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Finding cDNAs

UGID:261438     UniGene Mm.23208     Mus musculus (mouse)   Shroom4
Shroom family member 4, mRNA (cDNA clone MGC:183935 IMAGE:9087935) (Shroom4)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001035549.1 shroom family member 4 M. musculus 100.0 1474
NP_001089158.1 shroom-like protein X. laevis 59.0 217
XP_687426.3 PREDICTED: similar to shroom family member 4 D. rerio 47.1 1618
NP_001640.1 apical protein of Xenopus-like H. sapiens 47.0 1605

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; pancreas; extraembryonic tissue; skin; heart; kidney; mixed; eye; ovary; lung; uncharacterized tissue; mammary gland; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: X A1.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK052602.1 Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630003C04 product:unclassifiable, full insert sequence
AK052531.1 Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430043L16 product:similar to SHAP-A (FRAGMENT) [Homo sapiens], full insert sequence P
AK173129.1 Mus musculus mRNA for mKIAA1202 protein P
DQ435687.1 Mus musculus strain BALB/c KIAA1202 mRNA, complete cds P
DQ435686.1 Mus musculus strain C57BL/6J KIAA1202 mRNA, complete cds P
NM_001040459.1 Mus musculus shroom family member 4 (Shroom4), mRNA P
BC151022.1 Mus musculus shroom family member 4, mRNA (cDNA clone MGC:183935 IMAGE:9087935), complete cds P

EST sequences (10 of 36) [Show all sequences]

BY187865.1 Clone F630226J07 uncharacterized tissue 5' read P
BY360845.1 Clone 6820412B15 embryonic tissue 3' read A
CB519650.1 Clone IMAGE:6839071 brain 5' read P
CF173089.1 Clone NIA:B0918D09_IMAGE:30473996 ovary 5' read
CF733920.1 Clone IMAGE:30615993 eye 5' read P
CK633702.1 Clone IMAGE:30638414 embryonic tissue 5' read
CN676878.1 Clone NIA:A0987C06_IMAGE:30775133 embryonic tissue 5' read P
CN686562.1 Clone NIA:E0226H03_IMAGE:30851894 embryonic tissue 5' read P
CO044287.1 Clone IMAGE:30615993 eye 3' read A
BP755081.1 Clone mia20043 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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