Generate a Cluster Image

Cell subset:
Selected Cells
ME:LOXIMVI ME:MALME-3M ME:SK-MEL-2 ME:SK-MEL-5
ME:SK-MEL-28 LC:NCI-H23 ME:M14 ME:UACC-62
LC:NCI-H522 LC:A549/ATCC LC:EKVX LC:NCI-H322M
LC:NCI-H460 LC:HOP-62 LC:HOP-92 CNS:SNB-19
CNS:SNB-75 CNS:U251 CNS:SF-268 CNS:SF-295
CNS:SF-539 CO:HT29 CO:HCC-2998 CO:HCT-116
CO:SW-620 CO:HCT-15 CO:KM12 OV:OVCAR-3
OV:OVCAR-4 OV:OVCAR-8 OV:IGROV1 OV:SK-OV-3
LE:CCRF-CEM LE:K-562 LE:MOLT-4 LE:SR
RE:UO-31 RE:SN12C RE:A498 RE:CAKI-1
RE:RXF-393 RE:786-0 RE:ACHN RE:TK-10
ME:UACC-257 LC:NCI-H226 CO:COLO205 OV:OVCAR-5
LE:HL-60 LE:RPMI-8226 BR:MCF7 BR:MCF7/ADF-RES
PR:PC-3 PR:DU-145 BR:MDA-MB-231/ATCC BR:HS578T
BR:MDA-MB-435 BR:MDA-N BR:BT-549 BR:T-47D
Data type:
Delta type:
Apply second delta to drug vectors only:
Randomize before clustering:
Cluster method:
For threshold correlation, these will be applied to the x-axis data only Proportion to keep:
Threshold level:
X-axis data:
Activity (122) Stanford - unconfirmed (1657) Bigdata genes - W (2412)
Negative activity (122) Stanford - confirmed (1077) Bigdata genes - I (2765)
Target (41) Stanford - pending confirmation (470) Bigdata genes - R (1016)
Log Target (41) Kahuna genes (1555) Bigdata genes - E (632)
Median Averaged Drugs (5084) Bigdata genes - D (290)
Selected Median Averaged Drugs (118) Bigdata genes - blank (5014)
Bigdata genes - U (1225)
Bigdata genes - A (1375)

Add'l NSCs (X):

Add'l Target IDs (X):

Add'l Stanford IDs (X):

Add'l Kahuna IDs (X):

Add'l Bigdata IDs (X):

Add'l Median Averaged Drugs (X):
Y-axis data: (do not combine cells with other data!)
Cells:
Activity (122) Stanford - unconfirmed (1657) Bigdata genes - W (2412)
Negative activity (122) Stanford - confirmed (1077) Bigdata genes - I (2765)
Target (41) Stanford - pending confirmation (470) Bigdata genes - R (1016)
Log Target (41) Kahuna genes (1555) Bigdata genes - E (632)
Median Averaged Drugs (5084) Bigdata genes - D (290)
Selected Median Averaged Drugs (118) Bigdata genes - blank (5014)
Bigdata genes - U (1225)
Bigdata genes - A (1375)

Add'l NSCs (Y):

Add'l Target IDs (Y):

Add'l Stanford IDs (Y):

Add'l Kahuna IDs (Y):

Add'l Bigdata IDs (Y):

Add'l Median Averaged Drugs (Y):
Display type:
Cluster distance for X-axis:
Cluster distance for Y-axis:
A proportion of the categories may be removed due to low variance over the cell set. If median activity drugs were chosen, the size of the data set (of best data quality) can also be specified. Proportion from X-axis:
Proportion from Y-axis:
Number of median activity drugs:
Image type: Save Directory:

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