Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss746726	SC_JCM|AC025471.3_90948		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	07/27/00	10/10/03	83	Genomic			unknown
ss1156993	KWOK|OVLP-000804-486524		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	09/02/00	10/10/03	123	Genomic			99 %
ss1157945	KWOK|OVLP-000804-489583		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	09/02/00	10/10/03	86	Genomic			99 %
ss1159729	KWOK|OVLP-000804-497774		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	09/02/00	10/10/03	123	Genomic			99 %
ss1428231	TSC-CSHL|TSC0289280		rev/B	C/T	tgtcttactggtggagagcttgtgtcaaaa	cttagtgatacaaaaataagtgtttatttc	06/14/01	10/10/03	123	Genomic			unknown
ss1936236	KWOK|OVLP-000925-739252		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	10/06/00	10/10/03	87	Genomic			99 %
ss1936936	KWOK|OVLP-000925-743477		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	10/06/00	10/25/06	123	Genomic			99 %
ss3326022	TSC-CSHL|TSC1524942		rev/B	C/T	tatgtcttacggtggagagctgtgtcaaaa	cttagtgatacaaaaataagtgtttatttc	09/20/01	10/10/03	123	Genomic			unknown
ss5358829	TSC-CSHL|TSC1524939		rev/B	C/T	tgtcttactggtggagagcttgtgtcaaaa	cttagtgatacaaaaataagtgtttatttc	09/20/02	10/10/03	123	Genomic			unknown
ss5358978	TSC-CSHL|TSC1524549		rev/B	C/T	tgtcttactggtggagagcttgtgtcaaaa	cttagtgatacaaaaataagtgtttatttc	09/20/02	10/10/03	123	Genomic			unknown
ss23434733	PERLEGEN|afd4353904		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	08/10/04	09/13/04	123	Genomic			unknown
ss42635977	ABI|hCV1008548		fwd/T	A/G	gaaataaacacttatttttgtatcactaag	ttttgacacaagctctccaccagtaagaca	07/18/05	07/18/05	126	Genomic			unknown

Fasta sequence   (Legend)

 GCCTGTCCCA CCAAAATACC TTTCATGAAA AATGCTATGG CCTTAAAGTT CTAATATAGG
 GTCAAAAATT AGACCTATTA ATTTGAATAT GAGAAAAAAG aaaaaaacat tatatatttg
 atttattttt ttaaaCACCT TATTCCTCAT GATAAATTAA AATTTTTGTC CCAATCCTTT
 ACCCATCTCT GCATGTACAC CCTTGCCATG ACCTCATCAC CGGCAAAGta tacttccctc
 cctagtggct ttgtgcttgg ccatgtgact tactttaagc caatggcatg tagttgagag
 tgacagtggg ccagttcaaa gcaTGGGAAT GAAGAGGCCT CATTCATTGC TTTTGCTTTC
 GTGTATTTGT GCCATTGCCT TGAAAAGGGC TTCTAATGGG TAGCTGCTGC CCCTTCAACC
 TGGCTATCCC AGTGATCCCA GTGAAAAGCA GAACCACCCA GCTGTTGCAG CTTGAGGTGA
 AGCTCCCAGT GAAGCCCAGC CTTGTGAGAA ATAAACACTT ATAtctccct ctccctctcc
 ctctccctct ccctctccgt ctccctctcc gtctccctct cccctttcca tggtctcccc
 tctccctctc tttccacggt ctccctctca tgccgagcgg cagctggact gtactgccgc
 catcttggct cactgcagcc tccctgcctg attctcctgc ctcagcctgc cgagtgcctg
 cgattgcagg cgcgcaccgc cacgcctgac tggttttcgt atttttttgg tggagacggg
 gtttcgctgt gttggccggg ctggtctcca gctcctaacc gcgagtgatc cgccagcctt
 ggcctcctga gttgccggga ttgcagacag agtctcgtta actcagtgct caatggtgcc
 caggctggag tgcagtggcg tgatctcggc tcgctgcagc ctccacctcc cagccgcctg
 ccttggcccc ccaaagtgcc gagattgcag cctctgcccg gccgccaccc cgtctgggaa
 gtgaggagcg tctctgcctg gccgcccatc gtctgggatg tgaggagccc ctctgcctgg
 ctgcccagtc tggaaagtga ggagcctctc tgcccggccg ccatcccacc taggaagtga
 ggagcgcctc ttcccggccg ccatcccatc taggaagtga ggagcgtctc tgcccagcgg
 cccatcatct gagatgtggg gagcgcctca gccctgccgc cccgtctggg atgtgagaag
 cgcctctgcc cggccgcaac cccgtctggg aggagaggag cgtctctgcc cggccgcccc
 atctgagaag tgaggagacc ctctgcctgg caaccgcccc gtctgagaag tgaggagccc
 ctccgcccgg cagccgcccc gtctgagaag tgaggagccc ctccgcctgg ctgacacccc
 atctgggaag tgaggagcgt ctctgccagg cagccacccc gtccgggagg gaggtggggg
 ggtcagcccc ccgcccggcc agctgccccg tctgggaggt gaggggcgcc tctgcctggc
 cacccctact gggaagtgag gagcccctct gcccggccag ccgcccagtc cgggagggag
 gtggggcggt cagccccccg cctggccagc caccccgtcc gggaggtgag gggcgcctct
 gcccggccgc ccctactggg aagtgaggag cccctctgcc cggccgccac cccatctggg
 aggtgtgccc agcagctcat tgagaacggg ccatgatggc aatggcagtt ttgtggaata
 gaaaaagggg aaaggtgggg aaaagattga gaaatcagat ggttgctctg tctgtgtaga
 aagaagtaga catgggagac ttttcatttt gttctgtact aagaaaaatt cttctgcctt
 gggaAAAAAA AAAAAAAGAA ATAAACACTT ATTTTTGTAT CACTAAG
 R
 TTTTGACACA AGCTCTCCAC CAGTAAGACA TAAAATACTG GAAGCAAATG ACCTGGGTTG
 TTTCTTAAAC AAGATCTCAG CTACATTTTC TTTATATGAT AGTGAACTAC ATATCTGGTG
 TGGCTACTTT AACAGAGACA TTGTACCTCT TTATTTTCAG TGAACAATGA AATCAACTTT
 TGTTTATATT GATGATTAGC

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_006576->NM_001737 sv function
HuRef	NW_001838933->NM_001737 sv function
Celera	NW_922596->NM_001737 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss1936936	HapMap-CEU	European	120	IG			1.000			1.000
	HapMap-HCB	Asian	88	IG			1.000			1.000
	HapMap-JPT	Asian	82	IG			1.000			1.000
	HapMap-YRI	Sub-Saharan African	110	IG	0.091	0.200	0.709	0.010	0.191	0.809
ss23434733	AFD_EUR_PANEL	European	48	IG			1.000			1.000
	AFD_AFR_PANEL	African American	44	IG	0.136	0.227	0.636	0.100	0.250	0.750
	AFD_CHN_PANEL	Asian	46	IG			1.000			1.000

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN