 53.9 bits (128), Expect = 6e-08
# Identities = 34/107 (31%), Positives = 53/107 (48%), Gaps = 7/107 (6%)
#
# Query: 13 RMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFG-YWEYTGD 71
# + F + L+PG EYK+ H +WP ++ + +A +++YSI L E N+LFG W
# Sbjct: 4 KYAFKMKLKPGMKAEYKKRHDEIWPSLVSLLKQAGVSDYSIHLDEETNILFGVLWRRD-- 61
#
# Query: 72 DFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# MAE+ K M++WWA + P P + +FHM
# Sbjct: 62 --HHGMAELPKQPVMQRWWADMADIMETGPDNEPVA--VPLETMFHM 104
#
#
# >SMc03002
# Length = 104
#
# Score = 52.0 bits (123), Expect = 2e-07
# Identities = 29/81 (35%), Positives = 43/81 (52%), Gaps = 3/81 (3%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M + F + L PG EY+ H +WPE++ + A +++YSI L E LLFG +
# Sbjct: 1 MEKYAFRMRLHPGKAAEYQARHDAIWPELVTLLKDAGVSDYSIHLDEENCLLFGVL-WRS 59
#
# Query: 71 DDFSADMAEMAKGERMRQWWA 91
# DD M ++ MR+WWA
# Sbjct: 60 DDHR--MGDLPSHPVMRKWWA 78
#
#
# >YPO0326
# Length = 104
#
# Score = 50.4 bits (119), Expect = 6e-07
# Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R F + + P EY+R H +WPE+ + +YSIFL E NLLFG E
# Sbjct: 1 MIRKAFVMAVNPDAHAEYQRRHTPIWPELESVLKAHGAHHYSIFLDETRNLLFGVVEIES 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# ++ +A+ A+ +R WW + P P + EVF++E
# Sbjct: 61 EERWNAVAQTAECQR---WWQHMADVMPSHPDNSPVS--QALREVFYLE 104
#
#
# >BS_yulD
# Length = 104
#
# Score = 46.2 bits (108), Expect = 1e-05
# Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R + + EEYK+ H ++WPE+ +A+ +YSIFL E LF Y E
# Sbjct: 1 MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIED 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPL 96
# ++ +MA E ++WW PL
# Sbjct: 61 EE---KWRKMADTEVCQRWWKSMAPL 83
#
#
# >ECs4828
# Length = 104
#
# Score = 45.4 bits (106), Expect = 2e-05
# Identities = 30/108 (27%), Positives = 50/108 (45%), Gaps = 5/108 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R F + + P EEY+R H +WPE+ + NY+I+L + NLLF E
# Sbjct: 1 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFATVEIES 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# ++ +A E ++WW + P P +++ EVF++
# Sbjct: 61 EE---RWNAVASTEICQRWWKYMTDVMPANPDNSPVS--SELQEVFYL 103
#
#
# >ZyiiL
# Length = 104
#
# Score = 45.4 bits (106), Expect = 2e-05
# Identities = 30/108 (27%), Positives = 50/108 (45%), Gaps = 5/108 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R F + + P EEY+R H +WPE+ + NY+I+L + NLLF E
# Sbjct: 1 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFATVEIES 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# ++ +A E ++WW + P P +++ EVF++
# Sbjct: 61 EE---RWNAVASTEICQRWWKYMTDVMPANPDNSPVS--SELQEVFYL 103
#
#
# >yiiL
# Length = 104
#
# Score = 45.1 bits (105), Expect = 3e-05
# Identities = 29/108 (26%), Positives = 50/108 (45%), Gaps = 5/108 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R F + + P EEY+R H +WPE+ + NY+I+L + NLLF E
# Sbjct: 1 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIES 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# ++ +A + ++WW + P P +++ EVF++
# Sbjct: 61 EE---RWNAVASTDVCQRWWKYMTDVMPANPDNSPVS--SELQEVFYL 103
#
#
# >AGl2674
# Length = 107
#
# Score = 43.5 bits (101), Expect = 8e-05
# Identities = 29/108 (26%), Positives = 49/108 (44%), Gaps = 5/108 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# + + F + L G EYK+ H +WPE++ + A +++YSI L ++LFG
# Sbjct: 4 LEKHAFRMKLFAGKEVEYKKRHDEIWPELVALLHEAGVSDYSIHLDPETSILFGVLTRPK 63
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHM 118
# MA + + M++WWA + P P + VFH+
# Sbjct: 64 ---VHGMAALPEHPVMKKWWAHMADIMESNPDNSPVA--KDLVTVFHL 106
#
#
# >STM4043
# Length = 104
#
# Score = 42.0 bits (97), Expect = 2e-04
# Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
#
# Query: 11 MPRMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTG 70
# M R F + + EEY+R H +WPE+ + +Y+I+L + NLLF E
# Sbjct: 1 MIRKAFVMQVNADAHEEYQRRHNPIWPELEAVLKSHGAHHYAIYLDQERNLLFATVEIES 60
#
# Query: 71 DDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# ++ +A + ++WW + P P A++ EVF+++
# Sbjct: 61 EE---RWNAVASTDVCQRWWKHMRDVMPANPDNSPVS--AELKEVFYLQ 104
#
#
# >TVN0446
# Length = 100
#
# Score = 40.4 bits (93), Expect = 7e-04
# Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
#
# Query: 13 RMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTGDD 72
# R F L + EY H VW E++ + +A I NY++F+ + ++ YWEY D
# Sbjct: 2 RYFFTLKIDGTRKAEYIEKHRRVWDEMIAELKKAGIRNYTLFIDDDN--VYXYWEY--GD 57
#
# Query: 73 FSADMAEMAKGERMRQWWAICEPLQLPFPTRRPEEWWAQMTEVFHME 119
# S + + E ++W + L R + + + TEVFHM+
# Sbjct: 58 ISTVVNYLFNREIDKKWQEYMGNIIL----ERTDTFPNKFTEVFHMD 100
#
#
# >BH0806
# Length = 108
#
# Score = 40.0 bits (92), Expect = 8e-04
# Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
#
# Query: 20 LRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTGDDFSADMAE 79
# ++ +EEY +H + WPEVL +A I NYSIF +N ++ + DD A A
# Sbjct: 13 VKESCLEEYVAMHVDPWPEVLAEHTKAGIRNYSIF----QNGNQFFYCFECDDVDAAFAY 68
#
# Query: 80 MAKGERMRQW 89
# +A+ E ++W
# Sbjct: 69 IAESEVCQKW 78
#
#
# >XF2134
# Length = 793
#
# Score = 31.2 bits (69), Expect = 0.36
# Identities = 18/65 (27%), Positives = 27/65 (40%), Gaps = 7/65 (10%)
#
# Query: 47 NITNYSIFLKEPENLLFGYWEYTGDDFSADMAEMAKGERMRQWWAICEPLQLPFPTRRPE 106
# N NYS+ ++ P + G EYT + D ++ W + P+ L F T
# Sbjct: 357 NSINYSLGVESPRDFYDGALEYTQHLLNTDFTQVLD-------WGLTYPVTLSFGTEYRY 409
#
# Query: 107 EWWAQ 111
# E W Q
# Sbjct: 410 EQWNQ 414
#
#
# >YML082w
# Length = 649
#
# Score = 28.5 bits (62), Expect = 2.7
# Identities = 11/21 (52%), Positives = 16/21 (75%)
#
# Query: 59 ENLLFGYWEYTGDDFSADMAE 79
# EN+L YW+YTG+ S+ +AE
# Sbjct: 138 ENILKQYWQYTGEIISSRLAE 158
#
#
# >mlr6968
# Length = 346
#
# Score = 28.1 bits (61), Expect = 3.1
# Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
#
# Query: 13 RMGFCLNLRPGTVEEYKRLHANVWPEVLDAIARA 46
# R+G LN RP +++ KR+H+ P LD IA A
# Sbjct: 44 RLGPVLNPRPQSLDTAKRIHS---PTYLDFIASA 74
#
#
# >YPO0024
# Length = 469
#
# Score = 28.1 bits (61), Expect = 3.7
# Identities = 15/47 (31%), Positives = 23/47 (48%)
#
# Query: 17 CLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLF 63
# C L PGT++ Y R ++ D + + I + +F EPE LF
# Sbjct: 90 CDILEPGTMQGYDRDPRSISKRAEDFLKSSGIADTVLFGPEPEFFLF 136
#
#
# >Cgl2387
# Length = 456
#
# Score = 27.7 bits (60), Expect = 4.5
# Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
#
# Query: 62 LFGYWEYTGDDFSADMAEMAKG 83
# LF Y E+ GDDF DM AKG
# Sbjct: 278 LFAY-EHAGDDFQPDMITFAKG 298
#
#
# >ECs4792
# Length = 469
#
# Score = 27.3 bits (59), Expect = 5.1
# Identities = 15/47 (31%), Positives = 22/47 (45%)
#
# Query: 17 CLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLF 63
# C L PGT++ Y R ++ D + I + +F EPE LF
# Sbjct: 90 CDILEPGTLQGYDRDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLF 136
#
#
# >glnA
# Length = 469
#
# Score = 27.3 bits (59), Expect = 5.1
# Identities = 15/47 (31%), Positives = 22/47 (45%)
#
# Query: 17 CLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLF 63
# C L PGT++ Y R ++ D + I + +F EPE LF
# Sbjct: 90 CDILEPGTLQGYDRDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLF 136
#
#
# >ZglnA
# Length = 469
#
# Score = 27.3 bits (59), Expect = 5.2
# Identities = 15/47 (31%), Positives = 22/47 (45%)
#
# Query: 17 CLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLF 63
# C L PGT++ Y R ++ D + I + +F EPE LF
# Sbjct: 90 CDILEPGTLQGYDRDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLF 136
#
#
# >PA4595
# Length = 554
#
# Score = 27.3 bits (59), Expect = 5.7
# Identities = 15/53 (28%), Positives = 24/53 (44%), Gaps = 4/53 (7%)
#
# Query: 35 VWPEVLDAIARANITNYSIFLKEPENLLFGYWEYTGDDFSADMAEMAKGERMR 87
# VW +V D + I NY + P G + + G D + +++ GER R
# Sbjct: 404 VWEQVSDGFEQIKIGNYEV----PSRSYVGRFNFKGADQQKFVKDLSGGERGR 452
#
#
# >STM4007
# Length = 469
#
# Score = 27.3 bits (59), Expect = 6.0
# Identities = 15/47 (31%), Positives = 22/47 (45%)
#
# Query: 17 CLNLRPGTVEEYKRLHANVWPEVLDAIARANITNYSIFLKEPENLLF 63
# C L PGT++ Y R ++ D + I + +F EPE LF
# Sbjct: 90 CDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLF 136
#
#
# >mll5301
# Length = 315
#
# Score = 26.9 bits (58), Expect = 7.5
# Identities = 10/29 (34%), Positives = 18/29 (61%)
#
# Query: 72 DFSADMAEMAKGERMRQWWAICEPLQLPF 100
# ++ + AE+ + RQ+W+I P+ LPF
# Sbjct: 208 EYIYEAAEVDRASNWRQFWSITLPMALPF 236
#
#
# >Ta0103
# Length = 245
#
# Score = 26.6 bits (57), Expect = 8.9
# Identities = 11/18 (61%), Positives = 13/18 (72%)
#
# Query: 65 YWEYTGDDFSADMAEMAK 82
# Y Y+GDD ADMAE+ K
# Sbjct: 138 YGIYSGDDIMADMAELLK 155
#
#
# >YBL088c
# Length = 2787
#
# Score = 26.6 bits (57), Expect = 8.9
# Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
#
# Query: 38 EVLDAIARANITNYSIFLKEPENLLFGYWEYTGDDFSADMAEMAKGERMRQW 89
# E+ D + +TN S +L+GY +Y G DF + M ++ +R+ +W
# Sbjct: 533 ELSDILGPILVTNESF-------MLWGYLQYVGKDFQS-MNGISSADRIFEW 576
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.322 0.137 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,980,323
Number of Sequences: 192987
Number of extensions: 573116
Number of successful extensions: 1161
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1129
Number of HSP's gapped (non-prelim): 34
length of query: 119
length of database: 59,019,183
effective HSP length: 95
effective length of query: 24
effective length of database: 40,685,418
effective search space: 976450032
effective search space used: 976450032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
S2: 57 (26.6 bits)